CmaCh10G003560 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G003560
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Homeobox-leucine zipper protein
Location	Cma_Chr10: 1650067 .. 1651123 (-)
RNA-Seq Expression	CmaCh10G003560
Synteny	CmaCh10G003560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCTCCAAATCCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAACCGCCATGGGAGACCAAGATGAGCTCTGCAACACCAGGCTTGGCCTTGCTTTAGGATTTGGCGATTATGTTCCAAAAACGATGCAGAAAGCCAACAAACAGCCCAAGTTCTTGTCTGACCTCTCTTTCTCTCTCATTCCAAGACAGGAATCCGCCATTAACATGCAGCTTCAAGCTAATGAACCCTCCAAGGATTCCTCCTTTGGAATTACTAGAGATCGGTCATCCACTAATTATAATTGCAACGCCATTAGTGGTGGATTAGAAAGAGACAGAAAAAAGCTTAGGCTTTCCCAAGAACAGCTCACTTTGCTTGAAGAAACCTTCAAACTTCACACCACCTTGAATCTGGTAACCCTTAATTATTATTTCCACAACCCATTTCACCCTTTTTCCTTCTTTTCATTTTTCTTAAATACCCATCAAATTTTCTTACGAAAAATTTAAACTTTTCTCTGTTTTTGCATGGATTTGCAGGCCCAGAAACTGGCACTTGCCGATCAATTAAACCTCAAATCTCGACAAGTGGAAGTTTGGTTTCAAAACAGGCGTGCAAGGTTAGTTATGTCGAGGATTATCGGGAGATTAGATATGTTTATAGCTAAATAATATATCTCCATCGATATGAAATTTTTTGGAAAAACACCTGAATGAGAGCTTAAATTCAAAGTGGACAATATCATAGTATTGTAGATGGTCGGGGTTCTTAAATTTTTTAAAAATTTAGCTATGGATTCAAATGTTTTTTTTTATGGAACAGGTCGAAATTGAAACAAACGGAAGTAGATTGTGAGTTCTTGAAGAAATATTGCGAAAGGCTGAAGGAAGAGAATGGAAGGTTGAAGAAAGAGTTGCAGGAATTAAGATCCAGAAAAATTGGAGCTTCACAATTGTATATTCAGCTACCCAAGGCGGCGACGCTCACAATTTGTCCCTCATGCGACAAAACTACGAGGCCGGTCGCCGCCGTGGAGGCCCATTCTCCGCCACAATAATTTTCATTTTTCC

mRNA sequence

TCTTCTCCAAATCCCATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAACCGCCATGGGAGACCAAGATGAGCTCTGCAACACCAGGCTTGGCCTTGCTTTAGGATTTGGCGATTATGTTCCAAAAACGATGCAGAAAGCCAACAAACAGCCCAAGTTCTTGTCTGACCTCTCTTTCTCTCTCATTCCAAGACAGGAATCCGCCATTAACATGCAGCTTCAAGCTAATGAACCCTCCAAGGATTCCTCCTTTGGAATTACTAGAGATCGGTCATCCACTAATTATAATTGCAACGCCATTAGTGGTGGATTAGAAAGAGACAGAAAAAAGCTTAGGCTTTCCCAAGAACAGCTCACTTTGCTTGAAGAAACCTTCAAACTTCACACCACCTTGAATCTGGCCCAGAAACTGGCACTTGCCGATCAATTAAACCTCAAATCTCGACAAGTGGAAGTTTGGTTTCAAAACAGGCGTGCAAGGTCGAAATTGAAACAAACGGAAGTAGATTGTGAGTTCTTGAAGAAATATTGCGAAAGGCTGAAGGAAGAGAATGGAAGGTTGAAGAAAGAGTTGCAGGAATTAAGATCCAGAAAAATTGGAGCTTCACAATTGTATATTCAGCTACCCAAGGCGGCGACGCTCACAATTTGTCCCTCATGCGACAAAACTACGAGGCCGGTCGCCGCCGTGGAGGCCCATTCTCCGCCACAATAATTTTCATTTTTCC

Coding sequence (CDS)

