CmaCh09G009270 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G009270
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionGRAS family transcription factor family protein
LocationCma_Chr09: 4634222 .. 4641765 (-)
RNA-Seq ExpressionCmaCh09G009270
SyntenyCmaCh09G009270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTAATTTGACGTGGGTTCATCATGTTCATAGAAAAATTGTTCTAACTGATTCAATTTCTGGGCTTACAATTACAACAAGCTTAAACCCATAAATCCCCACAAGAATTTCAACGATTCAGCGCGGAGGGAAGTTTCCGGCCTGCGATTTTGTCAAAGAATAGTACTCTCCACGGCGCCCCATTGAAATCAGCTCATTGTGCGATCCTTGTTCCACAACTTTCCCGTTCTTGATCACGGCGATGGTGTTCGCTTTCTGAATCGTCGATAAGCGGTGGGCGACGATTATGCAGGTTCTGTTTATCATCATCTTCTCTAGGGCTTCCTGCACCAAATTCTCTGATACGCTGTCGAGCGCGCTTGTTGCCTCATCTAGCAGCAGGATTGATGGGTTCTTCAGGATCGCTCTTGCCAGTGCGATTCTTTGCTTTTGCCCGCCTGATAGCTGCGCTCCTCTCTCGCCACAGTATGTATTATACTCATCTTTCATTCCACTGTTAGATTAGAAATATTGAAAAGTTTAGTGTTGTTTATTGAAATCTCTTGTTTTGGTGGGTAACTCTTTGATTGACGGTTTTGTTAGGAATCATGACTCTCCACAATGGTATGGTTGGATTTTCTAAAAGGTCTCGTATCAATGGAGATACTATTCCTCACTTATGAACCCATGATCATTCCCTAAATTAGCCAATGTGTGCAACGGCCTAGACTCACTGCTAGCATATATTGTCCTCTTTGGGTTTTTCTTTCGGGCTTTTCCTCAAGGCTTTAAAATGTGTCTGCTAGGGGAAGGTTTTCACACCCTTATAAAGGGTGTTTTGTTCTCCTCCCCAATCAATGTGGGATTGTGAGAATCCCTCCCAATAATCCTCTTGTCGAACAAAGTACACTATAGAGCCTCCTCCGAGGCCTACGGAGCCCTCGAATAACCTCCGCTTAATCGAGGCTCAACTCCTTTCTCTGAAGTCTTCGAACAAAGTACACCCTTTGTTCGACACTAAAGTAACTTTTGACTACTTTTTCGAGCCTCACAACTTCTTTGTTTGACACTTAAGGACTATGTTGACATGGCTAAGTTTAGGGCATGACTCTGATACCATGTCAGGAATCACGACTCTTCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGTTTTGCTTTGGGCTTCTCCAAAAGGTCTCATACCAATGGAGATAGTATTCCTCACTTATAAACTCATGATCATTCCCTAAATTAGCCAACGTGGGACTCCCTTATATCCGAAATGAATTTGAACTTTATTTTAACGAGGAAAGGGAAGGAAGAGAGCTTAGGAAGAATATAGTTCTGTTTACCTTATGAACTCATGAGCATTGGCAAGAACAGCTGCTTGTCTGATCTCTGATTCCCCTGCTTCCTCTTTTCCATAGGCAATGTTTTCTCTGATAGTTCCAGCAAAAAGAGTTGGCTCTTGACTGACTAATGCTATTTGTGACCTTAACCATCTCAAATTGTAGTTCTTAATGTCCTGTTCGTCAATGTGTATAGACCCACTTGAGGGGTCATAAAACCTTTCTATAAGTCCAATAATAGTAGATTTTCCTGAGCCACTTTGTCCCACCAGGGCAACTGTTCTTCCTGCATCAATTTTAAGGCTCAGTCCCCTTAAAACTATCTGTTCTGGTCTTGTTGGATATGAGAATGAAACACTCCTGAGCTCCACTTTACCCTTTAACCGTCTTTTGAGATCCCGTCTTGATTTGTGATCGGGATCGATTTCAGTCTTCCTGTCTAGGATTGCGAACACTGATCCAACAGCATTGCTTCCTCTAGATATATCGGAAGTCATACTTCCAGCGTCGGCTATGATATATGCGGTGAATAGCAATATCAAGAATGCTTGGAAGATGTGCTCTGAGGATATCATGTTTTGTGTCAATAGCCTCCCACCATACCAGTAGGCCAAAGCTGTTGCAGCTGTGTTAAAGAACTGGGAACTGAATAGGCCAAGGCCAGATATCCAAGACTGTCTGGCACTTTCTTCCTTAGGAGCTTTAAGGGTGGCAGCAAAGAGCCCGAGTATCTTTTTCTGAGACGAGAATGCAACGATAGTTTTATGGTTCGTTACAGCTTCACTTGCAAGTTGGCTGCCTTCTCTTTGTGCTTTTCGGGATTTTTCAGCCATGCTCTTCATCAATACACTCCTTGCATAGAAGCTACCAATGACTAGTGGCTGTACTGCAATCATCACCAGAGTTAATCTCCATGAGAGCACAAGTCCCACAGTGTAAGCAAAGGCTGCACTAAAAATTGCTTGGACCAGTAATGACATTCTGTCTCCAACAAGGGAACGGACCATGTTGGCTTCAGTTGATAACCTTGCACAAATGGCTGCACTTGTGTTCTCATCTTGATCGAACCATCCAATTTCAAATGTCATAAGCTTTTCGAGTATTTTCTCACGCACCCGCTTCGTTAGTCTTTCTCCCATGATTGAAAAGTTGTAATGTTGCAGGATATTTGTTAAGAAGTTGAAAATGCCAATGCTTAAGAAGATAAGTGACAAGTTTCTGGCTTTAGACTTAATGTTGGGCTCATCAGCACGAAAATAAACTGATATGAGTGCTCCTACGCAATACGCGTTAATGGGTTGCACCGCTCCTGAGCCTAAAGCACCTAAACATCCAAGCAGTGCTTGTCCCCATTCCGGTGCATTCATTTTCAGTAAACGCCACTGGGAAGGAGAAGGATAAGCCGGATGTTTTTTATCTTCTTCAAAGCTTTCATCATCGGGATCAAACTGGACGGAGTAAGAGTAGGGTGTTCCCATGGAGACGGACAATGCTGAGCTGAAGGGATATAATACTGGAGTACTATATCCACTGGATCTCACACTGATTGGGCTTGTGGGAGTACTCATCCGATGGCGATATCTTCTATCCATTTCAATATTGGAATCGTAGAAAGTTTCATTCTGCACTGCCATCTGCTGCAACTGCACCATCCTTAGATACTCCCCACCATGTCCATTGTTCAACAGCATCAGCTCATCGTGTGAACCCGATTCAATTACTTGCCCAGCTTTAAGAACTACAATTTGATGTGCCGTTTGTATTGTTGAAAGACGATGTGCAACGGTGATCGACGTCCTTCCTTTTGATGCCTTATCAATTGCTTCCTGTACCATTCGTTCAGATTGTGCATCCAGTGCACTGGTTGCTTCATCAAGTAACAGTATTTTTGGGTCCCGAAGAAGAGCTCTTGCTATCGCAATTCGTTGCTTTTGACCTCCAGACATTTGGAAACCAAACTGACCGACCTGAAAAGAAGTCGACATACCAAAGGTTTTTTAAAGCAGACTAAGCTACATTCCATTATTTTTTAGTTTCAAATTGTTGTATTTGTTTCAAACTACCCAAGAGGCTGATCTATTTCATACACTTCTTTGTTTTGCAGTTGATAACTAGTTTTCGAGCCGTGAAGTCTTAGACAGCAGCCTAATTCTGTAAGTAAATATGTGACAAAAACTTACTTGAGTATCGTAACCTTCTGGTAGCTTAACGATGAAGTCGTGTGCATTTGCATCTTTAGCTGCATTTATCACTTGTTCCATTGAAGCTCCATCTTTTCCAAATATTATGTTCTCTTTTATTGAAGTTGCAAATAGAACAGGTTCCTGATTCACCAGACCCATTTGAGATCTTAGCCATTTTAGCTGAAATCTTTTTATTTTATGTCCATCTAAGAATATTTCTCCATCAGTAGGATCATAAAATCTTTCAAGCAGTGAGATAACCGTGGACTTCCCAGATCCGCTTCCTCCTATGAGTCCTACTCTCTTCCCTGCTGGAACCTTTAGATTGAATCCTCGTAATACAGGCGTATCTGGCCTTGACGGATAACTAAAATATACGTTTTGAAATTCGATTTCTCCTTTCACGTGAGATAGAGCTTTCTCCTTTTTGTCTTCTCTGTCTGTCTCAGCAACACGATCGATCATTTCAAGGATACGAGCAGTTGCAGATGTTGCTTCTGTGATCGAGGTTAGATGAGGCAATGCACTCAGTATACTCCTGAAAATGTCGAATTTACAGAAGAAACAATGAATGGAATTATGCAAACTAACTACAGCAATGAATGAACTGGATATAGATGATGAAGAAAACTCACAGCCCTCCCATTAGAACGTTGAAACCAGCTATAAAAACATTGCCTCCTTTTTCTCCTTTCTCGGTGACCAAATAAGTGCCAATCCAAGCTTGAAAGCCCCAACCAGCATAAATGATTCCCATACTTCCAAGCATCAATCCCTTCACCAAACCGGACTTAATCCCAAATTCCATACTTTTTTGGAGTGCTTGGCTGAATTTTTCCAGTGTTTGCCTTTCTCCTACGTATGAATATACAGTTCTTACTGAAGATACTGCTTGCTCTGCAATCCCACCAGCCACACCATAAGATTCAATCATTTTCATTATCAGGTCCATCATAATCTTGCCGAACACAAGCCCTGGACCAATGAACATGGCCGAGAGCGGGATGACTGCAAAGGTGAATTTCCACGATACTATAAAGGCAAATACGTGGCAGAAGAAGAATGTTGACATGTAAGTAAGGCAGTCAGGTATCTGCATAGAAAGAAAGAATGAGATATTCCTGCATGATGGTAGATGAAATTATTGATATCTCTTGGGCTATCCGTGTTTTTCATATTTATTGGATGATCCTTACATATTAGAAAATCTTGTCTACATATATAGTTTAAACCTTGCTGATAAATATCTCTAACATAGTTTCTGGTAATTAGTAGTTATGTAGATAGCCAAATAGATTCATTGATAGTTTCTCTGAGACCGAACCTTTTCACATAAGGCGACTTGGATTGAACTGGCGTCGGAGGAAATGAGGGAGACAACCTCGTGAGTCGTCGAACCGGTTTGGGTATCAAAGAAACTAACTTCTTGTTTAAGCACAGATTTCAAATATTCCATTCTCATCCTAGATGTCTGTCTCTCTGCTGTTCTTGCCCAACACAATCCCTCTGAAAAGTTAAAATTGTGAAGCTTAGTGAGAAAAACATAAACTATTACCCTCTTACCCCATGAATATATTTCCAGCAACTAGGCTCACCCACAAAGGCTGAAAGTCCGACGCCAACTGCAGCGTAAAGTAGACGCAGTGCAAACTGAAACATATTAGAATAGCAAGTTAACAAATTGCTGTACAAACTATATCACTAACAGCATTTAGCCTGTAGGCTGGGTAATAAATGACAAAAGTTCATAATTAAATGCAGTTTCTAGTATTTTTCCTCTGGCCAGGAAGGCATCTCACTATTGTAGAAACTGTTTTCTTTCTCTGCCTCCTTTGGTTGCCTTATGATCAAACAATATATGATCGAGAGCTGTAAGCTATTTGTTTTGTGGGCTGAACATTATGTTTTATGCTATGGTATTTGGTCTTAGTTGGACATATTCTTTGTTTCAGTCTCTCGTTAGTTCTTTTGTAACAGCCTAGGCCCACCGCTAGCAGATATTGTTCTCTTTGGGCTTTCCTTCAAGGTTTTTAAAACGTGGCTGCTAGGGAGAGGTTTCCACACCCTTATAAAAAATGTTTCGTTTTCCTTCCCAACCGATGTGGGATCTCACAATCCACCCCTATTCAGGAGCCTAGCATCCTCGCTGGCACTCGTTTCCTTCTCCAATCAATATGGGAACCCCCAATCCACCCCTCTTCGGGGCTAGTGTCCTTGCTGGCACACCTCCTCGTGTCCACCCCCTTTGGGGCTCAGCCTCCTCGCTGGCACATTGCCCGGTGTCTGGCTCTTATACCATTTCTAACAGCTCAAGCCCACCGCTAGCATATATTGTCCTATTTGGGCTTTTCCTTTCGGACTTCCCCTCTAGATTTTTAAAACGTGTCTGCTAAGGAGAGGTTTCTATACCCTTATAAAGAATGCTTCGTTCTCCTCCCCGACCAATGTGGGATCTCACAATCCACCTTCCTTCGGGGTCCAACGTCTTTGTTGGCCCTCGTTCCCCTCTCCAATTGACGTGGGATCTCACAATCCACCCACTTTCGGAGACCAGCGTCCTCGCTGGCACTCGTTCCTCTCTCCAATCAATGTGAAATCTCACAATTCTTCTCTCTTGCCTTTTCTTTTTGAAAATGTGTAGTTAGTTCACTTTACCTTCTGTCCTTTCTATCTAGCCACTATTATTGGTTTCAAGTATTTGTTAATTTCCTCTCAATCAAATCAACGACAGAGTTTTCCATAAGAAAAGGCAACATAACAAAGAGGAGCAAGCCTTACCTTGTCAACCATATCGTTTGTCAAGCCACTGTTCTTGTCTCCATAAGCATTGATTACATCCTTAAGAAGGAACATCGTGAGAGGGATCTGTGATCCATCTCCTATGCTGCCCAAAGTCCCAAAAAACATCAGAAACTTGTCGAAGCCATCAGCATACCGAAACATGCTTTTGCCTGCCATTTTTTCAGCTCTGTGGTTTAGAAGAGTGACAGAGAGAAAGAGAGGAGCAGCATTCTCTGAAATGGCCAATGCCAGGTGAGATAAGAATGATTCTACTTTATATTTGAGCCTTGCCGGCGCCATAGTGATTCCTTAATTGTCAATATCTTGGCATTACTATTCGTTTGTCTGGAAGCAATTTCAAGCCTTTGGGTAGACTGATTCTCCTTTCTGGTTATTGAAAAACACAAGTGACTCAGAAATGCATTAACAAAACTTCAAAAATGAAGATGATTGATTTGAGATTCTTGAATGATATGATAGGTTGAGTTTTTTGTTTCTTCTTCTGCCTTTTGGACTGCTTTGTATGACTATTATGGTTATGTTTTGTGAGATCCCACATTGATTGGAGAGGGGAACAGATCATTCCTTTTAAGGGTGTGGAAACCTCTCCCTAGTGGACGTGTTTTAAAACCTTGAGGGGAAACCCAGAAGGGAAAACTCAAAGAGGGCAATATCTACTTGCATTTTTCCCTTCTTCTGCCTTTGGACTGCTTTGTATGGCCATGGTTATGTTTTGTGAGATCCCACGTCGGTTGGAGAGGGAAGCGGAACATTCCTTATAAGAGTGTGAAAACCTCTCCCTAGTGGACGTGTTTTAAAGTCTTGAGGGGAAACCCGGAAGGGAAAACTCAAAGAGGACAATATCTGCTAGCGTTTTTCCTTCTTCTGCATTTGGACTGCTTTGTATAGCCATGGTTATGTTTTGTGAGATCCCACATCGGTTGGAGAGGGAAGCATAGCATTCCTTATAAGGGTGTGAAAACCTCTCCCTAGTGGACGCGTTTTAAAACCTTGAGGGGAATCCCGGATGGGAGAGTCCCAGGACCATATCTGTTAGCCAGCCCATGTTTATGTCTGGTTTTTTTCTAATTGTTTACTTCTCCAAAACTAAGCATTTTCTGCCTGCAATCTTTGCTCCCTTCCTAATGCATAAGGCCAAAAAGACTGCACTTAGGAGACTATGAAGCAACAATGCTTTGTTGTCTTGGGGCTAAAGGTTAACCCGTCATCCTCGTTAA

mRNA sequence

ATTTTAATTTGACGTGGGTTCATCATGTTCATAGAAAAATTGTTCTAACTGATTCAATTTCTGGGCTTACAATTACAACAAGCTTAAACCCATAAATCCCCACAAGAATTTCAACGATTCAGCGCGGAGGGAAGTTTCCGGCCTGCGATTTTGTCAAAGAATAGTACTCTCCACGGCGCCCCATTGAAATCAGCTCATTGTGCGATCCTTGTTCCACAACTTTCCCGTTCTTGATCACGGCGATGGTGTTCGCTTTCTGAATCGTCGATAAGCGGTGGGCGACGATTATGCAGGTTCTGTTTATCATCATCTTCTCTAGGGCTTCCTGCACCAAATTCTCTGATACGCTGTCGAGCGCGCTTGTTGCCTCATCTAGCAGCAGGATTGATGGGTTCTTCAGGATCGCTCTTGCCAGTGCGATTCTTTGCTTTTGCCCGCCTGATAGCTGCGCTCCTCTCTCGCCACAGTCCATCATAATCTTGCCGAACACAAGCCCTGGACCAATGAACATGGCCGAGAGCGGGATGACTGCAAAGGTGAATTTCCACGATACTATAAAGGCAAATACGTGGCAGAAGAAGAATGTTGACATAAGAGTGACAGAGAGAAAGAGAGGAGCAGCATTCTCTGAAATGGCCAATGCCAGGTTAACCCGTCATCCTCGTTAA

Coding sequence (CDS)

ATGCAGGTTCTGTTTATCATCATCTTCTCTAGGGCTTCCTGCACCAAATTCTCTGATACGCTGTCGAGCGCGCTTGTTGCCTCATCTAGCAGCAGGATTGATGGGTTCTTCAGGATCGCTCTTGCCAGTGCGATTCTTTGCTTTTGCCCGCCTGATAGCTGCGCTCCTCTCTCGCCACAGTCCATCATAATCTTGCCGAACACAAGCCCTGGACCAATGAACATGGCCGAGAGCGGGATGACTGCAAAGGTGAATTTCCACGATACTATAAAGGCAAATACGTGGCAGAAGAAGAATGTTGACATAAGAGTGACAGAGAGAAAGAGAGGAGCAGCATTCTCTGAAATGGCCAATGCCAGGTTAACCCGTCATCCTCGTTAA

Protein sequence

MQVLFIIIFSRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSPQSIIILPNTSPGPMNMAESGMTAKVNFHDTIKANTWQKKNVDIRVTERKRGAAFSEMANARLTRHPR
Homology
[Close]
BLAST of CmaCh09G009270 vs. ExPASy TrEMBL
Match: A0A103YAT5 (Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_015993 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 5.0e-13
Identity = 58/105 (55.24%), Postives = 64/105 (60.95%), Query Frame = 0 

Query: 2   QVLFIIIFSRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSPQS 61
           QVL  IIFS ASCT+FSD LSSALVASS+ RI GF  IA ASA LCF PPDSC PLSPQ+
Sbjct: 50  QVLPTIIFSNASCTRFSDALSSALVASSNRRIAGFLSIARASATLCFWPPDSCTPLSPQA 109

Query: 62  IIILPNTSPGPMNMAESGMTAKV-NFHDTIKANTWQKKNVDIRVT 106
              L      PM  A    TA+  +F    K     KKN  I V+
Sbjct: 110 TFGLQTALNLPMKPATPTPTARTSSFSAYFKIK--YKKNSSIMVS 152

[Close]
BLAST of CmaCh09G009270 vs. ExPASy TrEMBL
Match: A0A251U190 (Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0208451 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-12
Identity = 50/73 (68.49%), Postives = 53/73 (72.60%), Query Frame = 0 

Query: 2   QVLFIIIFSRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSPQS 61
           QVL  IIFS ASCT FSDTLSSALVASS  RI GF  IALASAILCF PPDS  PLSPQ 
Sbjct: 50  QVLPTIIFSNASCTSFSDTLSSALVASSKRRIAGFLSIALASAILCFWPPDSWTPLSPQP 109

Query: 62  III--LPNTSPGP 73
            ++  +  T  GP
Sbjct: 110 AMMTQIAETKTGP 122

[Close]
BLAST of CmaCh09G009270 vs. ExPASy TrEMBL
Match: A0A0A9NST8 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.7e-11
Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 0 

Query: 3  VLFIIIFSRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSPQSI 62
          VLF++  SRASCT  SD+ S ALVASS+SRI G FRIALA AILCFCPP+SC P SP  +
Sbjct: 4  VLFVMTLSRASCTILSDSASRALVASSNSRILGSFRIALAMAILCFCPPESCVPCSPTEV 63

[Close]
BLAST of CmaCh09G009270 vs. ExPASy TrEMBL
Match: A0A0A9JHP2 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 4.7e-11
Identity = 41/60 (68.33%), Postives = 47/60 (78.33%), Query Frame = 0 

Query: 3  VLFIIIFSRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSPQSI 62
          VLF++  SRASCT  SD+ S ALVASS+SRI G FRIALA AILCFCPP+SC P SP  +
Sbjct: 21 VLFVMTLSRASCTILSDSASRALVASSNSRILGSFRIALAMAILCFCPPESCVPCSPTEV 80

[Close]
BLAST of CmaCh09G009270 vs. ExPASy TrEMBL
Match: A0A4S8JB45 (Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb03t12230 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10
Identity = 42/60 (70.00%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 3  VLFIIIFSRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSPQSI 62
          VL  I  S A CT FSD LSSALVASSSS + GFF  ALA AI CFCPPDSC PLSPQ++
Sbjct: 12 VLPAITLSNAPCTTFSDWLSSALVASSSSSMTGFFSTALAIAIRCFCPPDSCTPLSPQNV 71

[Close]
BLAST of CmaCh09G009270 vs. NCBI nr
Match: KVI05652.1 (Protein of unknown function DUF1602, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 84.0 bits (206), Expect = 1.0e-12
Identity = 58/105 (55.24%), Postives = 64/105 (60.95%), Query Frame = 0 

Query: 2   QVLFIIIFSRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSPQS 61
           QVL  IIFS ASCT+FSD LSSALVASS+ RI GF  IA ASA LCF PPDSC PLSPQ+
Sbjct: 50  QVLPTIIFSNASCTRFSDALSSALVASSNRRIAGFLSIARASATLCFWPPDSCTPLSPQA 109

Query: 62  IIILPNTSPGPMNMAESGMTAKV-NFHDTIKANTWQKKNVDIRVT 106
              L      PM  A    TA+  +F    K     KKN  I V+
Sbjct: 110 TFGLQTALNLPMKPATPTPTARTSSFSAYFKIK--YKKNSSIMVS 152

[Close]
BLAST of CmaCh09G009270 vs. NCBI nr
Match: KAF5793593.1 (hypothetical protein HanXRQr2_Chr08g0318181 [Helianthus annuus])

HSP 1 Score: 82.4 bits (202), Expect = 3.0e-12
Identity = 50/73 (68.49%), Postives = 53/73 (72.60%), Query Frame = 0 

