CmaCh10G001440 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh10G001440
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr10: 654674 .. 659607 (+)
RNA-Seq ExpressionCmaCh10G001440
SyntenyCmaCh10G001440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TCAGATTAGAGCGTATTGATGAAACAACCATTCAGATGGTTCTCAAGAAGTTGCAGTCTCTGTTTCCCAAAAATCTGTGCTCTCTAGATAGGAGGATTACGAGGGCTGCTGAAAATCCTGCGCCTGTATCGCTCAGTAATCTGAAGGATGTTGATCGATTTAGACGCAGTGCTATTCATGATCACTAAGGATCAAGGAACTCTGTTAAGAGCTTGTGGAGATTGCAATTAACTTGGATCTTGACGGAAAATGTGAAATGCAGTGGGCGAGCTGCTGGAGAAAAAAAGGCGATCCTGAAGAGTTCGTCGCATGCGAAACTATGATTGAACACAGGATGAGCTGCAAAAAGACGGAGCCGAAGTAAGTATTCTTCAAATTCCATACCTGTTCTTACTGTTCTTCAGCATGAATGTATATCTTCAGTTATTTTTTTTGCATGAAGGTCGAGTACTAAAAAGTGCCCTAGATTGTTGTTTTACGAGATTAATGGGAGGCTTCTGAATTAGTTTAGAATCTTGTGAAGCTTTTTTTTTTCTGCTGCTTTCTACAGAAATAAAGTAGAGACATAATTGAAAAGGAGAAAGGAAAGTGAGAGTTGCCATGCATGAACGCAATCAAAAACCTCAAGACAAAATGAGTAAGATATAGTGCAATGTGACAGTGCACTCGTGCGTAACTATAGTGAAATAAGATAATTGAGGGCTAATTGGGATGCGATGGATCAGCACTCAACACCAACAATGCAAAAGAAAAAGAAAATTTGTCATCATTTTTTTGCATATTTTTGACCTCTGATGCAATGATTAACTTGATCTTTTTCTGGGTGAACTTTAAAATAAGAGGAATCTTGTTCAATACCCAAGGCATCGTTGCTTAAAGTTTTATCATTTTTTTTTTTCCCTTAAAGAAGCCAGAGCAATACAGGCCATAGCAGGAAAAGCATAAGATTCATAGCTTTTGTTTTCTTTTTAGATTTTCTAAGTTATTGCTCCACTTTAGAGATTGCTTTTTGATCATAGAAACAACCAGCAGATCATCTCCACTTAGTTGGAGGAGGAGCGTTCATCTGGGTCCTTGGATTCCAAGCAATCATAGTTTTACCCAGATTTTCTACAATTCTCTGTTCCTACTTGGTGGCTTTTCCCTTAATCTTTATGTAACGGCTCAAATCCACTGCTAACAGATATTGTCTTCTTTAGACTTTTCCTTTCGAGCTTCCCCTCAAGGTTTTTAAAACGCGTTTGCTAGGGAGAAAGTTTCCACACCCTTATAAAGAATGCTTCGTTCTTCACCCCAACCGAGGTGGGATCTCACACTTTATCTCTTATTCTCAATCGATCGTATCAAAATGCAGTTGTAAATAAGAGCTATGAAGGAAGCCAGTTCTCATTCAAACCAACCTTTTCTCTTTATCATATAAGTCCATTGAAAAGTTCTCCTGCGTATTTGAATGGCTGAGCTTTTCAAATTTCATATTTTTCTACCATTTTCCTCCAATTATAGGATGCAACTGGTCTGCAGATCTGAGGTCAAACTTTATTGAGTTCAGTTCAATCCCTGCTCTGGTTTGGTTTTATTACCTTCTCTGCCATATCAGATTCCTCAGTTCTGAAAACTTCTTTTTTCCAAGAAAATCACATCAAGGGAATAAAACAAAACAAAAACACCGTACATACTCGATGAATTATGAAAAACTTCCTGCTCCACAGATTAGGAGGCATATCATTGGTGAGTCATTGAATCTCATTCAGTGACTCCAGCTGTTAGATAAGAATAATAATTGAGATATCTCTCATAATTTAGAAGATCTTGTTTGCTTTCCTTCCAGATCCAAGATCCCCTAAGATCAGAAAGGAGCTTTCTTTTATGGAAGTGCTGATACAAGAATTTGTACCTCTTTCTGCATGTTTAAATGTGATTTAAAGTTATGATCATCTGAAACAAAGCATTCACTTCACATACAACAACAAACAAACAAACTTGTTGATGGAAAAATGAAAATAGCTTATAGTCTCAATTGAATAGAAGAACAGTACATCTCATATTTCTGCAGTGCTTATGGAAGGTTTTCAGCTCACACTCAAAAAATTTATTGAAACTCAAATTTTTCTTCTAGTACACTAAAGAATAGCAAACCCGAACCCGCAAGTATTGATGAAAAACGTAACTTTATCTGTTCCTCATGCACAATATAACAGTTGCATCCAACATCAAGTTCTTCTCAACTGGTGTGTTCTCAGTCACTCCCTTTAATCTCTTCATGCTTGTCAAGTTGGCTGAAATTCCCCTTCTGTTTGAAGAGTTGGTTGTGATGATGCCTACAGTACAGTCGATGTTCGTGTGCTATGTAGTTTGATGGGCTAATCACACATCCTCCATGTGAGCACCTGAAGCAAGCTCTGTGGTATGATTTACTATCTACTGCCACCTGATGGAAGAAAAAAAAAACAGCATCTCTTAAAATTAAGCCAACTAGTTTTAGCGCAATTTGAGCATCACTCGATTGGTTAGCACATTATATCCTCCATTAAAAGGTTAAGAAGTTCTTCAAAGATTCCATTGCCTTAGATCAAGGAGACCGTCATCTCCAAAAGTAGGGTGGTTAAGTTCGAGTCTGAATCAACGCAACACGAAGGGATGAAAAGAAAGCTAGTTTAGGACAACATTCAACTATCCTAGTTCGTAATTTCCAAATGTATCATACTGTTTCGGGTTGTATTATAAGGAAATTTCTTGAACTGTAGCTCTTCCTTTTGCATGATAAAGTTGATTCTCTCTCGAGAAAAACAGGTAAATAGGAAGGTTTTGTACCCTTTTAGCATTTGAATGTTTAGGTTGTAAATTTGATGAGAACTTGAGTGAATGATTCAAAGAATAGCCACAGGAAGAAAGTAAAAAACTAGAGGCTTTTAAACTGTATAATGGCCATTTACCTTCTCAATTGGATAAACAGTTTTCTTGCAAGTAACACATTTATCTTGAGTTCCAGCAAATAAACTCGACACTTTGCTGTTGGATTGGACCTTTCAAATGTTAATAACAACAACTAGTAGTTAGGAATCAGAGCATAAGTATTGATTTTAGCAGATAAGCTTCCAAAAAGTGAATAAAGAAAAGAAAACCTGATTGGTAGATCTGTCTGTTCTAATGGTTCTTGGAGTACCTAAAGAGAAGAAAGAAGAAGATAATAGACTAAACAAGCAGAAGTCATTGAAGGCGGAAAAAGACTCAACAACAACCAATTACCTTCAAAACTTTTTTCCAAGCTTCCAGTCATCTTGAACAACTGATCAAAGTGAGGTTTGCAATATAATACACCTTCAAAGGAGGAGTAATTGAACAACTGCAGTGACATAAAAAAACAACAGAATCAGTATTGGTGATAATGTTCGAGCGATGGGCACCAAGCTAACCTAAACATAGCTCTACTAATTAAGAAATATCTCTTCGATCAAAAGGTTATGATCTTAAAAGATAAACCATGATCCTTGTACACTGCAGAATCTCAAACACATACAAAATCTAAGGTAGCAAAATTCATTGTCGAATAAGATATAAAGACAGACTCAAGTGGAATCAGATAGTTATGAGATACGGGAATCATTTAACTATTACAACATGAAAATTTTAGCCAAAAGTGCAGATAGAATTGGAAATAGGATCATTTTATATCAGTTTGAGATACTGAATATGATGGATAGGATCTGGAAATAGGCATATCTTGAGCAGCATGCATCTATTCCATTCACAACAAGGCTCTCATCTGAAGGAAGATCCATATAAGAAAGGAATATATGTGTGTAAGATTCAAAAGAGTTACCTTTAGAGTGCTCTTGCAATGGTAGCACCTGAAACAGGCCTTGTGGTAGATTTTGTTATCAGCAGTGAGCTGATCAACCAAGTAAACAGTTTTGTCACAGGCCTTGCACTTTTGGGTTGTCCCTAAAAACGCCATCTTCAAAAAATCTTTAGGATTCAAGGAAGAATATGAACAGAACAGAACAGAAATGAACTGAACTGCCAAGCTGAGAAGAAGGGAAGGGAAGGGAAGGGAAGGGAAGAAGAAGAGGCAGAAGATCTTTCCTTCCTCCTTTTTATGTCGTCTAAGTGTCCGGCAAATTTCCCTCTTAGAGTCAGAGATTACAGCTCAGGCACATTCGAACAAGCTGACAAATTTCCAGTAATGAGCAATTTGAAAATTTGACCAACATAATTCCCCATCTAGACACCCATTAACTACTTCATTTTACACGTGTCATCTCCTTATTTGATCACATAAAGCGAAAATATGTCCCAAGAAGTGGATTAATGATGGGTTTAATGCAATTTTATGACCATATACGTTATGTTTCAGCACAGCCATGGAAGTAACAGAACCAAGTTTATTTTAATGGGAAATGGTCGGCTCAGTTACAAAGCTGAAAGATGATCTGTAGAATGAAATATAGAATATAGTTAGATCAAGCAGAGTAATGATGAAAGATGAAGACTTTTTCAATTAAAAAAAAAATAAAAAAAAATTCAATGTCTTTGCATAAGCAAATGTGTGACAGATAAGAAATGCATATACAAGAAATACTATACACATTTTTATTTGTATGATTTCATGATTTGATGTATAACCAAGTCTTCGAACTAATTATTGTGCCAAATTCAATATCTATTCTCGAGCTCTTTTCTTTAGGGGAAAATTCGATCCGGAATGATTTCTTTTCTTTTTTTTACATTAGGATACAAACGTTAGGCGATCGATCGTTTATTCCATCATTTACATTTACATTGTATACAGTTTTTTCTTCTTCACGCAACATTTTAAGTGGAAATGGAACAATTTCAATACTGTGATTGTTTTGTTGGGCCTTTTTTTCTTTTCAATTTAGCTTTACATCTTTTCTCATTCTCCTTTTTAGGCGCCGACTTGGAAGAGCGATTGA

mRNA sequence

TCAGATTAGAGCGTATTGATGAAACAACCATTCAGATGGTTCTCAAGAAGTTGCAGTCTCTGTTTCCCAAAAATCTGTGCTCTCTAGATAGGAGGATTACGAGGGCTGCTGAAAATCCTGCGCCTGTATCGCTCAGTAATCTGAAGGATGTTGATCGATTTAGACGCAGTGCTATTCATGATCACTAAGGATCAAGGAACTCTGTTAAGAGCTTGTGGAGATTGCAATTAACTTGGATCTTGACGGAAAATGTGAAATGCAGTGGGCGAGCTGCTGGAGAAAAAAAGGCGATCCTGAAGAGTTCGTCGCATGCGAAACTATGATTGAACACAGGATGAGCTGCAAAAAGACGGAGCCGAAAAGCCAGAGCAATACAGGCCATAGCAGGAAAAGCATAAGATTCATAGCTTTTGTTTTCTTTTTAGATTTTCTAAGATGCAACTGGTCTGCAGATCTGAGGTCAAACTTTATTGAGTTCAGTTCAATCCCTGCTCTGAGTGCTCTTGCAATGGTAGCACCTGAAACAGGCCTTGTGGTAGATTTTGTTATCAGCAGTGAGCTGATCAACCAAAACAGAAATGAACTGAACTGCCAAGCTGAGAAGAAGGGAAGGGAAGGGAAGGGAAGGGAAGAAGAAGAGGCAGAAGATCTTTCCTTCCTCCTTTTTATGTCGTCTAAGTGTCCGGCAAATTTCCCTCTTAGAGTCAGAGATTACAGCTCAGGCACATTCGAACAAGCTGACAAATTTCCAGCGCCGACTTGGAAGAGCGATTGA

Coding sequence (CDS)

ATGCAGTGGGCGAGCTGCTGGAGAAAAAAAGGCGATCCTGAAGAGTTCGTCGCATGCGAAACTATGATTGAACACAGGATGAGCTGCAAAAAGACGGAGCCGAAAAGCCAGAGCAATACAGGCCATAGCAGGAAAAGCATAAGATTCATAGCTTTTGTTTTCTTTTTAGATTTTCTAAGATGCAACTGGTCTGCAGATCTGAGGTCAAACTTTATTGAGTTCAGTTCAATCCCTGCTCTGAGTGCTCTTGCAATGGTAGCACCTGAAACAGGCCTTGTGGTAGATTTTGTTATCAGCAGTGAGCTGATCAACCAAAACAGAAATGAACTGAACTGCCAAGCTGAGAAGAAGGGAAGGGAAGGGAAGGGAAGGGAAGAAGAAGAGGCAGAAGATCTTTCCTTCCTCCTTTTTATGTCGTCTAAGTGTCCGGCAAATTTCCCTCTTAGAGTCAGAGATTACAGCTCAGGCACATTCGAACAAGCTGACAAATTTCCAGCGCCGACTTGGAAGAGCGATTGA

Protein sequence

MQWASCWRKKGDPEEFVACETMIEHRMSCKKTEPKSQSNTGHSRKSIRFIAFVFFLDFLRCNWSADLRSNFIEFSSIPALSALAMVAPETGLVVDFVISSELINQNRNELNCQAEKKGREGKGREEEEAEDLSFLLFMSSKCPANFPLRVRDYSSGTFEQADKFPAPTWKSD
Homology
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BLAST of CmaCh10G001440 vs. NCBI nr
Match: KAG6589464.1 (hypothetical protein SDJN03_14887, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 59.3 bits (142), Expect = 3.8e-05
Identity = 25/30 (83.33%), Postives = 28/30 (93.33%), Query Frame = 0 

Query: 9   KKGDPEEFVACETMIEHRMSCKKTEPKSQS 39
           KKGDPEEFVAC+TMIEHRMSCK +EPKS +
Sbjct: 188 KKGDPEEFVACQTMIEHRMSCKNSEPKSST 217

The following BLAST results are available for this feature:
BLAST of CmaCh10G001440 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh10G001440 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh10G001440 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589464.13.8e-0583.33hypothetical protein SDJN03_14887, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmaCh10G001440 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh10G001440.1CmaCh10G001440.1mRNA