CmaCh09G012120 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G012120
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description1-acyl-sn-glycerol-3-phosphate acyltransferase
LocationCma_Chr09: 8030983 .. 8031830 (-)
RNA-Seq ExpressionCmaCh09G012120
SyntenyCmaCh09G012120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACGAATATTGCCCACTCCTTGTGATTTCTTCTGCAAGAAGAAGAAGAAGAGCTTTTGCCCTACCCTTGTCTCTTCACTTTCTGTATCGTCCGCCATTTCTGGGTTCTCTATTCTCTCGGTTCTGCTAATCACTTCAATTCATCAACAACTCTACCTTGCAAAGTCCTGTTGAATATTCCGTCCAACATCATGGTTTTCTACCTTTTGTTCTGATTCATCTGATTGAACCAATATCATCTCATCCCAAGTTTGTTTCTGGGCTTAAATTGTCGATGTTTGTATGCAAGCGTGTTCGACTTAGCTATGGTGATTGGAGTTCTTGTCTTCGTCACATGATTTTAGAATCATTGGGTTGTTTATCATTTTTTTCTTTTTTTTAATTCTCAGCCTAAGCTTAGACGCAATTTCTCATGAAATAGAGCGGCTCTGTTTTGTGAAACCCTTCTTCTGCTCAAGCTTTGCTCGTGTTTTGTCCATGGAAGCCGTTTCTCTCTCTCGCCACGGGGCTTCGCTCCCTCTTCATGGCTATGGTGGTTTAGAGATTTTTTTCCTTTATTTTTTTTTTCTTATGGGTTCACAATTTTATTTGTTTCTAATCGATGCAATGCAATTCTGTTGGATCAAATGTTTAGGTTACCAAGAGCTTGGGTTTTCCAGTGCTTCATCTTCTCTGCCAGTAAGCATTTTAGTAAATCTATTTATCACTTTTGTTTCATTGTACTGGTTTGTTCTATATATTTGTTGGAAGGTTTAAACCCTGCACTCTGTTTTGCTGTATTCTTGTAGCTGTTCTCTCGAATGCTTATTGTAGCTAACCTAGTGCGAGATGAACTCTGGTGGTGCTAG

mRNA sequence

ATACGAATATTGCCCACTCCTTGTGATTTCTTCTGCAAGAAGAAGAAGAAGAGCTTTTGCCCTACCCTTGTCTCTTCACTTTCTGTATCGTCCGCCATTTCTGGGTTCTCTATTCTCTCGGTTCTGCTAATCACTTCAATTCATCAACAACTCTACCTTGCAAACCTAAGCTTAGACGCAATTTCTCATGAAATAGAGCGGCTCTGTTTTGTGAAACCCTTCTTCTGCTCAAGCTTTGCTCGTGTTTTGTCCATGGAAGCCGTTTCTCTCTCTCGCCACGGGGCTTCGCTCCCTCTTCATGGCTATGGTGGTTACCAAGAGCTTGGGTTTTCCAGTGCTTCATCTTCTCTGCCACTGTTCTCTCGAATGCTTATTGTAGCTAACCTAGTGCGAGATGAACTCTGGTGGTGCTAG

Coding sequence (CDS)

ATACGAATATTGCCCACTCCTTGTGATTTCTTCTGCAAGAAGAAGAAGAAGAGCTTTTGCCCTACCCTTGTCTCTTCACTTTCTGTATCGTCCGCCATTTCTGGGTTCTCTATTCTCTCGGTTCTGCTAATCACTTCAATTCATCAACAACTCTACCTTGCAAACCTAAGCTTAGACGCAATTTCTCATGAAATAGAGCGGCTCTGTTTTGTGAAACCCTTCTTCTGCTCAAGCTTTGCTCGTGTTTTGTCCATGGAAGCCGTTTCTCTCTCTCGCCACGGGGCTTCGCTCCCTCTTCATGGCTATGGTGGTTACCAAGAGCTTGGGTTTTCCAGTGCTTCATCTTCTCTGCCACTGTTCTCTCGAATGCTTATTGTAGCTAACCTAGTGCGAGATGAACTCTGGTGGTGCTAG

Protein sequence

IRILPTPCDFFCKKKKKSFCPTLVSSLSVSSAISGFSILSVLLITSIHQQLYLANLSLDAISHEIERLCFVKPFFCSSFARVLSMEAVSLSRHGASLPLHGYGGYQELGFSSASSSLPLFSRMLIVANLVRDELWWC
Homology
[Close]
BLAST of CmaCh09G012120 vs. ExPASy TrEMBL
Match: A0A6J1I8W7 (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111472571 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.6e-07
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 85  MEAVSLSRHGASLPLHGYGGYQELGFSSASSSLPLFS 122
           MEAVSLSRHGASLPLHGY GYQELGFSSASSSLP+ S
Sbjct: 1   MEAVSLSRHGASLPLHGY-GYQELGFSSASSSLPINS 36

[Close]
BLAST of CmaCh09G012120 vs. ExPASy TrEMBL
Match: A0A6J1ECC6 (1-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111432783 PE=3 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.6e-07
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 85  MEAVSLSRHGASLPLHGYGGYQELGFSSASSSLPLFS 122
           MEAVSLSRHGASLPLHGY GYQELGFSSASSSLP+ S
Sbjct: 1   MEAVSLSRHGASLPLHGY-GYQELGFSSASSSLPINS 36