Query: 2   QVLFIIIFSRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSPQS 61
           QVL  IIFS ASCT FSDTLSSALVASS  RI GF  IALASAILCF PPDS  PLSPQ 
Sbjct: 50  QVLPTIIFSNASCTSFSDTLSSALVASSKRRIAGFLSIALASAILCFWPPDSWTPLSPQP 109

Query: 62  III--LPNTSPGP 73
            ++  +  T  GP
Sbjct: 110 AMMTQIAETKTGP 122

[Close]
BLAST of CmaCh09G009270 vs. NCBI nr
Match: THU58254.1 (hypothetical protein C4D60_Mb03t12230 [Musa balbisiana])

HSP 1 Score: 76.3 bits (186), Expect = 2.2e-10
Identity = 42/60 (70.00%), Postives = 45/60 (75.00%), Query Frame = 0 

Query: 3  VLFIIIFSRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSPQSI 62
          VL  I  S A CT FSD LSSALVASSSS + GFF  ALA AI CFCPPDSC PLSPQ++
Sbjct: 12 VLPAITLSNAPCTTFSDWLSSALVASSSSSMTGFFSTALAIAIRCFCPPDSCTPLSPQNV 71

[Close]
BLAST of CmaCh09G009270 vs. NCBI nr
Match: KVH98170.1 (Protein of unknown function DUF1602 [Cynara cardunculus var. scolymus])

HSP 1 Score: 72.0 bits (175), Expect = 4.1e-09
Identity = 37/53 (69.81%), Postives = 44/53 (83.02%), Query Frame = 0 

Query: 7  IIFSRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSP 60
          ++FSRAS T+ SD  S+ALVASS S++ GFFRIA A AILCFCPPD+C PLSP
Sbjct: 1  MVFSRASWTRASDLRSNALVASSRSKMAGFFRIARAMAILCFCPPDNCTPLSP 53

[Close]
BLAST of CmaCh09G009270 vs. NCBI nr
Match: KAF8110578.1 (hypothetical protein N665_0081s0011 [Sinapis alba])

HSP 1 Score: 72.0 bits (175), Expect = 4.1e-09
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 0 

Query: 10 SRASCTKFSDTLSSALVASSSSRIDGFFRIALASAILCFCPPDSCAPLSP 60
          S+ASCT FSD+ S+ALVASS   I GFF +ALA AILCFCPP+SC+PLSP
Sbjct: 4  SKASCTSFSDSESNALVASSKRSIAGFFNMALAIAILCFCPPESCSPLSP 53

The following BLAST results are available for this feature:
BLAST of CmaCh09G009270 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G009270 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A103YAT55.0e-1355.24Uncharacterized protein (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 ... [more]
A0A251U1901.5e-1268.49Uncharacterized protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr08g0208451 PE... [more]
A0A0A9NST84.7e-1168.33Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0A9JHP24.7e-1168.33Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A4S8JB451.1e-1070.00Uncharacterized protein OS=Musa balbisiana OX=52838 GN=C4D60_Mb03t12230 PE=4 SV=... [more]
BLAST of CmaCh09G009270 vs. NCBI nr
Match NameE-valueIdentityDescription
KVI05652.11.0e-1255.24Protein of unknown function DUF1602, partial [Cynara cardunculus var. scolymus][more]
KAF5793593.13.0e-1268.49hypothetical protein HanXRQr2_Chr08g0318181 [Helianthus annuus][more]
THU58254.12.2e-1070.00hypothetical protein C4D60_Mb03t12230 [Musa balbisiana][more]
KVH98170.14.1e-0969.81Protein of unknown function DUF1602 [Cynara cardunculus var. scolymus][more]
KAF8110578.14.1e-0972.00hypothetical protein N665_0081s0011 [Sinapis alba][more]
BLAST of CmaCh09G009270 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G009270.1CmaCh09G009270.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0043167 ion binding
molecular_function GO:0016491 oxidoreductase activity