CmaCh10G001450 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G001450
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	LIM domain-containing protein WLIM1-like
Location	Cma_Chr10: 656570 .. 663263 (-)
RNA-Seq Expression	CmaCh10G001450
Synteny	CmaCh10G001450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTATTAATCTCACTGTCACATATGCTCTCTTTTCTTTCTCGCATATTGTGGAACAATGGCGTTTTTGCTCACCAAAACCGCTCTTGCGTCTCACTTCCGATCTCAATCTCAGGTTCTTTCTCATTCAATCGCCTCTTTGTTTCTCTTTTTTAATCGTTTTTTCGTTCTCTCGCTCAATCTTTTGAGTTTTTGGTTGACGGGTAGGTGGATCCTTCGTCACCCTCGCGCCGTGGATTCCACGTCGAACCAGGGGCTCGTGAAAAGGCTGTAAGCATATCTAACTTCTTGTTATTTTCTATCTTTAATTGCCAGTGTAGTGGTCTACTCCATCGTTTGGACATTTAGTTCCTTATAGCTTACCGCTGCTCCATTAAGTTAATTGATATCTCGTATGATTGTCAATCTAGTTCATTTCGCTTTATCGTTGTTCAATCTTTCGACGCCATTATAGATGGAAGCTTTTCGAATCTGTTCAGATCAAACTGCTTGAACTCCTGTATTTAGGTCCATGAAATTAGAGGGAAGGTTTCCGTGTTGTTTTCTACACTAATCTGTCGCCATGCTATGCCATGAAACCCTGGTGAAATCTGTTAAGTTCCTTATATTGGTGTATGTTGCGGGTTTGCTTTGCATGCGTGTTCTCAAACTCCGCAAGAATAGTTTCTACTCCAATATTGAACTATTTTCGAAAATATTTATCACTTACATCTCACGAAGGACTTTCCAATACTTGGCTCACCTCTTGCATTTTGTTGATGCAGTTTAGTTGCTTAGTATGTGATTGCAATGATTTATTGTTGAATTGAGTTTCATTATGTTGAAATCTGGCAGTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCTCTCGAATCAAACAAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGTATTAGTCTTTTTTGCACTAATAAAAATACTTATCTCTTCGTCCCGTGGGTCCTAGCTCTGTCATTTACCATTATCGCAACATTGATATAAAATATGTGCGGTTGAATCTTTTGGATGATGTATGTTTCTATACCGATACAAGTTTGTCAAATTTTTACAAGCTTTTTTGAGGTGAAAATTGGCTTCATAGACTTCGAATGAAAACAAGCATATTGCATATGCTAACTTAGAAGGTAAAATAATGCTACCGAAATGGAAGATTGGGGTAGCGGCTGTATTTATGGTTTGTTTTTAGTAGTCTCACCGGGTATCAGTGACTGCAAAAGAAGGACCTTGAGATTCAAATGTAGAACAACGTGATCTTTGTTCAAATAAACGCTAATGCTCAAGTTGATTGAAATTGAAGACCACCTCTGAACTCCATCATATTCACCAACTAAACAGTCAACTCTGTGTTTCCAGAGTTTGATACAACAATATTATTAGATTAGTTTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTAAGGAATTGGGCTTTCATTGATAAGAAGAGAGCATTAAAAAAAACAGGCCACAAAAAAGGGAAGAGGAGTCCCAACTAACTACAAAAAGAGCTCCAATCCAATAAAATCAAGCCAGGATCATAATTACAAAAGAGTCTGTTGATAGACACCCACAAAGAGGCTTAAACCGAGCTCCCTACCTCTCCTCACTGGATCTTCCAACCTCTCTAAAAATCCTATTATTTCCCTCAAGCCAAATACTCAAAACAATAGCAAAAAAGCTCTCTTGCCGCAACATAAGGCCACGCTCACGAAAGAGCGAACTCAAAAGGACTTCCTTAATCACAGAGAAACAAACTCTCCACACCGAAGGTCCTCAACCATCTAGTCCAACTAGACTGCGCAAAGTTAATAATGCTAGAGCCCTCATCCCCAAAAGAATTCATGTCTTTGTTTATATTCAACAAGGGCTAACAATGCTTCTCTATCATTCTAACTTCTCCCAAAATGACAATTCAAATTAGTTGAAAATGAACGTTTTACTTGTTAATTCAGTGAAGGAGCAATCAATTTTGAGTTCTTCACATGTGCATCGGGCTATGTTAAGTGAATTGGCATGTTGCCAAGAAACGTAATTGATTTCTTTTCTTTTTATTTAAATTTCTACAATGTTGCCATCATCTTTTTATTTTATTTTATTTTTTTATTAAGAAACAAAACATTTATTATCGAAAGGGATATAGAAAAAGATGGGAGAGATGCGATTTATCCACACACCGAGTATCTGTCCAGCTTGGCCAATGAAAACATCTTTGAACTTTATTATTGGTTCAATTCAATGCCCTCTTACTTTAATTCAATGACCGAGAAGGACGGGCACTTGACTAAGCAGATTTGGAAGACGAGAACTCCTTGTACCCTAGTCTACAAGAACATCAACACTCAAAAAAGTATTTAAAAGGAAAACCCACTCTACGTGCTATACCCCCAAGTATGCCAAAACTAGTCTCTTCTATGAAGAGACCTTTGATAATGTTTTTAATTTTCCAGCTACTTTTCTCTAGCAGATTATTGGTTTCAGTTATGTAATATGTTCAACATAGAATGGTGCTTCCAAAAAGATCCAATTATACTTCCTGAGATTATTTTGATTTAGTGGTTAAGTGGAAAGCAAAGATTATTGGTAATGAAGGCTTCATGAGCTATTTGTGGGTCATTGGGCTATAAAGAAATGACAGAATTTCAAACCACATTCATAGAAATTCTAGAGAAATTTGAGAGAATGTAAGGCTACAGAGCCTTCCTTTGGTCGAAGTCTTACAAATGTTTTGATAATTTATCTTCTTTCGTCAAGAGGACTCTTTTTCTTCATCTCTTCATGCCTGATAGTGGGAAGAATATCTCTCTGTGTCTGTTTAGTTCCTTTGGAATGAAATTTTTTCGTCCTGAAGAAAAGAAAAACTTTAAGCCTTGTCATTATATTTATTTTCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCGAAGGCAGCTAGCGAAAGTACATGATGGAATTTGTATCCAGTGACTATTAAAATGTCTCACAAAGGTTTTTAATGCTTTCAGCTAAATAAAGGTTTTGAAGCACCCAATTCTGTTTCCCCCATTTCCTGTAGGCTGGTTTTAATCCTCAATAATTTCTTCTTTTACATGATACTTGGTAACATCTCGAGGTTTCGAAGCTTAACATTGCCTGCTTTTACGCTCGAAATAGAACGTACATGGTGGGGGATGGGATTTTTAATTTACCCATAAAACTTATTCTGAACTTGCTTTGTAGGTCAGTGTTTCTTTTTCATGTGGCTGAAATCGTTTGAAGAGAAGGAAACTAAAAAAATAAATTGGAAATACAAGTAAGATTGGCTGGTGTTTGTTATTGACACGATTTGAAGTATAAATAATGCTTTTATTTATTTGTTGGTATCATTATTTAAACGCATGCATATACCCAGTGGATTAGGTGGTTTTCTTTTATATTTTTTTAGTGGGGGGGGTTGATTTTCTTTTTTATAATATTCATTAAAAACATTTAAAGCGGAAAAGAAAGGGAATAATTCGAATTTATTGTAGTCTTATTTATATTGGTGAGGACAACAAGGATGGTGGGTGGGACAGATCAATTCAATCGCTCTTCCAAGTCGGCGCCTAAAAAGGAGAATGAGAAAAGATGTAAAGCTAAATTGAAAAGAAAAAAAGGCCCAACAAAACAATCACAGTATTGAAATTGTTCCATTTCCACTTAAAATGTTGCGTGAAGAAGAAAAAACTGTATACAATGTAAATGTAAATGATGGAATAAACGATCGATCGCCTAACGTTTGTATCCTAATGTAAAAAAAAGAAAAGAAATCATTCCGGATCGAATTTTCCCCTAAAGAAAAGAGCTCGAGAATAGATATTGAATTTGGCACAATAATTAGTTCGAAGACTTGGTTATACATCAAATCATGAAATCATACAAATAAAAATGTGTATAGTATTTCTTGTATATGCATTTCTTATCTGTCACACATTTGCTTATGCAAAGACATTGAATTTTTTTTTATTTTTTTTTTAATTGAAAAAGTCTTCATCTTTCATCATTACTCTGCTTGATCTAACTATATTCTATATTTCATTCTACAGATCATCTTTCAGCTTTGTAACTGAGCCGACCATTTCCCATTAAAATAAACTTGGTTCTGTTACTTCCATGGCTGTGCTGAAACATAACGTATATGGTCATAAAATTGCATTAAACCCATCATTAATCCACTTCTTGGGACATATTTTCGCTTTATGTGATCAAATAAGGAGATGACACGTGTAAAATGAAGTAGTTAATGGGTGTCTAGATGGGGAATTATGTTGGTCAAATTTTCAAATTGCTCATTACTGGAAATTTGTCAGCTTGTTCGAATGTGCCTGAGCTGTAATCTCTGACTCTAAGAGGGAAATTTGCCGGACACTTAGACGACATAAAAAGGAGGAAGGAAAGATCTTCTGCCTCTTCTTCTTCCCTTCCCTTCCCTTCCCTTCCCTTCTTCTCAGCTTGGCAGTTCAGTTCATTTCTGTTCTGTTCTGTTCATATTCTTCCTTGAATCCTAAAGATTTTTTGAAGATGGCGTTTTTAGGGACAACCCAAAAGTGCAAGGCCTGTGACAAAACTGTTTACTTGGTTGATCAGCTCACTGCTGATAACAAAATCTACCACAAGGCCTGTTTCAGGTGCTACCATTGCAAGAGCACTCTAAAGGTAACTCTTTTGAATCTTACACACATATATTCCTTTCTTATATGGATCTTCCTTCAGATGAGAGCCTTGTTGTGAATGGAATAGATGCATGCTGCTCAAGATATGCCTATTTCCAGATCCTATCCATCATATTCAGTATCTCAAACTGATATAAAATGATCCTATTTCCAATTCTATCTGCACTTTTGGCTAAAATTTTCATGTTGTAATAGTTAAATGATTCCCGTATCTCATAACTATCTGATTCCACTTGAGTCTGTCTTTATATCTTATTCGACAATGAATTTTGCTACCTTAGATTTTGTATGTGTTTGAGATTCTGCAGTGTACAAGGATCATGGTTTATCTTTTAAGATCATAACCTTTTGATCGAAGAGATATTTCTTAATTAGTAGAGCTATGTTTAGGTTAGCTTGGTGCCCATCGCTCGAACATTATCACCAATACTGATTCTGTTGTTTTTTTATGTCACTGCAGTTGTTCAATTACTCCTCCTTTGAAGGTGTATTATATTGCAAACCTCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTGGAAAAAAGTTTTGAAGGTAATTGGTTGTTGTTGAGTCTTTTTCCGCCTTCAATGACTTCTGCTTGTTTAGTCTATTATCTTCTTCTTTCTTCTCTTTAGGTACTCCAAGAACCATTAGAACAGACAGATCTACCAATCAGGTTTTCTTTTCTTTATTCACTTTTTGGAAGCTTATCTGCTAAAATCAATACTTATGCTCTGATTCCTAACTACTAGTTGTTGTTATTAACATTTGAAAGGTCCAATCCAACAGCAAAGTGTCGAGTTTATTTGCTGGAACTCAAGATAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTAAATGGCCATTATACAGTTTAAAAGCCTCTAGTTTTTTACTTTCTTCCTGTGGCTATTCTTTGAATCATTCACTCAAGTTCTCATCAAATTTACAACCTAAACATTCAAATGCTAAAAGGGTACAAAACCTTCCTATTTACCTGTTTTTCTCGAGAGAGAATCAACTTTATCATGCAAAAGGAAGAGCTACAGTTCAAGAAATTTCCTTATAATACAACCCGAAACAGTATGATACATTTGGAAATTACGAACTAGGATAGTTGAATGTTGTCCTAAACTAGCTTTCTTTTCATCCCTTCGTGTTGCGTTGATTCAGACTCGAACTTAACCACCCTACTTTTGGAGATGACGGTCTCCTTGATCTAAGGCAATGGAATCTTTGAAGAACTTCTTAACCTTTTAATGGAGGATATAATGTGCTAACCAATCGAGTGATGCTCAAATTGCGCTAAAACTAGTTGGCTTAATTTTAAGAGATGCTGTTTTTTTTTTCTTCCATCAGGTGGCAGTAGATAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGATGTGTGATTAGCCCATCAAACTACATAGCACACGAACATCGACTGTACTGTAGGCATCATCACAACCAACTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGGAGTGACTGAGAACACACCAGTTGAGAAGAACTTGATGTTGGATGCAACTGTTATATTGTGCATGAGGAACAGATAAAGTTACGTTTTTCATCAATACTTGCGGGTTCGGGTTTGCTATTCTTTAGTGTACTAGAAGAAAAATTTGAGTTTCAATAAATTTTTTGAGTGTGAGCTGAAAACCTTCCATAAGCACTGCAGAAATATGAGATGTACTGTTCTTCTATTCAATTGAGACTATAAGCTATTTTCATTTTTCCATCAACAAGTTTGTTTGTTTGTTGTTGTATGTGAAGTGAATGCTTTGTTTCAGATGATCATAACTTTAAATCACATTTAAACATGCAGAAAG

mRNA sequence

TTCTTATTAATCTCACTGTCACATATGCTCTCTTTTCTTTCTCGCATATTGTGGAACAATGGCGTTTTTGCTCACCAAAACCGCTCTTGCGTCTCACTTCCGATCTCAATCTCAGGTGGATCCTTCGTCACCCTCGCGCCGTGGATTCCACGTCGAACCAGGGGCTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCTCTCGAATCAAACAAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCGAAGGCAGCTAGCGAAAATTTTTTGAAGATGGCGTTTTTAGGGACAACCCAAAAGTGCAAGGCCTGTGACAAAACTGTTTACTTGGTTGATCAGCTCACTGCTGATAACAAAATCTACCACAAGGCCTGTTTCAGGTGCTACCATTGCAAGAGCACTCTAAAGTTGTTCAATTACTCCTCCTTTGAAGGTGTATTATATTGCAAACCTCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTGGAAAAAAGTTTTGAAGGTACTCCAAGAACCATTAGAACAGACAGATCTACCAATCAGGTCCAATCCAACAGCAAAGTGTCGAGTTTATTTGCTGGAACTCAAGATAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTGGCAGTAGATAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGATGTGTGATTAGCCCATCAAACTACATAGCACACGAACATCGACTGTACTGTAGGCATCATCACAACCAACTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGGAGTGACTGAGAACACACCAGTTGAGAAGAACTTGATGTTGGATGCAACTGTTATATTGTGCATGAGGAACAGATAAAGTTACGTTTTTCATCAATACTTGCGGGTTCGGGTTTGCTATTCTTTAGTGTACTAGAAGAAAAATTTGAGTTTCAATAAATTTTTTGAGTGTGAGCTGAAAACCTTCCATAAGCACTGCAGAAATATGAGATGTACTGTTCTTCTATTCAATTGAGACTATAAGCTATTTTCATTTTTCCATCAACAAGTTTGTTTGTTTGTTGTTGTATGTGAAGTGAATGCTTTGTTTCAGATGATCATAACTTTAAATCACATTTAAACATGCAGAAAG

Coding sequence (CDS)

ATGGCGTTTTTGCTCACCAAAACCGCTCTTGCGTCTCACTTCCGATCTCAATCTCAGGTGGATCCTTCGTCACCCTCGCGCCGTGGATTCCACGTCGAACCAGGGGCTCGTGAAAAGGCTTTATTAGCTGAGGACCCTTCTCTAAGGCGGTTCAGATCACACAAGAAAGGTGTCTCTCGAATCAAACAAATTGGAGATGTTCTGACAATCGTAGTTGTTGCAGGATGTTGCTATGAAATCTATGTGAAAGCAACCATGCGAGAAGAAGCTCGGCAGGCGAAGGCAGCTAGCGAAAATTTTTTGAAGATGGCGTTTTTAGGGACAACCCAAAAGTGCAAGGCCTGTGACAAAACTGTTTACTTGGTTGATCAGCTCACTGCTGATAACAAAATCTACCACAAGGCCTGTTTCAGGTGCTACCATTGCAAGAGCACTCTAAAGTTGTTCAATTACTCCTCCTTTGAAGGTGTATTATATTGCAAACCTCACTTTGATCAGTTGTTCAAGATGACTGGAAGCTTGGAAAAAAGTTTTGAAGGTACTCCAAGAACCATTAGAACAGACAGATCTACCAATCAGGTCCAATCCAACAGCAAAGTGTCGAGTTTATTTGCTGGAACTCAAGATAAATGTGTTACTTGCAAGAAAACTGTTTATCCAATTGAGAAGGTGGCAGTAGATAGTAAATCATACCACAGAGCTTGCTTCAGGTGCTCACATGGAGGATGTGTGATTAGCCCATCAAACTACATAGCACACGAACATCGACTGTACTGTAGGCATCATCACAACCAACTCTTCAAACAGAAGGGGAATTTCAGCCAACTTGACAAGCATGAAGAGATTAAAGGGAGTGACTGA

Protein sequence

MAFLLTKTALASHFRSQSQVDPSSPSRRGFHVEPGAREKALLAEDPSLRRFRSHKKGVSRIKQIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASENFLKMAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD

Homology

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BLAST of CmaCh10G001450 vs. ExPASy Swiss-Prot
Match: Q94JX5 (LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 3.6e-72
Identity = 126/185 (68.11%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           MAF GTTQKC ACDKTVYLVD+LTADN++YHKACFRC+HCK TLKL NY+SFEGVLYC+P
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRS-TNQVQSNSKVSSLFAGTQDKCVTCKKTVYPI 222
           HFDQ FK TGSLEKSFEGTP+  + DR    +  + +KVS++F GT++KCV C KTVYPI
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 223 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 282
           EKV+V+   YH++CF+C+HGGC ISPSNYIAHE +LYC+HHH QL K+KGN SQL+   E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 283 IKGSD 287
               D
Sbjct: 181 NAAKD 185

[Close]

BLAST of CmaCh10G001450 vs. ExPASy Swiss-Prot
Match: P29675 (Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.4e-68
Identity = 116/179 (64.80%), Postives = 144/179 (80.45%), Query Frame = 0


Query: 104 AFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPH 163
           +F GTTQKC  C+KTVYLVD+L A+ ++YHKACFRC+HC STLKL N++SF+GV+YC+ H
Sbjct: 3   SFTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHH 62

Query: 164 FDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEK 223
           FDQLFK TGSLEKSF+GTP+       + + QS +++SS F GT+DKC  C K VYPIE+
Sbjct: 63  FDQLFKRTGSLEKSFDGTPKFKPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIER 122

Query: 224 VAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 283
           V VD  +YHRACF+C HGGC ISPSNYIAHE RLYC+HHH QLFK+KGN+SQL+  E +
Sbjct: 123 VKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVEETV 181

[Close]

BLAST of CmaCh10G001450 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 1.6e-59
Identity = 109/184 (59.24%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           M+F GT QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 222
           HF+QLFK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 223 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 282
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 283 IKGS 286
           IK S
Sbjct: 181 IKRS 182

[Close]