ATGGGAGACCAAGATGAGCTCTGCAACACCAGGCTTGGCCTTGCTTTAGGATTTGGCGATTATGTTCCAAAAACGATGCAGAAAGCCAACAAACAGCCCAAGTTCTTGTCTGACCTCTCTTTCTCTCTCATTCCAAGACAGGAATCCGCCATTAACATGCAGCTTCAAGCTAATGAACCCTCCAAGGATTCCTCCTTTGGAATTACTAGAGATCGGTCATCCACTAATTATAATTGCAACGCCATTAGTGGTGGATTAGAAAGAGACAGAAAAAAGCTTAGGCTTTCCCAAGAACAGCTCACTTTGCTTGAAGAAACCTTCAAACTTCACACCACCTTGAATCTGGCCCAGAAACTGGCACTTGCCGATCAATTAAACCTCAAATCTCGACAAGTGGAAGTTTGGTTTCAAAACAGGCGTGCAAGGTCGAAATTGAAACAAACGGAAGTAGATTGTGAGTTCTTGAAGAAATATTGCGAAAGGCTGAAGGAAGAGAATGGAAGGTTGAAGAAAGAGTTGCAGGAATTAAGATCCAGAAAAATTGGAGCTTCACAATTGTATATTCAGCTACCCAAGGCGGCGACGCTCACAATTTGTCCCTCATGCGACAAAACTACGAGGCCGGTCGCCGCCGTGGAGGCCCATTCTCCGCCACAATAA

Protein sequence

MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEPSKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRKIGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ

Homology

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BLAST of CmaCh10G003560 vs. ExPASy Swiss-Prot
Match: P92953 (Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana OX=3702 GN=ATHB-4 PE=1 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 2.3e-34
Identity = 79/131 (60.31%), Postives = 101/131 (77.10%), Query Frame = 0


Query: 84  GGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARS 143
           G  +  RKKLRLS++Q  +LEETFK H+TLN  QKLALA QLNL++RQVEVWFQNRRAR+
Sbjct: 156 GNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRART 215

Query: 144 KLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRKIGASQLYIQLPKAATLTICPSCD 203
           KLKQTEVDCE+LK+ C+ L EEN RL+KE+ ELR+ K+ +  LY+ +    TLT+CPSC+
Sbjct: 216 KLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKL-SPHLYMHMTPPTTLTMCPSCE 275

Query: 204 KTTRPVAAVEA 215
           + +   A V A
Sbjct: 276 RVSSSAATVTA 285

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BLAST of CmaCh10G003560 vs. ExPASy Swiss-Prot
Match: P46602 (Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana OX=3702 GN=HAT3 PE=1 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-33
Identity = 76/120 (63.33%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 85  GLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSK 144
           G +  RKKLRLS+EQ  +LEETFK H+TLN  QK+ALA QLNL++RQVEVWFQNRRAR+K
Sbjct: 156 GDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTK 215

Query: 145 LKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRKIGASQLYIQLPKAATLTICPSCDK 204
           LKQTEVDCE+LK+ CE L +EN RL+KE+ ELR+ K+ +  LY+ +    TLT+CPSC++
Sbjct: 216 LKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKL-SPHLYMHMKPPTTLTMCPSCER 274

[Close]

BLAST of CmaCh10G003560 vs. ExPASy Swiss-Prot
Match: P46604 (Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana OX=3702 GN=HAT22 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.3e-33
Identity = 77/115 (66.96%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 90  RKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSKLKQTE 149
           RKKLRL+++Q  LLE+ FKLH+TLN  QK ALA QLNL+ RQVEVWFQNRRAR+KLKQTE
Sbjct: 125 RKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTE 184

Query: 150 VDCEFLKKYCERLKEENGRLKKELQELRSRKIGASQLYIQLPKAATLTICPSCDK 205
           VDCEFLKK CE L +EN RL+KELQ+L++ K+ +   Y+ +P AATLT+CPSC++
Sbjct: 185 VDCEFLKKCCETLTDENRRLQKELQDLKALKL-SQPFYMHMP-AATLTMCPSCER 237

[Close]

BLAST of CmaCh10G003560 vs. ExPASy Swiss-Prot
Match: Q05466 (Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana OX=3702 GN=HAT4 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.3e-33
Identity = 79/133 (59.40%), Postives = 100/133 (75.19%), Query Frame = 0


