CmaCh10G001020 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G001020
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Histone deacetylase
Location	Cma_Chr10: 417113 .. 423336 (+)
RNA-Seq Expression	CmaCh10G001020
Synteny	CmaCh10G001020

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTACCAGCGGCAGTAGCAGCAAAGGAGGTTGAGGGGAAGGAAAGGGAGAGGAAGGGGAAGGGTAGAGACTAGAGAGGAGAGTCTTTTTAAAAAACATATATTCAACAAATTAATGGTATTCAAAGAGATACCAATAAGACCACATTTTGCATCAATAANTTGAAGGCCCATTGGACAATGAGTCACTTGTTGGGCCGGAAGCTTGGGCTTTGGACATGTTGACAAGGCCCATATATGAACTGATTTATTAGTTCTTTAGACCACTGTCCTCCCGCTCGTTGTCGAAGCTTTTGCTGAACTACTTCGGCTTTGACCGTTGCAGGTTCTTGTTTTACGGTTTTCGTGTTTTCATTTTTCTTCAATTTGCGAGCGGAGTCGTGGACTGGGCGCCGACGAATTGAGGGTGGATATGGCCGATGATACTTACGGCGGCGCTTCACTTCCGTCAGGTCCCGATGGCCGGAAACGCCGTGTGACCTACTTCTACGAGCCCACAATCGGCGATTATTACTACGGCCAAGGCCATCCGATGAAACCTCACCGTATCCGCATGGCCCATAACCTCATTGTTCACTACGGCCTTCATCGTCGGATGGAGATCAACCGGCCATACCCTGCCGGTTCGGAGGATATCCGGAGGTTTCACTCCGATGACTATGTTGATTTTCTCGCCTCCGTCAGCCCGGAAACGCTGTCGGATCATGCCTTCTCTCGCCATCTCAAGCGCTTTAATGTTGGCGAGGACTGCCCTGTTTTTGATGGCTTATTCGGCTTCTGCCAGGCCTCTGCTGGCGGCTCCATTGGTGCTGCCGTCAAGCTCAATCGCGGCGATGCTGATATTGCTATCAATTGGGCCGGTGGGCTTCATCATGCTAAGAAGTCTGAGGCCTCCGGTTTTTGTTACGTCAATGATATTGTGTTGGGCATTCTTGAGCTGCTGAAGTACCACAGGGTAATCATCTTAAGAAGAGTATTTGTGTTATCTGCTATAGTTTTGACCAACTGCGCTGCATACTCTGTTCATTTAGTATATATTTTTCCTTTTTTGGTCCTTGAAGTTTGCGTAGGACTGGTTAATTTCTGCTTGAAGTAGAGGTTTTCTTCCTTGTTCTACATGAAAAATGAAAATTTTGCGTTTGCTGGATTACACATTCATCATATCCTATTCTTTGACAATTTTTGTACTGTTATTTTGTGTTTTACTTCTAATTCTTTTGGGTTTTCGGGCTTGTGGGGTTGCCAAGAGCACAAGGTTTGGGAACATTTCTCATCAGTTTTTAGACCAATGCATTCGATCGTTCTGTTAAAGCTTTAGCTATACTCCACTTTCTAAGCTGCTCAATATCATTGTGCAGCGTGTATTATATATTGACATTGATGTCCATCATGGTGATGGTGTGGAGGAGGCGTTTTACACTACCGACAGGGTAATGTCGGTCTCCTTCCATAAATTTGGGGATTTCTTTCCAGGGACTGGACACATTAAGCATGTTGGGGCAGGGTCTGGTAAAAACTATGCTCTTAATGTCCCTTTGAATGATGGAATGGATGATGACAGTTTTCGTGGTCTGTTTAGGCCAATCATTCAAAAAGTCATGGAGGTGTATCAGCCAGAGGCAGTAGTACTCCAATGTGGTGCTGATTCATTAGCTGGTGATAGGTTGGGGTGCTTCAACTTATCTGTGAAGGGCCATGCAGATTGTCTTCGTTTCTTGAGATCATTTAACGTTCCTTTAATGGTATTAGGTGGTGGAGGATATACAATCCGCAACGTTGCTCGCTGCTGGTGTTACGAGGTCTCTTTCTCTTCGTTCTTGTCTGTATATTTATTTCTACCTCTGTAGAATTAGGAACCATCCTTACAAGTTTCGTTTGTGGAGGTTTCTCTCAACAGACAGCGGTTGCTGTTGGAGTTGAACCAGACAACAAATTGCCTTACAACGAGTATTTCGAGTATTTTGGACCTGATTACACGCTTCACATCGAACCATCCAACATGGAGAATCTAAATTCACCTAAAGATATGGAAAAAATAAGGTGACTTGTGATTGAGTGTTGTTCAGTTCATGGTATACTTGGTCTGCTTCTTTCAATTCAACACTGTAAGCTTAATTTCTTTTGTTGTCGATAATCTTAGTATAAACACTCCTTTCCAAAAAATACCCAATAATCATATCAGAAATGTTCTAAATGCTTCTGTAGTCTGAAATTTAACTTTCTTAGTTGTAGTCATTAGTTAACATTGGAATTGCTCCATTATGTTCGTTAAATGCTAAATACGTGTCGGGTTTTAAGAACTTCTATGCTTTTATGCTGTCTGAATGAAAAATTTTATATAATCAAGTTGCCTCCTCCATTTCTCCTTCTAGGAACACCCTGCTGGAGCAACTCTCTAGACTCCCACATGCTCCCAGTGTACCTTTCCAGATGACTCCCTCGTCCGAAGTCCCCGAAGAGGTTACAGAAAACCCGTTACTATTATTATAGACCCTGCACATTACTTCATAATTTCTGTTTTTATGTAGCGTTTTCTCCTCTTGAGATCATGTTGGTTCTTTGGTGGTAAGGTGGAAGAGAACATTGACCGTAGACCGAAACGCCGCATTTGGAACGGTGAGGATTATGATTCTGCACCTGAAGAAAACAGAAAGCGACCAAACATGAGTGAAGGGCATGGTGTAAATAATCTGACGAGGTTAAGCCATAAGCTATATTTTCTTTCTTATACTTTTTTCTTGACAAGGATATATCTTGAGCTAATCATTGAGGCATTCCAATTTCTGCAGAGAGCTTAGGTTTAATAACTGAACATTCGATATATATGATGCAGGGACGTCGTAGATGGTATGGAGGAAGATAAAAACATGAACCATCGAACTTGCTGACACAAAAACTTGTGTGTTGAGTTCTCGACGACCTTTAAGTCTTTAACCAATTTCGATAAAGACACCTAGGATCAAGTCTGATTTTCACTTTTGATTCGATATTGGAGCATACGAATTAATCTTCTGTTTTCAAGGGTTTTCTGTTTTCAACATGAAAGTTGCAATTTGTACACAAGACATACACTGTAAACAGAAATCAATGGCGTTTACATCTGAGACTTTCGTACCAATATTTTGAGTTGATTTGAACCTTATGATCTTCTCTGGTATGTGTGAAATTCATTGTTCAGAATTGAAATTACTCATTACGATGCTTCTTCTATATTCTTACATCCGTGGTATGTAGTTGAACTAGTCATAGTTCAACGGGATAAAAGTATATATTCTGGATTGAAAGGCTAGAGGTTGAAGCAACTCTTGCTTATAAGAAAATAGTAGTGATAAAAATAGCTTATTTTATACAAATATGAAAATTTTGATGCCATTAAGTAGTAAGAATCCCGTTGATTTTTCCCATTTCTTTCCATGTTTTTCAAGGAAACCCTGATCGAGAAAAGTAGGAGCTCAGGATACTCGTGATTCTATCCTCAATTTGCATCTCGCTCGCCAAAAATCCTTTTTCACAGAGGAGAAGTTTTGAATCGCGAAACCCACTTATGTCCTTCTATCTCCATATCCTTGCGTCGGAGCTTTCCAAGACTTATCTAACTCTTTTACGAACAAAGGAACTGCATGCTTTTATTACCAAAACACATCTTGCTTGCGACCCATTTTACGCAACTAGAATTGTCAGGCTTTACTCTATCAATAGCCGACTCAACTATGCCCGCCATGTGTTCGACAAAACTCCCAACCGAAGTGTCTACCTCTGGAACTCAATCATTCGAGCTTACGCGAAAGCCCATAAATTCGGTAATGCATTATCTCTGTTCTTTACAATGTTTGGAACTGAGACTCTGCCCGATAACTTCACTTATTCATGCATCATAAGGGTATGCGCTGAAAATTTCCATAGAGAACGGCTGAAACTTGTTCATGGACGTGTTTTAGCATCTGGGTTTGGATTAGATCCTATCTGTTGCAGCGCGCTAGTCACTGCATACTCAAATCTAGACCTTATTGAAGATGCAAGCAAGGTGTTTGATGTAATGCCTCATCCAGACTTGGTTATGTGGAATTCGATCATTTCTGGTTTTGGGTATTGCGGGTTTTGGAATCAAGGGCTCTTGCTATTCTCTAGGATGAGGAATTTGGGAGGACATCCGGATGGATACACGGTAGTTGGTGTAGCATCAGGTATAGCAGAACCAAGCTTACTGAGTACTGGTAAAGGTATTCATGGATTTTGCCTCAAGTGTAGTCTTGACTCCAATGAGCACGTAGCTAGTGCACTTGTGAGCATGTATTCGAGGTGTAATTGCATGTATTCAGCATATTTAGTTTTTATTAGTTTGATACAGCCTGATTTAGTTACATGGTCTGCTTTAATAACTGGGTATTCTCAATCTGGTGATTTCTGGAAGGCACTGTTTTTCTTTCAGAAACTGAATATGCAGGGCATGAAACCGGATGCCATTTTGATTGCCAGCATTTTGGCCGCTGCTGCTCAATCAGCCAACATAAGGCCTGGCATTGAGATACATGGCTATGCTCTTCGACAAGGGATAGATTCAAACGAAATGGTATCCTCTTCTCTCATAGACATGTACTCCAAGTGTGGTTATTTGAGTTTGGGAATTCGTGTTTTTCATATTATGCAACGAAAAGGTATTGTGGCATACAATTCTATAATATGGGGAATGGGTCTGCATGGGCTTGCATCTAAGGCATTGGAATCGTTTGAGGAGTTGTTGGATATTGGTCTAATGCCTAATGAGTCTACTTTCTCTGCTCTCCTCTGTGCTTGCTGTCATGCTGGGCTTAGCTCTGTTGGTAAGGCGATTTTCAGAAGGATGAGAAATGAGTTTGGCATCAAATACAGAACAGAGCATTATGTTTACATTGTAAAGCTTCTTGGAATGAGTGGGGAGTTAGAAGAGGCTTATAATCTTGTCCTGTCCTTGCCAGAACCTGTAGACTCTGGTGTATGGGGGGCTCTGCTGTCCTGCTGTGATGCTTGTGGGAACCTTGAACTGGCTGAAATTGTTGCACAGAAGCTCTTAGAAAATAATCCCCACAAAATGGCTTATAGAGTAATGCTCTCTAATATCTATGCTGGAGAAGGGCGATGGGATGATGTGAAGAAGCTAAGGGATACAATGACTGAAAAGGAACGAGGAAAATTGCCCGGGCTTAGCTGGATTTGAGAGTTTTATGTTTGTGATTAACCGTGCAAGGGTTGGTGTAATATGTGGATTGTGAGATCTCATATCGGTTGGATATAGAAACAAAGCATTCTTTACAAGGGTGTGAAAATCTCTCTCTACCAGACGCGTTTTAAAATCATGAGGCTGACAGTGATACAAAGTGGATAATATCTGCTAGCGGTGGGCTTGGGCTGTTACAAATGGTATTAGAGCTAGACATTGGGCGGTGTGCCAAATGGGGTGGGTTGTGAGATCCCACATCAGTTGAAGAGGGGAACAAAACATTCCTTATAAAGGTGTGGAAACCTCTTCTTAGCAGACGAGTTTTAAAACCATAAGGCTGACAGTGATATGTAACGAACCAAAGCGGACAATATCTGCTAGTAGTGGACTTAAACTGTTACAGTTGACTAGGTAAGTCGCTTGGTCATCATGAATCATTACATTCAACTTGAATATTTATAGCGTTCTTTTGACTTTGAAATGTATCTGACAACAGCTTTACCCACACTACAACCACAAGGATCTATGTTCAGTTTCTCTAGCTTACACTAAATAGCGAGTCTTATTGATTGAGTGTTAGAAATTTGGTGTGTTCTTTTTTATATATATTTAAAGATGAATAAAACACTATTCTCTTGTTGGTTGACAGATTACAGAGAAGACCTAAAGAAATTGGCTGGCTTTCCAAGCTGCTGATTCTGTTGCATTTGGCTTCACGACATAGCACCCATTGTTTGAACTGCAAGAACTTAATCTTCCTGTTATGGTGCCATCGGAACCAGGATAGTCCATGGATAATCTTCTCTCTTTTTCATGCCTCTTGGCTCTTTTTCTTAGACTCTGTCGCTTCATTATGGAGGTCAACATAGCTTTGCCACTTTTAGCATCCACTGGCATCGGCATTGCCTCAAGACCCATCAACTTAGCTACCACTCCTGGTTTGCGCCACAGGACATTCTCTCCAGCTATCGTTGATGGCAACCGTAAGGCTGTCTCCAATGTCAAATTGAACTCGTTTTCATGA

mRNA sequence

ATGGCAGTACCAGCGGCAGTAGCAGCAAAGGAGCGGAGTCGTGGACTGGGCGCCGACGAATTGAGGGTGGATATGGCCGATGATACTTACGGCGGCGCTTCACTTCCGTCAGGTCCCGATGGCCGGAAACGCCGTGTGACCTACTTCTACGAGCCCACAATCGGCGATTATTACTACGGCCAAGGCCATCCGATGAAACCTCACCGTATCCGCATGGCCCATAACCTCATTGTTCACTACGGCCTTCATCGTCGGATGGAGATCAACCGGCCATACCCTGCCGGTTCGGAGGATATCCGGAGGTTTCACTCCGATGACTATGTTGATTTTCTCGCCTCCGTCAGCCCGGAAACGCTGTCGGATCATGCCTTCTCTCGCCATCTCAAGCGCTTTAATGTTGGCGAGGACTGCCCTGTTTTTGATGGCTTATTCGGCTTCTGCCAGGCCTCTGCTGGCGGCTCCATTGGTGCTGCCGTCAAGCTCAATCGCGGCGATGCTGATATTGCTATCAATTGGGCCGGTGGGCTTCATCATGCTAAGAAGTCTGAGGCCTCCGGTTTTTGTTACGTCAATGATATTGTGTTGGGCATTCTTGAGCTGCTGAAGTACCACAGGCGTGTATTATATATTGACATTGATGTCCATCATGGTGATGGTGTGGAGGAGGCGTTTTACACTACCGACAGGGTAATGTCGGTCTCCTTCCATAAATTTGGGGATTTCTTTCCAGGGACTGGACACATTAAGCATGTTGGGGCAGGGTCTGGTAAAAACTATGCTCTTAATGTCCCTTTGAATGATGGAATGGATGATGACAGTTTTCGTGGTCTGTTTAGGCCAATCATTCAAAAAGTCATGGAGGTGTATCAGCCAGAGGCAGTAGTACTCCAATGTGGTGCTGATTCATTAGCTGGTGATAGGTTGGGGTGCTTCAACTTATCTGTGAAGGGCCATGCAGATTGTCTTCGTTTCTTGAGATCATTTAACGTTCCTTTAATGGTATTAGGTGGTGGAGGATATACAATCCGCAACGTTGCTCGCTGCTGGTGTTACGAGACAGCGGTTGCTGTTGGAGTTGAACCAGACAACAAATTGCCTTACAACGAGTATTTCGAGTATTTTGGACCTGATTACACGCTTCACATCGAACCATCCAACATGGAGAATCTAAATTCACCTAAAGATATGGAAAAAATAAGGAACACCCTGCTGGAGCAACTCTCTAGACTCCCACATGCTCCCAGTGTACCTTTCCAGATGACTCCCTCGTCCGAAGTCCCCGAAGAGCGTTTTCTCCTCTTGAGATCATGTTGGTTCTTTGGTGGTAAGGTGGAAGAGAACATTGACCGTAGACCGAAACGCCGCATTTGGAACGGTGAGGATTATGATTCTGCACCTGAAGAAAACAGAAAGCGACCAAACATGAGTGAAGGGCATGGTAGGAGAAGTTTTGAATCGCGAAACCCACTTATGTCCTTCTATCTCCATATCCTTGCGTCGGAGCTTTCCAAGACTTATCTAACTCTTTTACGAACAAAGGAACTGCATGCTTTTATTACCAAAACACATCTTGCTTGCGACCCATTTTACGCAACTAGAATTGTCAGGCTTTACTCTATCAATAGCCGACTCAACTATGCCCGCCATGTGTTCGACAAAACTCCCAACCGAAGTGTCTACCTCTGGAACTCAATCATTCGAGCTTACGCGAAAGCCCATAAATTCGGTAATGCATTATCTCTGTTCTTTACAATGTTTGGAACTGAGACTCTGCCCGATAACTTCACTTATTCATGCATCATAAGGGTATGCGCTGAAAATTTCCATAGAGAACGGCTGAAACTTGTTCATGGACGTGTTTTAGCATCTGGGTTTGGATTAGATCCTATCTGTTGCAGCGCGCTAGTCACTGCATACTCAAATCTAGACCTTATTGAAGATGCAAGCAAGGTGTTTGATGTAATGCCTCATCCAGACTTGGTTATGTGGAATTCGATCATTTCTGGTTTTGGGTATTGCGGGTTTTGGAATCAAGGGCTCTTGCTATTCTCTAGGATGAGGAATTTGGGAGGACATCCGGATGGATACACGGTAGTTGGTGTAGCATCAGGTATAGCAGAACCAAGCTTACTGAGTACTGGTAAAGGTATTCATGGATTTTGCCTCAAGTGTAGTCTTGACTCCAATGAGCACCCTGATTTAGTTACATGGTCTGCTTTAATAACTGGGTATTCTCAATCTGGTGATTTCTGGAAGGCACTGTTTTTCTTTCAGAAACTGAATATGCAGGGCATGAAACCGGATGCCATTTTGATTGCCAGCATTTTGGCCGCTGCTGCTCAATCAGCCAACATAAGGCCTGGCATTGAGATACATGGCTATGCTCTTCGACAAGGGATAGATTCAAACGAAATGGTATCCTCTTCTCTCATAGACATGTACTCCAAGTGTGGTTATTTGAGTTTGGGAATTCGTGTTTTTCATATTATGCAACGAAAAGGTATTGTGGCATACAATTCTATAATATGGGGAATGGGTCTGCATGGGCTTGCATCTAAGGCATTGGAATCGTTTGAGGAGTTGTTGGATATTGGTCTAATGCCTAATGAGTCTACTTTCTCTGCTCTCCTCTGTGCTTGCTGTCATGCTGGGCTTAGCTCTGTTGGTAAGGCGATTTTCAGAAGGATGAGAAATGAGTTTGGCATCAAATACAGAACAGAGCATTATGTTTACATTGTAAAGCTTCTTGGAATGAGTGGGGAGTTAGAAGAGGCTTATAATCTTGTCCTGTCCTTGCCAGAACCTGTAGACTCTGGTGTATGGGGGGCTCTGCTGTCCTGCTGTGATGCTTGTGGGAACCTTGAACTGGCTGAAATTGTTGCACAGAAGCTCTTAGAAAATAATCCCCACAAAATGGCTTATAGAGTAATGCTCTCTAATATCTATGCTGGAGAAGGGCGATGGGATGATAGAAGACCTAAAGAAATTGGCTGGCTTTCCAAGCTGCTGATTCTGTTGCATTTGGCTTCACGACATAGCACCCATTGTTTGAACTGCAAGAACTTAATCTTCCTACTCTGTCGCTTCATTATGGAGGTCAACATAGCTTTGCCACTTTTAGCATCCACTGGCATCGGCATTGCCTCAAGACCCATCAACTTAGCTACCACTCCTGGTTTGCGCCACAGGACATTCTCTCCAGCTATCGTTGATGGCAACCGTAAGGCTGTCTCCAATGTCAAATTGAACTCGTTTTCATGA

Coding sequence (CDS)

ATGGCAGTACCAGCGGCAGTAGCAGCAAAGGAGCGGAGTCGTGGACTGGGCGCCGACGAATTGAGGGTGGATATGGCCGATGATACTTACGGCGGCGCTTCACTTCCGTCAGGTCCCGATGGCCGGAAACGCCGTGTGACCTACTTCTACGAGCCCACAATCGGCGATTATTACTACGGCCAAGGCCATCCGATGAAACCTCACCGTATCCGCATGGCCCATAACCTCATTGTTCACTACGGCCTTCATCGTCGGATGGAGATCAACCGGCCATACCCTGCCGGTTCGGAGGATATCCGGAGGTTTCACTCCGATGACTATGTTGATTTTCTCGCCTCCGTCAGCCCGGAAACGCTGTCGGATCATGCCTTCTCTCGCCATCTCAAGCGCTTTAATGTTGGCGAGGACTGCCCTGTTTTTGATGGCTTATTCGGCTTCTGCCAGGCCTCTGCTGGCGGCTCCATTGGTGCTGCCGTCAAGCTCAATCGCGGCGATGCTGATATTGCTATCAATTGGGCCGGTGGGCTTCATCATGCTAAGAAGTCTGAGGCCTCCGGTTTTTGTTACGTCAATGATATTGTGTTGGGCATTCTTGAGCTGCTGAAGTACCACAGGCGTGTATTATATATTGACATTGATGTCCATCATGGTGATGGTGTGGAGGAGGCGTTTTACACTACCGACAGGGTAATGTCGGTCTCCTTCCATAAATTTGGGGATTTCTTTCCAGGGACTGGACACATTAAGCATGTTGGGGCAGGGTCTGGTAAAAACTATGCTCTTAATGTCCCTTTGAATGATGGAATGGATGATGACAGTTTTCGTGGTCTGTTTAGGCCAATCATTCAAAAAGTCATGGAGGTGTATCAGCCAGAGGCAGTAGTACTCCAATGTGGTGCTGATTCATTAGCTGGTGATAGGTTGGGGTGCTTCAACTTATCTGTGAAGGGCCATGCAGATTGTCTTCGTTTCTTGAGATCATTTAACGTTCCTTTAATGGTATTAGGTGGTGGAGGATATACAATCCGCAACGTTGCTCGCTGCTGGTGTTACGAGACAGCGGTTGCTGTTGGAGTTGAACCAGACAACAAATTGCCTTACAACGAGTATTTCGAGTATTTTGGACCTGATTACACGCTTCACATCGAACCATCCAACATGGAGAATCTAAATTCACCTAAAGATATGGAAAAAATAAGGAACACCCTGCTGGAGCAACTCTCTAGACTCCCACATGCTCCCAGTGTACCTTTCCAGATGACTCCCTCGTCCGAAGTCCCCGAAGAGCGTTTTCTCCTCTTGAGATCATGTTGGTTCTTTGGTGGTAAGGTGGAAGAGAACATTGACCGTAGACCGAAACGCCGCATTTGGAACGGTGAGGATTATGATTCTGCACCTGAAGAAAACAGAAAGCGACCAAACATGAGTGAAGGGCATGGTAGGAGAAGTTTTGAATCGCGAAACCCACTTATGTCCTTCTATCTCCATATCCTTGCGTCGGAGCTTTCCAAGACTTATCTAACTCTTTTACGAACAAAGGAACTGCATGCTTTTATTACCAAAACACATCTTGCTTGCGACCCATTTTACGCAACTAGAATTGTCAGGCTTTACTCTATCAATAGCCGACTCAACTATGCCCGCCATGTGTTCGACAAAACTCCCAACCGAAGTGTCTACCTCTGGAACTCAATCATTCGAGCTTACGCGAAAGCCCATAAATTCGGTAATGCATTATCTCTGTTCTTTACAATGTTTGGAACTGAGACTCTGCCCGATAACTTCACTTATTCATGCATCATAAGGGTATGCGCTGAAAATTTCCATAGAGAACGGCTGAAACTTGTTCATGGACGTGTTTTAGCATCTGGGTTTGGATTAGATCCTATCTGTTGCAGCGCGCTAGTCACTGCATACTCAAATCTAGACCTTATTGAAGATGCAAGCAAGGTGTTTGATGTAATGCCTCATCCAGACTTGGTTATGTGGAATTCGATCATTTCTGGTTTTGGGTATTGCGGGTTTTGGAATCAAGGGCTCTTGCTATTCTCTAGGATGAGGAATTTGGGAGGACATCCGGATGGATACACGGTAGTTGGTGTAGCATCAGGTATAGCAGAACCAAGCTTACTGAGTACTGGTAAAGGTATTCATGGATTTTGCCTCAAGTGTAGTCTTGACTCCAATGAGCACCCTGATTTAGTTACATGGTCTGCTTTAATAACTGGGTATTCTCAATCTGGTGATTTCTGGAAGGCACTGTTTTTCTTTCAGAAACTGAATATGCAGGGCATGAAACCGGATGCCATTTTGATTGCCAGCATTTTGGCCGCTGCTGCTCAATCAGCCAACATAAGGCCTGGCATTGAGATACATGGCTATGCTCTTCGACAAGGGATAGATTCAAACGAAATGGTATCCTCTTCTCTCATAGACATGTACTCCAAGTGTGGTTATTTGAGTTTGGGAATTCGTGTTTTTCATATTATGCAACGAAAAGGTATTGTGGCATACAATTCTATAATATGGGGAATGGGTCTGCATGGGCTTGCATCTAAGGCATTGGAATCGTTTGAGGAGTTGTTGGATATTGGTCTAATGCCTAATGAGTCTACTTTCTCTGCTCTCCTCTGTGCTTGCTGTCATGCTGGGCTTAGCTCTGTTGGTAAGGCGATTTTCAGAAGGATGAGAAATGAGTTTGGCATCAAATACAGAACAGAGCATTATGTTTACATTGTAAAGCTTCTTGGAATGAGTGGGGAGTTAGAAGAGGCTTATAATCTTGTCCTGTCCTTGCCAGAACCTGTAGACTCTGGTGTATGGGGGGCTCTGCTGTCCTGCTGTGATGCTTGTGGGAACCTTGAACTGGCTGAAATTGTTGCACAGAAGCTCTTAGAAAATAATCCCCACAAAATGGCTTATAGAGTAATGCTCTCTAATATCTATGCTGGAGAAGGGCGATGGGATGATAGAAGACCTAAAGAAATTGGCTGGCTTTCCAAGCTGCTGATTCTGTTGCATTTGGCTTCACGACATAGCACCCATTGTTTGAACTGCAAGAACTTAATCTTCCTACTCTGTCGCTTCATTATGGAGGTCAACATAGCTTTGCCACTTTTAGCATCCACTGGCATCGGCATTGCCTCAAGACCCATCAACTTAGCTACCACTCCTGGTTTGCGCCACAGGACATTCTCTCCAGCTATCGTTGATGGCAACCGTAAGGCTGTCTCCAATGTCAAATTGAACTCGTTTTCATGA

Protein sequence

MAVPAAVAAKERSRGLGADELRVDMADDTYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINRPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLYIDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGMDDDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEERFLLLRSCWFFGGKVEENIDRRPKRRIWNGEDYDSAPEENRKRPNMSEGHGRRSFESRNPLMSFYLHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHVFDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHRERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGFGYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNEHPDLVTWSALITGYSQSGDFWKALFFFQKLNMQGMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLGIRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHAGLSSVGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGALLSCCDACGNLELAEIVAQKLLENNPHKMAYRVMLSNIYAGEGRWDDRRPKEIGWLSKLLILLHLASRHSTHCLNCKNLIFLLCRFIMEVNIALPLLASTGIGIASRPINLATTPGLRHRTFSPAIVDGNRKAVSNVKLNSFS

Homology

[Close]

BLAST of CmaCh10G001020 vs. ExPASy Swiss-Prot
Match: Q9FML2 (Histone deacetylase 6 OS=Arabidopsis thaliana OX=3702 GN=HDA6 PE=1 SV=1)

HSP 1 Score: 733.0 bits (1891), Expect = 4.8e-210
Identity = 354/441 (80.27%), Postives = 389/441 (88.21%), Query Frame = 0


Query: 32  GASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINRP 91
           G SLPSGPDGRKRRV+YFYEPTIGDYYYGQGHPMKPHRIRMAH+LI+HY LHRR+EI+RP
Sbjct: 7   GISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRP 66

Query: 92  YPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQASA 151
             A + DI RFHS +YVDFLASVSPE++ D + +R+L+RFNVGEDCPVFDGLF FC+ASA
Sbjct: 67  SLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASA 126

Query: 152 GGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLYID 211
           GGSIGAAVKLNR DADIAINW GGLHHAKKSEASGFCYVNDIVLGILELLK  +RVLYID
Sbjct: 127 GGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYID 186

Query: 212 IDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGMDD 271
           IDVHHGDGVEEAFYTTDRVM+VSFHKFGDFFPGTGHI+ VGA  GK YALNVPLNDGMDD
Sbjct: 187 IDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLNDGMDD 246

Query: 272 DSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNVP 331
           +SFR LFRP+IQKVMEVYQPEAVVLQCGADSL+GDRLGCFNLSVKGHADCLRFLRS+NVP
Sbjct: 247 ESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVP 306

Query: 332 LMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMENLN 391
           LMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLH++PS MENLN
Sbjct: 307 LMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPSPMENLN 366

Query: 392 SPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEERFLLLRSCWFFGGKVEENIDRR 451
           +PKDME+IRNTLLEQLS L HAPSV FQ TP    P  R L          + E++++ R
Sbjct: 367 TPKDMERIRNTLLEQLSGLIHAPSVQFQHTP----PVNRVL---------DEPEDDMETR 426

Query: 452 PKRRIWNG-EDYDSAPEENRK 472
           PK RIW+G   Y+S  +++ K
Sbjct: 427 PKPRIWSGTATYESDSDDDDK 434

[Close]

BLAST of CmaCh10G001020 vs. ExPASy Swiss-Prot
Match: O22446 (Histone deacetylase 19 OS=Arabidopsis thaliana OX=3702 GN=HDA19 PE=1 SV=2)

HSP 1 Score: 630.9 bits (1626), Expect = 2.6e-179
Identity = 287/399 (71.93%), Postives = 340/399 (85.21%), Query Frame = 0


Query: 31  GGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINR 90
           GG SL SGPDG KR+V YFY+P +G+YYYGQGHPMKPHRIRM H L+ HYGL + M++ +
Sbjct: 4   GGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLK 63

Query: 91  PYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQAS 150
           P+PA   D+ RFH+DDYV FL S++PET  D    R LKRFNVGEDCPVFDGL+ FCQ  
Sbjct: 64  PFPARDRDLCRFHADDYVSFLRSITPETQQDQI--RQLKRFNVGEDCPVFDGLYSFCQTY 123

Query: 151 AGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLYI 210
           AGGS+G +VKLN G  DIAINWAGGLHHAKK EASGFCYVNDIVL ILELLK H RVLY+
Sbjct: 124 AGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYV 183

Query: 211 DIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGMD 270
           DID+HHGDGVEEAFY TDRVM+VSFHKFGD+FPGTGHI+ +G GSGK Y+LNVPL+DG+D
Sbjct: 184 DIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGID 243

Query: 271 DDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNV 330
           D+S+  LF+PI+ KVME+++P AVVLQCGADSL+GDRLGCFNLS+KGHA+C++F+RSFNV
Sbjct: 244 DESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNV 303

Query: 331 PLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMENL 390
           PL++LGGGGYTIRNVARCWCYET VA+GVE ++K+P +EY+EYFGPDYTLH+ PSNMEN 
Sbjct: 304 PLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMENK 363

Query: 391 NSPKDMEKIRNTLLEQLSRLPHAPSVPFQ-MTPSSEVPE 429
           NS + +E+IRN LL  LS+L HAPSVPFQ   P +E PE
Sbjct: 364 NSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTETPE 400

[Close]

BLAST of CmaCh10G001020 vs. ExPASy Swiss-Prot
Match: Q7Y0Y8 (Histone deacetylase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDAC1 PE=1 SV=1)

HSP 1 Score: 613.2 bits (1580), Expect = 5.6e-174
Identity = 285/401 (71.07%), Postives = 339/401 (84.54%), Query Frame = 0


Query: 31  GGASLP-SGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEIN 90
           GG SLP +G DG KRRV YFY+  +G+YYYGQGHPMKPHRIRM H L+ HYGL  +M++ 
Sbjct: 8   GGNSLPTAGADGAKRRVCYFYDAEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLDQMQVL 67

Query: 91  RPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQA 150
           +P+PA   D+ RFH+DDYV FL SV+PET  D    R LKRFNVGEDCPVFDGL+ FCQ 
Sbjct: 68  KPHPARDRDLCRFHADDYVAFLRSVTPETQQDQI--RALKRFNVGEDCPVFDGLYSFCQT 127

Query: 151 SAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLY 210
            AGGS+G AVKLN G  DIAINWAGGLHHAKK EASGFCYVNDIVL ILELLKYH+RVLY
Sbjct: 128 YAGGSVGGAVKLNHGH-DIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKYHQRVLY 187

Query: 211 IDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGM 270
           +DID+HHGDGVEEAFYTTDRVM+VSFHKFGD+FPGTG I+ +G   GK Y+LNVPL+DG+
Sbjct: 188 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGI 247

Query: 271 DDDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFN 330
           DD+S++ LF+PI+ KVMEV++P AVVLQCGADSL+GDRLGCFNLS++GHA+C+RF+RSFN
Sbjct: 248 DDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIRGHAECVRFMRSFN 307

Query: 331 VPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMEN 390
           VPL++LGGGGYTIRNVARCWCYET VA+G E  +K+P NEYFEYFGPDYTLH+ PSNMEN
Sbjct: 308 VPLLLLGGGGYTIRNVARCWCYETGVALGHELTDKMPPNEYFEYFGPDYTLHVAPSNMEN 367

Query: 391 LNSPKDMEKIRNTLLEQLSRLPHAPSVPFQ-MTPSSEVPEE 430
            N+ + ++ IR+ LL+ LS+L HAPSV FQ   P +E+PE+
Sbjct: 368 KNTRQQLDDIRSRLLDNLSKLRHAPSVQFQERPPEAELPEQ 405

[Close]

BLAST of CmaCh10G001020 vs. ExPASy Swiss-Prot
Match: P56521 (Probable histone deacetylase 19 OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 601.7 bits (1550), Expect = 1.7e-170
Identity = 276/401 (68.83%), Postives = 338/401 (84.29%), Query Frame = 0


Query: 31  GGASLPS-GPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEIN 90
           GG SLPS GPDG+KRRV YFY+P +G+YYYGQGHPMKPHRIRM H+L+  YGL  +M++ 
Sbjct: 9   GGNSLPSVGPDGQKRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVY 68

Query: 91  RPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQA 150
           RP PA   ++ RFH+++Y++FL SV+PET  D    R LKRFNVGE+CPV DGL+ FCQ 
Sbjct: 69  RPNPARERELCRFHAEEYINFLRSVTPETQQDQI--RLLKRFNVGEECPVLDGLYSFCQT 128

Query: 151 SAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLY 210
            AG S+G AVK N G  DIAINW+GGLHHAKK EASGFCYVNDIVL ILELLK+H RVLY
Sbjct: 129 YAGASVGGAVKFNHGH-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLY 188

Query: 211 IDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGM 270
           +DID+HHGDGVEEAFYTTDRVM+VSFHKFGD+FPGTG I+ +G   GK Y+LNVPL+DG+
Sbjct: 189 VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGHSKGKYYSLNVPLDDGI 248

Query: 271 DDDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFN 330
           DD+S++ LF+PI+ KVMEV++P AVVLQCGADSL+GDRLGCFNLS+KGHA+C+R++RSFN
Sbjct: 249 DDESYQSLFKPIMGKVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN 308

Query: 331 VPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMEN 390
           VPL++LGGGGYTIRNVARCWCYET VA+G EP++K+P NEY+EYFGPDYTLH+ PSNMEN
Sbjct: 309 VPLLLLGGGGYTIRNVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLHVAPSNMEN 368

Query: 391 LNSPKDMEKIRNTLLEQLSRLPHAPSVPFQ-MTPSSEVPEE 430
            N+ + ++ IR+    +LS+L HAPSV FQ   P +E+PE+
Sbjct: 369 KNTRQQLDDIRS----KLSKLRHAPSVHFQERVPDTEIPEQ 402

[Close]

BLAST of CmaCh10G001020 vs. ExPASy Swiss-Prot
Match: Q32PJ8 (Histone deacetylase 1 OS=Bos taurus OX=9913 GN=HDAC1 PE=2 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.2e-169
Identity = 270/433 (62.36%), Postives = 345/433 (79.68%), Query Frame = 0


Query: 41  GRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINRPYPAGSEDIR 100
           G KR+V Y+Y+  +G+YYYGQGHPMKPHRIRM HNL+++YGL+R+MEI RP+ A +E++ 
Sbjct: 6   GTKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMT 65

Query: 101 RFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQASAGGSIGAAVK 160
           ++HSDDY+ FL S+ P+ +S+  +S+ ++RFNVGEDCPVFDGLF FCQ S GGS+ +AVK
Sbjct: 66  KYHSDDYIKFLRSIRPDNMSE--YSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVK 125

Query: 161 LNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLYIDIDVHHGDGV 220
           LN+   DIA+NWAGGLHHAKKSEASGFCYVNDIVL ILELLKYH+RVLYIDID+HHGDGV
Sbjct: 126 LNKQQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGV 185

Query: 221 EEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGMDDDSFRGLFRP 280
           EEAFYTTDRVM+VSFHK+G++FPGTG ++ +GAG GK YA+N PL DG+DD+S+  +F+P
Sbjct: 186 EEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKP 245

Query: 281 IIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNVPLMVLGGGGY 340
           ++ KVME++QP AVVLQCG+DSL+GDRLGCFNL++KGHA C+ F++SFN+P+++LGGGGY
Sbjct: 246 VMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGY 305

Query: 341 TIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMENLNSPKDMEKIR 400
           TIRNVARCW YETAVA+  E  N+LPYN+YFEYFGPD+ LHI PSNM N N+ + +EKI+
Sbjct: 306 TIRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIK 365

Query: 401 NTLLEQLSRLPHAPSVPFQMTPSSEVPEERFLLLRSCWFFGGKVEENIDRR-----PKRR 460
             L E L  LPHAP V  Q  P   +PEE           G + EE+ D+R       +R
Sbjct: 366 QRLFENLRMLPHAPGVQMQAIPEDAIPEES----------GDEDEEDPDKRISICSSDKR 425

Query: 461 IWNGEDYDSAPEE 469
           I   E++  + EE
Sbjct: 426 IACEEEFSDSDEE 426

[Close]

BLAST of CmaCh10G001020 vs. ExPASy TrEMBL
Match: A0A6J1JDK9 (putative pentatricopeptide repeat-containing protein At1g64310 OS=Cucurbita maxima OX=3661 GN=LOC111485825 PE=4 SV=1)

HSP 1 Score: 1010.0 bits (2610), Expect = 7.6e-291
Identity = 500/527 (94.88%), Postives = 500/527 (94.88%), Query Frame = 0


Query: 491 MSFYLHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHV 550
           MSFYLHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHV
Sbjct: 1   MSFYLHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHV 60

Query: 551 FDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHR 610
           FDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHR
Sbjct: 61  FDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHR 120

Query: 611 ERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF 670
           ERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF
Sbjct: 121 ERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF 180

Query: 671 GYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE 730
           GYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE
Sbjct: 181 GYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE 240

Query: 731 H---------------------------PDLVTWSALITGYSQSGDFWKALFFFQKLNMQ 790
           H                           PDLVTWSALITGYSQSGDFWKALFFFQKLNMQ
Sbjct: 241 HVASALVSMYSRCNCMYSAYLVFISLIQPDLVTWSALITGYSQSGDFWKALFFFQKLNMQ 300

Query: 791 GMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLG 850
           GMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLG
Sbjct: 301 GMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLG 360

Query: 851 IRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHA 910
           IRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHA
Sbjct: 361 IRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHA 420

Query: 911 GLSSVGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGA 970
           GLSSVGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGA
Sbjct: 421 GLSSVGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGA 480

Query: 971 LLSCCDACGNLELAEIVAQKLLENNPHKMAYRVMLSNIYAGEGRWDD 991
           LLSCCDACGNLELAEIVAQKLLENNPHKMAYRVMLSNIYAGEGRWDD
Sbjct: 481 LLSCCDACGNLELAEIVAQKLLENNPHKMAYRVMLSNIYAGEGRWDD 527

[Close]

BLAST of CmaCh10G001020 vs. ExPASy TrEMBL
Match: A0A6J1E092 (putative pentatricopeptide repeat-containing protein At1g64310 OS=Cucurbita moschata OX=3662 GN=LOC111429654 PE=4 SV=1)

HSP 1 Score: 968.4 bits (2502), Expect = 2.5e-278
Identity = 480/527 (91.08%), Postives = 488/527 (92.60%), Query Frame = 0


Query: 491 MSFYLHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHV 550
           MSFYLHIL SELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSIN RLNYARHV
Sbjct: 1   MSFYLHILTSELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINGRLNYARHV 60

Query: 551 FDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHR 610
           FDKTPNR+VYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIR CAEN HR
Sbjct: 61  FDKTPNRTVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRACAENLHR 120

Query: 611 ERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF 670
           ERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF
Sbjct: 121 ERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF 180

Query: 671 GYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE 730
           GY GFWNQGLLLFS MRNLG HPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE
Sbjct: 181 GYRGFWNQGLLLFSSMRNLGEHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE 240

Query: 731 H---------------------------PDLVTWSALITGYSQSGDFWKALFFFQKLNMQ 790
           H                           PDLVTWSALITGYSQSGDFWKALFFFQKLNMQ
Sbjct: 241 HVASALVSMYSRCNCMDSAYLVFISLIQPDLVTWSALITGYSQSGDFWKALFFFQKLNMQ 300

Query: 791 GMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLG 850
           G KPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDS+EMVSSSLIDMYSKCGYLSLG
Sbjct: 301 GKKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSDEMVSSSLIDMYSKCGYLSLG 360

Query: 851 IRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHA 910
           IRVF+IMQRKGIVAYNSIIWGMGLHGLASKALE+FEE+L IGLMPNESTFSALLCACCHA
Sbjct: 361 IRVFYIMQRKGIVAYNSIIWGMGLHGLASKALETFEEMLGIGLMPNESTFSALLCACCHA 420

Query: 911 GLSSVGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGA 970
           GL+SVGKAIF+RM NEFGIKYRTEHYVYIVKLLGMSGE EEAY+LVLSLPEPVDSGVWGA
Sbjct: 421 GLNSVGKAIFKRMTNEFGIKYRTEHYVYIVKLLGMSGESEEAYDLVLSLPEPVDSGVWGA 480

Query: 971 LLSCCDACGNLELAEIVAQKLLENNPHKMAYRVMLSNIYAGEGRWDD 991
           LLSCCDACGNLELAEIVAQKLLENNP KMAYRVMLSNIYAGEGRWDD
Sbjct: 481 LLSCCDACGNLELAEIVAQKLLENNPDKMAYRVMLSNIYAGEGRWDD 527

[Close]

BLAST of CmaCh10G001020 vs. ExPASy TrEMBL
Match: A0A6J1JMW4 (Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111485826 PE=3 SV=1)

HSP 1 Score: 922.9 bits (2384), Expect = 1.2e-264
Identity = 442/456 (96.93%), Postives = 442/456 (96.93%), Query Frame = 0


Query: 25  MADDTYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR 84
           MADDTYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR
Sbjct: 1   MADDTYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR 60

Query: 85  RMEINRPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLF 144
           RMEINRPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLF
Sbjct: 61  RMEINRPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLF 120

Query: 145 GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH 204
           GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH
Sbjct: 121 GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH 180

Query: 205 RRVLYIDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVP 264
           RRVLYIDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVP
Sbjct: 181 RRVLYIDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVP 240

Query: 265 LNDGMDDDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRF 324
           LNDGMDDDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRF
Sbjct: 241 LNDGMDDDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRF 300

Query: 325 LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP 384
           LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP
Sbjct: 301 LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP 360

Query: 385 SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEERFLLLRSCWFFGGKV 444
           SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEE              V
Sbjct: 361 SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEE--------------V 420

Query: 445 EENIDRRPKRRIWNGEDYDSAPEENRKRPNMSEGHG 481
           EENIDRRPKRRIWNGEDYDSAPEENRKRPNMSEGHG
Sbjct: 421 EENIDRRPKRRIWNGEDYDSAPEENRKRPNMSEGHG 442

[Close]

BLAST of CmaCh10G001020 vs. ExPASy TrEMBL
Match: A0A6J1E376 (Histone deacetylase OS=Cucurbita moschata OX=3662 GN=LOC111430152 PE=3 SV=1)

HSP 1 Score: 907.5 bits (2344), Expect = 5.3e-260
Identity = 435/456 (95.39%), Postives = 437/456 (95.83%), Query Frame = 0


Query: 25  MADDTYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR 84
           MADD YG ASLPSGPDG KRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR
Sbjct: 1   MADDIYGSASLPSGPDGWKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR 60

Query: 85  RMEINRPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLF 144
           RMEINRPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLF
Sbjct: 61  RMEINRPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLF 120

Query: 145 GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH 204
           GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH
Sbjct: 121 GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH 180

Query: 205 RRVLYIDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVP 264
           RRVLYIDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIK VGAGSGKNYALNVP
Sbjct: 181 RRVLYIDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKDVGAGSGKNYALNVP 240

Query: 265 LNDGMDDDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRF 324
           LNDGMDDDSFRGLFRP+IQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCL F
Sbjct: 241 LNDGMDDDSFRGLFRPLIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLHF 300

Query: 325 LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP 384
           LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP
Sbjct: 301 LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP 360

Query: 385 SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEERFLLLRSCWFFGGKV 444
           SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEE              V
Sbjct: 361 SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEE--------------V 420

Query: 445 EENIDRRPKRRIWNGEDYDSAPEENRKRPNMSEGHG 481
           EENIDRRPKRRIWNGEDYDSAPEENRKRPN+SEGHG
Sbjct: 421 EENIDRRPKRRIWNGEDYDSAPEENRKRPNISEGHG 442

[Close]

BLAST of CmaCh10G001020 vs. ExPASy TrEMBL
Match: A0A6J1KY79 (Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111499812 PE=3 SV=1)

HSP 1 Score: 892.9 bits (2306), Expect = 1.3e-255
Identity = 426/456 (93.42%), Postives = 436/456 (95.61%), Query Frame = 0


Query: 25  MADDTYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR 84
           MADDTYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR
Sbjct: 1   MADDTYGGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHR 60

Query: 85  RMEINRPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLF 144
           RMEINRPYPAG+EDI+RFHSDDYVDFLASVSPETLSDH+FSR+LKRFNVGEDCPVFDGLF
Sbjct: 61  RMEINRPYPAGTEDIQRFHSDDYVDFLASVSPETLSDHSFSRYLKRFNVGEDCPVFDGLF 120

Query: 145 GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH 204
           GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH
Sbjct: 121 GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH 180

Query: 205 RRVLYIDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVP 264
           +RVLYIDIDVHHGDGVEEAFYTTDRVM+VSFHKFGDFFPGTGHIK VG GSGKNYALNVP
Sbjct: 181 KRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDVGVGSGKNYALNVP 240

Query: 265 LNDGMDDDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRF 324
           LNDGMDDDSFRGLFRP+IQKVMEVYQP+AVVLQCGADSLAGDRLGCFNLSVKGHADCLRF
Sbjct: 241 LNDGMDDDSFRGLFRPLIQKVMEVYQPDAVVLQCGADSLAGDRLGCFNLSVKGHADCLRF 300

Query: 325 LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP 384
           LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP
Sbjct: 301 LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP 360

Query: 385 SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEERFLLLRSCWFFGGKV 444
           SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEE              V
Sbjct: 361 SNMENLNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEE--------------V 420

Query: 445 EENIDRRPKRRIWNGEDYDSAPEENRKRPNMSEGHG 481
           EEN++RRPKRRIWNGEDYDS  EENRKRPN SEG G
Sbjct: 421 EENMERRPKRRIWNGEDYDSDAEENRKRPNNSEGPG 442

[Close]

BLAST of CmaCh10G001020 vs. NCBI nr
Match: KAF3633991.1 (Histone deacetylase 1 [Capsicum annuum])

HSP 1 Score: 1228.0 bits (3176), Expect = 0.0e+00
Identity = 622/993 (62.64%), Postives = 739/993 (74.42%), Query Frame = 0


Query: 31  GGASLPS-GPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEIN 90
           GGAS  S G D +KRRV+YF++P IGDYYYGQGHPMKPHRIR+AH+L+  Y LH  ME+ 
Sbjct: 8   GGASRCSPGTDAKKRRVSYFFDPYIGDYYYGQGHPMKPHRIRIAHHLVCQYRLHHYMELC 67

Query: 91  RPYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQA 150
           +P PA +E+I  FHS DYVDFL+SVSPETL +   S H+ RFNVG DCPVFDGLF FC+A
Sbjct: 68  KPLPATAENIGWFHSPDYVDFLSSVSPETLHEDYDSSHINRFNVGSDCPVFDGLFDFCRA 127

Query: 151 SAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLY 210
           SAGGS+GAA KLN  +ADIAINWAGGLHHAKKS ASGFCYVNDIVLGILELLK H+RVLY
Sbjct: 128 SAGGSLGAAAKLNSKEADIAINWAGGLHHAKKSAASGFCYVNDIVLGILELLKAHKRVLY 187

Query: 211 IDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGM 270
           +DIDVHHGDGVEEAFYTTDRVM+VSFHKFGDFFPGTGHIK +G G+GK Y+LN PLNDG+
Sbjct: 188 VDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGTGKYYSLNAPLNDGI 247

Query: 271 DDDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFN 330
           DD+SFR +FRP+IQKVMEVYQPEAVVLQCGADSLAGDRLG FNLS KGHADC+RFLRSFN
Sbjct: 248 DDESFRQVFRPVIQKVMEVYQPEAVVLQCGADSLAGDRLGFFNLSGKGHADCVRFLRSFN 307

Query: 331 VPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMEN 390
           VPLM++GGGGYTIRNVARCWCYETAVAVGVE  NKLP NEY  YF PDYTL++EP  MEN
Sbjct: 308 VPLMLVGGGGYTIRNVARCWCYETAVAVGVEVSNKLPDNEYSGYFAPDYTLNVEPLPMEN 367

Query: 391 LNSPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPS-SEVPEERFLLLRSCWFFGGKVEENI 450
            N P  +EKIRN LLEQLS LPH PSVPFQMTPS +E+PE+R              EE++
Sbjct: 368 KNPPWFLEKIRNMLLEQLSHLPHVPSVPFQMTPSIAEIPEKR--------------EEDM 427

Query: 451 DRRPKRRIWNGEDY--DSAPEENRKRPNMSEG---HGRRSFESRNPLMSFYLHILASELS 510
           D RPK  IW  EDY  D+  EEN  +  +S          F S N LM    + L S+LS
Sbjct: 428 DERPKPGIWLTEDYGSDTDEEENLTKAILSASLIQSPSWKFVS-NELMFIPFNSLLSQLS 487

Query: 511 KTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHVFDKTPNRSVYLWN 570
           K  L +  TK+LHA I KTHL+ DPFYATRI+R Y++N  +  A +VFDKTP+RS+YLWN
Sbjct: 488 KLKLPISTTKQLHAIIIKTHLSQDPFYATRILRFYALNYDIISAHNVFDKTPHRSIYLWN 547

Query: 571 SIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHRERLKLVHGRVLAS 630
           S+IRAYAKAHKF +A  LF  M  TE  PDNFTY+C++R  +ENF    L+++HG V+ S
Sbjct: 548 SLIRAYAKAHKFKDAFLLFKDMVNTEIKPDNFTYACLVRASSENFDVHSLRILHGGVVLS 607

Query: 631 GFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGFGYCGFWNQGLLLF 690
           G   D IC S LV+AYS L  I DA KVF  +  PDLV+WNS+ISG+G  G   +G+ LF
Sbjct: 608 GLQWDFICSSQLVSAYSRLGCIVDARKVFSGIIEPDLVLWNSMISGYGCLGELEKGMGLF 667

Query: 691 SRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNEH------------ 750
           SRM+ +G  PD YT+VG+   I +PS+L  G+ IHGFCL+  ++SN+H            
Sbjct: 668 SRMKKVGVRPDEYTMVGLIMTIDDPSVLKMGEAIHGFCLRLGIESNDHVNSLLVGMYSRC 727

Query: 751 ---------------PDLVTWSALITGYSQSGDFWKALFFFQKLNMQGMKPDAILIASIL 810
                          PDLVTWS+LI G+   GD  KAL FF+++NM+G K DA LIA+ L
Sbjct: 728 KRMDSAFSVFHRLVEPDLVTWSSLIGGFLFCGDSVKALDFFREMNMKGAKADASLIATAL 787

Query: 811 AAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLGIRVFHIMQRKGIV 870
            A +Q AN++PG EIHG A R G   + MV S+L+DMYSKCG+L LG RV+  M  K IV
Sbjct: 788 TACSQLANVQPGSEIHGSAFRHGYHLDVMVCSALVDMYSKCGFLELGYRVYRTMAIKNIV 847

Query: 871 AYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHAGLSSVGKAIFRRM 930
           +YNS+I   GL+GLAS+A + FEE L+ G  P+E+TFSALLCACCHAGL + G+  FR M
Sbjct: 848 SYNSVISSFGLYGLASQAFQVFEEALEEGHKPDEATFSALLCACCHAGLVNDGREYFRIM 907

Query: 931 RNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGALLSCCDACGNLEL 990
           +++FGI   TEHYVY+VKLLGM G+L EAY LV SL EP+DSG+WGALLSCCDA  N EL
Sbjct: 908 KDQFGISANTEHYVYMVKLLGMEGQLSEAYELVQSLQEPIDSGIWGALLSCCDAHRNYEL 967

[Close]

BLAST of CmaCh10G001020 vs. NCBI nr
Match: KAG2399200.1 (Histone deacetylase [Vigna angularis])

HSP 1 Score: 1061.2 bits (2743), Expect = 5.9e-306
Identity = 562/1067 (52.67%), Postives = 669/1067 (62.70%), Query Frame = 0


Query: 28  DTYGGASLPS-GPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRM 87
           +T  GASLPS G D  KRRVTYFYEP IGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRM
Sbjct: 8   ETESGASLPSVGTDAMKRRVTYFYEPCIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRM 67

Query: 88  EINRPYPAGSEDIRRFHSDDYVDFLASVSPETLSD--HAFSRHLKRFNVGEDCPVFDGLF 147
           ++NRP+PA   DI RFHSDDYV+FLASVSP+ LS+  H+  R LKRFNVGEDCPVFDGLF
Sbjct: 68  QVNRPFPAAEADIGRFHSDDYVEFLASVSPQILSENSHSHYRQLKRFNVGEDCPVFDGLF 127

Query: 148 GFCQASAGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYH 207
            FC+ASAGGSIGAAV+LNR DADIAINWAGGLHHAKK+EASGFCYVNDIVLGILELLK H
Sbjct: 128 DFCRASAGGSIGAAVRLNRADADIAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVH 187

Query: 208 RRVLYIDIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVP 267
           RRVLYIDIDVHHGDGVEEAFYTTDRVM+VSFHKFGDFFPGTGHIK +G G+GKNY+LNVP
Sbjct: 188 RRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIKDIGVGAGKNYSLNVP 247

Query: 268 LNDGMDDDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRF 327
           LNDG+DD++FR LFRP+IQKVM VYQP+AVVLQCGADSL+GDRLGCFNL+VKGHADCLRF
Sbjct: 248 LNDGLDDETFRSLFRPVIQKVMNVYQPDAVVLQCGADSLSGDRLGCFNLTVKGHADCLRF 307

Query: 328 LRSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEP 387
           LRSFNVPLMVLGGGGYT+RNVARCWCYETAVAVGVEP+ KLPYNEY+EYFGPDYTLH EP
Sbjct: 308 LRSFNVPLMVLGGGGYTVRNVARCWCYETAVAVGVEPNPKLPYNEYYEYFGPDYTLHPEP 367

Query: 388 SNMENLNSPKDMEKI--------------------------------RNTLLEQLSRLPH 447
           SNMENLN+P+D+EKI                                RN LLEQLS+LPH
Sbjct: 368 SNMENLNTPRDLEKIRLHYYTEFVMKIALCQLSNSQGENLLPINGLARNALLEQLSKLPH 427

Query: 448 APSVPFQMTPS-SEVPEERFLLLRSCWFFGGKVEENIDRRPKRRIWNGEDYDSAPEENRK 507
           APSVPFQ TPS  +VPEE               EE++D RPKRRIW+GED+DS  +++  
Sbjct: 428 APSVPFQTTPSIIQVPEEE--------------EEHMDIRPKRRIWSGEDFDSDNDDDMA 487

Query: 508 RPN---------------------------------MSEGHGRRSFESRNPLMSFYLH-- 567
                                               +      R F     +++F +H  
Sbjct: 488 SSKNSVLTAQTRVGSSVAKMMVCGVLALFVMPAFHFLQHFASDRMFALAKQILNFKIHKK 547

Query: 568 ---------------------------ILASELSKTYLTLLRTKELHAFITKTHLACDPF 627
                                       L SELS +  +LLR K+LHAF+ KTHL+ DPF
Sbjct: 548 VSAGSFITSFLLLPEVNIVSLMFVPFEWLHSELSNSCRSLLRVKQLHAFLLKTHLSEDPF 607

Query: 628 YATRIVRLYSINSRLNYARHVFDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTE 687
           YAT+IVR Y++NS +  A HVFDKT NRSVYLWNS+IRA+A++ +F + +SLF TM G +
Sbjct: 608 YATKIVRQYAVNSDIESAHHVFDKTSNRSVYLWNSMIRAFAQSQRFFSTISLFRTMLGAD 667

Query: 688 TLPDNFTYSCIIRVCAENFHRERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDAS 747
             PD  TY+C+IR CA+NF    L+  HG  +A+G GLDP+CCSAL+TAYS L L+ +A 
Sbjct: 668 ISPDGHTYACVIRACADNFDYGTLRRFHGGAVAAGLGLDPVCCSALMTAYSKLGLVHEAR 727

Query: 748 KVFDVMPHPDLVMWNSIISGFGYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPS 807
           +VF+ +  PD+V+WNS+ISG+G  G W+ G+ LFS M+ +G  PDGYT+ G+  G+ +  
Sbjct: 728 RVFNRITEPDIVLWNSLISGYGSSGLWDVGMQLFSAMKLVGKKPDGYTLAGLLVGVVDSG 787

Query: 808 LLSTGKGIHGFCLKCSLDSNEH---------------------------PDLVTWSALIT 867
           +LS G+G+H    K  LDS+ H                           PDLVTWSALI 
Sbjct: 788 MLSIGQGLHCLSQKSGLDSDSHVSSLLVSLYSRCKCMDYAYRVFCSILNPDLVTWSALIM 847

Query: 868 GYSQSGDFWKALFFFQKLNMQGMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDS 927
           GYSQ+G + K L+ F+KLNM+  K DA+L+AS+LA+ A++ N+  G E+HGYALR  ++ 
Sbjct: 848 GYSQAGVYEKVLYLFRKLNMEDRKADAVLVASVLASIARTTNVGLGCEVHGYALRHRLE- 907

Query: 928 NEMVSSSLIDMYSKCGYLSLGIRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELL 970
                                                                      L
Sbjct: 908 -----------------------------------------------------------L 935

[Close]

BLAST of CmaCh10G001020 vs. NCBI nr
Match: XP_022988637.1 (putative pentatricopeptide repeat-containing protein At1g64310 [Cucurbita maxima])

HSP 1 Score: 1010.0 bits (2610), Expect = 1.6e-290
Identity = 500/527 (94.88%), Postives = 500/527 (94.88%), Query Frame = 0


Query: 491 MSFYLHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHV 550
           MSFYLHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHV
Sbjct: 1   MSFYLHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHV 60

Query: 551 FDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHR 610
           FDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHR
Sbjct: 61  FDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHR 120

Query: 611 ERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF 670
           ERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF
Sbjct: 121 ERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF 180

Query: 671 GYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE 730
           GYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE
Sbjct: 181 GYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE 240

Query: 731 H---------------------------PDLVTWSALITGYSQSGDFWKALFFFQKLNMQ 790
           H                           PDLVTWSALITGYSQSGDFWKALFFFQKLNMQ
Sbjct: 241 HVASALVSMYSRCNCMYSAYLVFISLIQPDLVTWSALITGYSQSGDFWKALFFFQKLNMQ 300

Query: 791 GMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLG 850
           GMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLG
Sbjct: 301 GMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLG 360

Query: 851 IRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHA 910
           IRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHA
Sbjct: 361 IRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHA 420

Query: 911 GLSSVGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGA 970
           GLSSVGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGA
Sbjct: 421 GLSSVGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGA 480

Query: 971 LLSCCDACGNLELAEIVAQKLLENNPHKMAYRVMLSNIYAGEGRWDD 991
           LLSCCDACGNLELAEIVAQKLLENNPHKMAYRVMLSNIYAGEGRWDD
Sbjct: 481 LLSCCDACGNLELAEIVAQKLLENNPHKMAYRVMLSNIYAGEGRWDD 527

[Close]

BLAST of CmaCh10G001020 vs. NCBI nr
Match: XP_023515752.1 (putative pentatricopeptide repeat-containing protein At1g64310 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 986.5 bits (2549), Expect = 1.8e-283
Identity = 488/537 (90.88%), Postives = 501/537 (93.30%), Query Frame = 0


Query: 481 RRSFESRNPLMSFYLHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSI 540
           R SFESRNPLMSFYLHIL SELSKT+LTLLRTKELHAFITKTHLACDPFYATRIVRLYSI
Sbjct: 33  RSSFESRNPLMSFYLHILTSELSKTHLTLLRTKELHAFITKTHLACDPFYATRIVRLYSI 92

Query: 541 NSRLNYARHVFDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCI 600
           NSRLNYARHVFDKTPNR+VYLWNSIIRAYAKA+KFGNALSLFFTMFGT+TLPDNFTYSCI
Sbjct: 93  NSRLNYARHVFDKTPNRTVYLWNSIIRAYAKANKFGNALSLFFTMFGTQTLPDNFTYSCI 152

Query: 601 IRVCAENFHRERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDL 660
           IR CAENFHRE+LKLVHGRVL SGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDL
Sbjct: 153 IRACAENFHREQLKLVHGRVLVSGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDL 212

Query: 661 VMWNSIISGFGYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGF 720
           VMWNSIISGFGY GFWNQGLLLFSRMRNLG HPDGYTVVGVASGIAEPSLLSTGKGIHGF
Sbjct: 213 VMWNSIISGFGYRGFWNQGLLLFSRMRNLGEHPDGYTVVGVASGIAEPSLLSTGKGIHGF 272

Query: 721 CLKCSLDSNEH---------------------------PDLVTWSALITGYSQSGDFWKA 780
           CLKCSLDSNEH                           PDLVTWSALITGYSQSGDFWKA
Sbjct: 273 CLKCSLDSNEHVASALVSMYSRCNCMDSAYLVFISLIQPDLVTWSALITGYSQSGDFWKA 332

Query: 781 LFFFQKLNMQGMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDM 840
           LFFFQKLNMQG KPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDS+EMVSSSLIDM
Sbjct: 333 LFFFQKLNMQGKKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSDEMVSSSLIDM 392

Query: 841 YSKCGYLSLGIRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTF 900
           YSKCGYLSLGIRVFHIMQRKGIVAYNSIIWGMGLHG+ASKALE+FEE+L IGLMPNESTF
Sbjct: 393 YSKCGYLSLGIRVFHIMQRKGIVAYNSIIWGMGLHGVASKALETFEEMLGIGLMPNESTF 452

Query: 901 SALLCACCHAGLSSVGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLP 960
           SALLCACCHAGL+SVGKAIF+RMRNEFGIKYRTEHYVYIVKLLGMSG+LEEAY+LVLSLP
Sbjct: 453 SALLCACCHAGLNSVGKAIFKRMRNEFGIKYRTEHYVYIVKLLGMSGKLEEAYDLVLSLP 512

Query: 961 EPVDSGVWGALLSCCDACGNLELAEIVAQKLLENNPHKMAYRVMLSNIYAGEGRWDD 991
           EPVDSGVWGALLSCCDACGNLELAEIVAQKLLENNP KMAYRVMLSNIYAGEGRWDD
Sbjct: 513 EPVDSGVWGALLSCCDACGNLELAEIVAQKLLENNPDKMAYRVMLSNIYAGEGRWDD 569

[Close]

BLAST of CmaCh10G001020 vs. NCBI nr
Match: KAG6589426.1 (putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 976.1 bits (2522), Expect = 2.5e-280
Identity = 482/527 (91.46%), Postives = 493/527 (93.55%), Query Frame = 0


Query: 491 MSFYLHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHV 550
           MSFYLHIL SELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHV
Sbjct: 1   MSFYLHILTSELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHV 60

Query: 551 FDKTPNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHR 610
           FDKTPNR+VYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPD+FTYSCIIR CAENFHR
Sbjct: 61  FDKTPNRTVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDSFTYSCIIRACAENFHR 120

Query: 611 ERLKLVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF 670
           ERLKLVHGRVL SGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF
Sbjct: 121 ERLKLVHGRVLVSGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGF 180

Query: 671 GYCGFWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE 730
           GY GFWNQGLLLFSRMRNLG HPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE
Sbjct: 181 GYRGFWNQGLLLFSRMRNLGEHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNE 240

Query: 731 H---------------------------PDLVTWSALITGYSQSGDFWKALFFFQKLNMQ 790
           H                           PDLVTWSALITGYSQSGDFWKALFFFQKLNMQ
Sbjct: 241 HVASALVSMYSRCNCMDSAYLVFISLIQPDLVTWSALITGYSQSGDFWKALFFFQKLNMQ 300

Query: 791 GMKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLG 850
           G KPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDS+EMVSSSLID+YSKCGYLSLG
Sbjct: 301 GKKPDAILIASILAAAAQSANIRPGIEIHGYALRQGIDSDEMVSSSLIDIYSKCGYLSLG 360

Query: 851 IRVFHIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHA 910
           IRVFHIMQRKGIVAYNS+IWGMGLHGLASKALE+FEE+LDIGLMPNESTFSALLCACCHA
Sbjct: 361 IRVFHIMQRKGIVAYNSMIWGMGLHGLASKALETFEEMLDIGLMPNESTFSALLCACCHA 420

Query: 911 GLSSVGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGA 970
           GL+SVGKAIF+RMR+EFGIKYRTEHYVYIVKLLGMSGELEEAY+LVLSLPEPVDSGVWGA
Sbjct: 421 GLNSVGKAIFKRMRDEFGIKYRTEHYVYIVKLLGMSGELEEAYDLVLSLPEPVDSGVWGA 480

Query: 971 LLSCCDACGNLELAEIVAQKLLENNPHKMAYRVMLSNIYAGEGRWDD 991
           LLSCCDACGNLELAEIVAQKLLENNP KMAYRVMLSNIYAGEGRWDD
Sbjct: 481 LLSCCDACGNLELAEIVAQKLLENNPDKMAYRVMLSNIYAGEGRWDD 527

[Close]

BLAST of CmaCh10G001020 vs. TAIR 10
Match: AT5G63110.1 (histone deacetylase 6 )

HSP 1 Score: 733.0 bits (1891), Expect = 3.4e-211
Identity = 354/441 (80.27%), Postives = 389/441 (88.21%), Query Frame = 0


Query: 32  GASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINRP 91
           G SLPSGPDGRKRRV+YFYEPTIGDYYYGQGHPMKPHRIRMAH+LI+HY LHRR+EI+RP
Sbjct: 7   GISLPSGPDGRKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRP 66

Query: 92  YPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQASA 151
             A + DI RFHS +YVDFLASVSPE++ D + +R+L+RFNVGEDCPVFDGLF FC+ASA
Sbjct: 67  SLADASDIGRFHSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASA 126

Query: 152 GGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLYID 211
           GGSIGAAVKLNR DADIAINW GGLHHAKKSEASGFCYVNDIVLGILELLK  +RVLYID
Sbjct: 127 GGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYID 186

Query: 212 IDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGMDD 271
           IDVHHGDGVEEAFYTTDRVM+VSFHKFGDFFPGTGHI+ VGA  GK YALNVPLNDGMDD
Sbjct: 187 IDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLNDGMDD 246

Query: 272 DSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNVP 331
           +SFR LFRP+IQKVMEVYQPEAVVLQCGADSL+GDRLGCFNLSVKGHADCLRFLRS+NVP
Sbjct: 247 ESFRSLFRPLIQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVP 306

Query: 332 LMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMENLN 391
           LMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLH++PS MENLN
Sbjct: 307 LMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPSPMENLN 366

Query: 392 SPKDMEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEERFLLLRSCWFFGGKVEENIDRR 451
           +PKDME+IRNTLLEQLS L HAPSV FQ TP    P  R L          + E++++ R
Sbjct: 367 TPKDMERIRNTLLEQLSGLIHAPSVQFQHTP----PVNRVL---------DEPEDDMETR 426

Query: 452 PKRRIWNG-EDYDSAPEENRK 472
           PK RIW+G   Y+S  +++ K
Sbjct: 427 PKPRIWSGTATYESDSDDDDK 434

[Close]

BLAST of CmaCh10G001020 vs. TAIR 10
Match: AT4G38130.1 (histone deacetylase 1 )

HSP 1 Score: 630.9 bits (1626), Expect = 1.8e-180
Identity = 287/399 (71.93%), Postives = 340/399 (85.21%), Query Frame = 0


Query: 31  GGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINR 90
           GG SL SGPDG KR+V YFY+P +G+YYYGQGHPMKPHRIRM H L+ HYGL + M++ +
Sbjct: 4   GGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLK 63

Query: 91  PYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQAS 150
           P+PA   D+ RFH+DDYV FL S++PET  D    R LKRFNVGEDCPVFDGL+ FCQ  
Sbjct: 64  PFPARDRDLCRFHADDYVSFLRSITPETQQDQI--RQLKRFNVGEDCPVFDGLYSFCQTY 123

Query: 151 AGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLYI 210
           AGGS+G +VKLN G  DIAINWAGGLHHAKK EASGFCYVNDIVL ILELLK H RVLY+
Sbjct: 124 AGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYV 183

Query: 211 DIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGMD 270
           DID+HHGDGVEEAFY TDRVM+VSFHKFGD+FPGTGHI+ +G GSGK Y+LNVPL+DG+D
Sbjct: 184 DIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGID 243

Query: 271 DDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNV 330
           D+S+  LF+PI+ KVME+++P AVVLQCGADSL+GDRLGCFNLS+KGHA+C++F+RSFNV
Sbjct: 244 DESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNV 303

Query: 331 PLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMENL 390
           PL++LGGGGYTIRNVARCWCYET VA+GVE ++K+P +EY+EYFGPDYTLH+ PSNMEN 
Sbjct: 304 PLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMENK 363

Query: 391 NSPKDMEKIRNTLLEQLSRLPHAPSVPFQ-MTPSSEVPE 429
           NS + +E+IRN LL  LS+L HAPSVPFQ   P +E PE
Sbjct: 364 NSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTETPE 400

[Close]

BLAST of CmaCh10G001020 vs. TAIR 10
Match: AT4G38130.2 (histone deacetylase 1 )

HSP 1 Score: 630.9 bits (1626), Expect = 1.8e-180
Identity = 287/399 (71.93%), Postives = 340/399 (85.21%), Query Frame = 0


Query: 31  GGASLPSGPDGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINR 90
           GG SL SGPDG KR+V YFY+P +G+YYYGQGHPMKPHRIRM H L+ HYGL + M++ +
Sbjct: 4   GGNSLASGPDGVKRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLK 63

Query: 91  PYPAGSEDIRRFHSDDYVDFLASVSPETLSDHAFSRHLKRFNVGEDCPVFDGLFGFCQAS 150
           P+PA   D+ RFH+DDYV FL S++PET  D    R LKRFNVGEDCPVFDGL+ FCQ  
Sbjct: 64  PFPARDRDLCRFHADDYVSFLRSITPETQQDQI--RQLKRFNVGEDCPVFDGLYSFCQTY 123

Query: 151 AGGSIGAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLYI 210
           AGGS+G +VKLN G  DIAINWAGGLHHAKK EASGFCYVNDIVL ILELLK H RVLY+
Sbjct: 124 AGGSVGGSVKLNHGLCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYV 183

Query: 211 DIDVHHGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGMD 270
           DID+HHGDGVEEAFY TDRVM+VSFHKFGD+FPGTGHI+ +G GSGK Y+LNVPL+DG+D
Sbjct: 184 DIDIHHGDGVEEAFYATDRVMTVSFHKFGDYFPGTGHIQDIGYGSGKYYSLNVPLDDGID 243

Query: 271 DDSFRGLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNV 330
           D+S+  LF+PI+ KVME+++P AVVLQCGADSL+GDRLGCFNLS+KGHA+C++F+RSFNV
Sbjct: 244 DESYHLLFKPIMGKVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNV 303

Query: 331 PLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMENL 390
           PL++LGGGGYTIRNVARCWCYET VA+GVE ++K+P +EY+EYFGPDYTLH+ PSNMEN 
Sbjct: 304 PLLLLGGGGYTIRNVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMENK 363

Query: 391 NSPKDMEKIRNTLLEQLSRLPHAPSVPFQ-MTPSSEVPE 429
           NS + +E+IRN LL  LS+L HAPSVPFQ   P +E PE
Sbjct: 364 NSRQMLEEIRNDLLHNLSKLQHAPSVPFQERPPDTETPE 400

[Close]

BLAST of CmaCh10G001020 vs. TAIR 10
Match: AT5G35600.1 (histone deacetylase7 )

HSP 1 Score: 516.2 bits (1328), Expect = 6.6e-146
Identity = 252/394 (63.96%), Postives = 298/394 (75.63%), Query Frame = 0


Query: 40  DGRKRRVTYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYGLHRRMEINRPYPAGSEDI 99
           DG KRRV+YFYEP IGDYYYG   P KP RIR+ HNLI+ Y LHR MEIN P  A + D 
Sbjct: 6   DGGKRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDF 65

Query: 100 RRFHSDDYVDFLASVSPETLSD--HAFSRHLKRFNVGEDC--PVFDGLFGFCQASAGGSI 159
            +FHS +Y++FL SV+PET++D   + S +LKRFNV  D   PVF  LF +C+A AGGSI
Sbjct: 66  EKFHSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSI 125

Query: 160 GAAVKLNRGDADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRVLYIDIDVH 219
            AA KLNR +ADIAINWAGG+HH KK +ASGF YVND+VL ILELLK  +RVLYI+I   
Sbjct: 126 SAAAKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFP 185

Query: 220 HGDGVEEAFYTTDRVMSVSFHKFGDFFPGTGHIKHVGAGSGKNYALNVPLNDGMDDDSFR 279
           HGD VEEAF  TDRVM+VSFHK GD    TG I   G G G+ Y+LN PL DG+DD S R
Sbjct: 186 HGDEVEEAFKDTDRVMTVSFHKVGD----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLR 245

Query: 280 GLFRPIIQKVMEVYQPEAVVLQCGADSLAGDRLGCFNLSVKGHADCLRFLRSFNVPLMVL 339
           GLF P+I + ME+Y+PE +VLQCGADSLAGD  G FNLS+KGH DCL+++RSFNVPLM+L
Sbjct: 246 GLFIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVPLMIL 305

Query: 340 GGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHIEPSNMENLNSPKD 399
           GGGGYT+ NVARCWCYETA+AVG + DN LP N+Y +YF PDY LHI P+N +NLN+  D
Sbjct: 306 GGGGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHILPTNRQNLNTRLD 365

Query: 400 MEKIRNTLLEQLSRLPHAPSVPFQMTPSSEVPEE 430
           +  +R TLL QLS + HAPSVPFQ TPSS    E
Sbjct: 366 IITMRETLLAQLSLVMHAPSVPFQDTPSSSQATE 395

[Close]

BLAST of CmaCh10G001020 vs. TAIR 10
Match: AT1G64310.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 513.5 bits (1321), Expect = 4.3e-145
Identity = 250/524 (47.71%), Postives = 357/524 (68.13%), Query Frame = 0


Query: 495 LHILASELSKTYLTLLRTKELHAFITKTHLACDPFYATRIVRLYSINSRLNYARHVFDKT 554
           L ++  E ++   T L T++LH+F+TK+ LA DP++AT++ R Y++N  L  AR +FD  
Sbjct: 7   LRLIIYEFTRKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVF 66

Query: 555 PNRSVYLWNSIIRAYAKAHKFGNALSLFFTMFGTETLPDNFTYSCIIRVCAENFHRERLK 614
           P RSV+LWNSIIRAYAKAH+F   LSLF  +  ++T PDNFTY+C+ R  +E+F  + L+
Sbjct: 67  PERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLR 126

Query: 615 LVHGRVLASGFGLDPICCSALVTAYSNLDLIEDASKVFDVMPHPDLVMWNSIISGFGYCG 674
            +HG  + SG G D IC SA+V AYS   LI +ASK+F  +P PDL +WN +I G+G CG
Sbjct: 127 CIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCG 186

Query: 675 FWNQGLLLFSRMRNLGGHPDGYTVVGVASGIAEPSLLSTGKGIHGFCLKCSLDSNEH--- 734
           FW++G+ LF+ M++ G  P+ YT+V + SG+ +PSLL     +H FCLK +LDS+ +   
Sbjct: 187 FWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGC 246

Query: 735 ------------------------PDLVTWSALITGYSQSGDFWKALFFFQKLNMQGMKP 794
                                   PDLV  S+LITGYS+ G+  +AL  F +L M G KP
Sbjct: 247 ALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKP 306

Query: 795 DAILIASILAAAAQSANIRPGIEIHGYALRQGIDSNEMVSSSLIDMYSKCGYLSLGIRVF 854
           D +L+A +L + A+ ++   G E+H Y +R G++ +  V S+LIDMYSKCG L   + +F
Sbjct: 307 DCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLF 366

Query: 855 HIMQRKGIVAYNSIIWGMGLHGLASKALESFEELLDIGLMPNESTFSALLCACCHAGLSS 914
             +  K IV++NS+I G+GLHG AS A E F E+L++GL+P+E TFSALLC CCH+GL +
Sbjct: 367 AGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLN 426

Query: 915 VGKAIFRRMRNEFGIKYRTEHYVYIVKLLGMSGELEEAYNLVLSLPEPVDSGVWGALLSC 974
            G+ IF RM++EFGI+ +TEHYVY+VKL+GM+G+LEEA+  V+SL +P+DSG+ GALLSC
Sbjct: 427 KGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSC 486

Query: 975 CDACGNLELAEIVAQKLLENNPHKMA-YRVMLSNIYAGEGRWDD 991
           C+   N  LAE+VA+ + +N   + + Y+VMLSN+YA  GRWD+
Sbjct: 487 CEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDE 530

The following BLAST results are available for this feature:

BLAST of CmaCh10G001020 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FML2	4.8e-210	80.27	Histone deacetylase 6 OS=Arabidopsis thaliana OX=3702 GN=HDA6 PE=1 SV=1	[more]
O22446	2.6e-179	71.93	Histone deacetylase 19 OS=Arabidopsis thaliana OX=3702 GN=HDA19 PE=1 SV=2	[more]
Q7Y0Y8	5.6e-174	71.07	Histone deacetylase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDAC1 PE=1 SV=...	[more]
P56521	1.7e-170	68.83	Probable histone deacetylase 19 OS=Zea mays OX=4577 PE=2 SV=1	[more]
Q32PJ8	3.2e-169	62.36	Histone deacetylase 1 OS=Bos taurus OX=9913 GN=HDAC1 PE=2 SV=1	[more]

BLAST of CmaCh10G001020 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JDK9	7.6e-291	94.88	putative pentatricopeptide repeat-containing protein At1g64310 OS=Cucurbita maxi...	[more]
A0A6J1E092	2.5e-278	91.08	putative pentatricopeptide repeat-containing protein At1g64310 OS=Cucurbita mosc...	[more]
A0A6J1JMW4	1.2e-264	96.93	Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111485826 PE=3 SV=1	[more]
A0A6J1E376	5.3e-260	95.39	Histone deacetylase OS=Cucurbita moschata OX=3662 GN=LOC111430152 PE=3 SV=1	[more]
A0A6J1KY79	1.3e-255	93.42	Histone deacetylase OS=Cucurbita maxima OX=3661 GN=LOC111499812 PE=3 SV=1	[more]

BLAST of CmaCh10G001020 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF3633991.1	0.0e+00	62.64	Histone deacetylase 1 [Capsicum annuum]	[more]
KAG2399200.1	5.9e-306	52.67	Histone deacetylase [Vigna angularis]	[more]
XP_022988637.1	1.6e-290	94.88	putative pentatricopeptide repeat-containing protein At1g64310 [Cucurbita maxima...	[more]
XP_023515752.1	1.8e-283	90.88	putative pentatricopeptide repeat-containing protein At1g64310 [Cucurbita pepo s...	[more]
KAG6589426.1	2.5e-280	91.46	putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyros...	[more]

BLAST of CmaCh10G001020 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G63110.1	3.4e-211	80.27	histone deacetylase 6	[more]
AT4G38130.1	1.8e-180	71.93	histone deacetylase 1	[more]
AT4G38130.2	1.8e-180	71.93	histone deacetylase 1	[more]
AT5G35600.1	6.6e-146	63.96	histone deacetylase7	[more]
AT1G64310.1	4.3e-145	47.71	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003084	Histone deacetylase	PRINTS	PR01271	HISDACETLASE	coord: 269..287 score: 48.18 coord: 252..265 score: 71.15 coord: 98..116 score: 53.85 coord: 152..172 score: 59.89 coord: 131..148 score: 82.91 coord: 193..209 score: 85.52 coord: 65..82 score: 70.73
IPR000286	Histone deacetylase family	PRINTS	PR01270	HDASUPER	coord: 291..301 score: 60.31 coord: 206..221 score: 73.08 coord: 174..197 score: 65.79
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 616..713 e-value: 5.0E-14 score: 54.0 coord: 721..790 e-value: 8.2E-9 score: 37.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 804..1001 e-value: 1.2E-31 score: 112.2 coord: 481..615 e-value: 5.2E-12 score: 47.8
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 735..769 e-value: 0.0031 score: 15.6 coord: 661..694 e-value: 0.002 score: 16.2 coord: 872..902 e-value: 0.0029 score: 15.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 834..882 e-value: 1.0E-8 score: 35.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 661..690 e-value: 7.9E-4 score: 19.5 coord: 631..655 e-value: 1.2 score: 9.5 coord: 735..762 e-value: 2.1E-4 score: 21.3 coord: 561..585 e-value: 0.0067 score: 16.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 659..693 score: 10.413293
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 803..837 score: 9.20755
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 733..767 score: 11.257313
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 558..592 score: 9.097937
IPR023801	Histone deacetylase domain	PFAM	PF00850	Hist_deacetyl	coord: 63..354 e-value: 1.3E-85 score: 287.6
IPR037138	Histone deacetylase domain superfamily	GENE3D	3.40.800.20	Histone deacetylase domain	coord: 42..417 e-value: 4.5E-138 score: 462.2
None	No IPR available	PIRSR	PIRSR037913-1	PIRSR037913-1	coord: 43..410 e-value: 1.1E-182 score: 604.9
None	No IPR available	PIRSR	PIRSR037913-2	PIRSR037913-2	coord: 43..410 e-value: 1.1E-182 score: 604.9
None	No IPR available	PIRSR	PIRSR037913-3	PIRSR037913-3	coord: 43..410 e-value: 1.1E-182 score: 604.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 458..483
None	No IPR available	PANTHER	PTHR10625:SF197	HISTONE DEACETYLASE	coord: 30..475
None	No IPR available	PANTHER	PTHR10625	HISTONE DEACETYLASE	coord: 30..475
None	No IPR available	CDD	cd09991	HDAC_classI	coord: 49..356 e-value: 0.0 score: 631.54
IPR023696	Ureohydrolase domain superfamily	SUPERFAMILY	52768	Arginase/deacetylase	coord: 44..409

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G001020.1	CmaCh10G001020.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006325	chromatin organization
biological_process	GO:0070932	histone H3 deacetylation
biological_process	GO:0016575	histone deacetylation
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0032041	NAD-dependent histone deacetylase activity (H3-K14 specific)
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004407	histone deacetylase activity