CmaCh10G000580 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G000580
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Nuclear transcription factor Y subunit C
Location	Cma_Chr10: 216025 .. 218070 (+)
RNA-Seq Expression	CmaCh10G000580
Synteny	CmaCh10G000580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCGTAGCTCCAGAGTGATAGGCTAATTTAACTGTTTGCTCCAAAAGATGTAATTACTTTTACTTGTACATTCGAGGGCCATTATATCACCCAGTACAATATTCACTCTTTTTAATGATAAATCCAGTTCGTGCAAATCTGAGTTGTTGGATATACATATATCTGGATGGTGCATGGCTCTTGATTTCCTTTACAAAATTCTTGCTTCCCTGCCTGGCTGCCTACAGAGAATGCAGCTCGAAGTCAAATGATCCGAAGAGAAAAGGAATATATGTTAATTGTGGAAAGGTGTTTATAGTTCCATTTTGATTGTTGCCTCTCATATGTTTTTTGTGTGATGGGGTAGTAGGAATGGAATATATATGATGATCTGTCTGAGGAGATTGAAATAGACTTCACAACCTCACAGTGTGTTTGACTGGAAGAATCCAAATCTGATCTGTTGAGAAAGAAGGCTAAATCGTAGATTATGGAAGAGGTACATTCTTATTCTCTTGGGTTCATTTAACGTTGCAGGAAAATGAAGGGCGCATAATATGTGGTCTGCTTTCCAAAGCATCAACAACTGGGTACGCACTTTGACTGACTGAATTAATGTGTGAAATTTTGTTGGTTGTTCACAGTTCATTCTTAGAGCTTTCTAGAAAATAGATTATAAAGGGCACTGAATAATGGATGGTTGGTTTATTGCGTTGAAGTGTGTGTGTGTGTGTGCTGATACTGAAATACAAGAGAAGTGGTTTGAAAATAAAGAGGGAAATAGAGAGAAAGAAGTGAGAAGTGAGTGGGCATGTGGTTAAAGAAAAGGCATTGTCTGCCGCAATGCCAAACCTACTTTTGGCCACTGGACAACTTGTACAGCTTCTTGCAGAAACTTCTTCGGGGCTTTTGGGGGCTCAACACTTTTCTTTTTCTTTTTCTTTTTCTTTAATTAAACCAGGAAAAGGAAAAAAAGCATTGTTCTTCTTTTGCAATAAAAGTTTTAGAACAAATTTTGGTCTGAATTAATCTCATTTCTTTTGTATGCCATCAAATTAGGTTTTAGAATTCCATGTTTCAACTTTGTACTCAAAAAGGAAAGAAGTGATTAATTAAATAATTATATTGAAAAATAAAGAAATTAGGGGAGATGAAATGTTTAAAGCGCAGAGGTGGAGGGTGGAGGTAGGGAAACGAATCCTCTGACTCAAAGCCTGTTTCTTTCCTTATCTCAATTCTCAACTCTTTTGGGAGTTCCTTCGTTCTTCCCTTTTTTTAAACCTCTCGTCCCCCAAATCTCTTCCTCAAATCTGCTCCTCACTTAGATCCCACCATCCTCCCATTAAATCCCCTGCTGCATTTGGCCAAGCCCTTCTGGAACTGCCGCCGTCGTCGGCCGATGGAGAGCAACAACCAAGCCCAATCCTCCCCTTACCCTCCTCCTCAGGCCCCTGTTCCGGCCCCTCCCTTACACCACCTCCTTCAGCAGCAGCAGCAACAGCTTCAGATGTTCTGGTCCTTTCAGCGCCAAGAAATCGAACAGGTTAACGACTTTAAAAACCATCAGCTTCCTTTGGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTGCGTATGATATCCGCTGAGGCACCCATTTTGTTCGCCAAGGCGTGCGAGCTCTTCATTCTTGAACTCACGATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCAGCGGCCATCACGAGGACCGATATCTTTGATTTCTTGGTTGATATTGTGCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGTGGCATGGTTGGAGCCACTGCCAGTGGAGTGCCGTACTATTATCCGCCTATGGGCCAACCGGCAGGTCCCCCTGGGGGGATGATGATTGGGAGACCGGCAATGGATCCCACCGGAGTCTACGCTCAGCCGCCGTCGCAGGCGTGGCAATCGGTGTGGCAGCCCGCCGCAGAGGATGGTTCTTACGCGAGTGGGGGCAGCAGCGGGCAGGGCAATCTTGATGGTCAGAGGTAG

mRNA sequence

ATGGCATCGTAGCTCCAGAGTGATAGGCTAATTTAACTGTTTGCTCCAAAAGATTTCGTGCAAATCTGAGTTGTTGGATATACATATATCTGGATGGTGCATGGCTCTTGATTTCCTTTACAAAATTCTTGCTTCCCTGCCTGGCTGCCTACAGAGAATGCAGCTCGAAGTCAAATGATCCGAAGAGAAAAGGAATATATGTTAATTGTGGAAAGGTGTTTATAGTTCCATTTTGATTGTTGCCTCTCATATGTTTTTTGTGTGATGGGGTAGTAGGAATGGAATATATATGATGATCTGTCTGAGGAGATTGAAATAGACTTCACAACCTCACAGTGTGTTTGACTGGAAGAATCCAAATCTGATCTGTTGAGAAAGAAGGCTAAATCGTAGATTATGGAAGAGGTACATTCTTATTCTCTTGGGTTCATTTAACGTTGCAGGAAAATGAAGGGCGCATAATATGTGGTCTGCTTTCCAAAGCATCAACAACTGGGTACGCACTTTGACTGACTGAATTAATGTGTGAAATTTTGTTGGTTGTTCACAGTTCATTCTTAGAGCTTTCTAGAAAATAGATTATAAAGGGCACTGAATAATGGATGGTTGGTTTATTGCGTTGAAGTGTGTGTGTGTGTGTGCTGATACTGAAATACAAGAGAAGTGGTTTGAAAATAAAGAGGGAAATAGAGAGAAAGAAGTGAGAAATCCCACCATCCTCCCATTAAATCCCCTGCTGCATTTGGCCAAGCCCTTCTGGAACTGCCGCCGTCGTCGGCCGATGGAGAGCAACAACCAAGCCCAATCCTCCCCTTACCCTCCTCCTCAGGCCCCTGTTCCGGCCCCTCCCTTACACCACCTCCTTCAGCAGCAGCAGCAACAGCTTCAGATGTTCTGGTCCTTTCAGCGCCAAGAAATCGAACAGGTTAACGACTTTAAAAACCATCAGCTTCCTTTGGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTGCGTATGATATCCGCTGAGGCACCCATTTTGTTCGCCAAGGCGTGCGAGCTCTTCATTCTTGAACTCACGATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCAGCGGCCATCACGAGGACCGATATCTTTGATTTCTTGGTTGATATTGTGCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGTGGCATGGTTGGAGCCACTGCCAGTGGAGTGCCGTACTATTATCCGCCTATGGGCCAACCGGCAGGTCCCCCTGGGGGGATGATGATTGGGAGACCGGCAATGGATCCCACCGGAGTCTACGCTCAGCCGCCGTCGCAGGCGTGGCAATCGGTGTGGCAGCCCGCCGCAGAGGATGGTTCTTACGCGAGTGGGGGCAGCAGCGGGCAGGGCAATCTTGATGGTCAGAGGTAG

Coding sequence (CDS)

ATGGATGGTTGGTTTATTGCGTTGAAGTGTGTGTGTGTGTGTGCTGATACTGAAATACAAGAGAAGTGGTTTGAAAATAAAGAGGGAAATAGAGAGAAAGAAGTGAGAAATCCCACCATCCTCCCATTAAATCCCCTGCTGCATTTGGCCAAGCCCTTCTGGAACTGCCGCCGTCGTCGGCCGATGGAGAGCAACAACCAAGCCCAATCCTCCCCTTACCCTCCTCCTCAGGCCCCTGTTCCGGCCCCTCCCTTACACCACCTCCTTCAGCAGCAGCAGCAACAGCTTCAGATGTTCTGGTCCTTTCAGCGCCAAGAAATCGAACAGGTTAACGACTTTAAAAACCATCAGCTTCCTTTGGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTGCGTATGATATCCGCTGAGGCACCCATTTTGTTCGCCAAGGCGTGCGAGCTCTTCATTCTTGAACTCACGATTAGGTCATGGCTCCACGCGGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCAGCGGCCATCACGAGGACCGATATCTTTGATTTCTTGGTTGATATTGTGCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGTGGCATGGTTGGAGCCACTGCCAGTGGAGTGCCGTACTATTATCCGCCTATGGGCCAACCGGCAGGTCCCCCTGGGGGGATGATGATTGGGAGACCGGCAATGGATCCCACCGGAGTCTACGCTCAGCCGCCGTCGCAGGCGTGGCAATCGGTGTGGCAGCCCGCCGCAGAGGATGGTTCTTACGCGAGTGGGGGCAGCAGCGGGCAGGGCAATCTTGATGGTCAGAGGTAG

Protein sequence

MDGWFIALKCVCVCADTEIQEKWFENKEGNREKEVRNPTILPLNPLLHLAKPFWNCRRRRPMESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQR

Homology

[Close]

BLAST of CmaCh10G000580 vs. ExPASy Swiss-Prot
Match: Q9SMP0 (Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NFYC1 PE=1 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.6e-93
Identity = 190/234 (81.20%), Postives = 199/234 (85.04%), Query Frame = 0


Query: 62  MESNNQ-----AQSSPYPPPQAPVPA----PPLHHLLQQQQQQLQMFWSFQRQEIEQVND 121
           M++NNQ     A   P PPP   + A       HHLLQQQQQQLQ+FW++QRQEIEQVND
Sbjct: 1   MDTNNQQPPPSAAGIPPPPPGTTISAAGGGASYHHLLQQQQQQLQLFWTYQRQEIEQVND 60

Query: 122 FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ 181
           FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ
Sbjct: 61  FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ 120

Query: 182 KNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGPP 241
           KNDIAAAITRTDIFDFLVDIVPRDEIKDEA +  GGMV A TASGVPYYYPPMGQPAG P
Sbjct: 121 KNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGVPYYYPPMGQPAG-P 180

Query: 242 GGMMIGRPAMDPTGVYAQPPSQAWQSVWQPA---AEDGSYASGGSSGQGNLDGQ 281
           GGMMIGRPAMDP GVY QPPSQAWQSVWQ +    +D SY SGGSSGQGNLDGQ
Sbjct: 181 GGMMIGRPAMDPNGVYVQPPSQAWQSVWQTSTGTGDDVSYGSGGSSGQGNLDGQ 233

[Close]

BLAST of CmaCh10G000580 vs. ExPASy Swiss-Prot
Match: Q9FMV5 (Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NFYC4 PE=1 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.2e-90
Identity = 187/245 (76.33%), Postives = 196/245 (80.00%), Query Frame = 0


Query: 64  SNNQAQSSP---YPPPQA---PVPAPP-------------LHHLLQQQQQQLQMFWSFQR 123
           +NN  Q  P   YPP  A    +P PP              HHLLQQQQQQLQMFW++QR
Sbjct: 6   NNNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGATYHHLLQQQQQQLQMFWTYQR 65

Query: 124 QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE 183
           QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE
Sbjct: 66  QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE 125

Query: 184 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYY 243
           ENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYY
Sbjct: 126 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYY 185

Query: 244 YPPMGQPAGPPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQPAA---EDGSYASGGSSGQG 281
           YPPMGQPA  PGGMMIGRPAMDP+GVYAQPPSQAWQSVWQ +A   +D SY SGGSSG G
Sbjct: 186 YPPMGQPA-VPGGMMIGRPAMDPSGVYAQPPSQAWQSVWQNSAGGGDDVSYGSGGSSGHG 245

[Close]

BLAST of CmaCh10G000580 vs. ExPASy Swiss-Prot
Match: A6BLW4 (Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39947 GN=NFYC2 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.9e-59
Identity = 136/221 (61.54%), Postives = 151/221 (68.33%), Query Frame = 0


Query: 72  PYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQ--VNDFKNHQLPLARIKKIMKA 131
           P  P     PA P HHLLQQQQ QLQ FW++QRQE E+   +DFKNHQLPLARIKKIMKA
Sbjct: 22  PGVPGAGGPPAVPHHHLLQQQQAQLQAFWAYQRQEAERASASDFKNHQLPLARIKKIMKA 81

Query: 132 DEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFL 191
           DEDVRMISAEAP+LFAKACELFILELTIRSWLHAEENKRRTLQ+ND+AAAI RTD+FDFL
Sbjct: 82  DEDVRMISAEAPVLFAKACELFILELTIRSWLHAEENKRRTLQRNDVAAAIARTDVFDFL 141

Query: 192 VDIVPRDEIKDEAG------LGGMVGAT-----ASGVPYYYPPMGQPAGPPGGMMIGRPA 251
           VDIVPR+E K+E G       GG  GA      A+G+PYYYPPMGQPA       +  PA
Sbjct: 142 VDIVPREEAKEEPGSALGFAAGGPAGAVGAAGPAAGLPYYYPPMGQPAPMMPAWHV--PA 201

Query: 252 MDPTGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDG 280
            DP          AWQ    P  + G+  S    GQ    G
Sbjct: 202 WDP----------AWQQGAAPDVDQGAAGSFSEEGQQGFAG 230

[Close]

BLAST of CmaCh10G000580 vs. ExPASy Swiss-Prot
Match: Q9ZVL3 (Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NFYC3 PE=1 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.4e-52
Identity = 119/186 (63.98%), Postives = 135/186 (72.58%), Query Frame = 0


Query: 83  PPLHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA 142
           P  H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISA
Sbjct: 32  PAYHQIHQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISA 91

Query: 143 EAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEI 202
           EAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA+TRTDIFDFLVDIVPR+++
Sbjct: 92  EAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDL 151

Query: 203 KDEA-GLGGMVGATASGVPY-YYPPMGQPAGPPGGMMIGRPAMDPTGVYAQPPSQAWQSV 262
           +DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ  
Sbjct: 152 RDEVLGGVGAEAATAAGYPYGYLPPGTAPIGNP-GMVMGNPGAYPPNPYMGQP--MWQ-- 211

[Close]

BLAST of CmaCh10G000580 vs. ExPASy Swiss-Prot
Match: Q8LCG7 (Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NFYC2 PE=1 SV=2)

HSP 1 Score: 206.5 bits (524), Expect = 4.1e-52
Identity = 103/137 (75.18%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 86  HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFA 145
           HH  QQQQQQLQMFW+ Q QEIE   DFKNH LPLARIKKIMKADEDVRMISAEAP++FA
Sbjct: 45  HHHQQQQQQQLQMFWANQMQEIEHTTDFKNHTLPLARIKKIMKADEDVRMISAEAPVIFA 104

Query: 146 KACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLG 205
           KACE+FILELT+R+W+H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E GLG
Sbjct: 105 KACEMFILELTLRAWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEE-GLG 164

Query: 206 ---GMVGATASGVPYYY 220
              G + +     PYYY
Sbjct: 165 VTKGTIPSVVGSPPYYY 180

[Close]

BLAST of CmaCh10G000580 vs. ExPASy TrEMBL
Match: A0A6J1JJG4 (nuclear transcription factor Y subunit C-1 OS=Cucurbita maxima OX=3661 GN=LOC111484989 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 3.4e-118
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 62  MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 121
           MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 122 RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 181
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 182 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 241
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 180

Query: 242 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 281
           TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ
Sbjct: 181 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 219

[Close]

BLAST of CmaCh10G000580 vs. ExPASy TrEMBL
Match: A0A6J1E6P4 (nuclear transcription factor Y subunit C-1-like OS=Cucurbita moschata OX=3662 GN=LOC111429907 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 7.6e-118
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 62  MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 121
           MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 122 RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 181
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 182 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 241
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGG+MIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGLMIGRPAMDP 180

Query: 242 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 281
           TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ
Sbjct: 181 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 219

[Close]

BLAST of CmaCh10G000580 vs. ExPASy TrEMBL
Match: A0A6J1C352 (nuclear transcription factor Y subunit C-1-like OS=Momordica charantia OX=3673 GN=LOC111007012 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 7.1e-116
Identity = 216/219 (98.63%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 62  MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 121
           MESNNQAQSSPYPPPQAPVPAPP HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 122 RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 181
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 182 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 241
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAG PGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 242 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 281
           TGVYAQPPSQAWQSVWQ AAEDGSYASGGSSGQGNLDGQ
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGGSSGQGNLDGQ 219

[Close]

BLAST of CmaCh10G000580 vs. ExPASy TrEMBL
Match: A0A5D3BF73 (Nuclear transcription factor Y subunit C-1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold350G00510 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.5e-115
Identity = 214/220 (97.27%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 62  MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 121
           M++NNQAQSSPYPPPQAPVPAPP HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 122 RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 181
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 182 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 241
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAG PGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 242 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQR 282
           TGVYAQPPSQAWQSVWQ AAEDGSYASG SSGQGNLDGQR
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQR 220

[Close]

BLAST of CmaCh10G000580 vs. ExPASy TrEMBL
Match: A0A0A0LNK7 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G001515 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.7e-114
Identity = 213/219 (97.26%), Postives = 215/219 (98.17%), Query Frame = 0


Query: 62  MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 121
           M++NNQAQSSPYPPPQAPVPAPP HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MDANNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 122 RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 181
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 182 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 241
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAG PGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 242 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 281
           TGVYAQPPSQAWQSVWQ AAEDGSYASG SSGQGNLDGQ
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQ 219

[Close]

BLAST of CmaCh10G000580 vs. NCBI nr
Match: KAG7023061.1 (Nuclear transcription factor Y subunit C-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 436.8 bits (1122), Expect = 1.4e-118
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 62  MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 121
           MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 122 RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 181
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 182 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 241
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 180

Query: 242 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQR 282
           TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQR
Sbjct: 181 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQR 220

[Close]

BLAST of CmaCh10G000580 vs. NCBI nr
Match: XP_022987443.1 (nuclear transcription factor Y subunit C-1 [Cucurbita maxima] >XP_023516854.1 nuclear transcription factor Y subunit C-1 [Cucurbita pepo subsp. pepo] >KAG6589382.1 Nuclear transcription factor Y subunit C-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 434.5 bits (1116), Expect = 7.0e-118
Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 62  MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 121
           MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 122 RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 181
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 182 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 241
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 180

Query: 242 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 281
           TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ
Sbjct: 181 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 219

[Close]

BLAST of CmaCh10G000580 vs. NCBI nr
Match: XP_022921750.1 (nuclear transcription factor Y subunit C-1-like [Cucurbita moschata])

HSP 1 Score: 433.3 bits (1113), Expect = 1.6e-117
Identity = 218/219 (99.54%), Postives = 219/219 (100.00%), Query Frame = 0


Query: 62  MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 121
           MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 122 RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 181
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 182 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 241
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGG+MIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGLMIGRPAMDP 180

Query: 242 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 281
           TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ
Sbjct: 181 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 219

[Close]

BLAST of CmaCh10G000580 vs. NCBI nr
Match: XP_022134838.1 (nuclear transcription factor Y subunit C-1-like [Momordica charantia])

HSP 1 Score: 426.8 bits (1096), Expect = 1.5e-115
Identity = 216/219 (98.63%), Postives = 216/219 (98.63%), Query Frame = 0


Query: 62  MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 121
           MESNNQAQSSPYPPPQAPVPAPP HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MESNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 122 RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 181
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 182 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 241
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAG PGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 242 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQ 281
           TGVYAQPPSQAWQSVWQ AAEDGSYASGGSSGQGNLDGQ
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGGSSGQGNLDGQ 219

[Close]

BLAST of CmaCh10G000580 vs. NCBI nr
Match: KAA0057769.1 (nuclear transcription factor Y subunit C-1 [Cucumis melo var. makuwa] >TYJ98450.1 nuclear transcription factor Y subunit C-1 [Cucumis melo var. makuwa])

HSP 1 Score: 424.5 bits (1090), Expect = 7.3e-115
Identity = 214/220 (97.27%), Postives = 216/220 (98.18%), Query Frame = 0


Query: 62  MESNNQAQSSPYPPPQAPVPAPPLHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 121
           M++NNQAQSSPYPPPQAPVPAPP HHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA
Sbjct: 1   MDTNNQAQSSPYPPPQAPVPAPPFHHLLQQQQQQLQMFWSFQRQEIEQVNDFKNHQLPLA 60

Query: 122 RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 181
           RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT
Sbjct: 61  RIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAIT 120

Query: 182 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGPPGGMMIGRPAMDP 241
           RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAG PGGMMIGRPAMDP
Sbjct: 121 RTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDP 180

Query: 242 TGVYAQPPSQAWQSVWQPAAEDGSYASGGSSGQGNLDGQR 282
           TGVYAQPPSQAWQSVWQ AAEDGSYASG SSGQGNLDGQR
Sbjct: 181 TGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQR 220

[Close]

BLAST of CmaCh10G000580 vs. TAIR 10
Match: AT3G48590.1 (nuclear factor Y, subunit C1 )

HSP 1 Score: 344.0 bits (881), Expect = 1.2e-94
Identity = 190/234 (81.20%), Postives = 199/234 (85.04%), Query Frame = 0


Query: 62  MESNNQ-----AQSSPYPPPQAPVPA----PPLHHLLQQQQQQLQMFWSFQRQEIEQVND 121
           M++NNQ     A   P PPP   + A       HHLLQQQQQQLQ+FW++QRQEIEQVND
Sbjct: 1   MDTNNQQPPPSAAGIPPPPPGTTISAAGGGASYHHLLQQQQQQLQLFWTYQRQEIEQVND 60

Query: 122 FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ 181
           FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ
Sbjct: 61  FKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQ 120

Query: 182 KNDIAAAITRTDIFDFLVDIVPRDEIKDEAGL--GGMVGA-TASGVPYYYPPMGQPAGPP 241
           KNDIAAAITRTDIFDFLVDIVPRDEIKDEA +  GGMV A TASGVPYYYPPMGQPAG P
Sbjct: 121 KNDIAAAITRTDIFDFLVDIVPRDEIKDEAAVLGGGMVVAPTASGVPYYYPPMGQPAG-P 180

Query: 242 GGMMIGRPAMDPTGVYAQPPSQAWQSVWQPA---AEDGSYASGGSSGQGNLDGQ 281
           GGMMIGRPAMDP GVY QPPSQAWQSVWQ +    +D SY SGGSSGQGNLDGQ
Sbjct: 181 GGMMIGRPAMDPNGVYVQPPSQAWQSVWQTSTGTGDDVSYGSGGSSGQGNLDGQ 233

[Close]

BLAST of CmaCh10G000580 vs. TAIR 10
Match: AT5G63470.1 (nuclear factor Y, subunit C4 )

HSP 1 Score: 333.6 bits (854), Expect = 1.6e-91
Identity = 187/245 (76.33%), Postives = 196/245 (80.00%), Query Frame = 0


Query: 64  SNNQAQSSP---YPPPQA---PVPAPP-------------LHHLLQQQQQQLQMFWSFQR 123
           +NN  Q  P   YPP  A    +P PP              HHLLQQQQQQLQMFW++QR
Sbjct: 6   NNNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGATYHHLLQQQQQQLQMFWTYQR 65

Query: 124 QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE 183
           QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE
Sbjct: 66  QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE 125

Query: 184 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYY 243
           ENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYY
Sbjct: 126 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYY 185

Query: 244 YPPMGQPAGPPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQPAA---EDGSYASGGSSGQG 281
           YPPMGQPA  PGGMMIGRPAMDP+GVYAQPPSQAWQSVWQ +A   +D SY SGGSSG G
Sbjct: 186 YPPMGQPA-VPGGMMIGRPAMDPSGVYAQPPSQAWQSVWQNSAGGGDDVSYGSGGSSGHG 245

[Close]

BLAST of CmaCh10G000580 vs. TAIR 10
Match: AT5G63470.2 (nuclear factor Y, subunit C4 )

HSP 1 Score: 333.6 bits (854), Expect = 1.6e-91
Identity = 187/245 (76.33%), Postives = 196/245 (80.00%), Query Frame = 0


Query: 64  SNNQAQSSP---YPPPQA---PVPAPP-------------LHHLLQQQQQQLQMFWSFQR 123
           +NN  Q  P   YPP  A    +P PP              HHLLQQQQQQLQMFW++QR
Sbjct: 6   NNNNQQPPPTSVYPPGSAVTTVIPPPPSGSASIVTGGGATYHHLLQQQQQQLQMFWTYQR 65

Query: 124 QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE 183
           QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE
Sbjct: 66  QEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAE 125

Query: 184 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDE------AGLGGMVGATASGVPYY 243
           ENKRRTLQKNDIAAAITRTDIFDFLVDIVPR+EIK+E       G GGMV   ASGVPYY
Sbjct: 126 ENKRRTLQKNDIAAAITRTDIFDFLVDIVPREEIKEEEDAASALGGGGMVAPAASGVPYY 185

Query: 244 YPPMGQPAGPPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQPAA---EDGSYASGGSSGQG 281
           YPPMGQPA  PGGMMIGRPAMDP+GVYAQPPSQAWQSVWQ +A   +D SY SGGSSG G
Sbjct: 186 YPPMGQPA-VPGGMMIGRPAMDPSGVYAQPPSQAWQSVWQNSAGGGDDVSYGSGGSSGHG 245

[Close]

BLAST of CmaCh10G000580 vs. TAIR 10
Match: AT1G54830.2 (nuclear factor Y, subunit C3 )

HSP 1 Score: 207.2 bits (526), Expect = 1.7e-53
Identity = 119/186 (63.98%), Postives = 135/186 (72.58%), Query Frame = 0


Query: 83  PPLHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA 142
           P  H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISA
Sbjct: 32  PAYHQIHQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISA 91

Query: 143 EAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEI 202
           EAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA+TRTDIFDFLVDIVPR+++
Sbjct: 92  EAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDL 151

Query: 203 KDEA-GLGGMVGATASGVPY-YYPPMGQPAGPPGGMMIGRPAMDPTGVYAQPPSQAWQSV 262
           +DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ  
Sbjct: 152 RDEVLGGVGAEAATAAGYPYGYLPPGTAPIGNP-GMVMGNPGAYPPNPYMGQP--MWQ-- 211

[Close]

BLAST of CmaCh10G000580 vs. TAIR 10
Match: AT1G54830.1 (nuclear factor Y, subunit C3 )

HSP 1 Score: 207.2 bits (526), Expect = 1.7e-53
Identity = 119/186 (63.98%), Postives = 135/186 (72.58%), Query Frame = 0


Query: 83  PPLHHLLQQQQ----QQLQMFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISA 142
           P  H + QQQQ    QQLQ FW  Q +EIE+  DFKNH LPLARIKKIMKADEDVRMISA
Sbjct: 32  PAYHQIHQQQQQQLTQQLQSFWETQFKEIEKTTDFKNHSLPLARIKKIMKADEDVRMISA 91

Query: 143 EAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEI 202
           EAP++FA+ACE+FILELT+RSW H EENKRRTLQKNDIAAA+TRTDIFDFLVDIVPR+++
Sbjct: 92  EAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAVTRTDIFDFLVDIVPREDL 151

Query: 203 KDEA-GLGGMVGATASGVPY-YYPPMGQPAGPPGGMMIGRPAMDPTGVYAQPPSQAWQSV 262
           +DE  G  G   ATA+G PY Y PP   P G P GM++G P   P   Y   P   WQ  
Sbjct: 152 RDEVLGGVGAEAATAAGYPYGYLPPGTAPIGNP-GMVMGNPGAYPPNPYMGQP--MWQ-- 211

The following BLAST results are available for this feature:

BLAST of CmaCh10G000580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SMP0	1.6e-93	81.20	Nuclear transcription factor Y subunit C-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9FMV5	2.2e-90	76.33	Nuclear transcription factor Y subunit C-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
A6BLW4	5.9e-59	61.54	Nuclear transcription factor Y subunit C-2 OS=Oryza sativa subsp. japonica OX=39...	[more]
Q9ZVL3	2.4e-52	63.98	Nuclear transcription factor Y subunit C-3 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8LCG7	4.1e-52	75.18	Nuclear transcription factor Y subunit C-2 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CmaCh10G000580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JJG4	3.4e-118	100.00	nuclear transcription factor Y subunit C-1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1E6P4	7.6e-118	99.54	nuclear transcription factor Y subunit C-1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1C352	7.1e-116	98.63	nuclear transcription factor Y subunit C-1-like OS=Momordica charantia OX=3673 G...	[more]
A0A5D3BF73	3.5e-115	97.27	Nuclear transcription factor Y subunit C-1 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0LNK7	1.7e-114	97.26	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0015...	[more]

BLAST of CmaCh10G000580 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7023061.1	1.4e-118	100.00	Nuclear transcription factor Y subunit C-1, partial [Cucurbita argyrosperma subs...	[more]
XP_022987443.1	7.0e-118	100.00	nuclear transcription factor Y subunit C-1 [Cucurbita maxima] >XP_023516854.1 nu...	[more]
XP_022921750.1	1.6e-117	99.54	nuclear transcription factor Y subunit C-1-like [Cucurbita moschata]	[more]
XP_022134838.1	1.5e-115	98.63	nuclear transcription factor Y subunit C-1-like [Momordica charantia]	[more]
KAA0057769.1	7.3e-115	97.27	nuclear transcription factor Y subunit C-1 [Cucumis melo var. makuwa] >TYJ98450....	[more]

BLAST of CmaCh10G000580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G48590.1	1.2e-94	81.20	nuclear factor Y, subunit C1	[more]
AT5G63470.1	1.6e-91	76.33	nuclear factor Y, subunit C4	[more]
AT5G63470.2	1.6e-91	76.33	nuclear factor Y, subunit C4	[more]
AT1G54830.2	1.7e-53	63.98	nuclear factor Y, subunit C3	[more]
AT1G54830.1	1.7e-53	63.98	nuclear factor Y, subunit C3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 117..180 e-value: 3.4E-17 score: 62.5
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 85..195 e-value: 6.9E-46 score: 157.3
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 87..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..84
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 65..280
None	No IPR available	PANTHER	PTHR10252:SF107	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4	coord: 65..280

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G000580.1	CmaCh10G000580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific
molecular_function	GO:0046982	protein heterodimerization activity