BLAST of CmaCh10G001450 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-59
Identity = 108/182 (59.34%), Postives = 142/182 (78.02%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           M+F GT QKC+AC+KTVY V+ L+AD   YHKACF+C HCKS L+L NYSS EGV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 222
           HF+QLFK +GS  K+F+ +P    TD+ T ++ ++ S+++ +F+GTQDKC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFSKNFQ-SPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI 120

Query: 223 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 282
           EKV V+S+ YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 283 IK 284
           IK
Sbjct: 181 IK 181

[Close]

BLAST of CmaCh10G001450 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.7e-53
Identity = 95/174 (54.60%), Postives = 127/174 (72.99%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           M+F GT  KCKACDKTVY++D LT +   YHK+CFRC HCK TL + NYSS +GVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 222
           HF+QLFK +G+  K+F+        D  T   ++ SK+SS F+GTQDKC TCKKTVYP+E
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHLT---RTPSKLSSFFSGTQDKCATCKKTVYPLE 120

Query: 223 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQL 277
           KV ++ +SYH+ CFRC+H GC ++ S+Y +    LYC+ H NQLF +KG+++ +
Sbjct: 121 KVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHV 171

[Close]

BLAST of CmaCh10G001450 vs. ExPASy TrEMBL
Match: A0A314V1K9 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_23032 PE=4 SV=1)

HSP 1 Score: 442.2 bits (1136), Expect = 1.7e-120
Identity = 220/287 (76.66%), Postives = 246/287 (85.71%), Query Frame = 0


Query: 1   MAFLLTKTALASHFRSQS---QVDPSSPSRRGFHVEPGAREKALLAEDPSLRRFRSHKKG 60
           MAFLL + ++ SHF+S S   Q D  S SRR FHVEPG REKALLAEDPSL+RF+SHKKG
Sbjct: 1   MAFLL-RNSITSHFQSHSQRAQNDSLSQSRRQFHVEPGPREKALLAEDPSLKRFKSHKKG 60

Query: 61  VSRIKQIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASENFLKMAFLGTTQKCKACDK 120
           V+RIK++GDVLT+VVVA CCYEIYV+A MREEAR+   AS         GTTQKCKAC+K
Sbjct: 61  VARIKRLGDVLTVVVVASCCYEIYVRAVMREEARKQAGAS---------GTTQKCKACEK 120

Query: 121 TVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKS 180
           TVYLVDQLTADNK+YHKACFRC+HCK TLKL NYSSFEGVLYCKPHFDQLFKMTGSL+KS
Sbjct: 121 TVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHFDQLFKMTGSLDKS 180

Query: 181 FEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFR 240
           FEG P+T+R DRS  +  +NSKVSSLFAGTQDKCV CKKTVYPIEKVAVD  SYH+ CFR
Sbjct: 181 FEGIPKTVR-DRS--EQVNNSKVSSLFAGTQDKCVACKKTVYPIEKVAVDGTSYHKPCFR 240

Query: 241 CSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKG 285
           CSHGGCVISPSNY+AHEHRLYCRHHH+QLFK+KGNFSQL K EE++G
Sbjct: 241 CSHGGCVISPSNYVAHEHRLYCRHHHSQLFKEKGNFSQLSKQEEVQG 274

[Close]

BLAST of CmaCh10G001450 vs. ExPASy TrEMBL
Match: A0A6J1JLG7 (LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC111485663 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.8e-104
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP
Sbjct: 1   MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 222
           HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE
Sbjct: 61  HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 120

Query: 223 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 282
           KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI
Sbjct: 121 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 180

Query: 283 KGSD 287
           KGSD
Sbjct: 181 KGSD 184

[Close]

BLAST of CmaCh10G001450 vs. ExPASy TrEMBL
Match: A0A6J1E4K3 (LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111429864 PE=4 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 2.8e-104
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP
Sbjct: 1   MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 222
           HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE
Sbjct: 61  HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIE 120

Query: 223 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 282
           KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI
Sbjct: 121 KVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEI 180

Query: 283 KGSD 287
           KGSD
Sbjct: 181 KGSD 184

[Close]

BLAST of CmaCh10G001450 vs. ExPASy TrEMBL
Match: A0A0A0LNY7 (Pollen-specific protein SF3 OS=Cucumis sativus OX=3659 GN=Csa_1G005660 PE=4 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 7.0e-103
Identity = 179/186 (96.24%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 101 LKMAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYC 160
           +KMAFLGTTQKCKACDKTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 161 KPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 220
           KPHFDQLFKMTGSLEKSFE TPRT+RTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEATPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120

Query: 221 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 280
           IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 281 EIKGSD 287
           EIKGSD
Sbjct: 181 EIKGSD 186

[Close]

BLAST of CmaCh10G001450 vs. ExPASy TrEMBL
Match: A0A1S3BVF2 (LIM domain-containing protein WLIM1-like OS=Cucumis melo OX=3656 GN=LOC103493931 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.6e-102
Identity = 179/186 (96.24%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 101 LKMAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYC 160
           +KMAFLGTTQKCKACDKTVYLVDQLTADNK+YHKACFRC+HCKSTLKLFNYSSFEGVLYC
Sbjct: 1   MKMAFLGTTQKCKACDKTVYLVDQLTADNKVYHKACFRCHHCKSTLKLFNYSSFEGVLYC 60

Query: 161 KPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYP 220
           KPHFDQLFKMTGSLEKSFEGTPRT+RTDRSTNQVQ+NSK+SSLFAGTQDKCVTCKKTVYP
Sbjct: 61  KPHFDQLFKMTGSLEKSFEGTPRTVRTDRSTNQVQTNSKLSSLFAGTQDKCVTCKKTVYP 120

Query: 221 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 280
           IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE
Sbjct: 121 IEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 180

Query: 281 EIKGSD 287
           EIK SD
Sbjct: 181 EIKVSD 186

[Close]

BLAST of CmaCh10G001450 vs. NCBI nr
Match: KAG6589465.1 (LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 552.7 bits (1423), Expect = 1.8e-153
Identity = 273/286 (95.45%), Postives = 276/286 (96.50%), Query Frame = 0


Query: 1   MAFLLTKTALASHFRSQSQVDPSSPSRRGFHVEPGAREKALLAEDPSLRRFRSHKKGVSR 60
           MAFLLTKT+LASHFRSQSQVDPSSPSRRGFHVEPG REKALLAEDPSLRRFRSHKKGV+R
Sbjct: 1   MAFLLTKTSLASHFRSQSQVDPSSPSRRGFHVEPGTREKALLAEDPSLRRFRSHKKGVAR 60

Query: 61  IKQIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASENFLKMAFLGTTQKCKACDKTVY 120
           IK+IGDVLTIVVVAGCCYEIYVKATMREEARQAKAASE         TTQKCKACDKTVY
Sbjct: 61  IKKIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASER--------TTQKCKACDKTVY 120

Query: 121 LVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEG 180
           LVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEG
Sbjct: 121 LVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKSFEG 180

Query: 181 TPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSH 240
           TPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSH
Sbjct: 181 TPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFRCSH 240

Query: 241 GGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 287
           GGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD
Sbjct: 241 GGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKGSD 278

[Close]

BLAST of CmaCh10G001450 vs. NCBI nr
Match: PQM43126.1 (hypothetical protein Pyn_23032 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 442.2 bits (1136), Expect = 3.4e-120
Identity = 220/287 (76.66%), Postives = 246/287 (85.71%), Query Frame = 0


Query: 1   MAFLLTKTALASHFRSQS---QVDPSSPSRRGFHVEPGAREKALLAEDPSLRRFRSHKKG 60
           MAFLL + ++ SHF+S S   Q D  S SRR FHVEPG REKALLAEDPSL+RF+SHKKG
Sbjct: 1   MAFLL-RNSITSHFQSHSQRAQNDSLSQSRRQFHVEPGPREKALLAEDPSLKRFKSHKKG 60

Query: 61  VSRIKQIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASENFLKMAFLGTTQKCKACDK 120
           V+RIK++GDVLT+VVVA CCYEIYV+A MREEAR+   AS         GTTQKCKAC+K
Sbjct: 61  VARIKRLGDVLTVVVVASCCYEIYVRAVMREEARKQAGAS---------GTTQKCKACEK 120

Query: 121 TVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEKS 180
           TVYLVDQLTADNK+YHKACFRC+HCK TLKL NYSSFEGVLYCKPHFDQLFKMTGSL+KS
Sbjct: 121 TVYLVDQLTADNKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHFDQLFKMTGSLDKS 180

Query: 181 FEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACFR 240
           FEG P+T+R DRS  +  +NSKVSSLFAGTQDKCV CKKTVYPIEKVAVD  SYH+ CFR
Sbjct: 181 FEGIPKTVR-DRS--EQVNNSKVSSLFAGTQDKCVACKKTVYPIEKVAVDGTSYHKPCFR 240

Query: 241 CSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKG 285
           CSHGGCVISPSNY+AHEHRLYCRHHH+QLFK+KGNFSQL K EE++G
Sbjct: 241 CSHGGCVISPSNYVAHEHRLYCRHHHSQLFKEKGNFSQLSKQEEVQG 274

[Close]

BLAST of CmaCh10G001450 vs. NCBI nr
Match: KAF9667830.1 (hypothetical protein SADUNF_Sadunf15G0064100 [Salix dunnii])

HSP 1 Score: 435.6 bits (1119), Expect = 3.2e-118
Identity = 215/284 (75.70%), Postives = 242/284 (85.21%), Query Frame = 0


Query: 1   MAFLL--TKTALASHFRSQSQ--VDPSSPSRRGFHVEPGAREKALLAEDPSLRRFRSHKK 60
           MAFLL    ++++SHFRS+SQ   D  S SRRGFHVEPG REKALLA DP+L+ F+SHKK
Sbjct: 41  MAFLLKNCSSSISSHFRSKSQKTQDALSISRRGFHVEPGPREKALLAADPALKWFKSHKK 100

