CmaCh10G000230 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh10G000230
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Rubredoxin family protein
Location	Cma_Chr10: 88436 .. 92684 (+)
RNA-Seq Expression	CmaCh10G000230
Synteny	CmaCh10G000230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACAGGATTTGGCTATGGACTGCGTGTACTTCGGAGACAGATGCATCTCCTTCAGCAACGTGATCGTCCATCAGAGGCTCTAAAGGTAAAGATCGCCGAGTTGGAGAGATTTAGGAAGAAGAAGAAAAGTGTCAAGCAGTTCCTTGTGGACGTTCCTGAATCAAAATCCTTTCTTGACACTGCTTCTATGCCCATGATTCTAACTGCGGTTGGAGTTGCTCTCTTTGCTAAACTCCTTATGATGGTATGCCCTACTCCTGAACTTGGTTCTCATTTTTGTTCCTCCATTGCCTTTATTTTATTGAGTAAAATGAAATATAATGAGATGTGTGTGTGTGTGTGTGTGTGTGTGTAGTAGTCTAGGACATGTATAGAAATCTCAATAAGAATAGCTTATTCTTCTTCTTCTTCTTCCTTTTTTTTTTTTTTTTTTTTTGTGAGATTCTCCAACTCTGTGAAATTGTTGAGGAACAGAAGCACACTCCAATGTAGGTGTGTGAACGAAGGAAATTTTTGTGGATGTGGTCGTTGTGCTTTATTTTGCATTTTATTAATGTCGCTAGTTTGCCTGTGCTCGTAAGAATCTAGGAGGACATACCCTGTCTCGTTCAATTAATGCTATGCTTTCAGGAAAATGTGAAGCCCTTTTAATGAAATTTTGACCTTATTTTAGCATATGCTGTGGATGTATAGTACAAGTTCAGTCCCCACCTGGGTTGGGTTTATTTCAAGCAAATCTTATTTATCTCTTTTAATATGCGACTGTGCTTGTTTTCAGTATGATGAGTCAAGATCTGAAGAGCTGATAGAACGCAAAATAAAGAATTCTCCGGCAGGTCAAGGAACTGTGAGGATGCTTAGTCGGGAGGAGTGGGAGGAAATGCGAGAGGTTCGACCAAGGACTCCGTTTGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTTTACACAGGGTAAGGCAGTTGTATCACTGATCTCATATAGGAATTGATGTGAAAGCCTCCACATTTCCCTTCTTTTATCCCATCCCTTAATGATGATAACGTGCTTCCCCATTTCCATGCTTATTACAGATTTGTGTGATCTACTTTGTAGAAACTTTCCAGTTTCTATAAGTTATATGGTTGAATTTTCAACTTCTGCAGTTGCCATTCAAATTTTTTAAATGATTTTTTGTCGTTAGAAGAGACGACATCCTATGTAATTTTATAGACCTATAGATGTATGCGGCATGTGGATTGGGGGCAGGTTGACCAGGGAGTGATAATTTTTTAAAAGTACTTTCTTTGGCAATCGTTTCATGCAGGAAGATTTGAAGGACTGGACGGTTGATGTGCTATCAAATGCACTTACTCGGGCGGAAGAAAGTGTGAGGCATGATTCTACTTCCAAGTGACTTCTCCGAAGGGCCTTCTCCTAGATGTGGAGACTTTCAAACTCATCTGAGTTGGTGTCTGGTCATGCAAAATTGTTTTGTTGGGCGCAACTCCTGAAAATGTGCTTTGAAGGATGGTTGGTTAGTAACACATTTCAAAAATTAGTTTGTTTCTATGTGTTGATCTGATTTTGATCATGTAGATCTCCTACATGATATTTTATGTAGAGAACAATCAGGTCGCTATGAACCGGGATAGAGATAGTAGGTAATTTGATTGTGACTGAATCGCCAGTAGGTGGTGGAAAAGCTTAGGTAGTGGTGAGTGGGAATATGCAATTCGGGGGTTTGGCGACAGAAACTATTATTTGTATTTATTAGATTTGCAATTTTGATCTCCTTGTTTTAACGATGGATTCTTTTGTTCTCCTTCAACCCTTTTGTTCTTCCCTTATCTTTGAGGCAAACTGTGATTTATTTATTAGGATCTCCAAGACACTATTAATTGTTAAGGACGACGGATGGTTAAACGCAGGTCCTCGTCTCTGAATGCAGGGTACAACCGAGTTGAATCTTTTTATTAACCACGGTTAAATTTGATACAGCGTTTTATTATTATTTTTTTTTAATAGGAAAAAAAAAGTCTCTGTAACTGTTATGGTCAAGTCAAAGCTTCTGCATTCCTTTTCTTTACTTTTAATTGCACGAAACACATATGTCGAGGGAGTGTATTACAAACAACAAATGTATACTTGAACGTTCATAAGGTAAATGCGGTACCTTGGTGTTACAGAAAGAGAATAAAACAACTCAGAATCAAATAAAATTTGTTACATAGATTTTGTTCAAATTTTTAATATTTTGCTATATGTTGTTTTTAGTTAATTGAACTATAGTTAGTAAAAAGGGTTTTAAAGTTTAATTACTTCTATAAATTTAGATTTCTTGATTTGAATTAGTGGGTAAAAAATGTATGGTAGTGTAAGTTTGCAGAGACATGAGAGTGTAGAGAGGAGGATTGGATCAAAATGATTGGCAAGATTGATGGATTGTCGGCCACTCATAGTTTGACCCATTCTCTCTGTTTTGTCGCCTCCATCTCTCAGCTTACCTCTCTGCTCGGTGCTTCCCATCCTCCTCTCTCTTTTCAGCTTTCTTATTACCTCACCATCAATGGCTTCTTTTTCAGCTTCTTCTCTCAGCTTCCACCTACCGCCGAATCCACATTCCAAGATTAACCAGGTTCTCCTCTCATTCTTCTTCACACCTTAATTTACACTTCCACTTGCATTGCTCTTTTCCTTCTTCCTGCTGTGTTCGACACCTTCCTCCATCTCTTGATTCTTTTCTTCTTCAGTTTAATTATCAGTTATAATTGATGATCATTTATTTAAGGAAGACGGCGGCGCTGATAGGGACTCCATGCTTTGGGGCTCTGCCTCCAACCGCTCATCTTTGAAATCCTCCTTCATCTCTCCCCTACCTCAGATTCCCTCCACAAGGAAGCAAAAGTGTGCTGTTGCAGCTGCCCCCAAGTTCTCCCTGCGCGTCGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTACCACTCCGTATCTCTCCTTCCATTCCGCTTTTGAGCCTAATTTACATGTTAATTTCCCCCATCTTTGTAAAGCTCTCTTTTGGACCAATATGTAGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAACTATTTCTGTCCTGGTAATTTGCTTCTGTCTTCTTCCACCTTCTTTCCAAACGTAATTCGTATAATCCTCGTGTCTACCAGTTCAAACCAATTTCTTGAATTGCCTCGTCAATCGGGCCAATTACTTTACTGACGTTGGGTCGCGTTCATTTTTAGCACAATTAAGCTCCTGCTATTATTTTAAACTGAGAACTTAAAAAGGATATCTTCAAGAACCAAAGAAACAGAACTTCTAGAACATAAAGTTCTCTTCCTGTCAGCGAAACCAACTTCCAATCATTTGCATTTGCTTTCAATAAAGAAGTTGAAATCTAATACAAGTTGTCGTGCCTTGGCAGTCTGTGGTGCTCCTAAGCGACGATTTAGACCTTATGAGCAATCAGTGACTAAAAATGATAACGAATTTGATGCGAGGAAGGCAAGAAAGGCGCAGATTCAGAAAGATGAAGCTATTGGGTAAGAGGGAAAATCAAACTACTCTTTGTAAATGATCATAGATTTTAATGATTGTTCATTCAGTCTGATTGATATCACGTAAAACGGTATAGGAAGGTGCTGCCTATTGCCGCTGCAGTGGGAATCGTGGCACTTGTAGGTTTATACCTGTACCTGAATAGCGTCTTTTAGATCGAGTGGCTTGCTCGATGACGGGGGCTTGACATCATTTGTTTCATCATTTTCTTCCCGAGGCTGTTTTTTATTGATTTAAATATTAAATGTATTTTTTCGACCCACTTTCCGAAAACACTGGCAAATTGTTTATTGAGCGTTTATTTACACTCAGCAGAATAGCCATTGGATCATATATGAACTGCCCATCGCCTTACCTTAGTTTATGTACCTGTGGATGTGGCTTTGGGTGTAATACTGACTTTGGGGTGATTATATCTTGGAAGATTTTGTTTAACCAGTTCTTTCATGGACTGGACAATTGATGTGCTTTTGGATTCGCTTATTCAGGGAGAAGGAAGTGTTAGACACGTTTCTAAGCGACCGCCCTCAACATTGTCCTAAATTGTGGGACAAATCAGGCTCACCTACACTTCCTTTATGGTTATGTAAAACTATTTAAGGTGCAGAACCAGGAAGTGTGCTTCCCAGGATGGTTAGCAAGGCATCTGAGAAATGA

mRNA sequence

ATGACAGGATTTGGCTATGGACTGCGTGTACTTCGGAGACAGATGCATCTCCTTCAGCAACGTGATCGTCCATCAGAGGCTCTAAAGGTAAAGATCGCCGAGTTGGAGAGATTTAGGAAGAAGAAGAAAAGTGTCAAGCAGTTCCTTGTGGACGTTCCTGAATCAAAATCCTTTCTTGACACTGCTTCTATGCCCATGATTCTAACTGCGGTTGGAGTTGCTCTCTTTGCTAAACTCCTTATGATGTATGATGAGTCAAGATCTGAAGAGCTGATAGAACGCAAAATAAAGAATTCTCCGGCAGGTCAAGGAACTGTGAGGATGCTTAGTCGGGAGGAGTGGGAGGAAATGCGAGAGGTTCGACCAAGGACTCCGTTTGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTTTACACAGGATCTCCTACATGATATTTTATGTAGAGAACAATCAGGTCGCTATGAACCGGGATAGAGATAGTAGCTTACCTCTCTGCTCGGTGCTTCCCATCCTCCTCTCTCTTTTCAGCTTTCTTATTACCTCACCATCAATGGCTTCTTTTTCAGCTTCTTCTCTCAGCTTCCACCTACCGCCGAATCCACATTCCAAGATTAACCAGGAAGACGGCGGCGCTGATAGGGACTCCATGCTTTGGGGCTCTGCCTCCAACCGCTCATCTTTGAAATCCTCCTTCATCTCTCCCCTACCTCAGATTCCCTCCACAAGGAAGCAAAAGTGTGCTGTTGCAGCTGCCCCCAAGTTCTCCCTGCGCGTCGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAACTATTTCTGTCCTGTCTGTGGTGCTCCTAAGCGACGATTTAGACCTTATGAGCAATCAGTGACTAAAAATGATAACGAATTTGATGCGAGGAAGGCAAGAAAGGCGCAGATTCAGAAAGATGAAGCTATTGGGAAGGTGCTGCCTATTGCCGCTGCAGTGGGAATCGTGGCACTTGTAGGTGCAGAACCAGGAAGTGTGCTTCCCAGGATGGTTAGCAAGGCATCTGAGAAATGA

Coding sequence (CDS)

ATGACAGGATTTGGCTATGGACTGCGTGTACTTCGGAGACAGATGCATCTCCTTCAGCAACGTGATCGTCCATCAGAGGCTCTAAAGGTAAAGATCGCCGAGTTGGAGAGATTTAGGAAGAAGAAGAAAAGTGTCAAGCAGTTCCTTGTGGACGTTCCTGAATCAAAATCCTTTCTTGACACTGCTTCTATGCCCATGATTCTAACTGCGGTTGGAGTTGCTCTCTTTGCTAAACTCCTTATGATGTATGATGAGTCAAGATCTGAAGAGCTGATAGAACGCAAAATAAAGAATTCTCCGGCAGGTCAAGGAACTGTGAGGATGCTTAGTCGGGAGGAGTGGGAGGAAATGCGAGAGGTTCGACCAAGGACTCCGTTTGAATCCAAGCTTGCTCGTCCAAATGCAAGAATCAGAACTGGAGAACCTTTACACAGGATCTCCTACATGATATTTTATGTAGAGAACAATCAGGTCGCTATGAACCGGGATAGAGATAGTAGCTTACCTCTCTGCTCGGTGCTTCCCATCCTCCTCTCTCTTTTCAGCTTTCTTATTACCTCACCATCAATGGCTTCTTTTTCAGCTTCTTCTCTCAGCTTCCACCTACCGCCGAATCCACATTCCAAGATTAACCAGGAAGACGGCGGCGCTGATAGGGACTCCATGCTTTGGGGCTCTGCCTCCAACCGCTCATCTTTGAAATCCTCCTTCATCTCTCCCCTACCTCAGATTCCCTCCACAAGGAAGCAAAAGTGTGCTGTTGCAGCTGCCCCCAAGTTCTCCCTGCGCGTCGCTTCCAAACAAGCCTATATCTGTCGTGATTGCGGGTACATTTACAACGATAGAACTCCTTTTGAGAAATTGCCTGATAACTATTTCTGTCCTGTCTGTGGTGCTCCTAAGCGACGATTTAGACCTTATGAGCAATCAGTGACTAAAAATGATAACGAATTTGATGCGAGGAAGGCAAGAAAGGCGCAGATTCAGAAAGATGAAGCTATTGGGAAGGTGCTGCCTATTGCCGCTGCAGTGGGAATCGTGGCACTTGTAGGTGCAGAACCAGGAAGTGTGCTTCCCAGGATGGTTAGCAAGGCATCTGAGAAATGA

