CmaCh09G007450 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G007450
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Biogenesis of lysosome-related organelles complex 1 subunit 7
Location	Cma_Chr09: 3555291 .. 3559530 (-)
RNA-Seq Expression	CmaCh09G007450
Synteny	CmaCh09G007450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACCATTAATTGTAATTTGAATTTGGAGTGTAATTTAGATAAAATTGGAAGATAAAAGAATAAAAATTAGTATAATTTAGGGGGAAAATACCTTGACACATTGTTACTCAGATTCTTTTCGGAATTGGGCTAGAAATTCTTCTCTCTGATTCCTATCTCGCACGATTGCGCCGGCGACGTCGAACCAGTTAGCGGATTCTTTTGGATTCGAAGCACGAAGTTTAGAGAGACTGCGAACTACGGTAGGTGGTGATGTCCCGTTTTACTTCAATTTATCTATGGAATTCGATTATCATTCCATGCTCGTATTGCTTGATTTTTTAGTATGAATGGAAGCTAATCTCGAGGAAACTTTTGCTTATTGCGGAGTTCCAACCTAGATGCGTCGAGTGATCCTTGTTCAAAAATTCCAGAAAATTAGCGTTTCGCTAGTCATGCGCTGTGCTTTTTGTTCCAATCCTTTCGTTGACTGTTCTTCTTCCAGTGATCTTATACTATTATCAGTTTCTTGCATTCATCTGGATGTTCATTTCGTTGGTTTGTAGATAATTTTTTTAGAGAAGTATAGCAGATATAGTTGTCAGTTGCTGCGCATTAACTATATTCTGTTCTGGTATTCAAGAATTTGCAATTGAATCTGTATGATTATTTCCGAATAATTGCGGTAGTTGCGAGCTTAATTTCATGGAAATTTCTTGTTCTCGTGTTTTGCTTAAAATTTTGCTCCGGACAGTCGACCCCCGGGATTTATTCTTAGTAGCTATTAGTTTTGATTTTTCTCTCGTTGATGGCAAACTCATTACATGTTGAAATTGTGGAAACTATTTTCATTTTGTTGTTTTTTGCCGCACATTATGGATGTTATAATTGGTTCTATATTATGCTGGTCACTATCGAACCTTATGTGTTCGGAGAAAGATGGGCGATTACGATTGTGACAACGAAATAGGCGATCTGTTTCAGATATTGGCTGAGATGCACAGTCCGGAGAAAGTACTCGACGATCCTGCCAATGAGGACAGCAGCTTCTCTGTCGAATTGGAGACTTCCATTAGTCGAAATGGCAATCTCAAGGAAGAAAATGATCTTGCAAACACGAATTTGGAAAACTCTAATGCTCTAGCAAATGGGCTTTCTTCCATGCTTATCAACATCATAAGGGATTTTGATTCCAAAGCTGATGATACTCTTAAAAGCCAAAGCCAGCTTTCATCTTCCCTTGATCGTATCACTACAGGTAGAATTACTCTTACTTTGTTTTTGTGAGATCCCACATCGGTTGGAGAGGGAAACGAAACATTCTAAAGGTGTGGAAACCTCTCCCTAGCAAATGCGTTGTAAAAACCTTGAGAGGGAAGCCCATAAGGAAAAGCCCAAAGAGGACAATATCTGCTAGCGTTATTAGCTTTTTCCTATAAAATAGAGTTGCTTTCTTGTACTACTTTGACTAATTATATTATAGCAATATAGCTTCGAAGATTCTGTCACTTGCTAGGTTTTACATTATAAATGACATTCTCTCATAATTTACCTTTTTTCTTGTCCTGGATGCAAAAATTTAACTTTTGAATTTCATGGCCTTTTCAATGTTGTGAAAAGTTATTACTTCAACCTTCACAGAACTGGATCAGTTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCGAGGATTTCAAGTGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGATTAGATAACATAGATCGGGCAATCTCGATGGGCAATCGACCAGGTGATTTGCTTCTCTCTTCAATGGCCTCAATTTTATTATCTTTTATGGCTTTTAATTTAATGGAAATTTATTGGATAATATCATTGGCTGTCAAGGTTGTTTAATAATGTTCCCATTTCTCGTTTCCAAAAAAACACATACGTATGATAATGACTATTTGTTTTTTTATTCTCTCCATTTTATCATAATCATTTTCTGTTTTTAATTCATTCGACATACAAGTGATGAGATTGTGGATCGATGAAGTTTTTGAGTTGCCCTTTGTTTTTCCTGGCATTCCCTGTATTATTCTGTGTATTGATTTACATATGATGAACTCAAATTGGGCTAGTATTTATTGGGAAACCTCAGTTGTTCCTTCTTATGGAAGATTTTGAACCTTCACATTAACATGTGGAACAAGAAATTTTTTAATGATGATTTTAAACGTACCAACAAGGATCTTTTATTCTTGAATGGAAAGATGGAATTGAGATATTCATTGCAAAACCTCAGTTCTTCCTTCACAGTGTTTATTAATCAAAATATCATATGATTTTTTTAAATACATATGTAATTGGACGTGTTCTTAATGTAACAATTTTGTAAGAAGGCATGTTTCTCTGTTGAAGTTTAGGCTAAATATCTGTTGAGTGTGCAAATATTAGTTTCATGATTCGTTATAACCATGCTTCTTATGCCGTAAATCATGATTTTGTTTTGCTTTCTGAATGTTTGAGCTTACTTCTGGCAATGCCATGGGACATATGGTAGTTTCAATTTTGACACTTGAATTCTTTTTTGTTTTGGGCCTTTTATAAAATATACTTTTTAACTTGAATTTCCTTTAATTTTCTAGCATTTAAATATCTATAATGTAGGATGTTGAAATTTCACATGACTTCATCCCGGGTTGTAGACATTGGTAATTTTGTTTGAAGCTTTGAGCGAATTTCTCATCTTTTTTACCATAATAACTGAAGTAAGTTTATATGTCATGTTCTTTACCTTCTCCTTCGATGGAAATTACTTGGTACTTCTTCCTTTAAGATTAGAGGTTCAAGTCTTCATGCCTCAACGTTTATTATACGAAAAAAAAGAACGAAGTAAAATTTTTGAACTACTCCTAAGGAAGCTTATCTACTAGATACTTAGATACTAAGGTCCAAAGGTCCAAAGTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGTTTTCCCAAAAGGCCTCATACTAAGGGAGAGTGTATTCTTAGATTATAAACTCATGACCATTCTCTAAATTAACCAATGTGGGACACTTTCATCCAACACAAAAGTCCAAGGGTACTATTTAAGACATTGGTAATTTGTTTGAAGCTTTGAGCGAATTTCTCATCTTTTTGCATTTATATGTAATGTTTTCTACCTTCTAGTGGAAATTACTGGGTACTTCTTCCTTTAAGATTAGATGTTCAAATGTTCATGCCCCAACGTTCATTATACTCAAATTTATTGTATGAAAAAAAGAATGAAGTAAAATTTTTGAACAACTCCTAAGGAAGCATATCTACTAGATACTAAGATCCAAGTGTACTATTTAAGATATATATATACTATACTAGAATCAGTTCCTTGTGTTTTGATGGCTTGTACCTCTTCGCTCCGGAACCTGATTTCACTGAAAACTCGGTTTCAAATCTTTGATTGGTATCCCTTCCCTTCCCTTCCCATCTCATCATGTAGTCTGCATCAATCAGTGGTATAAATTATAGCATTCATATGCTGAGAAATTACTTGCTCGGTTTTCACTATTACCACAGAATAAAAGACTCCTCCAGATTTCTGTCTCATAATTTGGATCCTCGTGAAAGGTCTATAGATTAAATGTTTATTTTCTGATTGCCAGTCGTAGGCATTCATTTTGTAGCTCATTTGGCTGATTCTTTTTGCACTATACGTTGAAATATTAACTATTTTTTGTCACGTGAGATCAGTCGAGGTGCGCGCAAGCTAGCTTCGAGCCTTGTCTCATTGTCACTCAAATATTCCTTGTTGTGTACAGATACTCTTTCCTCTCAAAGTTGCTCGCAAACTCAACATGGTTGAAGATTGTACGTACTCTAACGTCCCTTTTCTCTCTTCACTGAAAATACTGCGGTAGAAAGGCTGTGTTTATGAACAATCAATTTTGAATGTACAACCTGGGTAATTTTTCCATTTGTAAGTTAAGAGCTATGGCTCCCTCACTCTCTCAGGAAAATTTTTAGTACACATATATGTATAAATACTCTTTCGTCCGCACTATCAATTTTATTTTGCTTATCTTTTAACGATGTTAACGTGACGGGCAACAAATCGAACTAGTACATCACCCTACAATAGTATTGAAATTTTCTCCCTCGGTCTATGTACACACACATACAACTTGCACAATTTATCTATTTCCG

mRNA sequence

ATGTTAGCGGATTCTTTTGGATTCGAAGCACGAAGTTTAGAGAGACTGCGAACTACGATATTGGCTGAGATGCACAGTCCGGAGAAAGTACTCGACGATCCTGCCAATGAGGACAGCAGCTTCTCTGTCGAATTGGAGACTTCCATTAGTCGAAATGGCAATCTCAAGGAAGAAAATGATCTTGCAAACACGAATTTGGAAAACTCTAATGCTCTAGCAAATGGGCTTTCTTCCATGCTTATCAACATCATAAGGGATTTTGATTCCAAAGCTGATGATACTCTTAAAAGCCAAAGCCAGCTTTCATCTTCCCTTGATCGTATCACTACAGAACTGGATCAGTTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCGAGGATTTCAAGTGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGATTAGATAACATAGATCGGGCAATCTCGATGGGCAATCGACCAGATACTCTTTCCTCTCAAAGTTGCTCGCAAACTCAACATGGTTGAAGATTGTACGTACTCTAACGTCCCTTTTCTCTCTTCACTGAAAATACTGCGGTAGAAAGGCTGTGTTTATGAACAATCAATTTTGAATGTACAACCTGGGTAATTTTTCCATTTGTAAGTTAAGAGCTATGGCTCCCTCACTCTCTCAGGAAAATTTTTAGTACACATATATGTATAAATACTCTTTCGTCCGCACTATCAATTTTATTTTGCTTATCTTTTAACGATGTTAACGTGACGGGCAACAAATCGAACTAGTACATCACCCTACAATAGTATTGAAATTTTCTCCCTCGGTCTATGTACACACACATACAACTTGCACAATTTATCTATTTCCG

Coding sequence (CDS)

ATGTTAGCGGATTCTTTTGGATTCGAAGCACGAAGTTTAGAGAGACTGCGAACTACGATATTGGCTGAGATGCACAGTCCGGAGAAAGTACTCGACGATCCTGCCAATGAGGACAGCAGCTTCTCTGTCGAATTGGAGACTTCCATTAGTCGAAATGGCAATCTCAAGGAAGAAAATGATCTTGCAAACACGAATTTGGAAAACTCTAATGCTCTAGCAAATGGGCTTTCTTCCATGCTTATCAACATCATAAGGGATTTTGATTCCAAAGCTGATGATACTCTTAAAAGCCAAAGCCAGCTTTCATCTTCCCTTGATCGTATCACTACAGAACTGGATCAGTTACTTGAAGATGCACCTTTTCCATTCATCATGCAGCATGCCTCGAGGATTTCAAGTGTAAGAAAGAGAGTTTTGTCACTAAATTCCATCTTAAGATCCATACAACGAAGATTAGATAACATAGATCGGGCAATCTCGATGGGCAATCGACCAGATACTCTTTCCTCTCAAAGTTGCTCGCAAACTCAACATGGTTGA

Protein sequence

MLADSFGFEARSLERLRTTILAEMHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINIIRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNSILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG

Homology

[Close]

BLAST of CmaCh09G007450 vs. ExPASy TrEMBL
Match: A0A6J1IKP2 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita maxima OX=3661 GN=LOC111477110 PE=3 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 5.0e-75
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 24  MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 83
           MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI
Sbjct: 1   MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 84  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 143
           IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 120

Query: 144 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 180
           ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG
Sbjct: 121 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 156

[Close]

BLAST of CmaCh09G007450 vs. ExPASy TrEMBL
Match: A0A6J1FEP4 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111443260 PE=3 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 9.8e-71
Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 24  MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 83
           MHSPEKVLDDPANEDSS SVELETSISRNG+LKEENDLANTNLENSNALANGLSSMLINI
Sbjct: 1   MHSPEKVLDDPANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 84  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 143
           IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLE APFPFIMQHASRISSVRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEAAPFPFIMQHASRISSVRKRVLSLNS 120

Query: 144 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 180
           IL SIQRRLDNIDRAISMGNRPDTLSSQS SQTQHG
Sbjct: 121 ILGSIQRRLDNIDRAISMGNRPDTLSSQSSSQTQHG 156

[Close]

BLAST of CmaCh09G007450 vs. ExPASy TrEMBL
Match: A0A6J1F9C2 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111443260 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.2e-68
Identity = 151/163 (92.64%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 24  MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 83
           MHSPEKVLDDPANEDSS SVELETSISRNG+LKEENDLANTNLENSNALANGLSSMLINI
Sbjct: 1   MHSPEKVLDDPANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 84  IRDFDSKADDTLKSQSQLSSSLDRIT-------TELDQLLEDAPFPFIMQHASRISSVRK 143
           IRDFDSKADDTLKSQSQLSSSLDRIT       TELDQLLE APFPFIMQHASRISSVRK
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTVITSTFTELDQLLEAAPFPFIMQHASRISSVRK 120

Query: 144 RVLSLNSILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 180
           RVLSLNSIL SIQRRLDNIDRAISMGNRPDTLSSQS SQTQHG
Sbjct: 121 RVLSLNSILGSIQRRLDNIDRAISMGNRPDTLSSQSSSQTQHG 163

[Close]

BLAST of CmaCh09G007450 vs. ExPASy TrEMBL
Match: A0A6J1FIR1 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111445840 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.8e-55
Identity = 123/156 (78.85%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 24  MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 83
           MHS EKV DD AN+DS  S ELE SIS NG+++EEND+AN NL +SNALANGLSSML+NI
Sbjct: 1   MHSLEKVHDDSANKDSKVSAELEPSISPNGDIEEENDIANMNLGDSNALANGLSSMLMNI 60

Query: 84  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 143
           +RDFDSKADDTLKSQSQLS SLDR+T+ELDQLLEDAPFPFIMQHA RISSVRKRVLSLNS
Sbjct: 61  MRDFDSKADDTLKSQSQLSFSLDRLTSELDQLLEDAPFPFIMQHALRISSVRKRVLSLNS 120

Query: 144 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 180
           ILRS+QRR+DNIDR ISM N PD  SSQS SQ  +G
Sbjct: 121 ILRSVQRRVDNIDRVISMSNLPDIRSSQSSSQPHNG 156

[Close]

BLAST of CmaCh09G007450 vs. ExPASy TrEMBL
Match: A0A6J1CN29 (Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Momordica charantia OX=3673 GN=LOC111013092 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 6.4e-54
Identity = 121/156 (77.56%), Postives = 136/156 (87.18%), Query Frame = 0


Query: 24  MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 83
           MHSPE  L+  AN+DS+ SVELE S+S+NG L+E N +AN NL N++ +A GLSSML NI
Sbjct: 1   MHSPEGELNQSANQDSNVSVELEHSVSQNGLLREGNGIANMNLGNADTVAKGLSSMLSNI 60

Query: 84  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 143
           IRDFDSKADDTLKSQSQLSSSLDR+T+ELDQLLEDAPFPFIMQHASRIS+VRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRLTSELDQLLEDAPFPFIMQHASRISNVRKRVLSLNS 120

Query: 144 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 180
           ILRSIQRR+DNIDRAI+MGN  DT SSQS  Q QHG
Sbjct: 121 ILRSIQRRVDNIDRAIAMGNLQDTCSSQSSLQPQHG 156

[Close]

BLAST of CmaCh09G007450 vs. NCBI nr
Match: KAG6591843.1 (hypothetical protein SDJN03_14189, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 298.5 bits (763), Expect = 3.8e-77
Identity = 166/178 (93.26%), Postives = 170/178 (95.51%), Query Frame = 0


Query: 2   LADSFGFEARSLERLRTTILAEMHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDL 61
           LADS GFE RSLERLRTT+LAEMH PEKV DDPANEDSS SVEL TSISRNG+L+EENDL
Sbjct: 41  LADSSGFE-RSLERLRTTVLAEMHGPEKVPDDPANEDSSASVELLTSISRNGDLQEENDL 100

Query: 62  ANTNLENSNALANGLSSMLINIIRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPF 121
           ANTNLENSNALANGLSSMLINIIRDFDSKADDTLKSQSQLSSSLDRITTELDQLLE APF
Sbjct: 101 ANTNLENSNALANGLSSMLINIIRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEAAPF 160

Query: 122 PFIMQHASRISSVRKRVLSLNSILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 180
           PFIMQHASRISSVRKRVLSLNSILRSIQRRLDNIDRAISMGN+PDTLSSQS SQTQHG
Sbjct: 161 PFIMQHASRISSVRKRVLSLNSILRSIQRRLDNIDRAISMGNQPDTLSSQSSSQTQHG 217

[Close]

BLAST of CmaCh09G007450 vs. NCBI nr
Match: XP_022976873.1 (uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976874.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976875.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976876.1 uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976877.1 uncharacterized protein LOC111477110 [Cucurbita maxima])

HSP 1 Score: 290.4 bits (742), Expect = 1.0e-74
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 24  MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 83
           MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI
Sbjct: 1   MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 84  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 143
           IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 120

Query: 144 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 180
           ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG
Sbjct: 121 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 156

[Close]

BLAST of CmaCh09G007450 vs. NCBI nr
Match: XP_023535159.1 (uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535160.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535161.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535162.1 uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 24  MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 83
           MHSPEKVLDDPANEDS+ SVELETSISRNG L+EENDLANTNLENSNALANGLSSMLINI
Sbjct: 1   MHSPEKVLDDPANEDSNVSVELETSISRNGGLQEENDLANTNLENSNALANGLSSMLINI 60

Query: 84  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 143
           IRDFDSKADDTLKSQSQLSSSLDRIT ELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITIELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 120

Query: 144 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 180
           ILRSIQRRLDNIDRAISMGNRPDTLSSQS SQTQHG
Sbjct: 121 ILRSIQRRLDNIDRAISMGNRPDTLSSQSSSQTQHG 156

[Close]

BLAST of CmaCh09G007450 vs. NCBI nr
Match: XP_022936774.1 (uncharacterized protein LOC111443260 isoform X2 [Cucurbita moschata] >XP_022936775.1 uncharacterized protein LOC111443260 isoform X2 [Cucurbita moschata])

HSP 1 Score: 276.2 bits (705), Expect = 2.0e-70
Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 24  MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 83
           MHSPEKVLDDPANEDSS SVELETSISRNG+LKEENDLANTNLENSNALANGLSSMLINI
Sbjct: 1   MHSPEKVLDDPANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 84  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASRISSVRKRVLSLNS 143
           IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLE APFPFIMQHASRISSVRKRVLSLNS
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEAAPFPFIMQHASRISSVRKRVLSLNS 120

Query: 144 ILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 180
           IL SIQRRLDNIDRAISMGNRPDTLSSQS SQTQHG
Sbjct: 121 ILGSIQRRLDNIDRAISMGNRPDTLSSQSSSQTQHG 156

[Close]

BLAST of CmaCh09G007450 vs. NCBI nr
Match: XP_022936769.1 (uncharacterized protein LOC111443260 isoform X1 [Cucurbita moschata] >XP_022936770.1 uncharacterized protein LOC111443260 isoform X1 [Cucurbita moschata] >XP_022936771.1 uncharacterized protein LOC111443260 isoform X1 [Cucurbita moschata] >XP_022936772.1 uncharacterized protein LOC111443260 isoform X1 [Cucurbita moschata] >XP_022936773.1 uncharacterized protein LOC111443260 isoform X1 [Cucurbita moschata])

HSP 1 Score: 269.2 bits (687), Expect = 2.5e-68
Identity = 151/163 (92.64%), Postives = 152/163 (93.25%), Query Frame = 0


Query: 24  MHSPEKVLDDPANEDSSFSVELETSISRNGNLKEENDLANTNLENSNALANGLSSMLINI 83
           MHSPEKVLDDPANEDSS SVELETSISRNG+LKEENDLANTNLENSNALANGLSSMLINI
Sbjct: 1   MHSPEKVLDDPANEDSSVSVELETSISRNGDLKEENDLANTNLENSNALANGLSSMLINI 60

Query: 84  IRDFDSKADDTLKSQSQLSSSLDRIT-------TELDQLLEDAPFPFIMQHASRISSVRK 143
           IRDFDSKADDTLKSQSQLSSSLDRIT       TELDQLLE APFPFIMQHASRISSVRK
Sbjct: 61  IRDFDSKADDTLKSQSQLSSSLDRITTVITSTFTELDQLLEAAPFPFIMQHASRISSVRK 120

Query: 144 RVLSLNSILRSIQRRLDNIDRAISMGNRPDTLSSQSCSQTQHG 180
           RVLSLNSIL SIQRRLDNIDRAISMGNRPDTLSSQS SQTQHG
Sbjct: 121 RVLSLNSILGSIQRRLDNIDRAISMGNRPDTLSSQSSSQTQHG 163

[Close]

BLAST of CmaCh09G007450 vs. TAIR 10
Match: AT1G79070.1 (SNARE-associated protein-related )

HSP 1 Score: 121.7 bits (304), Expect = 6.0e-28
Identity = 63/102 (61.76%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 71  ALANGLSSMLINIIRDFDSKADDTLKSQSQLSSSLDRITTELDQLLEDAPFPFIMQHASR 130
           A+A GLS+ML ++I+DFDSKA DTL SQ +LS SLDR+  ELDQLLE+AP PFI+QHASR
Sbjct: 36  AMARGLSAMLESVIKDFDSKALDTLNSQDELSGSLDRLVQELDQLLENAPLPFIVQHASR 95

Query: 131 ISSVRKRVLSLNSILRSIQRRLDNIDRAISMGNRPDTLSSQS 173
           ISSV++RV SLN +L+S+QRR+DNID  +S     +  SS++
Sbjct: 96  ISSVKQRVSSLNLVLKSVQRRIDNIDHMLSANTTQEKASSET 137

The following BLAST results are available for this feature:

BLAST of CmaCh09G007450 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh09G007450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IKP2	5.0e-75	100.00	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita maxim...	[more]
A0A6J1FEP4	9.8e-71	96.79	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch...	[more]
A0A6J1F9C2	1.2e-68	92.64	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch...	[more]
A0A6J1FIR1	5.8e-55	78.85	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Cucurbita mosch...	[more]
A0A6J1CN29	6.4e-54	77.56	Biogenesis of lysosome-related organelles complex 1 subunit 7 OS=Momordica chara...	[more]

BLAST of CmaCh09G007450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591843.1	3.8e-77	93.26	hypothetical protein SDJN03_14189, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022976873.1	1.0e-74	100.00	uncharacterized protein LOC111477110 [Cucurbita maxima] >XP_022976874.1 uncharac...	[more]
XP_023535159.1	1.6e-70	96.15	uncharacterized protein LOC111796673 [Cucurbita pepo subsp. pepo] >XP_023535160....	[more]
XP_022936774.1	2.0e-70	96.79	uncharacterized protein LOC111443260 isoform X2 [Cucurbita moschata] >XP_0229367...	[more]
XP_022936769.1	2.5e-68	92.64	uncharacterized protein LOC111443260 isoform X1 [Cucurbita moschata] >XP_0229367...	[more]

BLAST of CmaCh09G007450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79070.1	6.0e-28	61.76	SNARE-associated protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028119	Snapin/Pallidin/Snn1	PFAM	PF14712	Snapin_Pallidin	coord: 71..155 e-value: 2.1E-20 score: 72.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..179
IPR017246	Snapin	PANTHER	PTHR31305	SNARE-ASSOCIATED PROTEIN SNAPIN	coord: 30..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G007450.1	CmaCh09G007450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0031083	BLOC-1 complex