Query: 87  ERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSKLK 146
           +  RKKLRLS++Q  +LEETFK H+TLN  QK ALA QL L++RQVEVWFQNRRAR+KLK
Sbjct: 125 DNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLK 184

Query: 147 QTEVDCEFLKKYCERLKEENGRLKKELQELRSRKIGASQLYIQLPKAATLTICPSCDKTT 206
           QTEVDCEFL++ CE L EEN RL+KE+ ELR+ K+ + Q Y+ +    TLT+CPSC+  +
Sbjct: 185 QTEVDCEFLRRCCENLTEENRRLQKEVTELRALKL-SPQFYMHMSPPTTLTMCPSCEHVS 244

Query: 207 ----RPVAAVEAH 216
               +P AA  AH
Sbjct: 245 VPPPQPQAATSAH 256

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BLAST of CmaCh10G003560 vs. ExPASy Swiss-Prot
Match: Q01I23 (Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica OX=39946 GN=HOX17 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.3e-33
Identity = 73/122 (59.84%), Postives = 95/122 (77.87%), Query Frame = 0


Query: 85  GLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSK 144
           G++  RKKLRLS++Q  +LE++F+ H TLN  QK  LA QL L+ RQVEVWFQNRRAR+K
Sbjct: 76  GIDGSRKKLRLSKDQSAVLEDSFREHPTLNPRQKATLAQQLGLRPRQVEVWFQNRRARTK 135

Query: 145 LKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRKIGASQLYIQLPKAATLTICPSCDK 204
           LKQTEVDCEFLK+ CE L EEN RL+KE+QELR+ K+ +  LY+ +    TLT+CPSC++
Sbjct: 136 LKQTEVDCEFLKRCCETLTEENRRLQKEVQELRALKLVSPHLYMNMSPPTTLTMCPSCER 195

Query: 205 TT 207
            +
Sbjct: 196 VS 197

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BLAST of CmaCh10G003560 vs. ExPASy TrEMBL
Match: A0A6J1JA40 (homeobox-leucine zipper protein ATHB-4-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484923 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60
           MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP
Sbjct: 1   MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60

Query: 61  SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120
           SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA
Sbjct: 61  SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120

Query: 121 LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK 180
           LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK
Sbjct: 121 LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK 180

Query: 181 IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 220
           IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ
Sbjct: 181 IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 219

[Close]

BLAST of CmaCh10G003560 vs. ExPASy TrEMBL
Match: A0A6J1E158 (homeobox-leucine zipper protein ATHB-4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429651 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.8e-111
Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60
           MGDQDELCNTRLGLALGFGDYVPK MQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP
Sbjct: 1   MGDQDELCNTRLGLALGFGDYVPKKMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60

Query: 61  SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120
           SKDSSFGI+RDRSSTNYNCNAISGGLER+RKKLRLSQEQLTLLEETFKLHTTLNLAQKLA
Sbjct: 61  SKDSSFGISRDRSSTNYNCNAISGGLERERKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120

Query: 121 LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK 180
           LA QLNLK+RQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRS K
Sbjct: 121 LAQQLNLKARQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSTK 180

Query: 181 IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 220
           +GASQLYIQLPKAATLTICPSCDKTTRP AAVEAHSPPQ
Sbjct: 181 LGASQLYIQLPKAATLTICPSCDKTTRPAAAVEAHSPPQ 219

[Close]

BLAST of CmaCh10G003560 vs. ExPASy TrEMBL
Match: A0A6J1JIM4 (homeobox-leucine zipper protein ATHB-4-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484923 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.2e-83
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 53  MQLQANEPSKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTT 112
           MQLQANEPSKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTT
Sbjct: 1   MQLQANEPSKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTT 60

Query: 113 LNLAQKLALADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKE 172
           LNLAQKLALADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKE
Sbjct: 61  LNLAQKLALADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKE 120

Query: 173 LQELRSRKIGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 220
           LQELRSRKIGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ
Sbjct: 121 LQELRSRKIGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 167

[Close]

BLAST of CmaCh10G003560 vs. ExPASy TrEMBL
Match: A0A6J1E3Q0 (homeobox-leucine zipper protein ATHB-4-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429651 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.9e-80
Identity = 160/167 (95.81%), Postives = 164/167 (98.20%), Query Frame = 0


Query: 53  MQLQANEPSKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTT 112
           MQLQANEPSKDSSFGI+RDRSSTNYNCNAISGGLER+RKKLRLSQEQLTLLEETFKLHTT
Sbjct: 1   MQLQANEPSKDSSFGISRDRSSTNYNCNAISGGLERERKKLRLSQEQLTLLEETFKLHTT 60

Query: 113 LNLAQKLALADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKE 172
           LNLAQKLALA QLNLK+RQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKE
Sbjct: 61  LNLAQKLALAQQLNLKARQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKE 120

Query: 173 LQELRSRKIGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 220
           LQELRS K+GASQLYIQLPKAATLTICPSCDKTTRP AAVEAHSPPQ
Sbjct: 121 LQELRSTKLGASQLYIQLPKAATLTICPSCDKTTRPAAAVEAHSPPQ 167

[Close]

BLAST of CmaCh10G003560 vs. ExPASy TrEMBL
Match: A0A6J1EUD1 (homeobox-leucine zipper protein HAT3-like OS=Cucurbita moschata OX=3662 GN=LOC111437643 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 6.8e-66
Identity = 152/226 (67.26%), Postives = 168/226 (74.34%), Query Frame = 0


Query: 1   MGDQDELCNTRLGLAL--GFGDYVPKTMQKAN---KQPKFLSDLSFSLIPRQESAINMQL 60
           MGDQD+LCN RLGL+L  GFG+YVPK MQK N     PK  +DLSF+L+P+QE AIN   
Sbjct: 1   MGDQDDLCNIRLGLSLGSGFGEYVPKKMQKINSNHNNPKSCTDLSFTLVPKQELAIN--- 60

Query: 61  QANEPSKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNL 120
                            SST    N++    ER+RKKLRLS+EQ TLLEE+FKLHTTLN 
Sbjct: 61  -----------------SST--TTNSLGSERERERKKLRLSKEQATLLEESFKLHTTLNP 120

Query: 121 AQKLALADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQE 180
           AQK ALA QLNLK+RQVEVWFQNRRAR+KLKQTEVDCEFLKK CERL EEN RLKKEL E
Sbjct: 121 AQKQALAHQLNLKTRQVEVWFQNRRARTKLKQTEVDCEFLKKCCERLNEENRRLKKELHE 180

Query: 181 LRSRKIGASQLYIQLPKAATLTICPSCDKTTRPV---AAVEAHSPP 219
           LRS K+GASQLYIQLPKAATLTICPSCDK TR     AA E +SPP
Sbjct: 181 LRSIKLGASQLYIQLPKAATLTICPSCDKITRTPAANAAAEPNSPP 204

[Close]

BLAST of CmaCh10G003560 vs. NCBI nr
Match: XP_022987342.1 (homeobox-leucine zipper protein ATHB-4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 425.2 bits (1092), Expect = 3.3e-115
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 1   MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60
           MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP
Sbjct: 1   MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60

Query: 61  SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120
           SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA
Sbjct: 61  SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120

Query: 121 LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK 180
           LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK
Sbjct: 121 LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK 180

Query: 181 IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 220
           IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ
Sbjct: 181 IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 219

[Close]

BLAST of CmaCh10G003560 vs. NCBI nr
Match: XP_022921356.1 (homeobox-leucine zipper protein ATHB-4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 411.8 bits (1057), Expect = 3.8e-111
Identity = 211/219 (96.35%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60
           MGDQDELCNTRLGLALGFGDYVPK MQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP
Sbjct: 1   MGDQDELCNTRLGLALGFGDYVPKKMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60

Query: 61  SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120
           SKDSSFGI+RDRSSTNYNCNAISGGLER+RKKLRLSQEQLTLLEETFKLHTTLNLAQKLA
Sbjct: 61  SKDSSFGISRDRSSTNYNCNAISGGLERERKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120

Query: 121 LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK 180
           LA QLNLK+RQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRS K
Sbjct: 121 LAQQLNLKARQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSTK 180

Query: 181 IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 220
           +GASQLYIQLPKAATLTICPSCDKTTRP AAVEAHSPPQ
Sbjct: 181 LGASQLYIQLPKAATLTICPSCDKTTRPAAAVEAHSPPQ 219

[Close]

BLAST of CmaCh10G003560 vs. NCBI nr
Match: KAG7023351.1 (Homeobox-leucine zipper protein HAT4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 210/219 (95.89%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60
           MGDQDELCNTRLGLALGFGDYVPK MQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP
Sbjct: 1   MGDQDELCNTRLGLALGFGDYVPKKMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60

Query: 61  SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120
           SKDSSFGI+RDRSSTNYNCNAISGGLER+RKKLRLSQEQLTLLEETFKLHTTLNLAQKLA
Sbjct: 61  SKDSSFGISRDRSSTNYNCNAISGGLERERKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120

Query: 121 LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK 180
           LA QLNLK+RQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRS K
Sbjct: 121 LAHQLNLKARQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSTK 180

Query: 181 IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 220
           +GASQLYIQLPKAATLTICPSCD+TTRP AAVEAHSPPQ
Sbjct: 181 LGASQLYIQLPKAATLTICPSCDETTRPAAAVEAHSPPQ 219

[Close]

BLAST of CmaCh10G003560 vs. NCBI nr
Match: XP_023515381.1 (homeobox-leucine zipper protein ATHB-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 210/219 (95.89%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 1   MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60
           MGDQDELCNTRLGLALGFGDYVPK MQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP
Sbjct: 1   MGDQDELCNTRLGLALGFGDYVPKKMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60

Query: 61  SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120
           SKDSSFGI+RDRSST+YNCNAISGGLER+RKKLRLSQEQLTLLEETFKLHTTLNLAQKLA
Sbjct: 61  SKDSSFGISRDRSSTDYNCNAISGGLERERKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120

Query: 121 LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK 180
           LA QLNLK+RQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRS K
Sbjct: 121 LAQQLNLKARQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSTK 180

Query: 181 IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 220
           +GASQLYIQLPKAATLTICPSCDKTTRP AAVEAHSPPQ
Sbjct: 181 LGASQLYIQLPKAATLTICPSCDKTTRPAAAVEAHSPPQ 219

[Close]

BLAST of CmaCh10G003560 vs. NCBI nr
Match: KAG6589670.1 (Homeobox-leucine zipper protein HAT2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 407.9 bits (1047), Expect = 5.5e-110
Identity = 210/219 (95.89%), Postives = 214/219 (97.72%), Query Frame = 0


Query: 1   MGDQDELCNTRLGLALGFGDYVPKTMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60
           MGDQDELCNTRLGLALGFGDYVPK MQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP
Sbjct: 1   MGDQDELCNTRLGLALGFGDYVPKKMQKANKQPKFLSDLSFSLIPRQESAINMQLQANEP 60

Query: 61  SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120
           SKDSSFGI+RDRSSTNYNCNAISGGLER+RKKLRLSQEQLTLLEETFKLHTTLNLAQKLA
Sbjct: 61  SKDSSFGISRDRSSTNYNCNAISGGLERERKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120

Query: 121 LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK 180
           LA QLNLK+RQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRS K
Sbjct: 121 LAQQLNLKARQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSTK 180

Query: 181 IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHSPPQ 220
           +GASQLYIQLPKAATLTICPSCDKTTRP AAVEAHSP Q
Sbjct: 181 LGASQLYIQLPKAATLTICPSCDKTTRPAAAVEAHSPLQ 219

[Close]

BLAST of CmaCh10G003560 vs. TAIR 10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4 )

HSP 1 Score: 147.1 bits (370), Expect = 1.6e-35
Identity = 79/131 (60.31%), Postives = 101/131 (77.10%), Query Frame = 0


Query: 84  GGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARS 143
           G  +  RKKLRLS++Q  +LEETFK H+TLN  QKLALA QLNL++RQVEVWFQNRRAR+
Sbjct: 156 GNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAKQLNLRARQVEVWFQNRRART 215

Query: 144 KLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRKIGASQLYIQLPKAATLTICPSCD 203
           KLKQTEVDCE+LK+ C+ L EEN RL+KE+ ELR+ K+ +  LY+ +    TLT+CPSC+
Sbjct: 216 KLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKL-SPHLYMHMTPPTTLTMCPSCE 275

Query: 204 KTTRPVAAVEA 215
           + +   A V A
Sbjct: 276 RVSSSAATVTA 285

[Close]

BLAST of CmaCh10G003560 vs. TAIR 10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3 )

HSP 1 Score: 144.8 bits (364), Expect = 8.1e-35
Identity = 76/120 (63.33%), Postives = 97/120 (80.83%), Query Frame = 0


Query: 85  GLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSK 144
           G +  RKKLRLS+EQ  +LEETFK H+TLN  QK+ALA QLNL++RQVEVWFQNRRAR+K
Sbjct: 156 GDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAKQLNLRTRQVEVWFQNRRARTK 215

Query: 145 LKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRKIGASQLYIQLPKAATLTICPSCDK 204
           LKQTEVDCE+LK+ CE L +EN RL+KE+ ELR+ K+ +  LY+ +    TLT+CPSC++
Sbjct: 216 LKQTEVDCEYLKRCCENLTDENRRLQKEVSELRALKL-SPHLYMHMKPPTTLTMCPSCER 274

[Close]

BLAST of CmaCh10G003560 vs. TAIR 10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-34
Identity = 77/115 (66.96%), Postives = 96/115 (83.48%), Query Frame = 0


Query: 90  RKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSKLKQTE 149
           RKKLRL+++Q  LLE+ FKLH+TLN  QK ALA QLNL+ RQVEVWFQNRRAR+KLKQTE
Sbjct: 125 RKKLRLTKQQSALLEDNFKLHSTLNPKQKQALARQLNLRPRQVEVWFQNRRARTKLKQTE 184

Query: 150 VDCEFLKKYCERLKEENGRLKKELQELRSRKIGASQLYIQLPKAATLTICPSCDK 205
           VDCEFLKK CE L +EN RL+KELQ+L++ K+ +   Y+ +P AATLT+CPSC++
Sbjct: 185 VDCEFLKKCCETLTDENRRLQKELQDLKALKL-SQPFYMHMP-AATLTMCPSCER 237

[Close]

BLAST of CmaCh10G003560 vs. TAIR 10
Match: AT4G16780.1 (homeobox protein 2 )

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-34
Identity = 79/133 (59.40%), Postives = 100/133 (75.19%), Query Frame = 0


Query: 87  ERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLALADQLNLKSRQVEVWFQNRRARSKLK 146
           +  RKKLRLS++Q  +LEETFK H+TLN  QK ALA QL L++RQVEVWFQNRRAR+KLK
Sbjct: 125 DNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAKQLGLRARQVEVWFQNRRARTKLK 184

Query: 147 QTEVDCEFLKKYCERLKEENGRLKKELQELRSRKIGASQLYIQLPKAATLTICPSCDKTT 206
           QTEVDCEFL++ CE L EEN RL+KE+ ELR+ K+ + Q Y+ +    TLT+CPSC+  +
Sbjct: 185 QTEVDCEFLRRCCENLTEENRRLQKEVTELRALKL-SPQFYMHMSPPTTLTMCPSCEHVS 244

Query: 207 ----RPVAAVEAH 216
               +P AA  AH
Sbjct: 245 VPPPQPQAATSAH 256

[Close]

BLAST of CmaCh10G003560 vs. TAIR 10
Match: AT5G47370.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein )

HSP 1 Score: 142.5 bits (358), Expect = 4.0e-34
Identity = 84/156 (53.85%), Postives = 105/156 (67.31%), Query Frame = 0


Query: 61  SKDSSFGITRDRSSTNYNCNAISGGLERDRKKLRLSQEQLTLLEETFKLHTTLNLAQKLA 120
           S D    IT DR  +    +    G E  RKKLRLS++Q   LEETFK H TLN  QKLA
Sbjct: 100 SGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLA 159

Query: 121 LADQLNLKSRQVEVWFQNRRARSKLKQTEVDCEFLKKYCERLKEENGRLKKELQELRSRK 180
           LA +LNL +RQVEVWFQNRRAR+KLKQTEVDCE+LK+  E+L EEN RL+KE  ELR+ K
Sbjct: 160 LAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLK 219

Query: 181 IGASQLYIQLPKAATLTICPSCDKTTRPVAAVEAHS 217
           + + Q Y Q+    TL +CPSC++   P ++   H+
Sbjct: 220 L-SPQFYGQMTPPTTLIMCPSCERVGGPSSSNHHHN 254

The following BLAST results are available for this feature:

BLAST of CmaCh10G003560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P92953	2.3e-34	60.31	Homeobox-leucine zipper protein ATHB-4 OS=Arabidopsis thaliana OX=3702 GN=ATHB-4...	[more]
P46602	1.1e-33	63.33	Homeobox-leucine zipper protein HAT3 OS=Arabidopsis thaliana OX=3702 GN=HAT3 PE=...	[more]
P46604	3.3e-33	66.96	Homeobox-leucine zipper protein HAT22 OS=Arabidopsis thaliana OX=3702 GN=HAT22 P...	[more]
Q05466	3.3e-33	59.40	Homeobox-leucine zipper protein HAT4 OS=Arabidopsis thaliana OX=3702 GN=HAT4 PE=...	[more]
Q01I23	3.3e-33	59.84	Homeobox-leucine zipper protein HOX17 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]

BLAST of CmaCh10G003560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA40	1.6e-115	100.00	homeobox-leucine zipper protein ATHB-4-like isoform X1 OS=Cucurbita maxima OX=36...	[more]
A0A6J1E158	1.8e-111	96.35	homeobox-leucine zipper protein ATHB-4-like isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1JIM4	1.2e-83	100.00	homeobox-leucine zipper protein ATHB-4-like isoform X2 OS=Cucurbita maxima OX=36...	[more]
A0A6J1E3Q0	2.9e-80	95.81	homeobox-leucine zipper protein ATHB-4-like isoform X2 OS=Cucurbita moschata OX=...	[more]
A0A6J1EUD1	6.8e-66	67.26	homeobox-leucine zipper protein HAT3-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of CmaCh10G003560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022987342.1	3.3e-115	100.00	homeobox-leucine zipper protein ATHB-4-like isoform X1 [Cucurbita maxima]	[more]
XP_022921356.1	3.8e-111	96.35	homeobox-leucine zipper protein ATHB-4-like isoform X1 [Cucurbita moschata]	[more]
KAG7023351.1	1.4e-110	95.89	Homeobox-leucine zipper protein HAT4, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_023515381.1	1.4e-110	95.89	homeobox-leucine zipper protein ATHB-4-like [Cucurbita pepo subsp. pepo]	[more]
KAG6589670.1	5.5e-110	95.89	Homeobox-leucine zipper protein HAT2, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of CmaCh10G003560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44910.1	1.6e-35	60.31	homeobox-leucine zipper protein 4	[more]
AT3G60390.1	8.1e-35	63.33	homeobox-leucine zipper protein 3	[more]
AT4G37790.1	2.3e-34	66.96	Homeobox-leucine zipper protein family	[more]
AT4G16780.1	2.3e-34	59.40	homeobox protein 2	[more]
AT5G47370.1	4.0e-34	53.85	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 145..179
None	No IPR available	COILS	Coil	Coil	coord: 86..106
None	No IPR available	GENE3D	1.10.10.60		coord: 83..151 e-value: 1.4E-17 score: 65.0
None	No IPR available	PANTHER	PTHR45714	FAMILY NOT NAMED	coord: 70..206
None	No IPR available	PANTHER	PTHR45714:SF34	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT9	coord: 70..206
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 88..150 e-value: 4.7E-14 score: 62.7
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 90..144 e-value: 5.7E-16 score: 58.1
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 86..146 score: 16.989294
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 90..147 e-value: 2.54949E-13 score: 60.72
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 146..189 e-value: 5.5E-16 score: 69.1
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 146..179 e-value: 8.4E-9 score: 35.5
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 121..144
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 75..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G003560.1	CmaCh10G003560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding