CmaCh09G007360 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G007360
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	serine/arginine-rich splicing factor SR45-like
Location	Cma_Chr09: 3500142 .. 3507709 (-)
RNA-Seq Expression	CmaCh09G007360
Synteny	CmaCh09G007360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCGACCATTTCTGTGTCGCTTTTCTCTTCAATATCTCTAAATCTCAAACGAAACGGGTTTAAGTTAGGGTTTCAAATTTCGCTCTGCAGCTATTGCCGGCCATGGCTAAACCAAGCAGAGGCCGTCGTTCGCCGCCGTCGGGTTCGGGATCCTCCTCACGTTCCCGCTCATACTCCGGCTCTGGTTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTATCACGAAGCGGTACTTCTCGAAGCCGAAGCCCCGCTCCTCAAAGAAAGAGGTTTGTCTTTCTTTTGAGCTTGCATTTTTCGTTCTGAGGTCTTGCATTTGGTGCTTATTGGTTGTCAGTGTGAGAGGAAGTATCGGAATTAGGTATTCTATGCTTGGGAGGTCGGTCGATTATGCATTTTCTTTTTTGTCGCTGTTGATTGGTTTTTCTTATATTTATTCGAAGGCATGTTTTGGAATCATTACGTTATCGAGAAACAGACGCGCTCCATATACCAAAAACAGTTTTTATGCGGTCATTGTATATCGCAATCACATCTTCATTTGTTTTTCAGTCCGAATGAAACAGCTCGGCGGACTCGCGCTTCATCTCCACTAGCTAAACGAATTTCTCCGCCACCCAGGTAATAATACCTCGTCTACAGTTAAATCCAACTTCTCATTTTTTATCATCTTATTGACATTTAAGCTCTTCATTATTTGTTCATGGCATGCATTTTCCGATAAGCTTCTTACATTTTTACTTTGGCGCGGTTTTTTATCCCGGCCTTTTGTTAAAGACTGCTTCCGAGCCTCTTCAATGGTTGTTTTTCTGCTGTTTGTTTAGTAAGTTACAAATTATGGATGACTAGGGAGCAATTTCGCTTTCAAAAGAAGGTCAAAGTTTAAACCAAAGGAGTTGAAAGAATCCAATTGGTCAAAAGTGTAGAGAGACCATAAGATTTATAAAGGAAGTGCATTTACACAAAGACGTTGTTTGGAAGATAATTTGCTTAAAATAATGATCAAAAGTGTTGTACTTGTCTTGAAAGAGATTATGGTTACGTTCATTCCATGTTGTCCACAAAAAAATCCGAAATGCATCCAAAGAACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCTCCCAAAAGAAAAATGTAACCTTCTTTGGATGGAAATCTGTCCATATCTCCTCAAAGAGAATGCGGATCTGTTTCGAACAAACTGAAAAACAAAGAAGATAAGATTTTGATGTATTTACCTCTTAAAAATCTGTCCATACTGTTTTTTGAACTTAAATATGGTTTAATATATTATTTTTTATTTTATTCTAAGAAGCTCATTCTTCCTTATCATTTAGTCAGTTAAAACATGGTTTGATTTAAATTCCTTGACTATTTATCCAAGCATTAAAAAAATCTTCAAATTCAATACTTTTTCAGAACTGTGGTGTTACTAGTTCATTATTTTCAACTTTTAATCATTTTTTGCCCTTGTTGAACTTAAATGTGATAAAGAATGTTCTATTAGCTTTAATTGTCTTACAACTAAATTTTATCTTAGTAATCTATAATCACTTACAAATGTATATGTAATTGACTATTTAAAAGCTGACATTTGCATTTTTTTAATACCAATATTTTCTTTATTTCTGCATCTGTATTATCAGCGATTTACATATGATGCTTTCATTTTGTGATAATTTCCTTGCCTGTCAGTTGTATTTATATAATTTGCTTATCACGCTGTCAATTGATTTCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGATCCACTGAGTAGGAATGTCCATGAGGGTCATTTAAAAGAAATCTTCAGTATGTTTTTTCACTCACTTTATTTAGCATTTAAACAATTATTCTGTTGGATAAATGCACTTATTTCTTCAGATTGTTCTTTTTTTAAAAGTTACAAGTAAAATTCATCAATTAAAACCGAAGAGTAAGACAAAAGAAAATCTTATTTCAACCTTCAATCACATTATGTGAAAGATACAACACTTTGACTTCATGAACCTAGTATTTTGTCTTACAAAAAAAGACTTTGTGTAAACGTATGTATTTATGTATTAGATTCAATTCAACCTAGCCTGTTTATTGGTAATGATCATTGACCGTGTTGTTTTGTCCTCAACAATTGAGTAATTTGTCTTATCAATTACTCTTCATCAGTGCATGCTCATTCCTTCCTTTCCTCTCGACTGTTTTGAAATTATAGACAGTTCCTTTTCATGAAATTTTTTTATCCTCATTCAATTGAAGTGATCCCCTTAAATATGATTTTTCCTCCAAAAGTCTCTATCTATTTAGTTAGGGTTGATGATATTGGATTGAATAGGTAATTTGTTATTTTATAAAAACATTGTAACTCTTATGAATTTCCTTTTTTTTTTTTTTTTTTTTTGATACCCTTTAGGTAATTTTGGTGAAGTAGTCCATGTTGAGCTGGCAATGGATCGCACAGTGAGTCCTTACCATGCATATTGTATTTGAAGAACTTTTTCTTGAATAATATATTGATGCATCTGTTTTAATATTTACAGGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACAAGACCTGATGCTGAAAAAGCCCAATTGCATATGGATGGTGTATGTTTTTCTTAAATGTTCAAGTACTTGAAGTACATCTATTGATAATTTCTCATAACTGGGAAATGATTGTGATGGTTGGCTGAATGTAGGCCCAAATTGATGGGAATGTTATTCGAACAAGATTTACATTGCCTCAAAGACAGAAGATCCCAACACCTCCAAGGACTGTAGCAACCGCTTCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTGCTGATGCTGAGAAGAATGACATGAAAAGACAGAGAGAACGTATAACTCTCAATTATTATATATTTTTCCATGTTCAACTGTTTTTGCCTATTATTCTATTCTATTTTTCATGAGGATATATTATTTTAGTGATTTATGTCTGCTTTGTCACGTCAGCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGACGCTCGCCTATTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCTCGCCGCCGTCCAGAGTCTCCTCCGCGTCGCCGCTTAGAATCTCCCCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCTCCATCGCCTTTGGCAAGGCGACATAGATCTCCTCCAAGGTTGACCATCATCCCCCCACTCTTCAACCCCCCAGCCTCACACATACACAATCTATCTCCTTTCCTGTAAATAGTGGGAGCATTAACATTGTTTAACTTCGGTTGAATAGGCCCTCTCCAAGAAGAATTCGTGACAGTCCTGTTCGAAGACGTTCACCACCCCCTCCTAGGCGCCGGTATTACACATTTGACTGTTCTGAGATATCATAGTATTTTTTCTTGCAGTTTATTTGAATGGTACACGGACATGTTTATTGTTTCTAACTTCACAAATCTTCATATAATGACAAGGTGAACTATTTATGACTTACTGCACGTGTTAAGTTTAATCGTATTGTTTCTGAGTTATAGAGTAAATGTCTGGAGATTAGTGAATTATGCAGGAGCATATGTTAATATCAATTTTTATTTTGAGCTTTTGTTTTTAGAGTGTGTTTCTTTTATTTTTAGATTTCCAGCTACATCAGGTATTTTGTAGAAGAATAAAAATTGCATCAGGTTTTGTTTAGTTGTGCGGTTTTTGTTTGCCATTGATCATTTTGTTATGCCTAGACACAGGTAACTGTGGTTTTTGGGTGATCCGAGCAAATTCAAAATAATGCTATTTCAGACTTAGAATTAAGTAGCAACCTGAGTTACTCTTGATGTAACTATTTAAAACTCTACTTGCTTCCATTATGGTACAAAGGTGTTCCTGTAGTTTAATCTTAGGCATTAGAAGAATGGTGACTGGTGACTGAGAAATTTAAGCATTTAAGCATATGGCAGTGGGAGCTTTTAATTGCTTGTTCACTATGGTTGACCCATGGTTTTTACTTGAAAATGATGTAGTCTGACTCAGTGGTCTCAGTTATGTTTTTGCTTAGGTATATGAGCGTTACTTAACTAAATTGTGTTTCTTTCAGTACACCGCCTCGACGTGCTCGTAGTCCTCCAAGAAGGTCTCCAGTAGTTCGCAGAAAGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATCTTCACCACGGAGGTAACTTGATGCCTAATGTTTTTTTTTTTTTTTTTGTCATGACCAACTGCCTTTAAAGAAAAAGATATTAGTATCTATGGATGCCTAATGAACTTTTTTTCATGATCAACTCCCTTTTAAAGAAAAATGATTTCATATTGTTTGCTTGTCCACTCTGTTTGTGGTGCATAAATTAAATGATGAAGTAGACACAGAAGTCCCTACCATTGGCATCGATCAAGAAAGGATAATAGTCATAATAAACCCATTCTGAACAGCCCCAAGTGAGGGCTATGAAACAAGTTCAAGATTCTCATCTTCTTTTCAATTGCAGTTTATTTGAAGCAAACTTAGACAGATGTCTGGTGTTGTGGTCTTGGGATTTTATATTACAACAGTCCTTCGAAACTAAGCTTAAACGATCTCAAGTTCCTATTTCTTACCTGAAACTTTGTATAGGAAATAATAATCTCCAAATTCCCCAAAAATGTATGTGCGTAATTGCCTATTAGTGGATAACACTTGTTTTGTATAGTTAGCTTTTAGAAAGGATGCGAATAATGTGCATCTGTAGTCATATTGCATGTTCCATTTGTAGGGATTTTGGTGTGAGAAGTCTTCTTCAATGGCTGGAAAGATCTTATTGTATTGTTTGGTCCGTTGTTAAATTCTATGTTTCTCTTTGAACTTTGGCTACTTGGTCAATTTGTAATAACTCGCTAGATCATATTTTATTGGAGTGAGACCCCTTTTTGTAGCTTGTTGCTTGCTTCATATTTCTTCTGGCCTTTTGTTTTGTATGTCCGTGTATTCTTATGGTTCTCTCTATACAGAGGTCAGCCTGCAGCCGCTGGTAGACGTGGGAGATCATCGTCCTACTCTGCATCACCTAGTCCACGCAAGGTTTGCTGTGATTGATCTTGCCATTTTTTTACCGCTCTGGGTTTATTATTGTTCGTTCTTCCTTGCATCCCGAGTGCCTTCATTGTTCTCTATTTTATATTACAGGTGCCCAGGAGAGTATATCGCAGTCCAAGAAGGTAACTCTGTGTATTTGATATTCCAAAAATGTTAGGAATTTTCGATATTCTTGGAGGCCAGTTTGCTGCCCAGTTTAAATCACTTGACTTTTGCCGTTTCTTTTTAACTAAAGACGAGTGTGTTTCCAAACCCATAAACCACAGGGAGCCACTGCAATTGGATTATTCTATATATCGAGCTTACAGATACTGAGTATAACAAGTCTGGAATCACTTCTGAAAGAAAGTACTTAAATACTTTTGAAGAAGTACTTAAATACTTTTGAAGTGTTTTTAAGTTATGTTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGCGTGGAAACCTCTCTCTAGTAAACGCGTGGAAACCTCTCTTAAAACCATGAGGCTGATGACAATATGTAACGGGCCAAAGCAGACAATATCTTATTATTACAACCATTATTATAATATATACATACATATTTAATTATGTTGTGCGATTGTTTGGTGTACAGGCCTTTAAGAGGGAGAAGCAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCCCGCAAGCCATAAGAACTCTACACATTTTGCGCCCTCTCACTCCCTAATTCTCTCTTGTTCTATCTGTGTATTCCAAAAGATGCGACATTGTTTCCCCACACCTGGTGAAGAGCCGAGCCTTCTTGTGGTGAAAATATTTGTGGATTAAATGCCATTCTGGGCTTGTCAGCAGTAGTTAGTTTCCTGTCACTATTGAATCAAACATTTTGATATCCTTGCTTCTAACTGCACTCTGTAGTATTATTACATTTCTTCTACTATACAAAGGCCCAGACGTGGAGTTCTCCCTTTTCTTATTCATTTTAGAGACATCCCCTCGTATTTTATGTCGGTCTAGTTTGTGTCTATTCGACTCTTGTGGGGTGGGGGGCACGGAAACAAGATGCCCGTCTTTAGGCTTTTGCTATCCTTTCTCGTGAAGAAGGTCTGCTCGCAACTTTAGAAAATGATTAATAAGTTTTTAACTGAATTTTTTATTTTATGATTCATAGGTATTTGGTTTACTCTAGGATTTCATGTCTGGTATATCTTGTGAGATTTTTTAGATAAAAAATTAAAAATCCAAAGATTAAATAGATGTTTTTGAAGTTTAGGAGTAAAAGTTGGGGTATATTAATTATTATTTATTTTTTTTAAAAAAATTTAGTTATATAGATGGAAATCTTGAATTTAGAAAAATTAACTTTTTCAGAATTGTTTTGGGTTTAAATCCATTTTAAACTTTTAGTTTGTTATATATATATATATATATATATATATATATATTTTTAGGAAAACTACGTCGTTTTAAAGGGAGAAAATACGAGTTCCAGATTTCTATATATGGTCTATTTTGCGGATATTTTTCATGATTTACAGAAAGCGCCATTTCGGACAGAAACGCACCAAATGGAAGGGGAGAAAAACGGCGCATACTTCTTGGTCAAATTGACTCTCTCAGATCGCTTTTCTCCTCGAACTCGAATTCTCATCTTCGTTTTAATAAATCTCTCTTTTTTTTTTTGGGCCCAAATCTCCTTCTATACCCTATAAAATATGTAATTTTTTCGAACTTTTTCAGCTTGATTTTGATCTTTCGCTCAGCTGCTGTCAGGAACACAGGGCAAGTGACTTGCTCCGGCGACTAAGGAATACTCGTCATATTCAGGTTCGTTTACTTGTTACTCGGTTTTTGGCGTCAATGTTTGGCCATGGATTTAGGGCTTTGAATTTGATCCAAACCCGACCTCCGGATGTTTCTCTAATTGATGGGTTCTGCTTGGTTTTACATTTTACAATCGATTCTCTTCTGCCTGTGTGACTTGGGGATTATACTGTTATTTGCCTCATGCTAATTCTACAAATGTTTCAATTGTAAATGGTTGATGAAAGGAAGCCTGAGTAGAAGTTTGTTTGAGTTGTGGATGCGAAAAATCATGTATGTTAAGAATATTGATTGTTCTTTTGGCATACTTAACTGTTCTTTTAAAGAGAAATGTTTAAACTCCACTGTGATTGTAATACATACTTCCATGAATTGGTATTTGTCTTTGCTGTCACTGATTGGGCTTTTTCGCTTGTTCTTGTGTATAGAATGAGCAGAGTTTCTTGAATTGA

mRNA sequence

GTTTCGACCATTTCTGTGTCGCTTTTCTCTTCAATATCTCTAAATCTCAAACGAAACGGGTTTAAGTTAGGGTTTCAAATTTCGCTCTGCAGCTATTGCCGGCCATGGCTAAACCAAGCAGAGGCCGTCGTTCGCCGCCGTCGGGTTCGGGATCCTCCTCACGTTCCCGCTCATACTCCGGCTCTGGTTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTATCACGAAGCGGTACTTCTCGAAGCCGAAGCCCCGCTCCTCAAAGAAAGAGTCCGAATGAAACAGCTCGGCGGACTCGCGCTTCATCTCCACTAGCTAAACGAATTTCTCCGCCACCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGATCCACTGAGTAGGAATGTCCATGAGGGTAATTTTGGTGAAGTAGTCCATGTTGAGCTGGCAATGGATCGCACAGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACAAGACCTGATGCTGAAAAAGCCCAATTGCATATGGATGGTGCCCAAATTGATGGGAATGTTATTCGAACAAGATTTACATTGCCTCAAAGACAGAAGATCCCAACACCTCCAAGGACTGTAGCAACCGCTTCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTGCTGATGCTGAGAAGAATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGACGCTCGCCTATTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCTCGCCGCCGTCCAGAGTCTCCTCCGCGTCGCCGCTTAGAATCTCCCCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCTCCATCGCCTTTGGCAAGGCGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGACAGTCCTGTTCGAAGACGTTCACCACCCCCTCCTAGGCGCCGTACACCGCCTCGACGTGCTCGTAGTCCTCCAAGAAGGTCTCCAGTAGTTCGCAGAAAGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATCTTCACCACGGAGGTGCCCAGGAGAGTATATCGCAGTCCAAGAAGGAGTAAAAGTTGGGAAAGCGCCATTTCGGACAGAAACGCACCAAATGGAAGGGGAGAAAAACGGCGCATACTTCTTGCTTGATTTTGATCTTTCGCTCAGCTGCTGTCAGGAACACAGGGCAAGTGACTTGCTCCGGCGACTAAGGAATACTCGTCATATTCAGAATGAGCAGAGTTTCTTGAATTGA

Coding sequence (CDS)

ATGGCTAAACCAAGCAGAGGCCGTCGTTCGCCGCCGTCGGGTTCGGGATCCTCCTCACGTTCCCGCTCATACTCCGGCTCTGGTTCCCGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTATCACGAAGCGGTACTTCTCGAAGCCGAAGCCCCGCTCCTCAAAGAAAGAGTCCGAATGAAACAGCTCGGCGGACTCGCGCTTCATCTCCACTAGCTAAACGAATTTCTCCGCCACCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGATCCACTGAGTAGGAATGTCCATGAGGGTAATTTTGGTGAAGTAGTCCATGTTGAGCTGGCAATGGATCGCACAGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACAAGACCTGATGCTGAAAAAGCCCAATTGCATATGGATGGTGCCCAAATTGATGGGAATGTTATTCGAACAAGATTTACATTGCCTCAAAGACAGAAGATCCCAACACCTCCAAGGACTGTAGCAACCGCTTCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTGCTGATGCTGAGAAGAATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGACGCTCGCCTATTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCGATTCTCCTCGCCGCCGTCCAGAGTCTCCTCCGCGTCGCCGCTTAGAATCTCCCCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCTCCATCGCCTTTGGCAAGGCGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGACAGTCCTGTTCGAAGACGTTCACCACCCCCTCCTAGGCGCCGTACACCGCCTCGACGTGCTCGTAGTCCTCCAAGAAGGTCTCCAGTAGTTCGCAGAAAGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATCTTCACCACGGAGGTGCCCAGGAGAGTATATCGCAGTCCAAGAAGGAGTAAAAGTTGGGAAAGCGCCATTTCGGACAGAAACGCACCAAATGGAAGGGGAGAAAAACGGCGCATACTTCTTGCTTGATTTTGATCTTTCGCTCAGCTGCTGTCAGGAACACAGGGCAAGTGACTTGCTCCGGCGACTAAGGAATACTCGTCATATTCAGAATGAGCAGAGTTTCTTGAATTGA

Protein sequence

MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHEGNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRRCPGEYIAVQEGVKVGKAPFRTETHQMEGEKNGAYFLLDFDLSLSCCQEHRASDLLRRLRNTRHIQNEQSFLN

Homology

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BLAST of CmaCh09G007360 vs. ExPASy Swiss-Prot
Match: Q9SEE9 (Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR45 PE=1 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 6.5e-86
Identity = 239/366 (65.30%), Postives = 274/366 (74.86%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRS PS SGSSSRS S S SGS       S S S+SRSRSRSRS+SSSSS SR
Sbjct: 1   MAKPSRGRRS-PSVSGSSSRSSSRSRSGS-------SPSRSISRSRSRSRSLSSSSSPSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           S +S SRSP  + KSP   ARR R+  P   + +  P K + V+ESLVLH+D LSRNV+E
Sbjct: 61  SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRNVNE 120

Query: 121 -------GNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
                  GNFGEV+HVE+AMDR VNLP+G+GYVEFK R DAEKAQL+MDGAQIDG V++ 
Sbjct: 121 AHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKN-DMKRQREPSPRRKPP-SPRRR 240
            FTLP RQK+ +PP+ V+ A KRD PK +N  ADAEK+   +R RE SP+RK   SPRRR
Sbjct: 181 TFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSPRRR 240

Query: 241 SPIARRGGSPRRQ-PDSP-RRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPP 300
           SP+ RRG SPRR+ PDSP RRRP SP RRR ++PPRRRPASP RG    SP  RR+RSPP
Sbjct: 241 SPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPP 300

Query: 301 RPSPRRIRDSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSS 355
           R SPRRIR SPVRRRSP P RRR+ PPRR RSPPRRSP +RR+SRSPIRRP RSRS S S
Sbjct: 301 RGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGRSRSSSIS 356

[Close]

BLAST of CmaCh09G007360 vs. ExPASy Swiss-Prot
Match: Q28E41 (RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis OX=8364 GN=rnps1 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.1e-15
Identity = 106/261 (40.61%), Postives = 135/261 (51.72%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGTS 64
           +R RRS  SGS SSSRSRS S S S S S S S S S S S S SRS SSSSS S S +S
Sbjct: 64  ARKRRSASSGSSSSSRSRSSSSSSSSSGSSSGSSSGSSSSSAS-SRSGSSSSSRSSSSSS 123

Query: 65  RSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE---- 124
            S SP+P R+  ++  RR+R+ S   KR     ++ SP      +HI  L+RNV +    
Sbjct: 124 SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 183

Query: 125 ---GNFGEVVHVELAMDR-TVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 184
                +G++  +++ +DR   +L KGY YVEF+   +AEKA  HMDG QIDG  I     
Sbjct: 184 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 243

Query: 185 L---PQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 244
           L   P R      PR  +   +   P P           M R+  P  RR+  SPRRRSP
Sbjct: 244 LTPWPMR----AMPRRFSPPRRMLPPPP-----------MWRRSPPRMRRRSRSPRRRSP 303

Query: 245 IARRGGSPRRQPDSPRRRPES 255
           + RR  SP R+    R    S
Sbjct: 304 VRRRSRSPARRRHRSRSSSNS 307

[Close]

BLAST of CmaCh09G007360 vs. ExPASy Swiss-Prot
Match: Q3KPW1 (RNA-binding protein with serine-rich domain 1-B OS=Xenopus laevis OX=8355 GN=rnps1-b PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.3e-14
Identity = 104/261 (39.85%), Postives = 136/261 (52.11%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGTS 64
           ++ RRS  SGS SSSRSR  S S S SSS S S S+S S S + SRS SSSSS S S +S
Sbjct: 39  AKKRRSASSGSSSSSRSR--SSSSSSSSSGSSSGSSSGSSSSASSRSGSSSSSRSSSSSS 98

Query: 65  RSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE---- 124
            S SP+P R+  ++  RR+R+ S   KR     ++ SP      +HI  L+RNV +    
Sbjct: 99  SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 158

Query: 125 ---GNFGEVVHVELAMDR-TVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 184
                +G++  +++ +DR   +L KGY YVEF+   +AEKA  HMDG QIDG  I     
Sbjct: 159 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 218

Query: 185 L---PQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 244
           L   P R      PR  +   +   P P           M R+  P  RR+  SPRRRSP
Sbjct: 219 LTPWPMR----AMPRRFSPPRRMLPPPP-----------MWRRSPPRMRRRSRSPRRRSP 278

Query: 245 IARRGGSPRRQPDSPRRRPES 255
           + RR  SP R+    R    S
Sbjct: 279 VRRRSRSPARRRHRSRSSSNS 281

[Close]

BLAST of CmaCh09G007360 vs. ExPASy Swiss-Prot
Match: Q5XG24 (RNA-binding protein with serine-rich domain 1-A OS=Xenopus laevis OX=8355 GN=rnps1-a PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.7e-14
Identity = 103/258 (39.92%), Postives = 135/258 (52.33%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGTS 64
           ++ RRS  SGS SSS SR  S S S SSS S S S+S S S + SRS SSSSS S S +S
Sbjct: 39  AKKRRSGSSGSSSSSHSR--SSSSSSSSSGSSSGSSSGSSSSASSRSGSSSSSRSSSSSS 98

Query: 65  RSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE---- 124
            S SP+P R+  ++  RR+R+ S   KR     ++ SP      +HI  L+RNV +    
Sbjct: 99  SSGSPSPSRRR-HDNRRRSRSKSKQPKRDEKERKRRSPSPRPTKVHIGRLTRNVTKDHIL 158

Query: 125 ---GNFGEVVHVELAMDR-TVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 184
                +G++  +++ +DR   +L KGY YVEF+   +AEKA  HMDG QIDG  I     
Sbjct: 159 EIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKHMDGGQIDGQEITASAV 218

Query: 185 LPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIAR 244
           L      P P R   +  +R  P P           M R+  P  RR+  SPRRRSP+ R
Sbjct: 219 LTPWPMRPMPRR--FSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPVRR 278

Query: 245 RGGSPRRQPDSPRRRPES 255
           R  SP R+    R    S
Sbjct: 279 RSRSPARRRHRSRSSSNS 281

[Close]

BLAST of CmaCh09G007360 vs. ExPASy Swiss-Prot
Match: Q6PG31 (RNA-binding protein with serine-rich domain 1 OS=Danio rerio OX=7955 GN=rnps1 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 8.6e-14
Identity = 105/258 (40.70%), Postives = 136/258 (52.71%), Query Frame = 0


Query: 6   RGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGTSR 65
           R RRS  +GS SSSRS S S S S SSS S S S+S S S   SRS SSSSS S S +  
Sbjct: 40  RKRRSNSTGS-SSSRSSSSSSSSSGSSSGSSSGSSSSSGS---SRSGSSSSSRSSSSSGS 99

Query: 66  SRSPAPQRKSPNETARRTRASSPLAKRISPPPRK-PSPVRESLVLHIDPLSRNVHE---- 125
           S SP+P R+  ++  RR+R+ S   KR     RK  SP  +   L++  L+RNV +    
Sbjct: 100 SGSPSPSRRR-HDNRRRSRSKSKSQKRTDEKERKRRSPSPKPTKLYLGRLTRNVTKDHIQ 159

Query: 126 ---GNFGEVVHVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 185
                +G++  +++  DR   N+ KGY YVE+++  DA+KA  HMDG QIDG  I     
Sbjct: 160 EIFATYGKIKMIDMPSDRLHPNVSKGYAYVEYESPEDAQKALKHMDGGQIDGQEITATAI 219

Query: 186 LPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIAR 245
           L QR  I   PR ++   +   P P           M R+  P  RR+  SPRRRSP+ R
Sbjct: 220 LAQR--IRPAPRRLSPPRRMPPPPP-----------MWRRTPPRMRRRSRSPRRRSPVRR 277

Query: 246 RGGSPRRQPDSPRRRPES 255
           R  S  R P   R R  S
Sbjct: 280 RSRS--RSPGRRRHRSRS 277

[Close]

BLAST of CmaCh09G007360 vs. ExPASy TrEMBL
Match: A0A6J1IN70 (serine/arginine-rich splicing factor SR45-like OS=Cucurbita maxima OX=3661 GN=LOC111477064 PE=4 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 1.6e-167
Identity = 351/358 (98.04%), Postives = 351/358 (98.04%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE
Sbjct: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR 352
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR 358

[Close]

BLAST of CmaCh09G007360 vs. ExPASy TrEMBL
Match: A0A6J1FEP9 (serine/arginine-rich splicing factor SR45-like OS=Cucurbita moschata OX=3662 GN=LOC111443390 PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 3.7e-161
Identity = 343/358 (95.81%), Postives = 345/358 (96.37%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSG SSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSG-SSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SG+SRSRSPAPQRKSPNETARRTRAS P AKRISPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATA KRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRG RSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGCRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR 352
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRSSSPRR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRR 357

[Close]

BLAST of CmaCh09G007360 vs. ExPASy TrEMBL
Match: A0A0A0KZM9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 8.6e-150
Identity = 324/365 (88.77%), Postives = 336/365 (92.05%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGS SSSRSRS+SGS SRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSASSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SG+SRSRSP PQRKSP ETARR+RAS P AKR SPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGSSRSRSPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVV+VELAMDRTVNLPKGYGYVEFKTR DAEKAQ++MDGAQIDGNVIR 
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQK+PTPPRTVAT  KRDGPKPENVG DAEK+DMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLES-------PPRRRPASPMRGGRSPSPLARRHR 300
           +ARRGGSPRRQPDSPRRRP+SPPRRR+ES       PPRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPDSPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRS 352
           SPPRPSPRRIR SPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

[Close]

BLAST of CmaCh09G007360 vs. ExPASy TrEMBL
Match: A0A1S3CPA3 (serine/arginine-rich splicing factor SR45 OS=Cucumis melo OX=3656 GN=LOC103503047 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 7.3e-149
Identity = 324/365 (88.77%), Postives = 336/365 (92.05%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRS+SGS SRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SG+SRSR+P PQRKSP ETARR+RAS P AKR SPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGSSRSRTPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVV+VELAMDRTVNLPKGYGYVEFKTR DAEKAQ++MDGAQIDGNVIR 
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQK+PTPPRTVAT SKRDGPKPENVG DAEK+DMKRQRE SPRRK PSPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVSKRDGPKPENVGPDAEKDDMKRQRESSPRRKLPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLES-------PPRRRPASPMRGGRSPSPLARRHR 300
           +ARRGGSPRRQPDSPRRRPESPPRRR+ES       PPRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRS 352
           SPPRPSPRRIR SPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

[Close]

BLAST of CmaCh09G007360 vs. ExPASy TrEMBL
Match: A0A5D3CC44 (Serine/arginine-rich splicing factor SR45 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00590 PE=4 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 1.5e-146
Identity = 324/385 (84.16%), Postives = 336/385 (87.27%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRS+SGS SRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRK---------------------------SPNETARRTRASSPLAKRI 120
           SG+SRSR+P PQRK                           SP ETARR+RAS P AKR 
Sbjct: 61  SGSSRSRTPPPQRKRFAFHFSLHFSFWSFTFRACVRGSIRISPTETARRSRASPPPAKRS 120

Query: 121 SPPPRKPSPVRESLVLHIDPLSRNVHEGNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPD 180
           SPPPRKPSPVRESLVLHID LSRNVHEGNFGEVV+VELAMDRTVNLPKGYGYVEFKTR D
Sbjct: 121 SPPPRKPSPVRESLVLHIDALSRNVHEGNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSD 180

Query: 181 AEKAQLHMDGAQIDGNVIRTRFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDM 240
           AEKAQ++MDGAQIDGNVIR RFTLPQRQK+PTPPRTVAT SKRDGPKPENVG DAEK+DM
Sbjct: 181 AEKAQVYMDGAQIDGNVIRARFTLPQRQKMPTPPRTVATVSKRDGPKPENVGPDAEKDDM 240

Query: 241 KRQREPSPRRKPPSPRRRSPIARRGGSPRRQPDSPRRRPESPPRRRLES-------PPRR 300
           KRQRE SPRRK PSPRRRSP+ARRGGSPRRQPDSPRRRPESPPRRR+ES       PPRR
Sbjct: 241 KRQRESSPRRKLPSPRRRSPVARRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPPRR 300

Query: 301 RPASPMRGGRSPSPLARRHRSPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSP 352
           RPASPMRGGRSPSPLARRHRSPPRPSPRRIR SPVRRRSPPPPRRRTPPRRARSPPRRSP
Sbjct: 301 RPASPMRGGRSPSPLARRHRSPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSP 360

[Close]

BLAST of CmaCh09G007360 vs. NCBI nr
Match: XP_022976788.1 (serine/arginine-rich splicing factor SR45-like [Cucurbita maxima])

HSP 1 Score: 599.0 bits (1543), Expect = 3.2e-167
Identity = 351/358 (98.04%), Postives = 351/358 (98.04%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE
Sbjct: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR 352
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR 358

[Close]

BLAST of CmaCh09G007360 vs. NCBI nr
Match: KAG7024701.1 (RNA-binding protein with serine-rich domain 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 590.9 bits (1522), Expect = 8.8e-165
Identity = 344/351 (98.01%), Postives = 346/351 (98.58%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSYSGSGS SSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SG+SRSRSPAPQRKSPNETARRTRAS P AKRISPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFTLPQR 180
           GNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFTLPQR
Sbjct: 121 GNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFTLPQR 180

Query: 181 QKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIARRGGS 240
           QKIPTPPRTVATA KRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIARRGGS
Sbjct: 181 QKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIARRGGS 240

Query: 241 PRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRDSP 300
           PRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRDSP
Sbjct: 241 PRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRDSP 300

Query: 301 VRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR 352
           VRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRSSSPRR
Sbjct: 301 VRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRR 351

[Close]

BLAST of CmaCh09G007360 vs. NCBI nr
Match: XP_023536426.1 (serine/arginine-rich splicing factor SR45-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 585.1 bits (1507), Expect = 4.8e-163
Identity = 344/358 (96.09%), Postives = 346/358 (96.65%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRS+SISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSKSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SGTSRSRSP PQRKSPNETARRTRAS P AKRISPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGTSRSRSPPPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATA KRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR 352
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRSSSPRR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRR 358

[Close]

BLAST of CmaCh09G007360 vs. NCBI nr
Match: KAG6591837.1 (Serine/arginine-rich splicing factor SR45, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 582.0 bits (1499), Expect = 4.1e-162
Identity = 343/358 (95.81%), Postives = 346/358 (96.65%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSYSGSGS SSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SG+SRSRSPAPQRKSPNETARRTRAS P AKRISPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATA KRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQP+SPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR 352
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRSSSPRR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRR 358

[Close]

BLAST of CmaCh09G007360 vs. NCBI nr
Match: XP_022936958.1 (serine/arginine-rich splicing factor SR45-like [Cucurbita moschata])

HSP 1 Score: 577.8 bits (1488), Expect = 7.7e-161
Identity = 343/358 (95.81%), Postives = 345/358 (96.37%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSG SSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSG-SSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           SG+SRSRSPAPQRKSPNETARRTRAS P AKRISPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATA KRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRG RSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGCRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRR 352
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRSSSPRR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRR 357

[Close]

BLAST of CmaCh09G007360 vs. TAIR 10
Match: AT1G16610.3 (arginine/serine-rich 45 )

HSP 1 Score: 321.2 bits (822), Expect = 1.2e-87
Identity = 239/369 (64.77%), Postives = 276/369 (74.80%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRS PS SGSSSRS S S SGS       S S S+SRSRSRSRS+SSSSS SR
Sbjct: 1   MAKPSRGRRS-PSVSGSSSRSSSRSRSGS-------SPSRSISRSRSRSRSLSSSSSPSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           S +S SRSP  + KSP   ARR R+  P   + +  P K + V+ESLVLH+D LSRNV+E
Sbjct: 61  SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRNVNE 120

Query: 121 -------GNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
                  GNFGEV+HVE+AMDR VNLP+G+GYVEFK R DAEKAQL+MDGAQIDG V++ 
Sbjct: 121 AHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKN-DMKRQREPSPRRKPP-SPRRR 240
            FTLP RQK+ +PP+ V+ A KRD PK +N  ADAEK+   +R RE SP+RK   SPRRR
Sbjct: 181 TFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSPRRR 240

Query: 241 SPIARRGGSPRRQ-PDSP-RRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPP 300
           SP+ RRG SPRR+ PDSP RRRP SP RRR ++PPRRRPASP RG    SP  RR+RSPP
Sbjct: 241 SPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPP 300

Query: 301 RPSPRRIRDSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSS 358
           R SPRRIR SPVRRRSP P RRR+ PPRR RSPPRRSP +RR+SRSPIRRP RSRS S S
Sbjct: 301 RGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGRSRSSSIS 359

[Close]

BLAST of CmaCh09G007360 vs. TAIR 10
Match: AT1G16610.1 (arginine/serine-rich 45 )

HSP 1 Score: 319.3 bits (817), Expect = 4.6e-87
Identity = 239/366 (65.30%), Postives = 274/366 (74.86%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRS PS SGSSSRS S S SGS       S S S+SRSRSRSRS+SSSSS SR
Sbjct: 1   MAKPSRGRRS-PSVSGSSSRSSSRSRSGS-------SPSRSISRSRSRSRSLSSSSSPSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           S +S SRSP  + KSP   ARR R+  P   + +  P K + V+ESLVLH+D LSRNV+E
Sbjct: 61  SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRNVNE 120

Query: 121 -------GNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
                  GNFGEV+HVE+AMDR VNLP+G+GYVEFK R DAEKAQL+MDGAQIDG V++ 
Sbjct: 121 AHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKN-DMKRQREPSPRRKPP-SPRRR 240
            FTLP RQK+ +PP+ V+ A KRD PK +N  ADAEK+   +R RE SP+RK   SPRRR
Sbjct: 181 TFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSPRRR 240

Query: 241 SPIARRGGSPRRQ-PDSP-RRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPP 300
           SP+ RRG SPRR+ PDSP RRRP SP RRR ++PPRRRPASP RG    SP  RR+RSPP
Sbjct: 241 SPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPP 300

Query: 301 RPSPRRIRDSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSS 355
           R SPRRIR SPVRRRSP P RRR+ PPRR RSPPRRSP +RR+SRSPIRRP RSRS S S
Sbjct: 301 RGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGRSRSSSIS 356

[Close]

BLAST of CmaCh09G007360 vs. TAIR 10
Match: AT1G16610.2 (arginine/serine-rich 45 )

HSP 1 Score: 312.8 bits (800), Expect = 4.3e-85
Identity = 235/364 (64.56%), Postives = 270/364 (74.18%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRS PS SGSSSRS S S SGS       S S S+SRSRSRSRS+SSSSS SR
Sbjct: 1   MAKPSRGRRS-PSVSGSSSRSSSRSRSGS-------SPSRSISRSRSRSRSLSSSSSPSR 60

Query: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120
           S +S SRSP  + KSP   ARR R+  P   + +  P K + V+ESLVLH+D LSRNV+E
Sbjct: 61  SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRNVNE 120

Query: 121 -------GNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
                  GNFGEV+HVE+AMDR VNLP+G+GYVEFK R DAEKAQL+MDGAQIDG V++ 
Sbjct: 121 AHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKA 180

Query: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
            FTLP RQK+ +PP+ V+ A KRD PK +N  ADAEK+   R+    PR +  SPRRRSP
Sbjct: 181 TFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRR----PRER-LSPRRRSP 240

Query: 241 IARRGGSPRRQ-PDSP-RRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRP 300
           + RRG SPRR+ PDSP RRRP SP RRR ++PPRRRPASP RG    SP  RR+RSPPR 
Sbjct: 241 LPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPPRG 300

Query: 301 SPRRIRDSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPR 355
           SPRRIR SPVRRRSP P RRR+ PPRR RSPPRRSP +RR+SRSPIRRP RSRS S SPR
Sbjct: 301 SPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGRSRSSSISPR 349

[Close]

BLAST of CmaCh09G007360 vs. TAIR 10
Match: AT2G29210.1 (splicing factor PWI domain-containing protein )

HSP 1 Score: 56.2 bits (134), Expect = 7.3e-08
Identity = 78/183 (42.62%), Postives = 96/183 (52.46%), Query Frame = 0


Query: 178 PQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIARR 237
           P+R++I +P R+ + +  R   +P + G        +R+R PS    PP+ RRRSP    
Sbjct: 272 PRRRRIHSPFRSRSRSPIRRHRRPTHEGRRQSPAPSRRRRSPS----PPARRRRSP---- 331

Query: 238 GGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIR 297
                  P + RRR  SPP RR      R P  P R  RSPSP ARRHRSPP    RR  
Sbjct: 332 ------SPPARRRRSPSPPARR-----HRSPTPPARQRRSPSPPARRHRSPPPARRRRSP 391

Query: 298 DSPVRRR---SPPPPRRRTPP---RRARSPPRRSPVVRR-KSRSPIRRPARSRSRSSSPR 354
             P RRR   SPP  RRR+P    RR RSP   SP+ RR +SRSP+ +    R RS SP 
Sbjct: 392 SPPARRRRSPSPPARRRRSPSPLYRRNRSP---SPLYRRNRSRSPLAK----RGRSDSPG 428

The following BLAST results are available for this feature:

BLAST of CmaCh09G007360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEE9	6.5e-86	65.30	Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR4...	[more]
Q28E41	2.1e-15	40.61	RNA-binding protein with serine-rich domain 1 OS=Xenopus tropicalis OX=8364 GN=r...	[more]
Q3KPW1	1.3e-14	39.85	RNA-binding protein with serine-rich domain 1-B OS=Xenopus laevis OX=8355 GN=rnp...	[more]
Q5XG24	1.7e-14	39.92	RNA-binding protein with serine-rich domain 1-A OS=Xenopus laevis OX=8355 GN=rnp...	[more]
Q6PG31	8.6e-14	40.70	RNA-binding protein with serine-rich domain 1 OS=Danio rerio OX=7955 GN=rnps1 PE...	[more]

BLAST of CmaCh09G007360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IN70	1.6e-167	98.04	serine/arginine-rich splicing factor SR45-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1FEP9	3.7e-161	95.81	serine/arginine-rich splicing factor SR45-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0A0KZM9	8.6e-150	88.77	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV...	[more]
A0A1S3CPA3	7.3e-149	88.77	serine/arginine-rich splicing factor SR45 OS=Cucumis melo OX=3656 GN=LOC10350304...	[more]
A0A5D3CC44	1.5e-146	84.16	Serine/arginine-rich splicing factor SR45 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of CmaCh09G007360 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976788.1	3.2e-167	98.04	serine/arginine-rich splicing factor SR45-like [Cucurbita maxima]	[more]
KAG7024701.1	8.8e-165	98.01	RNA-binding protein with serine-rich domain 1 [Cucurbita argyrosperma subsp. arg...	[more]
XP_023536426.1	4.8e-163	96.09	serine/arginine-rich splicing factor SR45-like [Cucurbita pepo subsp. pepo]	[more]
KAG6591837.1	4.1e-162	95.81	Serine/arginine-rich splicing factor SR45, partial [Cucurbita argyrosperma subsp...	[more]
XP_022936958.1	7.7e-161	95.81	serine/arginine-rich splicing factor SR45-like [Cucurbita moschata]	[more]

BLAST of CmaCh09G007360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16610.3	1.2e-87	64.77	arginine/serine-rich 45	[more]
AT1G16610.1	4.6e-87	65.30	arginine/serine-rich 45	[more]
AT1G16610.2	4.3e-85	64.56	arginine/serine-rich 45	[more]
AT2G29210.1	7.3e-08	42.62	splicing factor PWI domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 108..174 e-value: 7.9E-8 score: 42.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 122..172 e-value: 3.3E-9 score: 36.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 112..178 score: 11.178847
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 66..185 e-value: 2.1E-12 score: 49.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..84
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 200..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 306..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..354
None	No IPR available	PANTHER	PTHR15481	RIBONUCLEIC ACID BINDING PROTEIN S1	coord: 1..352
None	No IPR available	PANTHER	PTHR15481:SF9	BNAA09G56240D PROTEIN	coord: 1..352
IPR034201	RNPS1, RNA recognition motif	CDD	cd12365	RRM_RNPS1	coord: 109..174 e-value: 6.05957E-29 score: 106.101
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 95..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G007360.1	CmaCh09G007360.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding