CmaCh09G009290 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G009290
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein NDR1-like
Location	Cma_Chr09: 4642694 .. 4643296 (-)
RNA-Seq Expression	CmaCh09G009290
Synteny	CmaCh09G009290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGAATCCGGCGGCTGCTGCCGGTGTTGTTTCAGCTTCATCTTAACTTCCGGCTTCGCTGCTCTGTTCTTATGGCTCAGCCTTCGAACCCGCAAACCCAAATGCTCGATCGAATCTTTTTACATTCCAGCCTTAAATCAATCCCTAAATTCGCCCTTAAATTCCACCGTCTCCTTCGATCTGCGCCTCAAAAACCAGAACAAAGACAAATCAGTCTTCTACGACTCTCTCAATCTCAACCTCACTCTCGTCGGAGGGCGGCCGCTGGGCAACGTGACAGTGCCCGGATTCCACCAGGGCCGTGGCAAGAAGGCGTTCAGAAACGAGACCATCGAAGCCCGTGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGATTTTCCGGCTGGATTTGGCGACGGCGGTCCGGTTCAAGATCTTGTTCTGGAATACCAAGAGGGAGAATTTGAGAGTCGGAGCAGAGTTCAAAGTCAACAAGCAGGGAGCGACGGAATACCCAGGGATCACGCTTAGCTCCGGCGCCGCCGTGCCCGACGGCTCGCCGGTGACAGTTATCTGGAGTTCTTGGGTGTTTGTCTTGTGGAAACTTTTCTGA

mRNA sequence

ATGACGGAATCCGGCGGCTGCTGCCGGTGTTGTTTCAGCTTCATCTTAACTTCCGGCTTCGCTGCTCTGTTCTTATGGCTCAGCCTTCGAACCCGCAAACCCAAATGCTCGATCGAATCTTTTTACATTCCAGCCTTAAATCAATCCCTAAATTCGCCCTTAAATTCCACCGTCTCCTTCGATCTGCGCCTCAAAAACCAGAACAAAGACAAATCAGTCTTCTACGACTCTCTCAATCTCAACCTCACTCTCGTCGGAGGGCGGCCGCTGGGCAACGTGACAGTGCCCGGATTCCACCAGGGCCGTGGCAAGAAGGCGTTCAGAAACGAGACCATCGAAGCCCGTGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGATTTTCCGGCTGGATTTGGCGACGGCGGTCCGGTTCAAGATCTTGTTCTGGAATACCAAGAGGGAGAATTTGAGAGTCGGAGCAGAGTTCAAAGTCAACAAGCAGGGAGCGACGGAATACCCAGGGATCACGCTTAGCTCCGGCGCCGCCGTGCCCGACGGCTCGCCGGTGACAGTTATCTGGAGTTCTTGGGTGTTTGTCTTGTGGAAACTTTTCTGA

Coding sequence (CDS)

ATGACGGAATCCGGCGGCTGCTGCCGGTGTTGTTTCAGCTTCATCTTAACTTCCGGCTTCGCTGCTCTGTTCTTATGGCTCAGCCTTCGAACCCGCAAACCCAAATGCTCGATCGAATCTTTTTACATTCCAGCCTTAAATCAATCCCTAAATTCGCCCTTAAATTCCACCGTCTCCTTCGATCTGCGCCTCAAAAACCAGAACAAAGACAAATCAGTCTTCTACGACTCTCTCAATCTCAACCTCACTCTCGTCGGAGGGCGGCCGCTGGGCAACGTGACAGTGCCCGGATTCCACCAGGGCCGTGGCAAGAAGGCGTTCAGAAACGAGACCATCGAAGCCCGTGGAGTGGATTGGAAGGCGGTTTCCCGGAATGGGTCGGCGATTTTCCGGCTGGATTTGGCGACGGCGGTCCGGTTCAAGATCTTGTTCTGGAATACCAAGAGGGAGAATTTGAGAGTCGGAGCAGAGTTCAAAGTCAACAAGCAGGGAGCGACGGAATACCCAGGGATCACGCTTAGCTCCGGCGCCGCCGTGCCCGACGGCTCGCCGGTGACAGTTATCTGGAGTTCTTGGGTGTTTGTCTTGTGGAAACTTTTCTGA

Protein sequence

MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSFDLRLKNQNKDKSVFYDSLNLNLTLVGGRPLGNVTVPGFHQGRGKKAFRNETIEARGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVPDGSPVTVIWSSWVFVLWKLF

Homology

[Close]

BLAST of CmaCh09G009290 vs. ExPASy Swiss-Prot
Match: O48915 (Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.7e-39
Identity = 94/214 (43.93%), Postives = 127/214 (59.35%), Query Frame = 0


Query: 2   TESG-GCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 61
           TE G  CC CC SFI T+G  +LFLWLSLR  KPKCSI++F+IPAL +  NS  N+T++F
Sbjct: 8   TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNF 67

Query: 62  DLRLKNQNKDKSVFYDSLNLNLTLVGGRPL--------GNVTVPGFHQGRGKKA------ 121
            +R  N NKDK ++YD ++LN + +    +        GN TVP F+QG  KKA      
Sbjct: 68  MVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQV 127

Query: 122 --FRNETIEARGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQG 181
               N+T+       +AV  NGSA+FRLDL T VRFKI+FW TKR  + VGA+ +VN  G
Sbjct: 128 KPLNNQTV------LRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDG 187

Query: 182 A-TEYPGITL---SSGAAVPDGSPVTVIWSSWVF 195
              +  GI +    S   +    P++V+ +  VF
Sbjct: 188 VKAQKKGIKMKKSDSSFPLRSSFPISVLMNLLVF 215

[Close]

BLAST of CmaCh09G009290 vs. ExPASy TrEMBL
Match: A0A6J1IH99 (protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 1.4e-110
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60
           MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGGRPLGNVTVPGFHQGRGKKAFRNETIEARGVDWK 120
           DLRLKNQNKDKSVFYDSLNLNLTLVGGRPLGNVTVPGFHQGRGKKAFRNETIEARGVDWK
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGGRPLGNVTVPGFHQGRGKKAFRNETIEARGVDWK 120

Query: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVP 180
           AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVP
Sbjct: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVP 180

Query: 181 DGSPVTVIWSSWVFVLWKLF 201
           DGSPVTVIWSSWVFVLWKLF
Sbjct: 181 DGSPVTVIWSSWVFVLWKLF 200

[Close]

BLAST of CmaCh09G009290 vs. ExPASy TrEMBL
Match: A0A6J1F5U5 (protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGG------RPLGNVTVPGFHQGRGKKAFRNETIEA 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG       RPLGNVTVPGFHQGRGKKAFRNETIE 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN+QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVTVIWSSWVFVLWKLF 201
           SG AVPDGSPV VIWS WVFVLWKLF
Sbjct: 181 SGVAVPDGSPVRVIWSFWVFVLWKLF 206

[Close]

BLAST of CmaCh09G009290 vs. ExPASy TrEMBL
Match: A0A6J1CEH8 (protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.1e-82
Identity = 159/203 (78.33%), Postives = 172/203 (84.73%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60
           MTE+GGC RCCFSFILTSGF ALFLWLSLRT KPKCSIESFYIPALNQSLNS  +STV F
Sbjct: 1   MTEAGGCGRCCFSFILTSGFTALFLWLSLRTHKPKCSIESFYIPALNQSLNSSSDSTVFF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGG--RPLGNVTVPGFHQGRGKKAFRNETIEARGVD 120
           DLRLKNQNKDKSVFYD++NLNLTLV G  RP+GN+TV GFHQGR KKAFR   +EARGVD
Sbjct: 61  DLRLKNQNKDKSVFYDAINLNLTLVDGGRRPVGNLTVAGFHQGRDKKAFRKGQVEARGVD 120

Query: 121 WKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYP-GITLSSGA 180
           WKAV RNGSA+FRLDLATAVR+KILFW TKR+NLRVGAE KVN QGA EYP GITLSSGA
Sbjct: 121 WKAVRRNGSAVFRLDLATAVRYKILFWKTKRDNLRVGAEVKVNAQGAKEYPHGITLSSGA 180

Query: 181 AVPDGSPVTVIWSSWVFVLWKLF 201
           AV   SP   +WS    +LWK +
Sbjct: 181 AVAGRSPAGALWSVGALILWKFW 203

[Close]

BLAST of CmaCh09G009290 vs. ExPASy TrEMBL
Match: A0A5A7TYN2 (Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G00260 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.2e-79
Identity = 153/202 (75.74%), Postives = 171/202 (84.65%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNS-TVS 60
           MTESG CC+CCF FI+T+GFAALFLWLSLRTRKPKCSIESFYIPALNQSLNS  NS T+ 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVFYDSLNLNLTLV--GGRPLGNVTVPGFHQGRGKKAFRNETIEARGV 120
           FDLRLKNQNKDKSV+YD++ LN TL+    RP+GN+TVPGFHQGR KKA R E++EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYP-GITLSSG 180
           DWKAVSRNGS I RLDLATAVR+KIL W TKRENLR+G E KVN QG  + P GITL+SG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVPDGSPVTVIWSSWVFVLWK 199
           AA+P G+ V VIWS WVFV WK
Sbjct: 181 AAMPGGTLVRVIWSFWVFVWWK 202

[Close]

BLAST of CmaCh09G009290 vs. ExPASy TrEMBL
Match: A0A1S3BZM3 (protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.2e-79
Identity = 153/202 (75.74%), Postives = 171/202 (84.65%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNS-TVS 60
           MTESG CC+CCF FI+T+GFAALFLWLSLRTRKPKCSIESFYIPALNQSLNS  NS T+ 
Sbjct: 1   MTESGWCCKCCFKFIITAGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSSSNSTTLY 60

Query: 61  FDLRLKNQNKDKSVFYDSLNLNLTLV--GGRPLGNVTVPGFHQGRGKKAFRNETIEARGV 120
           FDLRLKNQNKDKSV+YD++ LN TL+    RP+GN+TVPGFHQGR KKA R E++EARGV
Sbjct: 61  FDLRLKNQNKDKSVYYDTIYLNFTLLDEARRPVGNLTVPGFHQGRDKKALRKESVEARGV 120

Query: 121 DWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYP-GITLSSG 180
           DWKAVSRNGS I RLDLATAVR+KIL W TKRENLR+G E KVN QG  + P GITL+SG
Sbjct: 121 DWKAVSRNGSTIVRLDLATAVRYKILLWKTKRENLRLGTEIKVNGQGLKDNPHGITLNSG 180

Query: 181 AAVPDGSPVTVIWSSWVFVLWK 199
           AA+P G+ V VIWS WVFV WK
Sbjct: 181 AAMPGGTLVRVIWSFWVFVWWK 202

[Close]

BLAST of CmaCh09G009290 vs. NCBI nr
Match: XP_022976581.1 (protein NDR1-like [Cucurbita maxima])

HSP 1 Score: 408.7 bits (1049), Expect = 2.9e-110
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60
           MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGGRPLGNVTVPGFHQGRGKKAFRNETIEARGVDWK 120
           DLRLKNQNKDKSVFYDSLNLNLTLVGGRPLGNVTVPGFHQGRGKKAFRNETIEARGVDWK
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGGRPLGNVTVPGFHQGRGKKAFRNETIEARGVDWK 120

Query: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVP 180
           AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVP
Sbjct: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVP 180

Query: 181 DGSPVTVIWSSWVFVLWKLF 201
           DGSPVTVIWSSWVFVLWKLF
Sbjct: 181 DGSPVTVIWSSWVFVLWKLF 200

[Close]

BLAST of CmaCh09G009290 vs. NCBI nr
Match: XP_023535135.1 (protein NDR1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.0 bits (1003), Expect = 6.3e-105
Identity = 193/200 (96.50%), Postives = 193/200 (96.50%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60
           MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGGRPLGNVTVPGFHQGRGKKAFRNETIEARGVDWK 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG RPLGNVTVPGFHQGRGKKAFRNETIE RGVDWK
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGRRPLGNVTVPGFHQGRGKKAFRNETIETRGVDWK 120

Query: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVP 180
           AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVN QGATEYPGITLSSGAAV 
Sbjct: 121 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNGQGATEYPGITLSSGAAVL 180

Query: 181 DGSPVTVIWSSWVFVLWKLF 201
           DGSPV VIWS WVFVLWKLF
Sbjct: 181 DGSPVRVIWSFWVFVLWKLF 200

[Close]

BLAST of CmaCh09G009290 vs. NCBI nr
Match: KAG7024897.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 386.7 bits (992), Expect = 1.2e-103
Identity = 191/206 (92.72%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGG------RPLGNVTVPGFHQGRGKKAFRNETIEA 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG       RPLGNVTVPGFHQGRGKKAFRNETIE 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN+QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVTVIWSSWVFVLWKLF 201
           SGAAVPDGSPV VIWS WVFVLWKLF
Sbjct: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206

[Close]

BLAST of CmaCh09G009290 vs. NCBI nr
Match: XP_022935836.1 (protein NDR1-like [Cucurbita moschata])

HSP 1 Score: 385.2 bits (988), Expect = 3.5e-103
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGG------RPLGNVTVPGFHQGRGKKAFRNETIEA 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG       RPLGNVTVPGFHQGRGKKAFRNETIE 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNETIET 120

Query: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN+QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVTVIWSSWVFVLWKLF 201
           SG AVPDGSPV VIWS WVFVLWKLF
Sbjct: 181 SGVAVPDGSPVRVIWSFWVFVLWKLF 206

[Close]

BLAST of CmaCh09G009290 vs. NCBI nr
Match: KAG6592022.1 (Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 384.4 bits (986), Expect = 5.9e-103
Identity = 190/206 (92.23%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 1   MTESGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 60
           MTE GGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIE FYIPALNQSLNSPLNSTVSF
Sbjct: 1   MTEPGGCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIEHFYIPALNQSLNSPLNSTVSF 60

Query: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGG------RPLGNVTVPGFHQGRGKKAFRNETIEA 120
           DLRLKNQNKDKSVFYDSLNLNLTLVG       RPLGNVTVPGFHQGRGKKAFRNE IE 
Sbjct: 61  DLRLKNQNKDKSVFYDSLNLNLTLVGAAAGGSRRPLGNVTVPGFHQGRGKKAFRNEIIET 120

Query: 121 RGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLS 180
           RGVDWKAVSRNG+A+FRLDLATAVRFKILFWNTKRENLRVGAEFKVN+QGATEYPGITLS
Sbjct: 121 RGVDWKAVSRNGAAVFRLDLATAVRFKILFWNTKRENLRVGAEFKVNEQGATEYPGITLS 180

Query: 181 SGAAVPDGSPVTVIWSSWVFVLWKLF 201
           SGAAVPDGSPV VIWS WVFVLWKLF
Sbjct: 181 SGAAVPDGSPVRVIWSFWVFVLWKLF 206

[Close]

BLAST of CmaCh09G009290 vs. TAIR 10
Match: AT3G20600.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 162.9 bits (411), Expect = 2.6e-40
Identity = 94/214 (43.93%), Postives = 127/214 (59.35%), Query Frame = 0


Query: 2   TESG-GCCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSF 61
           TE G  CC CC SFI T+G  +LFLWLSLR  KPKCSI++F+IPAL +  NS  N+T++F
Sbjct: 8   TEGGRNCCTCCLSFIFTAGLTSLFLWLSLRADKPKCSIQNFFIPALGKDPNSRDNTTLNF 67

Query: 62  DLRLKNQNKDKSVFYDSLNLNLTLVGGRPL--------GNVTVPGFHQGRGKKA------ 121
            +R  N NKDK ++YD ++LN + +    +        GN TVP F+QG  KKA      
Sbjct: 68  MVRCDNPNKDKGIYYDDVHLNFSTINTTKINSSALVLVGNYTVPKFYQGHKKKAKKWGQV 127

Query: 122 --FRNETIEARGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQG 181
               N+T+       +AV  NGSA+FRLDL T VRFKI+FW TKR  + VGA+ +VN  G
Sbjct: 128 KPLNNQTV------LRAVLPNGSAVFRLDLKTQVRFKIVFWKTKRYGVEVGADVEVNGDG 187

Query: 182 A-TEYPGITL---SSGAAVPDGSPVTVIWSSWVF 195
              +  GI +    S   +    P++V+ +  VF
Sbjct: 188 VKAQKKGIKMKKSDSSFPLRSSFPISVLMNLLVF 215

[Close]

BLAST of CmaCh09G009290 vs. TAIR 10
Match: AT3G20590.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 145.6 bits (366), Expect = 4.3e-35
Identity = 80/175 (45.71%), Postives = 109/175 (62.29%), Query Frame = 0


Query: 7   CCRCCFSFILTSGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSFDLRLKN 66
           CC C F FI T+   AL LWLSLR +KPKCSI++FYIPAL+++L+S  N+T++F +R  N
Sbjct: 14  CCTCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDN 73

Query: 67  QNKDKSVFYDSLNLNLTLVGGRP--------LGNVTVPGFHQGRGKKA--------FRNE 126
            NKDK ++YD ++L  + +            + N TVP F+QG  KKA          N+
Sbjct: 74  PNKDKGIYYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFYQGHKKKAKKWGQVWPLNNQ 133

Query: 127 TIEARGVDWKAVSRNGSAIFRLDLATAVRFKILFWNTK-RENLRVGAEFKVNKQG 165
           T+       +AV  NGSA+FRLDL T VRFKI+FW TK    ++VGA+ +VN  G
Sbjct: 134 TV------LRAVLPNGSAVFRLDLKTHVRFKIVFWKTKWYRRIKVGADVEVNGDG 182

[Close]

BLAST of CmaCh09G009290 vs. TAIR 10
Match: AT3G20610.1 (non-race specific disease resistance protein, putative )

HSP 1 Score: 115.5 bits (288), Expect = 4.8e-26
Identity = 74/184 (40.22%), Postives = 103/184 (55.98%), Query Frame = 0


Query: 13  SFILTSGFAALFLWLS-LRTRKPKCSIESFYIPALNQSLNSPLNSTVSFDLRLKNQNKDK 72
           + +  S   AL LWLS L    P+CSI  FYIPALN+SL S  N+T++F +RLKN N  +
Sbjct: 19  TLLYVSFLLALCLWLSTLVHHIPRCSIHYFYIPALNKSLISSDNTTLNFMVRLKNINAKQ 78

Query: 73  SVFYDSLNLNL-TLVGGRPL--GNVTVPGFHQGRGKKA--------FRNETIEARGVDWK 132
            ++Y+ L+L+  T +    L   N TVP F+QG  KKA        F N+T+       +
Sbjct: 79  GIYYEDLHLSFSTRINNSSLLVANYTVPRFYQGHEKKAKKWGQALPFNNQTV------IQ 138

Query: 133 AVSRNGSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQGATEYPGITLSSGAAVP 185
           AV  NGSAIFR+DL   V++K++ W TKR  L+     +VN+ GAT+           + 
Sbjct: 139 AVLPNGSAIFRVDLKMQVKYKVMSWKTKRYKLKASVNLEVNEDGATKVKDKEDGIKMKIS 196

[Close]

BLAST of CmaCh09G009290 vs. TAIR 10
Match: AT4G05220.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 59.3 bits (142), Expect = 4.1e-09
Identity = 45/168 (26.79%), Postives = 74/168 (44.05%), Query Frame = 0


Query: 11  CFSFILT---SGFAALFLWLSLRTRKPKCSIESFYIPALNQSLNSPLNSTVSFDLRLKNQ 70
           C  F+L     G  A  LWLSLR  +P+  I+ F +  L+Q      N+ ++F++ + N 
Sbjct: 47  CAMFLLVLFFVGVIAFILWLSLRPHRPRFHIQDFVVQGLDQPTGVE-NARIAFNVTILNP 106

Query: 71  NKDKSVFYDSLNLNL----TLVGGRPLGNVTVPGFHQGRGKK----AFRNETIEARGVDW 130
           N+   V++DS+  ++      VG  PL N   P F Q              ++      W
Sbjct: 107 NQHMGVYFDSMEGSIYYKDQRVGLIPLLN---PFFQQPTNTTIVTGTLTGASLTVNSNRW 166

Query: 131 KAVSRN---GSAIFRLDLATAVRFKILFWNTKRENLRVGAEFKVNKQG 165
              S +   G+  FRLD+ + +RFK+  W +K   +       V + G
Sbjct: 167 TEFSNDRAQGTVGFRLDIVSTIRFKLHRWISKHHRMHANCNIVVGRDG 210

The following BLAST results are available for this feature:

BLAST of CmaCh09G009290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O48915	3.7e-39	43.93	Protein NDR1 OS=Arabidopsis thaliana OX=3702 GN=NDR1 PE=1 SV=1	[more]

BLAST of CmaCh09G009290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IH99	1.4e-110	100.00	protein NDR1-like OS=Cucurbita maxima OX=3661 GN=LOC111476935 PE=4 SV=1	[more]
A0A6J1F5U5	1.7e-103	92.23	protein NDR1-like OS=Cucurbita moschata OX=3662 GN=LOC111442624 PE=4 SV=1	[more]
A0A6J1CEH8	2.1e-82	78.33	protein NDR1-like OS=Momordica charantia OX=3673 GN=LOC111010486 PE=4 SV=1	[more]
A0A5A7TYN2	2.2e-79	75.74	Protein NDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1251G0...	[more]
A0A1S3BZM3	2.2e-79	75.74	protein NDR1-like OS=Cucumis melo OX=3656 GN=LOC103494933 PE=4 SV=1	[more]

BLAST of CmaCh09G009290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976581.1	2.9e-110	100.00	protein NDR1-like [Cucurbita maxima]	[more]
XP_023535135.1	6.3e-105	96.50	protein NDR1-like [Cucurbita pepo subsp. pepo]	[more]
KAG7024897.1	1.2e-103	92.72	Protein NDR1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022935836.1	3.5e-103	92.23	protein NDR1-like [Cucurbita moschata]	[more]
KAG6592022.1	5.9e-103	92.23	Protein NDR1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh09G009290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20600.1	2.6e-40	43.93	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20590.1	4.3e-35	45.71	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G20610.1	4.8e-26	40.22	non-race specific disease resistance protein, putative	[more]
AT4G05220.1	4.1e-09	26.79	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 62..149 e-value: 1.1E-5 score: 25.9
None	No IPR available	PANTHER	PTHR31415:SF52	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY-RELATED	coord: 1..178
IPR044839	Protein NDR1-like	PANTHER	PTHR31415	OS05G0367900 PROTEIN	coord: 1..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G009290.1	CmaCh09G009290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098542	defense response to other organism
cellular_component	GO:0016021	integral component of membrane