Query: 61  GVSRIKQIGDVLTIVVVAGCCYEIYVKATMREEARQAKAASENFLKMAFLGTTQKCKACD 120
            V R+K+ GDVLTI+VVAGCCYEIYVKA MREEAR          K A   TTQKCKAC+
Sbjct: 101 SVWRLKRAGDVLTILVVAGCCYEIYVKAVMREEAR----------KEAKKRTTQKCKACE 160

Query: 121 KTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHFDQLFKMTGSLEK 180
           KTVYLVDQLTAD+K+YHKACFRC+HCK TLKL NYSSFEGVLYCKPHFDQLFKMTGSL+K
Sbjct: 161 KTVYLVDQLTADDKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCKPHFDQLFKMTGSLDK 220

Query: 181 SFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKVAVDSKSYHRACF 240
           SFEGT +T+R DRS +QV  NSKVSS+FAGTQ+KCV CKKTVYPIEKVAVD  SYHRACF
Sbjct: 221 SFEGTRKTVRGDRSADQVLGNSKVSSMFAGTQEKCVACKKTVYPIEKVAVDGTSYHRACF 280

Query: 241 RCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHE 281
           RC+HGGC+ISPSN++AH+HRLYCRHHHNQLFK+KGNFSQL KHE
Sbjct: 281 RCAHGGCIISPSNFVAHDHRLYCRHHHNQLFKEKGNFSQLGKHE 314

[Close]

BLAST of CmaCh10G001450 vs. NCBI nr
Match: KAG5046276.1 (hypothetical protein JHK86_015682 [Glycine max] >KAG5148775.1 hypothetical protein JHK82_015656 [Glycine max])

HSP 1 Score: 406.4 bits (1043), Expect = 2.1e-109
Identity = 209/300 (69.67%), Postives = 239/300 (79.67%), Query Frame = 0


Query: 1   MAFLLTKTALASHFRSQSQVDPSSPS--RRGFHVEPGAREKALLAEDPSLRRFRSHKKGV 60
           MAFL  KT++ASHFRS SQ      S  RR FHVEPGAREKALLAED +L+ F+S+KK V
Sbjct: 1   MAFLWNKTSIASHFRSHSQKTEGLASFPRRRFHVEPGAREKALLAEDATLKPFKSYKKSV 60

Query: 61  SRIKQIGDVLTIVVVAG--------CCYEIYVKAT--MREEARQAKAASENFLKM---AF 120
            ++++IG+ LT+VVVAG         C  +    T  M E  ++ K  + N LK+   A 
Sbjct: 61  KQLRKIGNALTVVVVAGPVCDRVNSVCLALKDAVTKYMSELLQERKLRNCNVLKVLDEAN 120

Query: 121 LG-TTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKPHF 180
           +G TTQKCKAC+KTVYLVDQLTADNKIYHK+CFRCYHCK TLKL NY SFEGVLYCKPHF
Sbjct: 121 IGRTTQKCKACEKTVYLVDQLTADNKIYHKSCFRCYHCKGTLKLSNYCSFEGVLYCKPHF 180

Query: 181 DQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKTVYPIEKV 240
           DQLFK TGSL+KSFEG PRT R +RST+QVQ+NSKVS+LFAGTQ+KCV CKKTVYPIEKV
Sbjct: 181 DQLFKKTGSLDKSFEGIPRTARLERSTDQVQTNSKVSNLFAGTQEKCVACKKTVYPIEKV 240

Query: 241 AVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEEIKG 285
           AVD  SYH+ACFRC+HGGCVISPSNY+AHEHRLYCRHHH QLFKQKGNFSQLDK E  +G
Sbjct: 241 AVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLYCRHHHTQLFKQKGNFSQLDKQENDEG 300

[Close]

BLAST of CmaCh10G001450 vs. NCBI nr
Match: KAG7023149.1 (LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 394.8 bits (1013), Expect = 6.3e-106
Identity = 187/189 (98.94%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 98  ENFLKMAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGV 157
           ++FLKMAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGV
Sbjct: 38  KDFLKMAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGV 97

Query: 158 LYCKPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKT 217
           LYCKPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKT
Sbjct: 98  LYCKPHFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQVQSNSKVSSLFAGTQDKCVTCKKT 157

Query: 218 VYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLD 277
           VYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLD
Sbjct: 158 VYPIEKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLD 217

Query: 278 KHEEIKGSD 287
           KHEEIKGSD
Sbjct: 218 KHEEIKGSD 226

[Close]

BLAST of CmaCh10G001450 vs. TAIR 10
Match: AT1G10200.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 273.1 bits (697), Expect = 2.6e-73
Identity = 126/185 (68.11%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           MAF GTTQKC ACDKTVYLVD+LTADN++YHKACFRC+HCK TLKL NY+SFEGVLYC+P
Sbjct: 1   MAFAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLYCRP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRS-TNQVQSNSKVSSLFAGTQDKCVTCKKTVYPI 222
           HFDQ FK TGSLEKSFEGTP+  + DR    +  + +KVS++F GT++KCV C KTVYPI
Sbjct: 61  HFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGGTREKCVGCDKTVYPI 120

Query: 223 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 282
           EKV+V+   YH++CF+C+HGGC ISPSNYIAHE +LYC+HHH QL K+KGN SQL+   E
Sbjct: 121 EKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNLSQLEGGGE 180

Query: 283 IKGSD 287
               D
Sbjct: 181 NAAKD 185

[Close]

BLAST of CmaCh10G001450 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-60
Identity = 109/184 (59.24%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           M+F GT QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 222
           HF+QLFK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 223 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 282
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 283 IKGS 286
           IK S
Sbjct: 181 IKRS 182

[Close]

BLAST of CmaCh10G001450 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-60
Identity = 109/184 (59.24%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           M+F GT QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 222
           HF+QLFK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 223 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 282
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 283 IKGS 286
           IK S
Sbjct: 181 IKRS 182

[Close]

BLAST of CmaCh10G001450 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-60
Identity = 109/184 (59.24%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           M+F GT QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 222
           HF+QLFK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 223 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 282
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 283 IKGS 286
           IK S
Sbjct: 181 IKRS 182

[Close]

BLAST of CmaCh10G001450 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 231.1 bits (588), Expect = 1.1e-60
Identity = 109/184 (59.24%), Postives = 143/184 (77.72%), Query Frame = 0


Query: 103 MAFLGTTQKCKACDKTVYLVDQLTADNKIYHKACFRCYHCKSTLKLFNYSSFEGVLYCKP 162
           M+F GT QKCKAC+KTVY V+ L+AD   YHK+CF+C HCKS L+L +YSS EGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 163 HFDQLFKMTGSLEKSFEGTPRTIRTDRSTNQV-QSNSKVSSLFAGTQDKCVTCKKTVYPI 222
           HF+QLFK +GS  K+F+   ++   D+ST ++ ++ S+V+  F+GTQ+KC TC KTVYPI
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKS--ADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPI 120

Query: 223 EKVAVDSKSYHRACFRCSHGGCVISPSNYIAHEHRLYCRHHHNQLFKQKGNFSQLDKHEE 282
           EKV V+S++YH++CF+CSHGGC ISPSNY A E  LYC+HH  QLFK+KG+++ L K   
Sbjct: 121 EKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS 180

Query: 283 IKGS 286
           IK S
Sbjct: 181 IKRS 182

The following BLAST results are available for this feature:

BLAST of CmaCh10G001450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94JX5	3.6e-72	68.11	LIM domain-containing protein WLIM1 OS=Arabidopsis thaliana OX=3702 GN=WLIM1 PE=...	[more]
P29675	2.4e-68	64.80	Pollen-specific protein SF3 OS=Helianthus annuus OX=4232 GN=SF3 PE=2 SV=1	[more]
Q9M047	1.6e-59	59.24	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	2.1e-59	59.34	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
O80839	1.7e-53	54.60	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]

BLAST of CmaCh10G001450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A314V1K9	1.7e-120	76.66	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_230...	[more]
A0A6J1JLG7	2.8e-104	100.00	LIM domain-containing protein WLIM1-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1E4K3	2.8e-104	100.00	LIM domain-containing protein WLIM1-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0LNY7	7.0e-103	96.24	Pollen-specific protein SF3 OS=Cucumis sativus OX=3659 GN=Csa_1G005660 PE=4 SV=1	[more]
A0A1S3BVF2	1.6e-102	96.24	LIM domain-containing protein WLIM1-like OS=Cucumis melo OX=3656 GN=LOC103493931...	[more]

BLAST of CmaCh10G001450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589465.1	1.8e-153	95.45	LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. soro...	[more]
PQM43126.1	3.4e-120	76.66	hypothetical protein Pyn_23032 [Prunus yedoensis var. nudiflora]	[more]
KAF9667830.1	3.2e-118	75.70	hypothetical protein SADUNF_Sadunf15G0064100 [Salix dunnii]	[more]
KAG5046276.1	2.1e-109	69.67	hypothetical protein JHK86_015682 [Glycine max] >KAG5148775.1 hypothetical prote...	[more]
KAG7023149.1	6.3e-106	98.94	LIM domain-containing protein WLIM1, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of CmaCh10G001450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10200.1	2.6e-73	68.11	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	1.1e-60	59.24	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	1.1e-60	59.24	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	1.1e-60	59.24	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.4	1.1e-60	59.24	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 111..163 e-value: 1.8E-12 score: 57.4 coord: 210..262 e-value: 1.0E-11 score: 55.0
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 211..266 e-value: 7.0E-10 score: 39.0 coord: 112..166 e-value: 5.7E-10 score: 39.3
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 112..146
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 110..170 score: 13.1473
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 209..269 score: 12.0484
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 107..176 e-value: 4.6E-19 score: 70.4 coord: 205..275 e-value: 4.0E-18 score: 67.3
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 104..283
None	No IPR available	PANTHER	PTHR24206:SF63	GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN	coord: 104..283
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 108..169 e-value: 8.40622E-39 score: 128.737
None	No IPR available	CDD	cd09441	LIM2_SF3	coord: 211..271 e-value: 8.47435E-38 score: 126.046
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 237..275
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 138..178
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 104..137
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 203..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G001450.1	CmaCh10G001450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding