CmaCh09G012350 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G012350
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Transposable element protein
Location	Cma_Chr09: 8234423 .. 8236011 (+)
RNA-Seq Expression	CmaCh09G012350
Synteny	CmaCh09G012350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGACTTAGGCAATGCAAAGAAAATACTTGGAATGGAGATAGAGCGAGATCGAAAAAAAGGTATAGTCTGGTTGACTCAGTCTCAATATCTACGCAAGGTATTGTCAAGATTTAGTTTGAATGATTCAACCAAACCCGTTAGCACTCCACTTGCTCCTCATTTCAAGCTGAGTGCTTCCATGTGTCCAAGTTCTGACGATGACAAAAGGTATATGGAGAACATTCCTTATACAAATGCTGTTGGTGCGTTGATGTATGCTATGGTGTGTACTCGACTTGATCTTTCACACGCAGTAAGCATAGTGAGTCGTTATATGCATAATCCTGGTAAAGAGCATTGGCAGGCTGTAAAATGGATTCTTAGGTACATTCTTGGCACTATTGATGTTGGTATTAAGTTTCAAAAACAAGAAATGTTTAATCTTGACAATCGTGTAGCTGATTTTGTGGATTCTGATTATGCTGGTGATTTGGATAAGCGACGATCTACTACGGGATATTTATTTACTATGGCTGGTGGACCTATTTGTTGGCGTTCAACATTGCAGTCTACGGTTGCATTGTCTACCACTGAAGCAGAGTATATGGCAGTAACGGAAGCTTTTAAAGAAGCTATTTGGATGCATGGTTTGATCAATGACTTGGGTATTTTGCAGGGACATATAGATGTATTTTGTGATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGCTTTTAAAGAAGCTATTTGGATGCATGGTTTGATCAATGACTTGGGTATTTTGCAGGGACATATAGATGTATTTTGTGATAGGCAGAGCGCTATTTGCTTGTCAAAAAATCAAGTCCATCATGCTCGTACAAAACACATTGATGTCCGTTTTCACTTTATTCGAGAAATTATTAGCAAAGGGGATATTCGTTTACTAGAAATTGGAATTGCTGATAACCCTGCTGATATGTTGACAAAGGTGATCGCTCGTGAAAAGTTCTGCCATTGTTTGGATCTCATCAACGTCGCAAGGAAGGAGTAG

mRNA sequence

ATGAAAGACTTAGGCAATGCAAAGAAAATACTTGGAATGGAGATAGAGCGAGATCGAAAAAAAGGTATAGTCTGGTTGACTCAGTCTCAATATCTACGCAAGGTATTGTCAAGATTTAGTTTGAATGATTCAACCAAACCCGTTAGCACTCCACTTGCTCCTCATTTCAAGCTGAGTGCTTCCATGTGTCCAAGTTCTGACGATGACAAAAGGTATATGGAGAACATTCCTTATACAAATGCTGTTGGTGCGTTGATGTATGCTATGGTGTGTACTCGACTTGATCTTTCACACGCAGTAAGCATAGTGAGTCGTTATATGCATAATCCTGGTAAAGAGCATTGGCAGGCTGTAAAATGGATTCTTAGGTACATTCTTGGCACTATTGATGTTGGTATTAAGTTTCAAAAACAAGAAATGTTTAATCTTGACAATCGTGTAGCTGATTTTGTGGATTCTGATTATGCTGGTGATTTGGATAAGCGACGATCTACTACGGGATATTTATTTACTATGGCTGGTGGACCTATTTGTTGGCGTTCAACATTGCAGTCTACGGTTGCATTGTCTACCACTGAAGCAGAGTATATGGCAGTAACGGAAGCTTTTAAAGAAGCTATTTGGATGCATGGTTTGATCAATGACTTGGAAATTGGAATTGCTGATAACCCTGCTGATATGTTGACAAAGGTGATCGCTCGTGAAAAGTTCTGCCATTGTTTGGATCTCATCAACGTCGCAAGGAAGGAGTAG

Coding sequence (CDS)

ATGAAAGACTTAGGCAATGCAAAGAAAATACTTGGAATGGAGATAGAGCGAGATCGAAAAAAAGGTATAGTCTGGTTGACTCAGTCTCAATATCTACGCAAGGTATTGTCAAGATTTAGTTTGAATGATTCAACCAAACCCGTTAGCACTCCACTTGCTCCTCATTTCAAGCTGAGTGCTTCCATGTGTCCAAGTTCTGACGATGACAAAAGGTATATGGAGAACATTCCTTATACAAATGCTGTTGGTGCGTTGATGTATGCTATGGTGTGTACTCGACTTGATCTTTCACACGCAGTAAGCATAGTGAGTCGTTATATGCATAATCCTGGTAAAGAGCATTGGCAGGCTGTAAAATGGATTCTTAGGTACATTCTTGGCACTATTGATGTTGGTATTAAGTTTCAAAAACAAGAAATGTTTAATCTTGACAATCGTGTAGCTGATTTTGTGGATTCTGATTATGCTGGTGATTTGGATAAGCGACGATCTACTACGGGATATTTATTTACTATGGCTGGTGGACCTATTTGTTGGCGTTCAACATTGCAGTCTACGGTTGCATTGTCTACCACTGAAGCAGAGTATATGGCAGTAACGGAAGCTTTTAAAGAAGCTATTTGGATGCATGGTTTGATCAATGACTTGGAAATTGGAATTGCTGATAACCCTGCTGATATGTTGACAAAGGTGATCGCTCGTGAAAAGTTCTGCCATTGTTTGGATCTCATCAACGTCGCAAGGAAGGAGTAG

Protein sequence

MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSASMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWRSTLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLEIGIADNPADMLTKVIAREKFCHCLDLINVARKE

Homology

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BLAST of CmaCh09G012350 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.1e-64
Identity = 132/297 (44.44%), Postives = 179/297 (60.27%), Query Frame = 0


Query: 1    MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
            MKDLG A++ILGM+I R+R    +WL+Q +Y+ +VL RF++ ++ KPVSTPLA H KLS 
Sbjct: 1035 MKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNA-KPVSTPLAGHLKLSK 1094

Query: 61   SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
             MCP++ ++K  M  +PY++AVG+LMYAMVCTR D++HAV +VSR++ NPGKEHW+AVKW
Sbjct: 1095 KMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKW 1154

Query: 121  ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
            ILRY+ GT    + F        D  +  + D+D AGD+D R+S+TGYLFT +GG I W+
Sbjct: 1155 ILRYLRGTTGDCLCFG-----GSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQ 1214

Query: 181  STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLIND------------------------- 240
            S LQ  VALSTTEAEY+A TE  KE IW+   + +                         
Sbjct: 1215 SKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSM 1274

Query: 241  --------------------------LEIGIADNPADMLTKVIAREKFCHCLDLINV 247
                                      L+I   +NPADMLTKV+ R KF  C +L+ +
Sbjct: 1275 YHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325

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BLAST of CmaCh09G012350 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 164.5 bits (415), Expect = 1.6e-39
Identity = 95/225 (42.22%), Postives = 142/225 (63.11%), Query Frame = 0


Query: 1    MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
            M DL   K  +G+ IE    K  ++L+QS Y++K+LS+F++ ++   VSTPL    K++ 
Sbjct: 1114 MTDLNEIKHFIGIRIEMQEDK--IYLSQSAYVKKILSKFNM-ENCNAVSTPLPS--KINY 1173

Query: 61   SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
             +  S +D      N P  + +G LMY M+CTR DL+ AV+I+SRY      E WQ +K 
Sbjct: 1174 ELLNSDEDC-----NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKR 1233

Query: 121  ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAG-GPICW 180
            +LRY+ GTID+ + F+K   F  +N++  +VDSD+AG    R+STTGYLF M     ICW
Sbjct: 1234 VLRYLKGTIDMKLIFKKNLAF--ENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICW 1293

Query: 181  RSTLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLEIGIADNP 225
             +  Q++VA S+TEAEYMA+ EA +EA+W+  L+  + I + +NP
Sbjct: 1294 NTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKL-ENP 1325

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BLAST of CmaCh09G012350 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 4.2e-32
Identity = 67/137 (48.91%), Postives = 97/137 (70.80%), Query Frame = 0


Query: 73  MENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKWILRYILGTIDVG 132
           M+N+PY +AVGA+MY MV TR DL+ AV ++S++  +P   HWQA+K +LRY+  T   G
Sbjct: 1   MKNVPYLSAVGAIMYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYG 60

Query: 133 IKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWRSTLQSTVALSTT 192
           ++F +     L      + D+D+AGD++ RRST+GYLF + GG + WRS  Q TVALS+T
Sbjct: 61  LEFTRAGTAKL----VGYSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSST 120

Query: 193 EAEYMAVTEAFKEAIWM 210
           E EYMA++EA +EA+W+
Sbjct: 121 EDEYMALSEATQEAVWL 133

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BLAST of CmaCh09G012350 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.8e-26
Identity = 77/210 (36.67%), Postives = 112/210 (53.33%), Query Frame = 0


Query: 15   IERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSASMCPSSDDDKRYME 74
            IE  R    + L+Q +Y   +L+R ++  + KPV+TP+A   KL+        D      
Sbjct: 1172 IEAKRVPQGLHLSQRRYTLDLLARTNML-TAKPVATPMATSPKLTLHSGTKLPDPTE--- 1231

Query: 75   NIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKWILRYILGTIDVGIK 134
               Y   VG+L Y +  TR DLS+AV+ +S+YMH P  +HW A+K +LRY+ GT D GI 
Sbjct: 1232 ---YRGIVGSLQY-LAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIF 1291

Query: 135  FQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWRSTLQSTVALSTTEA 194
             +K    +L      + D+D+AGD D   ST GY+  +   PI W S  Q  V  S+TEA
Sbjct: 1292 LKKGNTLSLH----AYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEA 1351

Query: 195  EYMAVTEAFKEAIWMHGLINDLEIGIADNP 225
            EY +V     E  W+  L+ +L I ++  P
Sbjct: 1352 EYRSVANTSSELQWICSLLTELGIQLSHPP 1369

[Close]

BLAST of CmaCh09G012350 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.9e-26
Identity = 77/210 (36.67%), Postives = 115/210 (54.76%), Query Frame = 0


Query: 15   IERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSASMCPSSDDDKRYME 74
            IE  R    + L+Q +Y+  +L+R ++  + KPV+TP+AP  KLS           +  +
Sbjct: 1189 IEAKRVPTGLHLSQRRYILDLLARTNM-ITAKPVTTPMAPSPKLSLY------SGTKLTD 1248

Query: 75   NIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKWILRYILGTIDVGIK 134
               Y   VG+L Y +  TR D+S+AV+ +S++MH P +EH QA+K ILRY+ GT + GI 
Sbjct: 1249 PTEYRGIVGSLQY-LAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIF 1308

Query: 135  FQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWRSTLQSTVALSTTEA 194
             +K    +L      + D+D+AGD D   ST GY+  +   PI W S  Q  V  S+TEA
Sbjct: 1309 LKKGNTLSLH----AYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEA 1368

Query: 195  EYMAVTEAFKEAIWMHGLINDLEIGIADNP 225
            EY +V     E  W+  L+ +L I +   P
Sbjct: 1369 EYRSVANTSSEMQWICSLLTELGIRLTRPP 1386

[Close]

BLAST of CmaCh09G012350 vs. ExPASy TrEMBL
Match: A0A2R6QHR4 (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18495 PE=4 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 3.7e-100
Identity = 190/300 (63.33%), Postives = 218/300 (72.67%), Query Frame = 0


Query: 1    MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
            MKDLG AKKILGMEI+RDR KG VWLTQSQYL+KVL RF ++ STKPVSTPLA HF+LSA
Sbjct: 982  MKDLGEAKKILGMEIKRDRVKGTVWLTQSQYLKKVLQRFGIDSSTKPVSTPLASHFRLSA 1041

Query: 61   SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
            SM P ++D++++MENIPY NAVGALMYAMVCTR D+SHAVS+VSRYMHNPGK HWQAVKW
Sbjct: 1042 SMSPHTEDERKHMENIPYANAVGALMYAMVCTRPDISHAVSMVSRYMHNPGKVHWQAVKW 1101

Query: 121  ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
            ILRYI GT++VG+KFQ+ +          +VDSDYAGDLDKRRSTTGY+FTMAGGP+CWR
Sbjct: 1102 ILRYIHGTVNVGLKFQRDD--KSSQYSVGYVDSDYAGDLDKRRSTTGYVFTMAGGPVCWR 1161

Query: 181  STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDL------------------------ 240
            STLQSTVALSTTEAEYMAVTEAFKEAIW+HGLINDL                        
Sbjct: 1162 STLQSTVALSTTEAEYMAVTEAFKEAIWLHGLINDLGIDQEHVDVYCDSQSAICLAKNQV 1221

Query: 241  ---------------------------EIGIADNPADMLTKVIAREKFCHCLDLINVARK 250
                                       +I   DNPADMLTKV++  KF HCLDLIN++ +
Sbjct: 1222 HHSRTKHIDVRFHFIREILNEGDVLLEKISTKDNPADMLTKVVSGIKFKHCLDLINISEQ 1279

[Close]

BLAST of CmaCh09G012350 vs. ExPASy TrEMBL
Match: A0A2R6RIX9 (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc05285 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 6.3e-100
Identity = 187/300 (62.33%), Postives = 219/300 (73.00%), Query Frame = 0


Query: 1   MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
           MKDLG AKKILGMEI+RDR KG VWLTQSQYL+K+L RF ++ STKPVSTPLA HF+LSA
Sbjct: 304 MKDLGEAKKILGMEIKRDRVKGTVWLTQSQYLKKILQRFRIDSSTKPVSTPLASHFRLSA 363

Query: 61  SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
           SM P +DD++++M N+PY NAVGALMYAMVCTR D+SHAVS+VSRYMH+PGKEHW AVKW
Sbjct: 364 SMSPRTDDERKHMANVPYANAVGALMYAMVCTRPDISHAVSMVSRYMHDPGKEHWMAVKW 423

Query: 121 ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
           ILRYI GTIDVG+K+Q+++   + +    +VDSDYAGDLDKRRSTTGY+FTMAGGP+CWR
Sbjct: 424 ILRYIQGTIDVGLKYQRED--KVGHLSVGYVDSDYAGDLDKRRSTTGYVFTMAGGPVCWR 483

Query: 181 STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDL------------------------ 240
           STLQSTVALSTTEAEYMAVTEAFKEAIW+HGLINDL                        
Sbjct: 484 STLQSTVALSTTEAEYMAVTEAFKEAIWLHGLINDLGIDQEHVDVYCDSQSAICLAKNQV 543

Query: 241 ---------------------------EIGIADNPADMLTKVIAREKFCHCLDLINVARK 250
                                      +I   DNPADMLT V++  KF HCLDLIN++ +
Sbjct: 544 HHFRTKHIDVQFHFIREILNEGDVLLEKISTKDNPADMLTNVVSEIKFKHCLDLINISEQ 601

[Close]

BLAST of CmaCh09G012350 vs. ExPASy TrEMBL
Match: A0A2R6RYD4 (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02232 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.4e-94
Identity = 171/218 (78.44%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 1    MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
            MKDLG AKKILGMEI+RDR KG VWLTQSQYL+KVL RF ++ STKPVSTPLA HF+LSA
Sbjct: 1032 MKDLGEAKKILGMEIKRDRVKGTVWLTQSQYLKKVLQRFGIDSSTKPVSTPLASHFRLSA 1091

Query: 61   SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
            SM P ++D++++MENIPY NAVGALMYAMVCTR D+SHAVS+VSRYMHNPGK HWQAVKW
Sbjct: 1092 SMSPHTEDERKHMENIPYANAVGALMYAMVCTRPDISHAVSMVSRYMHNPGKVHWQAVKW 1151

Query: 121  ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
            ILRYI GT++VG+KFQ+ +          +VDSDYAGDLDKRRSTTGY+FTMAGGP+CWR
Sbjct: 1152 ILRYIHGTVNVGLKFQRDD--KSSQYSVGYVDSDYAGDLDKRRSTTGYVFTMAGGPVCWR 1211

Query: 181  STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLEI 219
            STLQSTVALSTTEAEYMAVTEAFKEAIW+HGLINDL I
Sbjct: 1212 STLQSTVALSTTEAEYMAVTEAFKEAIWLHGLINDLGI 1247

[Close]

BLAST of CmaCh09G012350 vs. ExPASy TrEMBL
Match: A0A5B7BYT4 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Davidia involucrata OX=16924 GN=Din_043520 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.4e-93
Identity = 181/297 (60.94%), Postives = 210/297 (70.71%), Query Frame = 0


Query: 1   MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
           MKDLG AKKILGMEI+RDR KG V+LTQ+QYL+ VL RF ++ + K V+TPLA HFKLSA
Sbjct: 207 MKDLGEAKKILGMEIKRDRVKGTVFLTQTQYLKNVLQRFGMDGTAKSVNTPLAAHFKLSA 266

