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CmaCh09G009520 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAACTGTTTGCGGCGGGATGGCGCGGCGGCGCAGTGGGCCGGTGAGGAGTGGGACTTACTCGCGGCGGAGGACGACGGCCGGGAAGGGCTTCTCGGCGAAAACGAGAAGAAAAAGAGTTCAACGACGGCGACAGAGGTGAAGATTAAGATCACGAAGAGACAGCTGGAGGAGCTTTTGGGGAAAGTGGATATTAAGGAGATGTCCGTACAGCAGGTTCTGGCTCAGTTGATCGGCGTCGGCGATCAGTTTCACGAATCTCGCCACCGTCACTGGCGGCCGGTGTTGCAGAGTATACCGGAAGTTGATTGA ATGGGCAACTGTTTGCGGCGGGATGGCGCGGCGGCGCAGTGGGCCGGTGAGGAGTGGGACTTACTCGCGGCGGAGGACGACGGCCGGGAAGGGCTTCTCGGCGAAAACGAGAAGAAAAAGAGTTCAACGACGGCGACAGAGGTGAAGATTAAGATCACGAAGAGACAGCTGGAGGAGCTTTTGGGGAAAGTGGATATTAAGGAGATGTCCGTACAGCAGGTTCTGGCTCAGTTGATCGGCGTCGGCGATCAGTTTCACGAATCTCGCCACCGTCACTGGCGGCCGGTGTTGCAGAGTATACCGGAAGTTGATTGA ATGGGCAACTGTTTGCGGCGGGATGGCGCGGCGGCGCAGTGGGCCGGTGAGGAGTGGGACTTACTCGCGGCGGAGGACGACGGCCGGGAAGGGCTTCTCGGCGAAAACGAGAAGAAAAAGAGTTCAACGACGGCGACAGAGGTGAAGATTAAGATCACGAAGAGACAGCTGGAGGAGCTTTTGGGGAAAGTGGATATTAAGGAGATGTCCGTACAGCAGGTTCTGGCTCAGTTGATCGGCGTCGGCGATCAGTTTCACGAATCTCGCCACCGTCACTGGCGGCCGGTGTTGCAGAGTATACCGGAAGTTGATTGA MGNCLRRDGAAAQWAGEEWDLLAAEDDGREGLLGENEKKKSSTTATEVKIKITKRQLEELLGKVDIKEMSVQQVLAQLIGVGDQFHESRHRHWRPVLQSIPEVD Homology
BLAST of CmaCh09G009520 vs. ExPASy TrEMBL
Match: A0A6J1IHJ3 (uncharacterized protein LOC111475920 OS=Cucurbita maxima OX=3661 GN=LOC111475920 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.5e-50 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CmaCh09G009520 vs. ExPASy TrEMBL
Match: A0A6J1FD17 (uncharacterized protein LOC111442898 OS=Cucurbita moschata OX=3662 GN=LOC111442898 PE=4 SV=1) HSP 1 Score: 201.4 bits (511), Expect = 1.8e-48 Identity = 101/104 (97.12%), Postives = 101/104 (97.12%), Query Frame = 0
BLAST of CmaCh09G009520 vs. ExPASy TrEMBL
Match: A0A6J1CG88 (uncharacterized protein LOC111010526 OS=Momordica charantia OX=3673 GN=LOC111010526 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.9e-30 Identity = 73/104 (70.19%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of CmaCh09G009520 vs. ExPASy TrEMBL
Match: A0A5D2L6Y6 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D05G434100v1 PE=4 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 7.6e-23 Identity = 65/120 (54.17%), Postives = 83/120 (69.17%), Query Frame = 0
BLAST of CmaCh09G009520 vs. ExPASy TrEMBL
Match: A0A5D2QUV4 (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_A04G022400v1 PE=4 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.3e-22 Identity = 64/120 (53.33%), Postives = 84/120 (70.00%), Query Frame = 0
BLAST of CmaCh09G009520 vs. NCBI nr
Match: XP_022975730.1 (uncharacterized protein LOC111475920 [Cucurbita maxima]) HSP 1 Score: 208.4 bits (529), Expect = 3.0e-50 Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 0
BLAST of CmaCh09G009520 vs. NCBI nr
Match: XP_022936225.1 (uncharacterized protein LOC111442898 [Cucurbita moschata] >KAG6592042.1 hypothetical protein SDJN03_14388, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024918.1 hypothetical protein SDJN02_13738, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 201.4 bits (511), Expect = 3.7e-48 Identity = 101/104 (97.12%), Postives = 101/104 (97.12%), Query Frame = 0
BLAST of CmaCh09G009520 vs. NCBI nr
Match: XP_023536165.1 (uncharacterized protein LOC111797410 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 198.0 bits (502), Expect = 4.1e-47 Identity = 99/104 (95.19%), Postives = 100/104 (96.15%), Query Frame = 0
BLAST of CmaCh09G009520 vs. NCBI nr
Match: XP_038896531.1 (uncharacterized protein LOC120084782 [Benincasa hispida]) HSP 1 Score: 171.0 bits (432), Expect = 5.3e-39 Identity = 90/110 (81.82%), Postives = 95/110 (86.36%), Query Frame = 0
BLAST of CmaCh09G009520 vs. NCBI nr
Match: XP_022139678.1 (uncharacterized protein LOC111010526 [Momordica charantia]) HSP 1 Score: 141.0 bits (354), Expect = 5.9e-30 Identity = 73/104 (70.19%), Postives = 79/104 (75.96%), Query Frame = 0
BLAST of CmaCh09G009520 vs. TAIR 10
Match: AT3G20340.1 (Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress. ) HSP 1 Score: 73.6 bits (179), Expect = 1.1e-13 Identity = 45/118 (38.14%), Postives = 69/118 (58.47%), Query Frame = 0
BLAST of CmaCh09G009520 vs. TAIR 10
Match: AT4G21920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20340.1); Has 40 Blast hits to 40 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 4.3e-10 Identity = 42/129 (32.56%), Postives = 71/129 (55.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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