[Close]
BLAST of CmaCh09G012120 vs. NCBI nr
Match: KAG7025213.1 (hypothetical protein SDJN02_14036, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 164.1 bits (414), Expect = 8.6e-37
Identity = 94/120 (78.33%), Postives = 95/120 (79.17%), Query Frame = 0 

Query: 1   IRILPTPCDFFCKKKKK-SFCPTLVSSLSVSSAISGFSILSVLLITSIHQQLYLANLSLD 60
           IRILP PCDFFCKKKKK SFCPTL SSLSVSSAISG                    LSLD
Sbjct: 16  IRILPIPCDFFCKKKKKTSFCPTLFSSLSVSSAISG--------------------LSLD 75

Query: 61  AISHEIERLCFVKPFFCSSFARVLSMEAVSLSRHGASLPLHGYGGYQELGFSSASSSLPL 120
           AISHEIERL FVKPFFCSSFARVLSMEAVSLSRHGASLPLHGY GYQELGFSSASSSLP+
Sbjct: 76  AISHEIERLWFVKPFFCSSFARVLSMEAVSLSRHGASLPLHGY-GYQELGFSSASSSLPV 114

[Close]
BLAST of CmaCh09G012120 vs. NCBI nr
Match: KAG6592403.1 (hypothetical protein SDJN03_14749, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 151.0 bits (380), Expect = 7.5e-33
Identity = 87/125 (69.60%), Postives = 97/125 (77.60%), Query Frame = 0 

Query: 19  FCPTLVSSLSVSSAISGFSILSVLLITSIHQQLYLAN------LSLDAISHEIERLCFVK 78
           +CP LV S +       F++   L +  +++  +L +      LSLDAISHEIERL FVK
Sbjct: 68  YCPFLVISSARRRRRRAFAL--PLSLRFLYRPPFLGSLFSRFCLSLDAISHEIERLWFVK 127

Query: 79  PFFCSSFARVLSMEAVSLSRHGASLPLHGYGGYQELGFSSASSSLPLFSRMLIVANLVRD 138
           PFFCSSFARVLSMEAVSLSRHGASLPLHGY GYQELGFSSASSSLP FSRMLIVANLVRD
Sbjct: 128 PFFCSSFARVLSMEAVSLSRHGASLPLHGY-GYQELGFSSASSSLPPFSRMLIVANLVRD 187

[Close]
BLAST of CmaCh09G012120 vs. NCBI nr
Match: XP_022973942.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucurbita maxima] >XP_022973943.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucurbita maxima] >XP_022973944.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 65.1 bits (157), Expect = 5.4e-07
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 85  MEAVSLSRHGASLPLHGYGGYQELGFSSASSSLPLFS 122
           MEAVSLSRHGASLPLHGY GYQELGFSSASSSLP+ S
Sbjct: 1   MEAVSLSRHGASLPLHGY-GYQELGFSSASSSLPINS 36

[Close]
BLAST of CmaCh09G012120 vs. NCBI nr
Match: XP_022925498.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucurbita moschata] >XP_022925499.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucurbita moschata] >XP_022925500.1 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 65.1 bits (157), Expect = 5.4e-07
Identity = 34/37 (91.89%), Postives = 35/37 (94.59%), Query Frame = 0 

Query: 85  MEAVSLSRHGASLPLHGYGGYQELGFSSASSSLPLFS 122
           MEAVSLSRHGASLPLHGY GYQELGFSSASSSLP+ S
Sbjct: 1   MEAVSLSRHGASLPLHGY-GYQELGFSSASSSLPINS 36

[Close]
BLAST of CmaCh09G012120 vs. NCBI nr
Match: XP_023535937.1 (1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 62.4 bits (150), Expect = 3.5e-06
Identity = 32/37 (86.49%), Postives = 34/37 (91.89%), Query Frame = 0 

Query: 85  MEAVSLSRHGASLPLHGYGGYQELGFSSASSSLPLFS 122
           ME+VSLSRHGAS PLHGY GYQELGFSSASSSLP+ S
Sbjct: 1   MESVSLSRHGASFPLHGY-GYQELGFSSASSSLPINS 36

The following BLAST results are available for this feature:
BLAST of CmaCh09G012120 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G012120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I8W72.6e-0791.891-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucurbita maxima OX=3661 GN=LO... [more]
A0A6J1ECC62.6e-0791.891-acyl-sn-glycerol-3-phosphate acyltransferase OS=Cucurbita moschata OX=3662 GN=... [more]
BLAST of CmaCh09G012120 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7025213.18.6e-3778.33hypothetical protein SDJN02_14036, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6592403.17.5e-3369.60hypothetical protein SDJN03_14749, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022973942.15.4e-0791.891-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucurbita ... [more]
XP_022925498.15.4e-0791.891-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like [Cucurbita ... [more]
XP_023535937.13.5e-0686.491-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic-like isoform X2 ... [more]
BLAST of CmaCh09G012120 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G012120.1CmaCh09G012120.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008654 phospholipid biosynthetic process
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003841 1-acylglycerol-3-phosphate O-acyltransferase activity