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CmaCh09G010540 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.TACAAAACTAGTTGGCAATTTCCTTACATTACTCACCATGTCTCCTTCCATGCCCTCTCAAAACCCTCACATTTCATCACTAAATCCACCATCTCCATCATGTTTCTTTCTTTCAACCTTAGATTCGTTTTGTTCTTCACCGTCATTGTTGCTCTCGTCTTCGTTTCGTCGGAGGCGGCGAGAGTGCCGAGAGCGTATTGGGAGCAGATGTTGCCTAAGAAGTTGCCATCTCCGTCCTCGGCCCCGTCGAAAGGGTCGAACTCTGTTGATCCTTCTTCGTCTTCTAAAGTTGTGAATGGTGATGGGAATTTGACTATGAAGGATGGAAACGTTTAGGTCTCGGGTTGCATCAATGCTTGACAAATTATTCAATGAGGCTGTTGCAACGTGAGAGCTTGCTTTTCGTAATCATTAGTCCAAATCCACCACCTTCATCCATTCATGTCACTTTCTTTCGAGCTTTGATTCGTTTTGTTCTTGACGGTTGTTTTCACTCTCACCTCCGTTTTGTTGGAGGTGGTGAGAATGTCAAGAGTGTATTGGGAGTAGACGTTGCCTAAGAAGTTGCCATTTTCGTCCTCGGCGCCGTGGAAAGGGTCGAACTCTATTGATCCTTCCTCTTCTATAGCTGTGAATGTTGATGGGATTTTGACTATGAAAGATGGAAACGTTTAG TACAAAACTAGTTGGCAATTTCCTTACATTACTCACCATGTCTCCTTCCATGCCCTCTCAAAACCCTCACATTTCATCACTAAATCCACCATCTCCATCATGTTTCTTTCTTTCAACCTTAGATTCGTTTTGTTCTTCACCGTCATTGTTGCTCTCGTCTTCGTTTCGTCGGAGGCGGCGAGAGTGCCGAGAGCGTATTGGGAGCAGATGTTGCCTAAGAAGTTGCCATCTCCGTCCTCGGCCCCGTCGAAAGGGTCGAACTCTGTTGATCCTTCTTCGTCTTCTAAAGTTGTGAATGGTGATGGGAATTTGACTATGAAGGATGGAAACACGTTGCCTAAGAAGTTGCCATTTTCGTCCTCGGCGCCGTGGAAAGGGTCGAACTCTATTGATCCTTCCTCTTCTATAGCTGTGAATGTTGATGGGATTTTGACTATGAAAGATGGAAACGTTTAG TACAAAACTAGTTGGCAATTTCCTTACATTACTCACCATGTCTCCTTCCATGCCCTCTCAAAACCCTCACATTTCATCACTAAATCCACCATCTCCATCATGTTTCTTTCTTTCAACCTTAGATTCGTTTTGTTCTTCACCGTCATTGTTGCTCTCGTCTTCGTTTCGTCGGAGGCGGCGAGAGTGCCGAGAGCGTATTGGGAGCAGATGTTGCCTAAGAAGTTGCCATCTCCGTCCTCGGCCCCGTCGAAAGGGTCGAACTCTGTTGATCCTTCTTCGTCTTCTAAAGTTGTGAATGGTGATGGGAATTTGACTATGAAGGATGGAAACACGTTGCCTAAGAAGTTGCCATTTTCGTCCTCGGCGCCGTGGAAAGGGTCGAACTCTATTGATCCTTCCTCTTCTATAGCTGTGAATGTTGATGGGATTTTGACTATGAAAGATGGAAACGTTTAG YKTSWQFPYITHHVSFHALSKPSHFITKSTISIMFLSFNLRFVLFFTVIVALVFVSSEAARVPRAYWEQMLPKKLPSPSSAPSKGSNSVDPSSSSKVVNGDGNLTMKDGNTLPKKLPFSSSAPWKGSNSIDPSSSIAVNVDGILTMKDGNV Homology
BLAST of CmaCh09G010540 vs. ExPASy TrEMBL
Match: A0A5D3DI56 (Glutamate-gated kainate-type ion channel receptor subunit GluR5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G003180 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.5e-16 Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 0
BLAST of CmaCh09G010540 vs. ExPASy TrEMBL
Match: A0A2P5E7J5 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_227110 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 1.0e-12 Identity = 58/118 (49.15%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of CmaCh09G010540 vs. ExPASy TrEMBL
Match: W9S9P5 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_012616 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 7.4e-11 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 0
BLAST of CmaCh09G010540 vs. ExPASy TrEMBL
Match: A0A7J6GWN4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_008835 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 3.1e-09 Identity = 46/109 (42.20%), Postives = 72/109 (66.06%), Query Frame = 0
BLAST of CmaCh09G010540 vs. ExPASy TrEMBL
Match: A0A803PR73 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 4.1e-09 Identity = 46/106 (43.40%), Postives = 71/106 (66.98%), Query Frame = 0
BLAST of CmaCh09G010540 vs. NCBI nr
Match: TYK23265.1 (glutamate-gated kainate-type ion channel receptor subunit GluR5 [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 3.2e-16 Identity = 53/77 (68.83%), Postives = 63/77 (81.82%), Query Frame = 0
BLAST of CmaCh09G010540 vs. NCBI nr
Match: KAE8646070.1 (hypothetical protein Csa_015561 [Cucumis sativus]) HSP 1 Score: 95.5 bits (236), Expect = 4.1e-16 Identity = 52/77 (67.53%), Postives = 63/77 (81.82%), Query Frame = 0
BLAST of CmaCh09G010540 vs. NCBI nr
Match: KAG6607702.1 (hypothetical protein SDJN03_01044, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 85.5 bits (210), Expect = 4.3e-13 Identity = 56/97 (57.73%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of CmaCh09G010540 vs. NCBI nr
Match: PON81519.1 (hypothetical protein TorRG33x02_227110, partial [Trema orientale]) HSP 1 Score: 83.2 bits (204), Expect = 2.1e-12 Identity = 58/118 (49.15%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of CmaCh09G010540 vs. NCBI nr
Match: EXC32449.1 (hypothetical protein L484_012616 [Morus notabilis]) HSP 1 Score: 77.0 bits (188), Expect = 1.5e-10 Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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