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CmaCh09G010690 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTATAAGCTCGAGGGGCGAAGCTTCGTCCAAAATCAGTATTATCATCGGCTTCTCCATTCTTATTCCAATCGGCAAAGTTTGCGAAGGCGTTTGAGCGAAGATGTCACGATCGCTGGTGCAGCCGATCGGGCAGAAGAGGCTGACGAACGTGGCGGTTGTTCGTTTGAAGAGACACGGTCTGCGCTTTGAGATCGCTTGTTACAAGAACAAGGTCCTTTCTTGGCGCTCTGGCGTGTAAGCTCCATATCCACCTCCTTTAGACCCTGTGATTTCACTCTCTCAGTTATTTTATTTTCTCTGGTTGTTGTTTGTTAGGTTCTTATGGATAGAAGATTGAAAAGGTTTGATGTTATATTAGGATTGATTTTGTAGATATATTTGTCAAAATGGAGGATTTCATTGGCTAACGGATTCGAAAAAATCTCTTTAAATTGCATAATGTGTATGACACAGCTTTGATTGTGGTTATATGTGTCTGTTTGCTAATTGAGAGTTTGGGGAGGAAGAAGAGTTGTGATTAACTAGCCTCCAATTGCACACGATTATGCCCAAAATTTAATGTTCTTCTCATTTTCTTGGCAACCAAACCTAATAGGGTTAGGTTAGGTGGTTGTCTCAGCTGTGCACAAGAGTGATAGATTCTTACTGTTTTAATAGGTTCTTTCTAGCTCTTTTGTGCAAGGGAAGGTATCCTTTTTTTTTTATTTGTTGAGTTCAACAACACGGGTTTGAACTTCTAGGTGGTTTCTAGCAAATATTTTCATGGTATTAGAGCCCCTTCGTTTTAGCCACCAATATCCTTCTCCATGGCTTTTGAATCCTGATACCATGAGAATATTTGCTAAAACCAAAGTAACTAAAGGGGTGAGAGTTCTCTATTTATAATTATTTATAGAATCAAATAAATTGATACACGATATTTGACTATAATAAATAGTCAAATATGATACCTATGGTAAACAGTAATGGAAGATTTAATATCCTCATTCATACCAAATATTTGCCTATAATAAGGGTCAAATATGATACATATGGTAAACCATAATTCAAGACTGAATATCCTCAAACACTTCTAACCTATTGATCGAGGGTAACGTGTCTTAGCATGAGTTATCTAAGTTGACAGTTTTCCTTGAGAGAGAGTAAGTCTCTTAGCATGAGTTATCCAAGTTGACATTTTTCCTTGAGAGAGTGTAAGTCGATACCCCATAGTTTTTACAATTTGAAAATAATTGCATGAACTATATAGTTAGCTAAAGAGCAAAAGACACTGCTTTTAAACTTCATTGTTTATAACTATTCCATTGGCATGCCATTTTTAGTAGATTCCACAGTATTGCCCTTTTAGAAAATCTTATGATTGTGGGTAAATATATTAGTTAAACAGACCTCTCGTCAAGTGACGACATGAGTTGGAGTGGTAATTTATTAAATTAGGTGGATGTGAATATAAACTATCAGATCTTTTTGATACTTCTGTGCTCAATTTGCAATTGGATCAAACTGCAAGGTTGTCTTTTGCAGTTTTCCTTTCGTTAATTCATTTTCCTTCCCAAATGTGTACTCATTGACCTACGTTGGTATTAATTTATGCTTGTATCACATAGTGTGTCAACTATGAACATGATAATGGATGTTTCAACAGGGAGAAAGATTTAGATGAGGTCTTGCAATCGCAAATTGTTTATTCAAATGTTTCGAAAGGAGTTCTTGCAAAAACCAAAGATTTAAAAGCAGCTTTTGATACAGATGATCAGGCGGAAATTTGTTTGAAGGTTCGTGGAATTTTTTTCTAATTTTGTTATGAGTGTATGATTTTGTGGTGACTTTTTATGAACTGATGAGATCATCAACTTTCTGGTACTAGATTCTTAAAGAAGGGGAACTTCAAATTGCAGGGAAGGAGAGGGAGGCTCAATTATCTAATCAGTTTCGTGATATTGCAACCATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACGATTAGTATGATTGAGCGACTCATGCGCGAAATTCATTTTGCTGTTGATCCAAATCACAGCTCAAAGAAACAGGTAGCTTGATACTTTTTGCTGTATGTGAGATTGACATTCTTCTGCTCGAAATTTGTATAATTCTAAATTCAAGGTCGCAATATTAATCTGACATTTTTTTTTTGAAATGCAGGCATTAGAGGTCATTCATGAGCTTCAGAAACAGTTCCCAATTAAACGTTCGCCTATGAGAATACGATATACTGTACCTGAACAGAACTTTCCATCTCTCCTTGATAAGTTGAATTCCTGGAGTGCTAGTATCATTTCCAATGATCAGTCTGGAAATCAGCAACGAAGTGTTGTAAGTCTGAGTCTTCTCATTGTTGCTTTGAATATTTTTTTTCCCTCCAACTTGCTAATAATATCATAATTTCACTCTTTCTCCTTGAACAAGTTTAACTGTTGTATTGCATATTGGTTCCTGCATGGGTGTCAATGTGCTAGTAGTTGCCCATGTGTTGGAATAGGTCATGTTAAATCGTGGGAACCAAGATTTTAGCAAGCTAGCCATTTCGACCTAGCCATGAACGTCGTTCTTCGTGAATGATTCACTCTTGATGTTTATGTGATAGAAATTTCAAGCAAGGTTTAGAAATTTAGTTGTGCTTAAAACCAGCTGGTGCTAAGAAGATTTTGAAAATGTGAATATTAGTTTCCCTTGCTCATATCATTGTGTCATTGCTTCTTTTTGCTCGAGGGGGATTGAGGGAAGGAAATTGTTTGAAACACTATATTAGTACAACTGTTTTTTTTTTTAAAAAAAAAAAAAAGATTAATACTGCCATCAAAGAGTTATGATGCTAGGTTATTGTGACAGCCCAAACCCACTCCACTGCCAACAAATATTGTTCTCTTTGGGCTTCCCTTCAAGGTTTTTACCACGCGTCTGCTAGGGAGAGATTTTCATACCTCTATAAAGAATGTTTCATTCTCCTCTCCAACCGATGTGAGATCTCATAATCCACCCTCCTTTTAGGGCTCAGTGTCTTTGCTGACACACCACCTCATGTCCACCCCCTTTGGGGTTCAACCTCCTTGTTGGCACATCGTCTGGTGTTTGGCTTTGATACAATTTGTAACAGGTTAAGTCCACCCTTAGCAGATATTGTCCTCTTTGGGCCTCAAGCTGTTACAATGGTATCAAAGCCAGACACTGGGCGATGTGCTAGCGAGGAGACTGAACAACCCCCAAGAGGGTCATTAAATCATTTTTGTGTAGTCAAGTTTCATGATTTCTCGAGTCATTTCCTTGATAGTGCTGAAGCTTCTGTTTACAAGGGGGCTGTTTATCTACTTCTTTGTTGGTTCAAATGCTCAAGTGATCGAGTATAGATTCATGAGTTCATTATTGATTGTTAACTATCTCTTCATATGTGCACTTCTCATTAAGTACTGACAATGCCTTACATTCAATAAACTTAGTTTTTGCGGTTGATTGTTGCAACAGATTTGTGAATTGGATCCTAGCTTTTATCGAGATTGTAATCCTTTAATGAGCGAACTGCAAGGCAAATTTGAAGTTCTCTCTTTCTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATACGACGATGACGATTTTGAGAATGTGGAGCTGCCACCCCGACACGTCAAGGAATCAGAATCAGCTATTCCTCAGCTAAGTGAGGCTTTACAAAAACAGGCAATCTCTGTTGATGGCGGGAATACCCAAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGTCGTGGGGGATGCTATTCAGTTTAGAGAGCATCACAAGAGTGAATGGCATAAGCATAACATCAAGCGCAAAACCAAAAATCTCCCTCCTTTAACCGAAGAAGAGTGCATGGTAGAAATAGCTATAGGCGACTCTGAGTCCGACCTGAAGGAGTACTCATTTTGA TTATAAGCTCGAGGGGCGAAGCTTCGTCCAAAATCAGTATTATCATCGGCTTCTCCATTCTTATTCCAATCGGCAAAGTTTGCGAAGGCGTTTGAGCGAAGATGTCACGATCGCTGGTGCAGCCGATCGGGCAGAAGAGGCTGACGAACGTGGCGGTTGTTCGTTTGAAGAGACACGGTCTGCGCTTTGAGATCGCTTGTTACAAGAACAAGGTCCTTTCTTGGCGCTCTGGCGTGGAGAAAGATTTAGATGAGGTCTTGCAATCGCAAATTGTTTATTCAAATGTTTCGAAAGGAGTTCTTGCAAAAACCAAAGATTTAAAAGCAGCTTTTGATACAGATGATCAGGCGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAATTGCAGGGAAGGAGAGGGAGGCTCAATTATCTAATCAGTTTCGTGATATTGCAACCATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACGATTAGTATGATTGAGCGACTCATGCGCGAAATTCATTTTGCTGTTGATCCAAATCACAGCTCAAAGAAACAGGCATTAGAGGTCATTCATGAGCTTCAGAAACAGTTCCCAATTAAACGTTCGCCTATGAGAATACGATATACTGTACCTGAACAGAACTTTCCATCTCTCCTTGATAAGTTGAATTCCTGGAGTGCTAGTATCATTTCCAATGATCAGTCTGGAAATCAGCAACGAAGTGTTATTTGTGAATTGGATCCTAGCTTTTATCGAGATTGTAATCCTTTAATGAGCGAACTGCAAGGCAAATTTGAAGTTCTCTCTTTCTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATACGACGATGACGATTTTGAGAATGTGGAGCTGCCACCCCGACACGTCAAGGAATCAGAATCAGCTATTCCTCAGCTAAGTGAGGCTTTACAAAAACAGGCAATCTCTGTTGATGGCGGGAATACCCAAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGTCGTGGGGGATGCTATTCAGTTTAGAGAGCATCACAAGAGTGAATGGCATAAGCATAACATCAAGCGCAAAACCAAAAATCTCCCTCCTTTAACCGAAGAAGAGTGCATGGTAGAAATAGCTATAGGCGACTCTGAGTCCGACCTGAAGGAGTACTCATTTTGA ATGTCACGATCGCTGGTGCAGCCGATCGGGCAGAAGAGGCTGACGAACGTGGCGGTTGTTCGTTTGAAGAGACACGGTCTGCGCTTTGAGATCGCTTGTTACAAGAACAAGGTCCTTTCTTGGCGCTCTGGCGTGGAGAAAGATTTAGATGAGGTCTTGCAATCGCAAATTGTTTATTCAAATGTTTCGAAAGGAGTTCTTGCAAAAACCAAAGATTTAAAAGCAGCTTTTGATACAGATGATCAGGCGGAAATTTGTTTGAAGATTCTTAAAGAAGGGGAACTTCAAATTGCAGGGAAGGAGAGGGAGGCTCAATTATCTAATCAGTTTCGTGATATTGCAACCATTGTTATGCAGAAGACCTTCAATCCTGAAACTAAACGCCCTTACACGATTAGTATGATTGAGCGACTCATGCGCGAAATTCATTTTGCTGTTGATCCAAATCACAGCTCAAAGAAACAGGCATTAGAGGTCATTCATGAGCTTCAGAAACAGTTCCCAATTAAACGTTCGCCTATGAGAATACGATATACTGTACCTGAACAGAACTTTCCATCTCTCCTTGATAAGTTGAATTCCTGGAGTGCTAGTATCATTTCCAATGATCAGTCTGGAAATCAGCAACGAAGTGTTATTTGTGAATTGGATCCTAGCTTTTATCGAGATTGTAATCCTTTAATGAGCGAACTGCAAGGCAAATTTGAAGTTCTCTCTTTCTGTTTGCACGAGGAAGGGGACACCAATGTGGATCAATACGACGATGACGATTTTGAGAATGTGGAGCTGCCACCCCGACACGTCAAGGAATCAGAATCAGCTATTCCTCAGCTAAGTGAGGCTTTACAAAAACAGGCAATCTCTGTTGATGGCGGGAATACCCAAAAGGAAGGAAAACGCTGCAGCACATGCAACGTAGTCGTGGGGGATGCTATTCAGTTTAGAGAGCATCACAAGAGTGAATGGCATAAGCATAACATCAAGCGCAAAACCAAAAATCTCCCTCCTTTAACCGAAGAAGAGTGCATGGTAGAAATAGCTATAGGCGACTCTGAGTCCGACCTGAAGGAGTACTCATTTTGA MSRSLVQPIGQKRLTNVAVVRLKRHGLRFEIACYKNKVLSWRSGVEKDLDEVLQSQIVYSNVSKGVLAKTKDLKAAFDTDDQAEICLKILKEGELQIAGKEREAQLSNQFRDIATIVMQKTFNPETKRPYTISMIERLMREIHFAVDPNHSSKKQALEVIHELQKQFPIKRSPMRIRYTVPEQNFPSLLDKLNSWSASIISNDQSGNQQRSVICELDPSFYRDCNPLMSELQGKFEVLSFCLHEEGDTNVDQYDDDDFENVELPPRHVKESESAIPQLSEALQKQAISVDGGNTQKEGKRCSTCNVVVGDAIQFREHHKSEWHKHNIKRKTKNLPPLTEEECMVEIAIGDSESDLKEYSF Homology
BLAST of CmaCh09G010690 vs. ExPASy Swiss-Prot
Match: P70122 (Ribosome maturation protein SBDS OS=Mus musculus OX=10090 GN=Sbds PE=1 SV=4) HSP 1 Score: 251.5 bits (641), Expect = 1.4e-65 Identity = 133/247 (53.85%), Postives = 175/247 (70.85%), Query Frame = 0
BLAST of CmaCh09G010690 vs. ExPASy Swiss-Prot
Match: Q5RK30 (Ribosome maturation protein SBDS OS=Rattus norvegicus OX=10116 GN=Sbds PE=2 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 1.4e-65 Identity = 133/247 (53.85%), Postives = 175/247 (70.85%), Query Frame = 0
BLAST of CmaCh09G010690 vs. ExPASy Swiss-Prot
Match: Q3SWZ6 (Ribosome maturation protein SBDS OS=Bos taurus OX=9913 GN=SBDS PE=2 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 4.1e-65 Identity = 133/247 (53.85%), Postives = 174/247 (70.45%), Query Frame = 0
BLAST of CmaCh09G010690 vs. ExPASy Swiss-Prot
Match: Q9Y3A5 (Ribosome maturation protein SBDS OS=Homo sapiens OX=9606 GN=SBDS PE=1 SV=4) HSP 1 Score: 245.7 bits (626), Expect = 7.8e-64 Identity = 131/247 (53.04%), Postives = 173/247 (70.04%), Query Frame = 0
BLAST of CmaCh09G010690 vs. ExPASy Swiss-Prot
Match: Q5RAZ2 (Ribosome maturation protein SBDS OS=Pongo abelii OX=9601 GN=SBDS PE=2 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 7.8e-64 Identity = 131/247 (53.04%), Postives = 173/247 (70.04%), Query Frame = 0
BLAST of CmaCh09G010690 vs. ExPASy TrEMBL
Match: A0A6J1IK36 (ribosome maturation protein SBDS OS=Cucurbita maxima OX=3661 GN=LOC111474460 PE=3 SV=1) HSP 1 Score: 718.4 bits (1853), Expect = 1.5e-203 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
BLAST of CmaCh09G010690 vs. ExPASy TrEMBL
Match: A0A6J1F6G6 (ribosome maturation protein SBDS OS=Cucurbita moschata OX=3662 GN=LOC111442780 PE=3 SV=1) HSP 1 Score: 714.1 bits (1842), Expect = 2.8e-202 Identity = 357/360 (99.17%), Postives = 359/360 (99.72%), Query Frame = 0
BLAST of CmaCh09G010690 vs. ExPASy TrEMBL
Match: A0A5A7UXA4 (Ribosome maturation protein SBDS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00400 PE=3 SV=1) HSP 1 Score: 658.7 bits (1698), Expect = 1.4e-185 Identity = 326/360 (90.56%), Postives = 344/360 (95.56%), Query Frame = 0
BLAST of CmaCh09G010690 vs. ExPASy TrEMBL
Match: A0A1S3CRW0 (ribosome maturation protein SBDS OS=Cucumis melo OX=3656 GN=LOC103504043 PE=3 SV=1) HSP 1 Score: 658.7 bits (1698), Expect = 1.4e-185 Identity = 326/360 (90.56%), Postives = 344/360 (95.56%), Query Frame = 0
BLAST of CmaCh09G010690 vs. ExPASy TrEMBL
Match: A0A6J1DHK8 (ribosome maturation protein SBDS OS=Momordica charantia OX=3673 GN=LOC111021162 PE=3 SV=1) HSP 1 Score: 654.8 bits (1688), Expect = 2.0e-184 Identity = 328/360 (91.11%), Postives = 343/360 (95.28%), Query Frame = 0
BLAST of CmaCh09G010690 vs. NCBI nr
Match: XP_022975304.1 (ribosome maturation protein SBDS [Cucurbita maxima]) HSP 1 Score: 718.4 bits (1853), Expect = 3.1e-203 Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0
BLAST of CmaCh09G010690 vs. NCBI nr
Match: XP_022936066.1 (ribosome maturation protein SBDS [Cucurbita moschata] >KAG7025021.1 Ribosome maturation protein SBDS, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 714.1 bits (1842), Expect = 5.9e-202 Identity = 357/360 (99.17%), Postives = 359/360 (99.72%), Query Frame = 0
BLAST of CmaCh09G010690 vs. NCBI nr
Match: KAG6592159.1 (Ribosome maturation protein SBDS, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 712.6 bits (1838), Expect = 1.7e-201 Identity = 356/360 (98.89%), Postives = 359/360 (99.72%), Query Frame = 0
BLAST of CmaCh09G010690 vs. NCBI nr
Match: XP_023535044.1 (ribosome maturation protein SBDS [Cucurbita pepo subsp. pepo]) HSP 1 Score: 710.3 bits (1832), Expect = 8.5e-201 Identity = 354/360 (98.33%), Postives = 358/360 (99.44%), Query Frame = 0
BLAST of CmaCh09G010690 vs. NCBI nr
Match: XP_038886377.1 (ribosome maturation protein SBDS [Benincasa hispida]) HSP 1 Score: 678.3 bits (1749), Expect = 3.6e-191 Identity = 338/360 (93.89%), Postives = 349/360 (96.94%), Query Frame = 0
BLAST of CmaCh09G010690 vs. TAIR 10
Match: AT1G43860.1 (sequence-specific DNA binding transcription factors ) HSP 1 Score: 466.1 bits (1198), Expect = 2.6e-131 Identity = 231/371 (62.26%), Postives = 291/371 (78.44%), Query Frame = 0
BLAST of CmaCh09G010690 vs. TAIR 10
Match: AT2G24500.1 (Zinc finger protein 622 ) HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04 Identity = 18/42 (42.86%), Postives = 28/42 (66.67%), Query Frame = 0
BLAST of CmaCh09G010690 vs. TAIR 10
Match: AT4G31420.1 (Zinc finger protein 622 ) HSP 1 Score: 44.7 bits (104), Expect = 1.9e-04 Identity = 17/42 (40.48%), Postives = 27/42 (64.29%), Query Frame = 0
BLAST of CmaCh09G010690 vs. TAIR 10
Match: AT4G31420.2 (Zinc finger protein 622 ) HSP 1 Score: 44.7 bits (104), Expect = 1.9e-04 Identity = 17/42 (40.48%), Postives = 27/42 (64.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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