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CmaCh09G010860 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCGCCAAACAGATGCAATTCCGCACCACATCCACACAAAAATCGAAGAACTAAATCCTTCTCGTCTTTGATCTCCCAATTTCTAGGCACTTCCGTCTCCAATCCTTAATCATTCTGATTCCTCCATTTCTGCAATTCGTATCCAGAAATCATCGTTTCTGGGTTCGAATGGGATCGACTATGTTCGCCACTGTTCCATTCTCCTGCAACTTTCACCAATCAAAGCCTCCTTCCCAAATTCTCCAAAAGGGGGTTCCGGCCGTCGGTGGCGAAAAGGAGAATCGGTCTCCCATTTTGAATCGGAGATCGGTTTTGCTATCCGGCGTTTCTTTGGTTTCTTCTGCGGGTTTGGGGCTGCAGAGCGAGTGTTTGGCTGCGGTTAAGCAAGGTCTTCTTGCTGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGCTTTTTTCTTAACCTCTTGAACTCTGTATCTAAGTAATCCTTACCGTCGTTTTGTTTCTTGTTTACATCTATGATTTGTTTCTTTGTTTCAATTGTTGGAATCTTCTGGTTGCTGCAGATTGTGGATTGTGAAATACCTTTGTTCACTCTATGTGTATGAACTTTAATATCTAACCTTTTTTTAGTTCATGTATTTTAAAATTTGTAATGGTTCATGTAGAATTTTTAGCACGTGTTGATGGATTAATCTTTAGAGAACAAATATGTTTTTAAACTAGAGAATAGATATTGAAAATGATGCATAATTTTCTATATTCTTTTTGGTGCTGTAGTTAGTTAATTACATCCTGTTAGTTTTTGGAGTTTGTATTGTTTTGGTGAGATCCCACATTGATTAGAGAAGGGAACGACATTGATGGGAGAGGGGAACGAGTGCCAGTGAAAATGCTGGTCCCGAATAGGAGTGGATTGTGAGATCCCACATTGGTTGGGGAGGAGAACGAAGCATTCTTAATAAGGGTGAGGAAACCTCTCCCTATCATTCGCGTTTTGAAAACCTTGTGGGAAAGTCCAAAAGGAGAAAGCTCAAAGAGGACAATATATGCTAGCGATAGGCTTAAGCTGTTACAAAATGGTATCAGAGTCAGACATTGGGCAGTGTGCCAGCGAAGATACTGGGCCTCGAAGGGGGGTGGATTATGAGATCCCACATCGATTAGAGAAGGGAACGAGTGCTAGTGAGCATGCTGGCCCCGACGGGGGTGGATTGTGAGATCCCACATAATGATGAGAAGGGAACGATTGGAGAGGGGAACGAGTGCTAATGAGCACACTGGCCTCGAAGGGGGGTGGATTGTCAGATCTACTGTCAGCGGTGGGCTTGGGCTGCTAGCGGTGAGATCCGCTGCATCAAAAGAAGCAAACAGAGCTGATCATGCCGTGTTTTCTATATCAAGTTTACATAGCATCTGTTGTGCTTGTGCAGGAATCTCTTGTATTAATCAGAATATATGCAGCAAATTTCATTTTTGACCATTGAAAGCTTTTAAACTCAAGCTTAGCATATCTGGTTTCTTGTTTGTTGCCTGCTCAGACAGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGACTGGGAAGAGGTAACTGCTGTTAGATGTTTTTTCCCTTTTAACCTTATTAAAGATGCTGCTAAAGGAGTACAAAAGAAACAAATGGCTTCTACTTCAATCAGTTCTTCATTAGATCAGAGAAACTAACGAAACTTGATGAACCACTTTAGCTAATAAACGGTAATGACCCTAGATTTCTACTTAATCTAAAGTCGCTGCTGTATACATATCATAGTCATTTTTATGTGGAAATAATTCATTTGAAACTTCTACATAAAACACCGTCATGGGCTTACGTGTTCGAAAATGTCTTTAAGACGACATAATGAAATATTAAATAAAATAAATAAACATTTCAGAGTCATATCATTTCATAAACATATCATTTTCTAACTATTTCACACATATTAAGCACATGACACATGCAGAACCATGGAGCACGTGTCATCATACAACAACAATGTCTAACCATATTGATAGTAAGACCATTTACTTGGTTGGCGCCTTAGCCAGTGTTCTCCCTAAATTTAATTGCTCTAGTTCGTCTTTGAGGTTGTTCCAATTATTGTCCAACGTTTCTGGGTCCGTTGTCTTTTGTTATTTACATTGGGGTGCGTCAAGTTTCCTGTTGATTAGAGGAGTAAGCACAATGTATCATGTAATGTCCCAAGATCACCGCTAGCGGATATTGTCCTCTTTGGACTTTTCGTTTGAAGCTGACCCTCAAGGTTTTCAAAATGTGACTGTTAGGGAGAGGTTTACACACCTTTATAAATAATGTTTCGTTCTCCTCCCCAACCGATGTGGAATCTCACAATCCACCCCCCTTTGGGCCAGCATCCTAACTGGCACTCGTTTCTTTCTCCAATCGATGTGGGACCCCCCCAATCCACCCCCCTTTCGGGTCCAATGTCCTTGCTGGCACACCGCCTCGTGTCCACCTCCTTCGAGTTTCAGCCTCCTCGCTGACACATCGCCTCGTGTTTAGCTCTGATACCATTTGTAATGCCCCAAGCCCATCACTAGCAGATATTGTCCTCTTTGGGCTTTCTCTTTCGGATTTTTCCTCGAGGTTTTTAAAATGCCTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATACTTTGTTTTCCTTCCCAATCGATGTGGGATCTACTTTAATCTGCATCGAATGATATTGAGATATTGATATGTATTCCCAATTTATTTCTCTGATATGTATGCCCAATTTATTCCTTTGCTAGGAATGGAAAAGTCTCGTGCTAGTTAGATATGTCCATGCAAGTTAACTTCATTTTTATTTTGATCAAAGCAGACATGACACAAAGTGGTTTTGAGTGGCAGGTTCCTGTGTCAATTGCTGATCTTGGAGGGACAGAGATTGATCTCAGATTCAAAAGCTCAAAGGAAGGTCGTCTGTTCGTCATCGTTGCGCCCGTTCAACGATTTTCCGATGGTGCATTTCCCTGAAACTTTGTACTTGTTCAACTTTCCATTTTAAAGAAACTACACTGCTAAATGATGCATTCATTGTCATAATCCTGTGAAGTTATCGGCGACGATGCAACGATTGAAATGGTTGGCCCTCCAGAGAAAGTAATCAGCGCGTTCGGACCAGAAGTGATCGGAGAAAACGTAGAAGGGAAGGTGATGAACATGAGCGTGGCAGAGCATAATGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTGATCACAGCAACAGCGGCAGGAAACCGTCTGTATCTATTCAGTGTAACAGGAAATGGTAAGACACTACCAAGAACGCTGCTGATATGATATGATATGATATCAATTGTTTTCCATTAAAACTGAAGGAAGCTTGTTTTTGTTTCTCTGGGTGTTCTTATAGGGCTTCAATGGAAGAGACATTACAGCGACCTGAAGCGGATAGCGGATTCCTTTCGTGTTGTGTGATGAAGTTATTTTGGAGCTCGTTGGAGTATATACATATTCAGTGTGATTTACAAAACAACAGTTGCTCAAAGCATTAGTGACTCGAGAAATTTGAATGTAGTTCACAACCCAACTCAACCTTCTACTTTCGAGCTGGGTTAGGTTGTGTTGTTGGATTATTTTTAAAAAATTACTCGCATCACTAACTTAAGTTATCACTGTTAAAAAAAAAAAGCAAATAATTATCGAATAAATTGCAATTTCTTCCTAAT GCGCCAAACAGATGCAATTCCGCACCACATCCACACAAAAATCGAAGAACTAAATCCTTCTCGTCTTTGATCTCCCAATTTCTAGGCACTTCCGTCTCCAATCCTTAATCATTCTGATTCCTCCATTTCTGCAATTCGTATCCAGAAATCATCGTTTCTGGGTTCGAATGGGATCGACTATGTTCGCCACTGTTCCATTCTCCTGCAACTTTCACCAATCAAAGCCTCCTTCCCAAATTCTCCAAAAGGGGGTTCCGGCCGTCGGTGGCGAAAAGGAGAATCGGTCTCCCATTTTGAATCGGAGATCGGTTTTGCTATCCGGCGTTTCTTTGGTTTCTTCTGCGGGTTTGGGGCTGCAGAGCGAGTGTTTGGCTGCGGTTAAGCAAGGTCTTCTTGCTGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGACTGGGAAGAGGTTCCTGTGTCAATTGCTGATCTTGGAGGGACAGAGATTGATCTCAGATTCAAAAGCTCAAAGGAAGGTCGTCTGTTCGTCATCGTTGCGCCCGTTCAACGATTTTCCGATGTTATCGGCGACGATGCAACGATTGAAATGGTTGGCCCTCCAGAGAAAGTAATCAGCGCGTTCGGACCAGAAGTGATCGGAGAAAACGTAGAAGGGAAGGTGATGAACATGAGCGTGGCAGAGCATAATGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTGATCACAGCAACAGCGGCAGGAAACCGTCTGTATCTATTCAGTGTAACAGGAAATGGGCTTCAATGGAAGAGACATTACAGCGACCTGAAGCGGATAGCGGATTCCTTTCGTGTTGTGTGATGAAGTTATTTTGGAGCTCGTTGGAGTATATACATATTCAGTGTGATTTACAAAACAACAGTTGCTCAAAGCATTAGTGACTCGAGAAATTTGAATGTAGTTCACAACCCAACTCAACCTTCTACTTTCGAGCTGGGTTAGGTTGTGTTGTTGGATTATTTTTAAAAAATTACTCGCATCACTAACTTAAGTTATCACTGTTAAAAAAAAAAAGCAAATAATTATCGAATAAATTGCAATTTCTTCCTAAT ATGGGATCGACTATGTTCGCCACTGTTCCATTCTCCTGCAACTTTCACCAATCAAAGCCTCCTTCCCAAATTCTCCAAAAGGGGGTTCCGGCCGTCGGTGGCGAAAAGGAGAATCGGTCTCCCATTTTGAATCGGAGATCGGTTTTGCTATCCGGCGTTTCTTTGGTTTCTTCTGCGGGTTTGGGGCTGCAGAGCGAGTGTTTGGCTGCGGTTAAGCAAGGTCTTCTTGCTGGGAGGATTCCTGGGTTGTCTGAACCAGATGAACAGGGTTGGAGGACATATCGTAGACCCGACGAGAAGTCCGGTGGGCATGGAGTTGGATGGAGTCCTATTATTCCTTATGCCTTTTCAGTTCCACAAGACTGGGAAGAGGTTCCTGTGTCAATTGCTGATCTTGGAGGGACAGAGATTGATCTCAGATTCAAAAGCTCAAAGGAAGGTCGTCTGTTCGTCATCGTTGCGCCCGTTCAACGATTTTCCGATGTTATCGGCGACGATGCAACGATTGAAATGGTTGGCCCTCCAGAGAAAGTAATCAGCGCGTTCGGACCAGAAGTGATCGGAGAAAACGTAGAAGGGAAGGTGATGAACATGAGCGTGGCAGAGCATAATGGAAGAACATATTATCAGTTTGAATTGGAGCCTCCTCATGTTTTGATCACAGCAACAGCGGCAGGAAACCGTCTGTATCTATTCAGTGTAACAGGAAATGGGCTTCAATGGAAGAGACATTACAGCGACCTGAAGCGGATAGCGGATTCCTTTCGTGTTGTGTGA MGSTMFATVPFSCNFHQSKPPSQILQKGVPAVGGEKENRSPILNRRSVLLSGVSLVSSAGLGLQSECLAAVKQGLLAGRIPGLSEPDEQGWRTYRRPDEKSGGHGVGWSPIIPYAFSVPQDWEEVPVSIADLGGTEIDLRFKSSKEGRLFVIVAPVQRFSDVIGDDATIEMVGPPEKVISAFGPEVIGENVEGKVMNMSVAEHNGRTYYQFELEPPHVLITATAAGNRLYLFSVTGNGLQWKRHYSDLKRIADSFRVV Homology
BLAST of CmaCh09G010860 vs. ExPASy Swiss-Prot
Match: O49292 (PsbP domain-containing protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD4 PE=1 SV=2) HSP 1 Score: 360.5 bits (924), Expect = 1.5e-98 Identity = 177/226 (78.32%), Postives = 195/226 (86.28%), Query Frame = 0
BLAST of CmaCh09G010860 vs. ExPASy Swiss-Prot
Match: Q9LXX5 (PsbP domain-containing protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PPD6 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 8.7e-17 Identity = 70/265 (26.42%), Postives = 131/265 (49.43%), Query Frame = 0
BLAST of CmaCh09G010860 vs. ExPASy TrEMBL
Match: A0A6J1IFH3 (psbP domain-containing protein 4, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111473925 PE=4 SV=1) HSP 1 Score: 525.0 bits (1351), Expect = 1.8e-145 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of CmaCh09G010860 vs. ExPASy TrEMBL
Match: A0A6J1FDH1 (psbP domain-containing protein 4, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111443110 PE=4 SV=1) HSP 1 Score: 518.8 bits (1335), Expect = 1.3e-143 Identity = 254/258 (98.45%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of CmaCh09G010860 vs. ExPASy TrEMBL
Match: A0A6J1DKA3 (psbP domain-containing protein 4, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111021699 PE=4 SV=1) HSP 1 Score: 434.9 bits (1117), Expect = 2.4e-118 Identity = 212/259 (81.85%), Postives = 230/259 (88.80%), Query Frame = 0
BLAST of CmaCh09G010860 vs. ExPASy TrEMBL
Match: A0A0A0K501 (PsbP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G322590 PE=4 SV=1) HSP 1 Score: 428.7 bits (1101), Expect = 1.7e-116 Identity = 215/268 (80.22%), Postives = 235/268 (87.69%), Query Frame = 0
BLAST of CmaCh09G010860 vs. ExPASy TrEMBL
Match: A0A5A7T2U1 (PsbP domain-containing protein 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1784G00200 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 2.7e-114 Identity = 216/268 (80.60%), Postives = 233/268 (86.94%), Query Frame = 0
BLAST of CmaCh09G010860 vs. NCBI nr
Match: XP_022975015.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita maxima]) HSP 1 Score: 525.0 bits (1351), Expect = 3.6e-145 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of CmaCh09G010860 vs. NCBI nr
Match: KAG6592174.1 (PsbP domain-containing protein 4, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 521.5 bits (1342), Expect = 4.0e-144 Identity = 256/258 (99.22%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of CmaCh09G010860 vs. NCBI nr
Match: XP_022936523.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita moschata] >KAG7025035.1 PsbP domain-containing protein 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 518.8 bits (1335), Expect = 2.6e-143 Identity = 254/258 (98.45%), Postives = 257/258 (99.61%), Query Frame = 0
BLAST of CmaCh09G010860 vs. NCBI nr
Match: XP_023534875.1 (psbP domain-containing protein 4, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 518.8 bits (1335), Expect = 2.6e-143 Identity = 254/258 (98.45%), Postives = 256/258 (99.22%), Query Frame = 0
BLAST of CmaCh09G010860 vs. NCBI nr
Match: XP_022154428.1 (psbP domain-containing protein 4, chloroplastic [Momordica charantia]) HSP 1 Score: 434.9 bits (1117), Expect = 4.9e-118 Identity = 212/259 (81.85%), Postives = 230/259 (88.80%), Query Frame = 0
BLAST of CmaCh09G010860 vs. TAIR 10
Match: AT1G77090.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein ) HSP 1 Score: 360.5 bits (924), Expect = 1.1e-99 Identity = 177/226 (78.32%), Postives = 195/226 (86.28%), Query Frame = 0
BLAST of CmaCh09G010860 vs. TAIR 10
Match: AT3G56650.1 (Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein ) HSP 1 Score: 89.0 bits (219), Expect = 6.2e-18 Identity = 70/265 (26.42%), Postives = 131/265 (49.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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