Query: 61  SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
            M P +++++++M  IPY NAVGALMYAMVCTR D+SHAVS+VSRYMHNPGK HWQAVKW
Sbjct: 267 LMSPRTEEERKHMTQIPYANAVGALMYAMVCTRPDISHAVSMVSRYMHNPGKGHWQAVKW 326

Query: 121 ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
           ILRYI GT+DVG+KFQK +  +    V  +VDSDYAGDLDKRRSTTGY+FT+AGGP+ WR
Sbjct: 327 ILRYIQGTVDVGLKFQKDD--STGQHVIGYVDSDYAGDLDKRRSTTGYVFTLAGGPVSWR 386

Query: 181 STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDL------------------------ 240
           STLQSTVALSTTEAEYMAVTEAFKEAIW+ GLI DL                        
Sbjct: 387 STLQSTVALSTTEAEYMAVTEAFKEAIWLQGLIEDLGIVQEHIEVYCASQSAICLAKNQV 446

Query: 241 ---------------------------EIGIADNPADMLTKVIAREKFCHCLDLINV 247
                                      +IG ADNPADMLTKV+   KF HCLDLIN+
Sbjct: 447 HHARTKHIDVRFHFILEIVDEGDILLQKIGTADNPADMLTKVVTGIKFKHCLDLINI 501

[Close]

BLAST of CmaCh09G012350 vs. ExPASy TrEMBL
Match: A0A4Y1QXX8 (Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_005583 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.6e-90
Identity = 178/299 (59.53%), Postives = 206/299 (68.90%), Query Frame = 0


Query: 1   MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
           MKDLG A+KILGMEIERDR KG + L Q QYL+KVL RF +N+++KPVSTPLAPHFKLSA
Sbjct: 513 MKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVLQRFGMNENSKPVSTPLAPHFKLSA 572

Query: 61  SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
           SM P + ++  YM  IPY +AVG+LMYAMVCTR D+S AVSIVSRYMHNPGK HWQAVKW
Sbjct: 573 SMSPKTGEESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKW 632

Query: 121 ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
           ILRYILGT+DVG+ FQ  ++      V  +VDSDYAGDLDKRRSTTG++FT+AGGP+ WR
Sbjct: 633 ILRYILGTVDVGLLFQHDKV--TGQCVVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWR 692

Query: 181 STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDL------------------------ 240
           S LQSTVALSTTEAEYMAVTEA KEAIW+ GL+ DL                        
Sbjct: 693 SILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLGDLGVQQDHVDVHCDSQSAIYLAKNQV 752

Query: 241 ---------------------------EIGIADNPADMLTKVIAREKFCHCLDLINVAR 249
                                      +IG ADNPADMLTK I+  KF HCLDLI + +
Sbjct: 753 HHARTKHIDVRFHFVREIIEEGDILLQKIGTADNPADMLTKPISLLKFKHCLDLIGICK 809

[Close]

BLAST of CmaCh09G012350 vs. NCBI nr
Match: PSS08126.1 (Endonuclease [Actinidia chinensis var. chinensis])

HSP 1 Score: 374.4 bits (960), Expect = 7.7e-100
Identity = 190/300 (63.33%), Postives = 218/300 (72.67%), Query Frame = 0


Query: 1    MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
            MKDLG AKKILGMEI+RDR KG VWLTQSQYL+KVL RF ++ STKPVSTPLA HF+LSA
Sbjct: 982  MKDLGEAKKILGMEIKRDRVKGTVWLTQSQYLKKVLQRFGIDSSTKPVSTPLASHFRLSA 1041

Query: 61   SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
            SM P ++D++++MENIPY NAVGALMYAMVCTR D+SHAVS+VSRYMHNPGK HWQAVKW
Sbjct: 1042 SMSPHTEDERKHMENIPYANAVGALMYAMVCTRPDISHAVSMVSRYMHNPGKVHWQAVKW 1101

Query: 121  ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
            ILRYI GT++VG+KFQ+ +          +VDSDYAGDLDKRRSTTGY+FTMAGGP+CWR
Sbjct: 1102 ILRYIHGTVNVGLKFQRDD--KSSQYSVGYVDSDYAGDLDKRRSTTGYVFTMAGGPVCWR 1161

Query: 181  STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDL------------------------ 240
            STLQSTVALSTTEAEYMAVTEAFKEAIW+HGLINDL                        
Sbjct: 1162 STLQSTVALSTTEAEYMAVTEAFKEAIWLHGLINDLGIDQEHVDVYCDSQSAICLAKNQV 1221

Query: 241  ---------------------------EIGIADNPADMLTKVIAREKFCHCLDLINVARK 250
                                       +I   DNPADMLTKV++  KF HCLDLIN++ +
Sbjct: 1222 HHSRTKHIDVRFHFIREILNEGDVLLEKISTKDNPADMLTKVVSGIKFKHCLDLINISEQ 1279

[Close]

BLAST of CmaCh09G012350 vs. NCBI nr
Match: PSS29970.1 (Endonuclease [Actinidia chinensis var. chinensis])

HSP 1 Score: 373.6 bits (958), Expect = 1.3e-99
Identity = 187/300 (62.33%), Postives = 219/300 (73.00%), Query Frame = 0


Query: 1   MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
           MKDLG AKKILGMEI+RDR KG VWLTQSQYL+K+L RF ++ STKPVSTPLA HF+LSA
Sbjct: 304 MKDLGEAKKILGMEIKRDRVKGTVWLTQSQYLKKILQRFRIDSSTKPVSTPLASHFRLSA 363

Query: 61  SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
           SM P +DD++++M N+PY NAVGALMYAMVCTR D+SHAVS+VSRYMH+PGKEHW AVKW
Sbjct: 364 SMSPRTDDERKHMANVPYANAVGALMYAMVCTRPDISHAVSMVSRYMHDPGKEHWMAVKW 423

Query: 121 ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
           ILRYI GTIDVG+K+Q+++   + +    +VDSDYAGDLDKRRSTTGY+FTMAGGP+CWR
Sbjct: 424 ILRYIQGTIDVGLKYQRED--KVGHLSVGYVDSDYAGDLDKRRSTTGYVFTMAGGPVCWR 483

Query: 181 STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDL------------------------ 240
           STLQSTVALSTTEAEYMAVTEAFKEAIW+HGLINDL                        
Sbjct: 484 STLQSTVALSTTEAEYMAVTEAFKEAIWLHGLINDLGIDQEHVDVYCDSQSAICLAKNQV 543

Query: 241 ---------------------------EIGIADNPADMLTKVIAREKFCHCLDLINVARK 250
                                      +I   DNPADMLT V++  KF HCLDLIN++ +
Sbjct: 544 HHFRTKHIDVQFHFIREILNEGDVLLEKISTKDNPADMLTNVVSEIKFKHCLDLINISEQ 601

[Close]

BLAST of CmaCh09G012350 vs. NCBI nr
Match: PSS35035.1 (Endonuclease [Actinidia chinensis var. chinensis])

HSP 1 Score: 355.9 bits (912), Expect = 2.8e-94
Identity = 171/218 (78.44%), Postives = 193/218 (88.53%), Query Frame = 0


Query: 1    MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
            MKDLG AKKILGMEI+RDR KG VWLTQSQYL+KVL RF ++ STKPVSTPLA HF+LSA
Sbjct: 1032 MKDLGEAKKILGMEIKRDRVKGTVWLTQSQYLKKVLQRFGIDSSTKPVSTPLASHFRLSA 1091

Query: 61   SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
            SM P ++D++++MENIPY NAVGALMYAMVCTR D+SHAVS+VSRYMHNPGK HWQAVKW
Sbjct: 1092 SMSPHTEDERKHMENIPYANAVGALMYAMVCTRPDISHAVSMVSRYMHNPGKVHWQAVKW 1151

Query: 121  ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
            ILRYI GT++VG+KFQ+ +          +VDSDYAGDLDKRRSTTGY+FTMAGGP+CWR
Sbjct: 1152 ILRYIHGTVNVGLKFQRDD--KSSQYSVGYVDSDYAGDLDKRRSTTGYVFTMAGGPVCWR 1211

Query: 181  STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLEI 219
            STLQSTVALSTTEAEYMAVTEAFKEAIW+HGLINDL I
Sbjct: 1212 STLQSTVALSTTEAEYMAVTEAFKEAIWLHGLINDLGI 1247

[Close]

BLAST of CmaCh09G012350 vs. NCBI nr
Match: XP_042009286.1 (secreted RxLR effector protein 161-like [Salvia splendens])

HSP 1 Score: 343.6 bits (880), Expect = 1.4e-90
Identity = 164/255 (64.31%), Postives = 200/255 (78.43%), Query Frame = 0


Query: 1   MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
           MKDLG AKKILGMEI  DR+   +WLTQ QYL KVL RF +ND++KPVSTPLAPH KLS+
Sbjct: 1   MKDLGKAKKILGMEITMDREGDKLWLTQKQYLTKVLQRFGINDNSKPVSTPLAPHLKLSS 60

Query: 61  SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
            + P ++D++ YM  +PY NAVG+LMYAMVCTR D+S AV IVSRYMH+PG  HWQAVKW
Sbjct: 61  QLSPKTEDEREYMAKVPYANAVGSLMYAMVCTRPDISQAVGIVSRYMHDPGNGHWQAVKW 120

Query: 121 ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
           ILRYI  T+D+G+ F++ +  +L +    + DSDYAGDLDKRRSTTGYLFT+A  P+ W+
Sbjct: 121 ILRYIKDTVDIGLLFEQDK--SLGHFAVGYCDSDYAGDLDKRRSTTGYLFTLANAPVSWK 180

Query: 181 STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLE-------IGIADNPADMLTKVIA 240
           STLQSTVALSTTEAEYMA+TEA KEAIW+HGL+ +LE       +   +N ADMLTKV+ 
Sbjct: 181 STLQSTVALSTTEAEYMAITEAVKEAIWLHGLLKELEEEIVIRKVPTLENLADMLTKVVT 240

Query: 241 REKFCHCLDLINVAR 249
           R KF HCLDL+N+ R
Sbjct: 241 RAKFEHCLDLVNILR 253

[Close]

BLAST of CmaCh09G012350 vs. NCBI nr
Match: BBH09562.1 (transposable element gene [Prunus dulcis])

HSP 1 Score: 342.4 bits (877), Expect = 3.2e-90
Identity = 178/299 (59.53%), Postives = 206/299 (68.90%), Query Frame = 0


Query: 1    MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
            MKDLG A+KILGMEIERDR KG + L Q QYL+KVL RF +N+++KPVSTPLAPHFKLSA
Sbjct: 1047 MKDLGEARKILGMEIERDRAKGKISLCQKQYLKKVLQRFGMNENSKPVSTPLAPHFKLSA 1106

Query: 61   SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
            SM P + ++  YM  IPY +AVG+LMYAMVCTR D+S AVSIVSRYMHNPGK HWQAVKW
Sbjct: 1107 SMSPKTGEESHYMAQIPYASAVGSLMYAMVCTRPDISQAVSIVSRYMHNPGKGHWQAVKW 1166

Query: 121  ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
            ILRYILGT+DVG+ FQ  ++      V  +VDSDYAGDLDKRRSTTG++FT+AGGP+ WR
Sbjct: 1167 ILRYILGTVDVGLLFQHDKV--TGQCVVGYVDSDYAGDLDKRRSTTGFVFTIAGGPVSWR 1226

Query: 181  STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDL------------------------ 240
            S LQSTVALSTTEAEYMAVTEA KEAIW+ GL+ DL                        
Sbjct: 1227 SILQSTVALSTTEAEYMAVTEAIKEAIWLQGLLGDLGVQQDHVDVHCDSQSAIYLAKNQV 1286

Query: 241  ---------------------------EIGIADNPADMLTKVIAREKFCHCLDLINVAR 249
                                       +IG ADNPADMLTK I+  KF HCLDLI + +
Sbjct: 1287 HHARTKHIDVRFHFVREIIEEGDILLQKIGTADNPADMLTKPISLLKFKHCLDLIGICK 1343

[Close]

BLAST of CmaCh09G012350 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 111.7 bits (278), Expect = 8.6e-25
Identity = 76/208 (36.54%), Postives = 114/208 (54.81%), Query Frame = 0


Query: 1   MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
           MKDLG     LG++I +    G+ +L+Q++Y  ++L+   + D  KP+STPL    KL++
Sbjct: 33  MKDLGPVHYFLGIQI-KTHPSGL-FLSQTKYAEQILNNAGMLD-CKPMSTPLP--LKLNS 92

Query: 61  SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
           S+  +     +Y +   + + VGAL Y +  TR D+S+AV+IV + MH P    +  +K 
Sbjct: 93  SVSTA-----KYPDPSDFRSIVGALQY-LTLTRPDISYAVNIVCQRMHEPTLADFDLLKR 152

Query: 121 ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
           +LRY+ GTI  G+   K    N    V  F DSD+AG    RRSTTG+   +    I W 
Sbjct: 153 VLRYVKGTIFHGLYIHKNSKLN----VQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWS 212

Query: 181 STLQSTVALSTTEAEYMAVTEAFKEAIW 209
           +  Q TV+ S+TE EY A+     E  W
Sbjct: 213 AKRQPTVSRSSTETEYRALALTAAELTW 225

[Close]

BLAST of CmaCh09G012350 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-22
Identity = 73/221 (33.03%), Postives = 109/221 (49.32%), Query Frame = 0


Query: 1   MKDLGNAKKILGMEIERDRKKGIVWLTQSQYLRKVLSRFSLNDSTKPVSTPLAPHFKLSA 60
           ++DLG  K  LG+EI R      + + Q +Y   +L    L    KP S P+ P    SA
Sbjct: 310 LRDLGPLKYFLGLEIARSAAG--INICQRKYALDLLDETGLL-GCKPSSVPMDPSVTFSA 369

Query: 61  SMCPSSDDDKRYMENIPYTNAVGALMYAMVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKW 120
               S  D   +++   Y   +G LMY  + TRLD+S AV+ +S++   P   H QAV  
Sbjct: 370 H---SGGD---FVDAKAYRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMK 429

Query: 121 ILRYILGTIDVGIKFQKQEMFNLDNRVADFVDSDYAGDLDKRRSTTGYLFTMAGGPICWR 180
           IL YI GT+  G+ +  Q    L      F D+ +    D RRST GY   +    I W+
Sbjct: 430 ILHYIKGTVGQGLFYSSQAEMQLQ----VFSDASFQSCKDTRRSTNGYCMFLGTSLISWK 489

Query: 181 STLQSTVALSTTEAEYMAVTEAFKEAIWMHGLINDLEIGIA 222
           S  Q  V+ S+ EAEY A++ A  E +W+     +L++ ++
Sbjct: 490 SKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLS 516

[Close]

BLAST of CmaCh09G012350 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 47.0 bits (110), Expect = 2.6e-05
Identity = 27/80 (33.75%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 89  MVCTRLDLSHAVSIVSRYMHNPGKEHWQAVKWILRYILGTIDVGIKFQKQEMFNLDNRVA 148
           +  TR DL+ AV+ +S++         QAV  +L Y+ GT+  G+ +        D ++ 
Sbjct: 3   LTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATS----DLQLK 62

Query: 149 DFVDSDYAGDLDKRRSTTGY 169
            F DSD+A   D RRS TG+
Sbjct: 63  AFADSDWASCPDTRRSVTGF 78

The following BLAST results are available for this feature:

BLAST of CmaCh09G012350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.1e-64	44.44	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.6e-39	42.22	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P0CV72	4.2e-32	48.91	Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P...	[more]
Q9ZT94	5.8e-26	36.67	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	9.9e-26	36.67	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]

BLAST of CmaCh09G012350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2R6QHR4	3.7e-100	63.33	Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18495 ...	[more]
A0A2R6RIX9	6.3e-100	62.33	Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc05285 ...	[more]
A0A2R6RYD4	1.4e-94	78.44	Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02232 ...	[more]
A0A5B7BYT4	3.4e-93	60.94	Reverse transcriptase Ty1/copia-type domain-containing protein OS=Davidia involu...	[more]
A0A4Y1QXX8	1.6e-90	59.53	Transposable element protein OS=Prunus dulcis OX=3755 GN=Prudu_005583 PE=4 SV=1	[more]

BLAST of CmaCh09G012350 vs. NCBI nr


Match Name	E-value	Identity	Description
PSS08126.1	7.7e-100	63.33	Endonuclease [Actinidia chinensis var. chinensis]	[more]
PSS29970.1	1.3e-99	62.33	Endonuclease [Actinidia chinensis var. chinensis]	[more]
PSS35035.1	2.8e-94	78.44	Endonuclease [Actinidia chinensis var. chinensis]	[more]
XP_042009286.1	1.4e-90	64.31	secreted RxLR effector protein 161-like [Salvia splendens]	[more]
BBH09562.1	3.2e-90	59.53	transposable element gene [Prunus dulcis]	[more]

BLAST of CmaCh09G012350 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00810.1	8.6e-25	36.54	DNA/RNA polymerases superfamily protein	[more]
AT4G23160.1	3.1e-22	33.03	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00240.1	2.6e-05	33.75	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF334	SUBFAMILY NOT NAMED	coord: 34..217
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 34..217
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 150..218 e-value: 4.04595E-37 score: 125.658

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G012350.1	CmaCh09G012350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding