Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGAATCATCTGAAATTAAATCACGGCGTGGATCAAGATTTTTGAGTTCTCATCTCGAAGTAGAGAAATTTGATGGAACCAATAATTTTGGTGTTTGGGGAGGCAAAGTTAGCGATTTGCTGGGCATGCAAGATCTTGATGCTTCTCTCCAAGAGGTGATGCCTGAAGACATGACAGAAGCAAAATGGACGAAATTAAATTGGCAAGCTTGTGGAATTATTCGATCCTGTCTTGGCAAGGATCAGAAATATCCATTTATGAAGGTGACCATGGCGAAAGAACTATGAGACAAGCTTGAGGGAAATATATGCAGAAGAGTGTGGAAAATAAACTCTATTTGAAGAAGAAACTCTTCCGTTTTGACTATAAGAATAGGTATTTCAATGGCTGAGCATTTGGATGATTTTAACAAAATCATCACTAATTTGCTCAATCTTGATGTTAAGATTGATGATAAAGACAAGACGACGTTATTATTAAATTCTTTGTTGGAGTCCTACGAGTTTTTAGTAACCACTCTACTGCATGGAGCCTATGATATTGATTTTGAAGATGTTTCAAATGCCTTGATGAATAATGAGGTGCGAAAGAAGGAAAAGGAGGCATATCAAGATTCTAGCTCAAATGTTCTCACTGCTCGTGAAATGACTTCTACTTGGAAAAGGAGCGAATGTGGAGAGTCCCTATCAAAGTCAAGAGGTAGATATGGTAATTGGAGAAAACTTGATAAAAATGAGTGTGCATATTGTCGACAGAAAGGCCATTGGAAGAAAGATTACCCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTGGTTAGAGATGACGACACTGATACAGATAATGCCTTGACGATCTCTCAGTCAGCCAAACTAGTGAATGGATTCTTGATTTTGGGTGCTCCTATCATATGTATTCCAACAGAGAGATGTTTTTGGACTTCAAAGAGTTCAATGGTGGAGTTGTCTATATGGGCAATGATAATACTTGCAATATGA
mRNA sequence
ATGGCAGAATCATCTGAAATTAAATCACGGCGTGGATCAAGATTTTTGAGTTCTCATCTCGAAGTAGAGAAATTTGATGGAACCAATAATTTTGGTGTTTGGGGAGGCAAAGTTAGCGATTTGCTGGGCATGCAAGATCTTGATGCTTCTCTCCAAGAGGTGATGCCTGAAGACATGACAGAAGCAAAATGGACGAAATTAAATTGGCAAGCTTGTGGAATTATTCGATCCTGTCTTGGCAAGGATCAGAAATATCCATTTATGAAGATTGATGATAAAGACAAGACGACGTTATTATTAAATTCTTTGTTGGAGTCCTACGAGTTTTTAGTAACCACTCTACTGCATGGAGCCTATGATATTGATTTTGAAGATGTTTCAAATGCCTTGATGAATAATGAGGTGCGAAAGAAGGAAAAGGAGGCATATCAAGATTCTAGCTCAAATGTTCTCACTGCTCGTGAAATGACTTCTACTTGGAAAAGGAGCGAATGTGGAGAGTCCCTATCAAAGTCAAGAGGTAGATATGGTAATTGGAGAAAACTTGATAAAAATGAGTGTGCATATTGTCGACAGAAAGGCCATTGGAAGAAAGATTACCCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTGGTTAGAGATGACGACACTGATACAGATAATGCCTTGACGATCTCTCAGTCAGCCAAACTAGTGAATGGATTCTTGATTTTGGGTGCTCCTATCATATGTATTCCAACAGAGAGATGTTTTTGGACTTCAAAGAGTTCAATGGTGGAGTTGTCTATATGGGCAATGATAATACTTGCAATATGA
Coding sequence (CDS)
ATGGCAGAATCATCTGAAATTAAATCACGGCGTGGATCAAGATTTTTGAGTTCTCATCTCGAAGTAGAGAAATTTGATGGAACCAATAATTTTGGTGTTTGGGGAGGCAAAGTTAGCGATTTGCTGGGCATGCAAGATCTTGATGCTTCTCTCCAAGAGGTGATGCCTGAAGACATGACAGAAGCAAAATGGACGAAATTAAATTGGCAAGCTTGTGGAATTATTCGATCCTGTCTTGGCAAGGATCAGAAATATCCATTTATGAAGATTGATGATAAAGACAAGACGACGTTATTATTAAATTCTTTGTTGGAGTCCTACGAGTTTTTAGTAACCACTCTACTGCATGGAGCCTATGATATTGATTTTGAAGATGTTTCAAATGCCTTGATGAATAATGAGGTGCGAAAGAAGGAAAAGGAGGCATATCAAGATTCTAGCTCAAATGTTCTCACTGCTCGTGAAATGACTTCTACTTGGAAAAGGAGCGAATGTGGAGAGTCCCTATCAAAGTCAAGAGGTAGATATGGTAATTGGAGAAAACTTGATAAAAATGAGTGTGCATATTGTCGACAGAAAGGCCATTGGAAGAAAGATTACCCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTGGTTAGAGATGACGACACTGATACAGATAATGCCTTGACGATCTCTCAGTCAGCCAAACTAGTGAATGGATTCTTGATTTTGGGTGCTCCTATCATATGTATTCCAACAGAGAGATGTTTTTGGACTTCAAAGAGTTCAATGGTGGAGTTGTCTATATGGGCAATGATAATACTTGCAATATGA
Protein sequence
MAESSEIKSRRGSRFLSSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQACGIIRSCLGKDQKYPFMKIDDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNNEVRKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQKGHWKKDYPILKEKGSKSNVVRDDDTDTDNALTISQSAKLVNGFLILGAPIICIPTERCFWTSKSSMVELSIWAMIILAI
Homology
BLAST of CmaCh09G011010 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14
Identity = 75/262 (28.63%), Postives = 103/262 (39.31%), Query Frame = 0
Query: 21 EVEKFDGTNNFGVWGGKVSDLLGMQDLDASL--QEVMPEDMTEAKWTKLNWQACGIIRSC 80
EV KF+G N F W ++ DLL Q L L P+ M W L+ +A IR
Sbjct: 7 EVAKFNGDNGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMKAEDWADLDERAASAIRLH 66
Query: 81 LGKD-----------------------------------QKYPF---------------- 140
L D Q Y
Sbjct: 67 LSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFN 126
Query: 141 ----------MKIDDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNNEVRK 200
+KI+++DK LLLNSL SY+ L TT+LHG I+ +DV++AL+ NE +
Sbjct: 127 GLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMR 186
Query: 201 KEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQKGHWK 219
K+ E + L +++RS S +RG+ N K C C Q GH+K
Sbjct: 187 KKPE----NQGQALITEGRGRSYQRSSNNYGRSGARGKSKNRSKSRVRNCYNCNQPGHFK 246
BLAST of CmaCh09G011010 vs. ExPASy TrEMBL
Match:
A0A6J1EV26 (Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111437896 PE=4 SV=1)
HSP 1 Score: 347.1 bits (889), Expect = 6.9e-92
Identity = 187/285 (65.61%), Postives = 201/285 (70.53%), Query Frame = 0
Query: 11 RGSRFLSSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQ 70
RGSR S+LEVEKF+GTNNFGVW G+VSDLL MQDLDA+LQEVM EDMTEA+WTKLNWQ
Sbjct: 1482 RGSRLCRSNLEVEKFNGTNNFGVWRGEVSDLLVMQDLDATLQEVMLEDMTEAEWTKLNWQ 1541
Query: 71 ACGIIRSCLGKDQKYPFMKI---------------------------------------- 130
A GIIRSCLGKDQKYPFMK+
Sbjct: 1542 ASGIIRSCLGKDQKYPFMKVTMAKELWDKLEAKYMQKSVENKLYLKKKLFRFYYKEGISM 1601
Query: 131 -----------------DDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNN 190
DD+DK LLLNSL ESY+FLVTTLLHGAYDI+FEDVSNALMNN
Sbjct: 1602 ADHLDDFNKIITDLINLDDEDKALLLLNSLPESYKFLVTTLLHGAYDINFEDVSNALMNN 1661
Query: 191 EVRKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQK 239
EV+KKEK YQDSSSNVLTARE TSTWKRSECGES SKSRG+YGNW KLDKNECAY RQK
Sbjct: 1662 EVQKKEKGTYQDSSSNVLTARERTSTWKRSECGESRSKSRGKYGNWIKLDKNECAYGRQK 1721
BLAST of CmaCh09G011010 vs. ExPASy TrEMBL
Match:
A0A2R6RYD4 (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02232 PE=4 SV=1)
HSP 1 Score: 210.3 bits (534), Expect = 1.0e-50
Identity = 126/275 (45.82%), Postives = 154/275 (56.00%), Query Frame = 0
Query: 17 SSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQACGIIR 76
++ EVEKFDGTNNFG+W +V D+L QDLD +L E PEDM+E W KLN QACG IR
Sbjct: 25 NAKFEVEKFDGTNNFGMWQCEVLDVLIQQDLDITL-EAKPEDMSEKDWAKLNRQACGTIR 84
Query: 77 SCLGKDQKYPFMK----------------------------------------------- 136
CL KDQKY MK
Sbjct: 85 LCLAKDQKYFVMKETSAKELWDKLENKYMTKSVENRLYLKKKLFRFQFKQGTSMHEHLNA 144
Query: 137 --------------IDDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNNEV 196
IDD+DK LLLNSL ++YE L TTLL+G +I F DVSNALMNNEV
Sbjct: 145 FNKILADLQNLDVEIDDEDKALLLLNSLPDTYEHLTTTLLYGKDEIKFNDVSNALMNNEV 204
Query: 197 RKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQKGH 231
RKK+++A+++SSSN LTAR TST K +S SKSRG+ R+L K+ECAYC QKGH
Sbjct: 205 RKKDQDAHRESSSNALTARGRTSTRKSGGGWKSRSKSRGKSSERRQLAKDECAYCHQKGH 264
BLAST of CmaCh09G011010 vs. ExPASy TrEMBL
Match:
A0A2R6QHR4 (Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18495 PE=4 SV=1)
HSP 1 Score: 210.3 bits (534), Expect = 1.0e-50
Identity = 126/275 (45.82%), Postives = 154/275 (56.00%), Query Frame = 0
Query: 17 SSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQACGIIR 76
++ EVEKFDGTNNFG+W +V D+L QDLD +L E PEDM+E W KLN QACG IR
Sbjct: 25 NAKFEVEKFDGTNNFGMWQCEVLDVLIQQDLDITL-EAKPEDMSEKDWAKLNRQACGTIR 84
Query: 77 SCLGKDQKYPFMK----------------------------------------------- 136
CL KDQKY MK
Sbjct: 85 LCLAKDQKYFVMKETSAKELWDKLENKYMTKSVENRLYLKKKLFRFQFKQGTSMHEHLNA 144
Query: 137 --------------IDDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNNEV 196
IDD+DK LLLNSL ++YE L TTLL+G +I F DVSNALMNNEV
Sbjct: 145 FNKILADLQNLDVEIDDEDKALLLLNSLPDTYEHLTTTLLYGKDEIKFNDVSNALMNNEV 204
Query: 197 RKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQKGH 231
RKK+++A+++SSSN LTAR TST K +S SKSRG+ R+L K+ECAYC QKGH
Sbjct: 205 RKKDQDAHRESSSNALTARGRTSTRKSGGGWKSRSKSRGKSSERRQLAKDECAYCHQKGH 264
BLAST of CmaCh09G011010 vs. ExPASy TrEMBL
Match:
A0A5H2XKY8 (DEAD/DEAH box RNA helicase family protein OS=Prunus dulcis OX=3755 GN=Prudu_583S000500 PE=4 SV=1)
HSP 1 Score: 170.2 bits (430), Expect = 1.2e-38
Identity = 115/315 (36.51%), Postives = 162/315 (51.43%), Query Frame = 0
Query: 17 SSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQACGIIR 76
S+ LEV+KF+G+NNFG+W +V D+L Q+LD L++ PED+ + +WT++N AC IR
Sbjct: 30 STRLEVDKFNGSNNFGMWQCEVMDVLYQQELDMVLED-KPEDIDDKQWTRINLHACATIR 89
Query: 77 SCLGKDQKYPFMK----------------------------------------------- 136
S L K+ KYP+MK
Sbjct: 90 SFLDKELKYPYMKETSAKKLWMKLEEKYMTKSAENRLFLKKRLFRFQYRSGISMHEHLND 149
Query: 137 --------------IDDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNNEV 196
I D+DK LLNSL + Y+ L TTLL+G ++ ++VS AL+N+E
Sbjct: 150 YNKILADLANLDVIIPDEDKALCLLNSLPDDYDHLTTTLLYGKSEVKLDEVSAALVNHEC 209
Query: 197 RKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQKGH 256
RKKE++ Q+S + L AR T K + G+S SKSRG++ K+ECA+CRQKGH
Sbjct: 210 RKKEQKT-QNSQTEALVARGRTEERKSGKRGKSRSKSRGKFP-----AKDECAFCRQKGH 269
Query: 257 WKKDYPILKEKGSKSNVVRDDDTDTDNALTISQSAKLV--------NGFLILGAPIICIP 263
WKKD P LK K + V++ + + + IS LV +GF I APIIC+P
Sbjct: 270 WKKDCPKLKNKRRRKRVLKQMLQNLE--MKISSLLWLVHLLMVTQLSGFWIQVAPIICVP 329
BLAST of CmaCh09G011010 vs. ExPASy TrEMBL
Match:
A0A4U5N9T9 (CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000281560 PE=4 SV=1)
HSP 1 Score: 168.7 bits (426), Expect = 3.4e-38
Identity = 110/279 (39.43%), Postives = 146/279 (52.33%), Query Frame = 0
Query: 17 SSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQACGIIR 76
++ EVEKFDG NFG+W +V D+L +LD +L++ PED+ E W ++N AC IR
Sbjct: 24 NTKFEVEKFDGKGNFGMWKCEVMDMLVQMNLDFTLED-KPEDLDEKSWERINRLACSSIR 83
Query: 77 SCLGKDQKYPF------------------------------------------------- 136
CL KDQKY F
Sbjct: 84 LCLVKDQKYAFSEQNSAKELWQALEDKFMKKSIENRLYLKKRIFRFQHKKGTSMNEHLND 143
Query: 137 ------------MKIDDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNNEV 196
++IDD+DK LLLNSL ++YE LVTTLL+G I F DVSNAL+NNE
Sbjct: 144 FNKMIADLKNLDVEIDDEDKALLLLNSLPDTYEHLVTTLLYGKEKIKFIDVSNALVNNEY 203
Query: 197 RKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQKGH 232
RKK++ +++S+S LT R T+ + G S SKSRG N R L K+ECA+C +KGH
Sbjct: 204 RKKDQIVHKESTSEALTVRGRTNPRRFRGRGRSRSKSRGESSNRRYLAKDECAFCHKKGH 263
BLAST of CmaCh09G011010 vs. NCBI nr
Match:
XP_022931734.1 (uncharacterized protein LOC111437896 [Cucurbita moschata])
HSP 1 Score: 347.1 bits (889), Expect = 1.4e-91
Identity = 187/285 (65.61%), Postives = 201/285 (70.53%), Query Frame = 0
Query: 11 RGSRFLSSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQ 70
RGSR S+LEVEKF+GTNNFGVW G+VSDLL MQDLDA+LQEVM EDMTEA+WTKLNWQ
Sbjct: 1482 RGSRLCRSNLEVEKFNGTNNFGVWRGEVSDLLVMQDLDATLQEVMLEDMTEAEWTKLNWQ 1541
Query: 71 ACGIIRSCLGKDQKYPFMKI---------------------------------------- 130
A GIIRSCLGKDQKYPFMK+
Sbjct: 1542 ASGIIRSCLGKDQKYPFMKVTMAKELWDKLEAKYMQKSVENKLYLKKKLFRFYYKEGISM 1601
Query: 131 -----------------DDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNN 190
DD+DK LLLNSL ESY+FLVTTLLHGAYDI+FEDVSNALMNN
Sbjct: 1602 ADHLDDFNKIITDLINLDDEDKALLLLNSLPESYKFLVTTLLHGAYDINFEDVSNALMNN 1661
Query: 191 EVRKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQK 239
EV+KKEK YQDSSSNVLTARE TSTWKRSECGES SKSRG+YGNW KLDKNECAY RQK
Sbjct: 1662 EVQKKEKGTYQDSSSNVLTARERTSTWKRSECGESRSKSRGKYGNWIKLDKNECAYGRQK 1721
BLAST of CmaCh09G011010 vs. NCBI nr
Match:
PSS35035.1 (Endonuclease [Actinidia chinensis var. chinensis])
HSP 1 Score: 210.3 bits (534), Expect = 2.1e-50
Identity = 126/275 (45.82%), Postives = 154/275 (56.00%), Query Frame = 0
Query: 17 SSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQACGIIR 76
++ EVEKFDGTNNFG+W +V D+L QDLD +L E PEDM+E W KLN QACG IR
Sbjct: 25 NAKFEVEKFDGTNNFGMWQCEVLDVLIQQDLDITL-EAKPEDMSEKDWAKLNRQACGTIR 84
Query: 77 SCLGKDQKYPFMK----------------------------------------------- 136
CL KDQKY MK
Sbjct: 85 LCLAKDQKYFVMKETSAKELWDKLENKYMTKSVENRLYLKKKLFRFQFKQGTSMHEHLNA 144
Query: 137 --------------IDDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNNEV 196
IDD+DK LLLNSL ++YE L TTLL+G +I F DVSNALMNNEV
Sbjct: 145 FNKILADLQNLDVEIDDEDKALLLLNSLPDTYEHLTTTLLYGKDEIKFNDVSNALMNNEV 204
Query: 197 RKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQKGH 231
RKK+++A+++SSSN LTAR TST K +S SKSRG+ R+L K+ECAYC QKGH
Sbjct: 205 RKKDQDAHRESSSNALTARGRTSTRKSGGGWKSRSKSRGKSSERRQLAKDECAYCHQKGH 264
BLAST of CmaCh09G011010 vs. NCBI nr
Match:
PSS08126.1 (Endonuclease [Actinidia chinensis var. chinensis])
HSP 1 Score: 210.3 bits (534), Expect = 2.1e-50
Identity = 126/275 (45.82%), Postives = 154/275 (56.00%), Query Frame = 0
Query: 17 SSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQACGIIR 76
++ EVEKFDGTNNFG+W +V D+L QDLD +L E PEDM+E W KLN QACG IR
Sbjct: 25 NAKFEVEKFDGTNNFGMWQCEVLDVLIQQDLDITL-EAKPEDMSEKDWAKLNRQACGTIR 84
Query: 77 SCLGKDQKYPFMK----------------------------------------------- 136
CL KDQKY MK
Sbjct: 85 LCLAKDQKYFVMKETSAKELWDKLENKYMTKSVENRLYLKKKLFRFQFKQGTSMHEHLNA 144
Query: 137 --------------IDDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNNEV 196
IDD+DK LLLNSL ++YE L TTLL+G +I F DVSNALMNNEV
Sbjct: 145 FNKILADLQNLDVEIDDEDKALLLLNSLPDTYEHLTTTLLYGKDEIKFNDVSNALMNNEV 204
Query: 197 RKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQKGH 231
RKK+++A+++SSSN LTAR TST K +S SKSRG+ R+L K+ECAYC QKGH
Sbjct: 205 RKKDQDAHRESSSNALTARGRTSTRKSGGGWKSRSKSRGKSSERRQLAKDECAYCHQKGH 264
BLAST of CmaCh09G011010 vs. NCBI nr
Match:
BBN68803.1 (DEAD/DEAH box RNA helicase family protein [Prunus dulcis])
HSP 1 Score: 170.2 bits (430), Expect = 2.4e-38
Identity = 115/315 (36.51%), Postives = 162/315 (51.43%), Query Frame = 0
Query: 17 SSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQACGIIR 76
S+ LEV+KF+G+NNFG+W +V D+L Q+LD L++ PED+ + +WT++N AC IR
Sbjct: 30 STRLEVDKFNGSNNFGMWQCEVMDVLYQQELDMVLED-KPEDIDDKQWTRINLHACATIR 89
Query: 77 SCLGKDQKYPFMK----------------------------------------------- 136
S L K+ KYP+MK
Sbjct: 90 SFLDKELKYPYMKETSAKKLWMKLEEKYMTKSAENRLFLKKRLFRFQYRSGISMHEHLND 149
Query: 137 --------------IDDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNNEV 196
I D+DK LLNSL + Y+ L TTLL+G ++ ++VS AL+N+E
Sbjct: 150 YNKILADLANLDVIIPDEDKALCLLNSLPDDYDHLTTTLLYGKSEVKLDEVSAALVNHEC 209
Query: 197 RKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQKGH 256
RKKE++ Q+S + L AR T K + G+S SKSRG++ K+ECA+CRQKGH
Sbjct: 210 RKKEQKT-QNSQTEALVARGRTEERKSGKRGKSRSKSRGKFP-----AKDECAFCRQKGH 269
Query: 257 WKKDYPILKEKGSKSNVVRDDDTDTDNALTISQSAKLV--------NGFLILGAPIICIP 263
WKKD P LK K + V++ + + + IS LV +GF I APIIC+P
Sbjct: 270 WKKDCPKLKNKRRRKRVLKQMLQNLE--MKISSLLWLVHLLMVTQLSGFWIQVAPIICVP 329
BLAST of CmaCh09G011010 vs. NCBI nr
Match:
TKR78591.1 (hypothetical protein D5086_0000281560 [Populus alba])
HSP 1 Score: 168.7 bits (426), Expect = 6.9e-38
Identity = 110/279 (39.43%), Postives = 146/279 (52.33%), Query Frame = 0
Query: 17 SSHLEVEKFDGTNNFGVWGGKVSDLLGMQDLDASLQEVMPEDMTEAKWTKLNWQACGIIR 76
++ EVEKFDG NFG+W +V D+L +LD +L++ PED+ E W ++N AC IR
Sbjct: 24 NTKFEVEKFDGKGNFGMWKCEVMDMLVQMNLDFTLED-KPEDLDEKSWERINRLACSSIR 83
Query: 77 SCLGKDQKYPF------------------------------------------------- 136
CL KDQKY F
Sbjct: 84 LCLVKDQKYAFSEQNSAKELWQALEDKFMKKSIENRLYLKKRIFRFQHKKGTSMNEHLND 143
Query: 137 ------------MKIDDKDKTTLLLNSLLESYEFLVTTLLHGAYDIDFEDVSNALMNNEV 196
++IDD+DK LLLNSL ++YE LVTTLL+G I F DVSNAL+NNE
Sbjct: 144 FNKMIADLKNLDVEIDDEDKALLLLNSLPDTYEHLVTTLLYGKEKIKFIDVSNALVNNEY 203
Query: 197 RKKEKEAYQDSSSNVLTAREMTSTWKRSECGESLSKSRGRYGNWRKLDKNECAYCRQKGH 232
RKK++ +++S+S LT R T+ + G S SKSRG N R L K+ECA+C +KGH
Sbjct: 204 RKKDQIVHKESTSEALTVRGRTNPRRFRGRGRSRSKSRGESSNRRYLAKDECAFCHKKGH 263
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P10978 | 1.5e-14 | 28.63 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EV26 | 6.9e-92 | 65.61 | Reverse transcriptase OS=Cucurbita moschata OX=3662 GN=LOC111437896 PE=4 SV=1 | [more] |
A0A2R6RYD4 | 1.0e-50 | 45.82 | Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc02232 ... | [more] |
A0A2R6QHR4 | 1.0e-50 | 45.82 | Endonuclease OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc18495 ... | [more] |
A0A5H2XKY8 | 1.2e-38 | 36.51 | DEAD/DEAH box RNA helicase family protein OS=Prunus dulcis OX=3755 GN=Prudu_583S... | [more] |
A0A4U5N9T9 | 3.4e-38 | 39.43 | CCHC-type domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000281560... | [more] |
Match Name | E-value | Identity | Description | |
XP_022931734.1 | 1.4e-91 | 65.61 | uncharacterized protein LOC111437896 [Cucurbita moschata] | [more] |
PSS35035.1 | 2.1e-50 | 45.82 | Endonuclease [Actinidia chinensis var. chinensis] | [more] |
PSS08126.1 | 2.1e-50 | 45.82 | Endonuclease [Actinidia chinensis var. chinensis] | [more] |
BBN68803.1 | 2.4e-38 | 36.51 | DEAD/DEAH box RNA helicase family protein [Prunus dulcis] | [more] |
TKR78591.1 | 6.9e-38 | 39.43 | hypothetical protein D5086_0000281560 [Populus alba] | [more] |
Match Name | E-value | Identity | Description | |