Protein sequence

MTGFGYGLRVLRRQMHLLQQRDRPSEALKVKIAELERFRKKKKSVKQFLVDVPESKSFLDTASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPAGQGTVRMLSREEWEEMREVRPRTPFESKLARPNARIRTGEPLHRISYMIFYVENNQVAMNRDRDSSLPLCSVLPILLSLFSFLITSPSMASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRKQKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVGAEPGSVLPRMVSKASEK

Homology

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BLAST of CmaCh10G000230 vs. ExPASy Swiss-Prot
Match: P04170 (Rubredoxin-1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949 / MB) OX=525146 GN=rd1 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 9.8e-06
Identity = 21/43 (48.84%), Postives = 28/43 (65.12%), Query Frame = 0


Query: 268 QAYICRDCGYIY----NDRTPFEKLPDNYFCPVCGAPKRRFRP 307
           Q Y+C  CGY Y    +D  PF++LPD++ CPVCG  K +F P
Sbjct: 2   QKYVCNVCGYEYDPAEHDNVPFDQLPDDWCCPVCGVSKDQFSP 44

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BLAST of CmaCh10G000230 vs. ExPASy Swiss-Prot
Match: O26258 (Probable rubredoxin OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) OX=187420 GN=MTH_155 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.2e-05
Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = 0


Query: 264 VASKQAYICRDCGYIYNDR-----------TPFEKLPDNYFCPVCGAPKRRFRPYE 309
           V++ + Y CR CGYIY+             TPFE LP+ + CP CGA K+ F+P +
Sbjct: 8   VSAMKRYKCRVCGYIYDPEKGEPRTDTPPGTPFEDLPETWRCPSCGAKKKMFKPLD 63

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BLAST of CmaCh10G000230 vs. ExPASy Swiss-Prot
Match: P24297 (Rubredoxin OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) OX=186497 GN=rub PE=1 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 2.9e-05
Identity = 21/50 (42.00%), Postives = 30/50 (60.00%), Query Frame = 0


Query: 270 YICRDCGYIYND-----------RTPFEKLPDNYFCPVCGAPKRRFRPYE 309
           ++C+ CGYIY++            T FE+LPD++ CP+CGAPK  F   E
Sbjct: 4   WVCKICGYIYDEDAGDPDNGISPGTKFEELPDDWVCPICGAPKSEFEKLE 53

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BLAST of CmaCh10G000230 vs. ExPASy Swiss-Prot
Match: Q9AL94 (Rubredoxin OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=rd PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04
Identity = 21/51 (41.18%), Postives = 28/51 (54.90%), Query Frame = 0


Query: 270 YICRDCGYIY-----------NDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ 310
           Y+C  CGYIY           N  T FE +PD++ CP+CG  K +F P E+
Sbjct: 4   YVCVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFEPSEE 54

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BLAST of CmaCh10G000230 vs. ExPASy Swiss-Prot
Match: P73068 (Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rub PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.4e-04
Identity = 23/58 (39.66%), Postives = 31/58 (53.45%), Query Frame = 0


Query: 258 PKFSLRVASKQAYICRDCGYIY-----------NDRTPFEKLPDNYFCPVCGAPKRRF 305
           P+ +L   +   + CR CGY+Y           +  TPFE LP N+ CPVCGAP+  F
Sbjct: 6   PEKTLAELASPNHECRACGYVYIPSQGDQKTSVSPGTPFEALPLNWKCPVCGAPRNYF 63

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BLAST of CmaCh10G000230 vs. ExPASy TrEMBL
Match: A0A6J1E6B5 (uncharacterized protein LOC111429830 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111429830 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 3.2e-92
Identity = 180/185 (97.30%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 168 LPLCSVLPILLSLFSFLITSPSMASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSA 227
           LPLCSVLPILLS FSFLITSPSMASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSA
Sbjct: 22  LPLCSVLPILLSHFSFLITSPSMASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSA 81

Query: 228 SNRSSLKSSFISPLPQIPSTRKQKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEK 287
           SNRSSLKSSFISPL QIPSTRKQKCAVAAAPKFS+RVASKQAYICRDCGYIYNDRTPFEK
Sbjct: 82  SNRSSLKSSFISPLRQIPSTRKQKCAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK 141

Query: 288 LPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFDARKARKAQIQKDEAIGKVLPI-AAAVGI 347
           LPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFD RKARKAQIQKDEAIGKVLPI AAAVGI
Sbjct: 142 LPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAAVGI 201

Query: 348 VALVG 352
           VALVG
Sbjct: 202 VALVG 206

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BLAST of CmaCh10G000230 vs. ExPASy TrEMBL
Match: A0A6J1JG21 (uncharacterized protein LOC111484793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484793 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 8.5e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 190 MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRK 249
           MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRK
Sbjct: 1   MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRK 60

Query: 250 QKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ 309
           QKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ
Sbjct: 61  QKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ 120

Query: 310 SVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG 352
           SVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG
Sbjct: 121 SVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG 162

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BLAST of CmaCh10G000230 vs. ExPASy TrEMBL
Match: A0A6J1JDC8 (uncharacterized protein LOC111484793 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484793 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 3.0e-82
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 195 ASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRKQKCAV 254
           ASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRKQKCAV
Sbjct: 3   ASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRKQKCAV 62

Query: 255 AAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKN 314
           AAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKN
Sbjct: 63  AAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKN 122

Query: 315 DNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG 352
           DNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG
Sbjct: 123 DNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG 159

[Close]

BLAST of CmaCh10G000230 vs. ExPASy TrEMBL
Match: A0A6J1E1X1 (uncharacterized protein LOC111429830 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111429830 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 4.1e-79
Identity = 154/158 (97.47%), Postives = 155/158 (98.10%), Query Frame = 0


Query: 195 ASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRKQKCAV 254
           ASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPL QIPSTRKQKCAV
Sbjct: 48  ASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLRQIPSTRKQKCAV 107

Query: 255 AAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKN 314
           AAAPKFS+RVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKN
Sbjct: 108 AAAPKFSMRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKN 167

Query: 315 DNEFDARKARKAQIQKDEAIGKVLPI-AAAVGIVALVG 352
           DNEFD RKARKAQIQKDEAIGKVLPI AAAVGIVALVG
Sbjct: 168 DNEFDVRKARKAQIQKDEAIGKVLPIAAAAVGIVALVG 205

[Close]

BLAST of CmaCh10G000230 vs. ExPASy TrEMBL
Match: A0A6J1JI36 (uncharacterized protein LOC111484792 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484792 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 1.8e-71
Identity = 149/166 (89.76%), Postives = 153/166 (92.17%), Query Frame = 0


Query: 1   MTGFGYGLRVLRRQMHLLQQRDRPSEALKVKIAELERFRKKKKSVKQFLVDVPESKSFLD 60
           MTGFGYGLRVLRRQMHLLQQRDRPSEALKVKIAELERFRKKKKSVKQFLVDVPESKSFLD
Sbjct: 1   MTGFGYGLRVLRRQMHLLQQRDRPSEALKVKIAELERFRKKKKSVKQFLVDVPESKSFLD 60

Query: 61  TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPAGQGTVRMLSREEWEEMREV 120
           TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPAGQGTVRMLSREEWEEMREV
Sbjct: 61  TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPAGQGTVRMLSREEWEEMREV 120

Query: 121 RPRTPFESKLARPNARIRTGEPLHRISYMIFYVENNQVAMNRDRDS 167
           RPRTPFESKLARPNARIRTGEPLHR     + V+    A+ R  +S
Sbjct: 121 RPRTPFESKLARPNARIRTGEPLHREDLKDWTVDVLSNALTRAEES 166

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BLAST of CmaCh10G000230 vs. NCBI nr
Match: KAG6589344.1 (hypothetical protein SDJN03_14767, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 586.6 bits (1511), Expect = 1.4e-163
Identity = 315/372 (84.68%), Postives = 320/372 (86.02%), Query Frame = 0


Query: 1   MTGFGYGLRVLRRQMHLLQQRDRPSEALKVKIAELERFRKKKKSVKQFLVDVPESKSFLD 60
           MTGFGYGLRVLRRQMHLLQQR+ PSEALKVKIAELERFRKKKKSVKQF+VDVPESKSFLD
Sbjct: 1   MTGFGYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSVKQFIVDVPESKSFLD 60

Query: 61  TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPAGQGTVRMLSREEWEEMREV 120
           TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSP GQGTVRMLSREEWEEMREV
Sbjct: 61  TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMREV 120

Query: 121 RPRTPFESKLARPNARIRTGEPLHR---------------------ISYMIFYVENNQVA 180
           RPRTPFESKLARPNARIRTGEP+HR                     ISYMIFYVENNQVA
Sbjct: 121 RPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESISYMIFYVENNQVA 180

Query: 181 MNRDRDSSLPLCSVLPILLSLFSFLITSPSMASFSASSLSFHLPPNPHSKINQEDGGADR 240
           MNRDRDS                        +  SASSLS HLPPNPHSKINQEDGGADR
Sbjct: 181 MNRDRDSRW--------------------WKSLDSASSLSLHLPPNPHSKINQEDGGADR 240

Query: 241 DSMLWGSASNRSSLKSSFISPLPQIPSTRKQKCAVAAAPKFSLRVASKQAYICRDCGYIY 300
           DSMLWGSASNRSSLKSSFISPL QIPSTRKQKCAVAAAPKFS+RVASKQAYICRDCGYIY
Sbjct: 241 DSMLWGSASNRSSLKSSFISPLRQIPSTRKQKCAVAAAPKFSMRVASKQAYICRDCGYIY 300

Query: 301 NDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFDARKARKAQIQKDEAIGKVLP 352
           NDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFD RKARKAQIQKDEAIGKVLP
Sbjct: 301 NDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFDVRKARKAQIQKDEAIGKVLP 352

[Close]

BLAST of CmaCh10G000230 vs. NCBI nr
Match: KAG7023031.1 (rd1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 583.6 bits (1503), Expect = 1.2e-162
Identity = 314/372 (84.41%), Postives = 319/372 (85.75%), Query Frame = 0


Query: 1   MTGFGYGLRVLRRQMHLLQQRDRPSEALKVKIAELERFRKKKKSVKQFLVDVPESKSFLD 60
           MTGFGYGLRVLRRQMHLLQQR+ PSEALKVKIAELERFRKKKKSVKQF+VDVPESKSFLD
Sbjct: 1   MTGFGYGLRVLRRQMHLLQQRECPSEALKVKIAELERFRKKKKSVKQFIVDVPESKSFLD 60

Query: 61  TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPAGQGTVRMLSREEWEEMREV 120
           TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSP GQGTVRMLSREEWEEMREV
Sbjct: 61  TASMPMILTAVGVALFAKLLMMYDESRSEELIERKIKNSPPGQGTVRMLSREEWEEMREV 120

Query: 121 RPRTPFESKLARPNARIRTGEPLHR---------------------ISYMIFYVENNQVA 180
           RPRTPFESKLARPNARIRTGEP+HR                     ISYMIFYVENNQVA
Sbjct: 121 RPRTPFESKLARPNARIRTGEPVHREDLKDWTVDVLSNALTRAEESISYMIFYVENNQVA 180

Query: 181 MNRDRDSSLPLCSVLPILLSLFSFLITSPSMASFSASSLSFHLPPNPHSKINQEDGGADR 240
           MNRDRDS                        +  SASSLS HL PNPHSKINQEDGGADR
Sbjct: 181 MNRDRDSRW--------------------WKSLDSASSLSLHLSPNPHSKINQEDGGADR 240

Query: 241 DSMLWGSASNRSSLKSSFISPLPQIPSTRKQKCAVAAAPKFSLRVASKQAYICRDCGYIY 300
           DSMLWGSASNRSSLKSSFISPL QIPSTRKQKCAVAAAPKFS+RVASKQAYICRDCGYIY
Sbjct: 241 DSMLWGSASNRSSLKSSFISPLRQIPSTRKQKCAVAAAPKFSMRVASKQAYICRDCGYIY 300

Query: 301 NDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFDARKARKAQIQKDEAIGKVLP 352
           NDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFD RKARKAQIQKDEAIGKVLP
Sbjct: 301 NDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFDVRKARKAQIQKDEAIGKVLP 352

[Close]

BLAST of CmaCh10G000230 vs. NCBI nr
Match: XP_022921625.1 (uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata])

HSP 1 Score: 348.6 bits (893), Expect = 6.6e-92
Identity = 180/185 (97.30%), Postives = 181/185 (97.84%), Query Frame = 0


Query: 168 LPLCSVLPILLSLFSFLITSPSMASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSA 227
           LPLCSVLPILLS FSFLITSPSMASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSA
Sbjct: 22  LPLCSVLPILLSHFSFLITSPSMASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSA 81

Query: 228 SNRSSLKSSFISPLPQIPSTRKQKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEK 287
           SNRSSLKSSFISPL QIPSTRKQKCAVAAAPKFS+RVASKQAYICRDCGYIYNDRTPFEK
Sbjct: 82  SNRSSLKSSFISPLRQIPSTRKQKCAVAAAPKFSMRVASKQAYICRDCGYIYNDRTPFEK 141

Query: 288 LPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFDARKARKAQIQKDEAIGKVLPI-AAAVGI 347
           LPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFD RKARKAQIQKDEAIGKVLPI AAAVGI
Sbjct: 142 LPDNYFCPVCGAPKRRFRPYEQSVTKNDNEFDVRKARKAQIQKDEAIGKVLPIAAAAVGI 201

Query: 348 VALVG 352
           VALVG
Sbjct: 202 VALVG 206

[Close]

BLAST of CmaCh10G000230 vs. NCBI nr
Match: XP_022987160.1 (uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 323.9 bits (829), Expect = 1.7e-84
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0


Query: 190 MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRK 249
           MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRK
Sbjct: 1   MASFSASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRK 60

Query: 250 QKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ 309
           QKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ
Sbjct: 61  QKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQ 120

Query: 310 SVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG 352
           SVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG
Sbjct: 121 SVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG 162

[Close]

BLAST of CmaCh10G000230 vs. NCBI nr
Match: XP_022987161.1 (uncharacterized protein LOC111484793 isoform X2 [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 6.2e-82
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0


Query: 195 ASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRKQKCAV 254
           ASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRKQKCAV
Sbjct: 3   ASSLSFHLPPNPHSKINQEDGGADRDSMLWGSASNRSSLKSSFISPLPQIPSTRKQKCAV 62

Query: 255 AAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKN 314
           AAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKN
Sbjct: 63  AAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSVTKN 122

Query: 315 DNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG 352
           DNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG
Sbjct: 123 DNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVALVG 159

[Close]

BLAST of CmaCh10G000230 vs. TAIR 10
Match: AT2G04340.1 (unknown protein; Has 24 Blast hits to 24 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 179.1 bits (453), Expect = 6.5e-45
Identity = 92/158 (58.23%), Postives = 124/158 (78.48%), Query Frame = 0


Query: 10  VLRRQMHLLQQRDRPSEALKVKIAELERFRKKKKSVK-QFLVDVPESKSFLDTASMPMIL 69
           +LRR+ H     D P+E L+ KIA+L++ +K++  +K QFLV+VPES+S+LDTA+MPM L
Sbjct: 11  LLRRRFH-SPSNDAPTETLRKKIADLQKSKKRRNPIKNQFLVEVPESRSYLDTATMPMFL 70

Query: 70  TAVGVALFAKLLMMYDESRSEELIERKIKNSPAGQGTVRMLSREEWEEMREVRPRTPFES 129
             VG+ALFAK+LMM D+S+S+E+IERKIKN+P GQGTVRM+ REEW+E REVRPRTPFES
Sbjct: 71  AVVGIALFAKVLMMIDDSKSQEMIERKIKNAPQGQGTVRMIDREEWDEFREVRPRTPFES 130

Query: 130 KLARPNARIRTGEPLHRISYMIFYVENNQVAMNRDRDS 167
           KLARPNA+IRTGEP+ +     + ++    A+ R  +S
Sbjct: 131 KLARPNAQIRTGEPVRKDDLKNWTIDVLTNALERTEES 167

[Close]

BLAST of CmaCh10G000230 vs. TAIR 10
Match: AT5G51010.1 (Rubredoxin-like superfamily protein )

HSP 1 Score: 156.4 bits (394), Expect = 4.5e-38
Identity = 74/116 (63.79%), Postives = 92/116 (79.31%), Query Frame = 0


Query: 234 KSSFISPLPQIPSTRKQKCAVAAAPKFSLRVASKQAYICRDCGYIYNDRTPFEKLPDNYF 293
           +SSF+          K+  + ++AP+FS+RV+SKQAYICRDCGYIYNDRTPF+KLPDNYF
Sbjct: 28  RSSFLPYYSMRLLGNKKSLSKSSAPRFSMRVSSKQAYICRDCGYIYNDRTPFDKLPDNYF 87

Query: 294 CPVCGAPKRRFRPYEQSVTKNDNEFDARKARKAQIQKDEAIGKVLPIAAAVGIVAL 350
           CPVC APKRRFR Y   V+KN N+ D RKARKA++Q+DEA+GK LPI  AVG++AL
Sbjct: 88  CPVCAAPKRRFRAYMPDVSKNVNDKDVRKARKAELQRDEAVGKALPIGIAVGVLAL 143

[Close]

BLAST of CmaCh10G000230 vs. TAIR 10
Match: AT5G17170.1 (rubredoxin family protein )

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-07
Identity = 35/102 (34.31%), Postives = 49/102 (48.04%), Query Frame = 0


Query: 256 AAPKFSLRVASKQ----AYICRDCGYIYNDRTPFEKLPDNYFCPVCGAPKRRFRPYEQSV 315
           A P+F  ++   Q     +IC DCG+IY     F++ PD Y CP C APK+RF  Y+   
Sbjct: 179 APPRFGRKLTETQKARATHICLDCGFIYTLPKSFDEQPDTYVCPQCIAPKKRFAKYD--- 238

Query: 316 TKNDNEFDARKARKAQIQKDEAIGKVL-PIAAAVGIVALVGA 353
                           +   +AIG  L PI   VG++A +GA
Sbjct: 239 ----------------VNTGKAIGGGLPPIGVIVGLLAGLGA 261

The following BLAST results are available for this feature:

BLAST of CmaCh10G000230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04170	9.8e-06	48.84	Rubredoxin-1 OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949 / MB) ...	[more]
O26258	2.2e-05	41.07	Probable rubredoxin OS=Methanothermobacter thermautotrophicus (strain ATCC 29096...	[more]
P24297	2.9e-05	42.00	Rubredoxin OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1...	[more]
Q9AL94	2.4e-04	41.18	Rubredoxin OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /...	[more]
P73068	2.4e-04	39.66	Rubredoxin OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=rub PE=...	[more]

BLAST of CmaCh10G000230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E6B5	3.2e-92	97.30	uncharacterized protein LOC111429830 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JG21	8.5e-85	100.00	uncharacterized protein LOC111484793 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JDC8	3.0e-82	100.00	uncharacterized protein LOC111484793 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E1X1	4.1e-79	97.47	uncharacterized protein LOC111429830 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JI36	1.8e-71	89.76	uncharacterized protein LOC111484792 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmaCh10G000230 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589344.1	1.4e-163	84.68	hypothetical protein SDJN03_14767, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7023031.1	1.2e-162	84.41	rd1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022921625.1	6.6e-92	97.30	uncharacterized protein LOC111429830 isoform X1 [Cucurbita moschata]	[more]
XP_022987160.1	1.7e-84	100.00	uncharacterized protein LOC111484793 isoform X1 [Cucurbita maxima]	[more]
XP_022987161.1	6.2e-82	100.00	uncharacterized protein LOC111484793 isoform X2 [Cucurbita maxima]	[more]

BLAST of CmaCh10G000230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04340.1	6.5e-45	58.23	unknown protein; Has 24 Blast hits to 24 proteins in 10 species: Archae - 0; Bac...	[more]
AT5G51010.1	4.5e-38	63.79	Rubredoxin-like superfamily protein	[more]
AT5G17170.1	1.1e-07	34.31	rubredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024935	Rubredoxin domain	PFAM	PF00301	Rubredoxin	coord: 270..304 e-value: 2.5E-5 score: 24.2
IPR024935	Rubredoxin domain	CDD	cd00730	rubredoxin	coord: 270..307 e-value: 3.64815E-13 score: 61.553
None	No IPR available	GENE3D	2.20.28.10		coord: 268..307 e-value: 1.2E-13 score: 52.6
None	No IPR available	PANTHER	PTHR36008	OS09G0478400 PROTEIN	coord: 8..145
None	No IPR available	SUPERFAMILY	57802	Rubredoxin-like	coord: 267..312
IPR024934	Rubredoxin-like domain	PROSITE	PS50903	RUBREDOXIN_LIKE	coord: 267..307 score: 12.297005

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh10G000230.1	CmaCh10G000230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005506	iron ion binding