CmaCh09G005280 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G005280
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Pentatricopeptide repeat-containing protein
Location	Cma_Chr09: 2342725 .. 2352844 (-)
RNA-Seq Expression	CmaCh09G005280
Synteny	CmaCh09G005280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTAGCTTCTCCTGTATCTTATCGGCACTTACAACCACCATTGGAGAAGATGCTATGGATCGTGTCATTCTCCTCTCGTCATTTGGTATGGAATCCATCCGACTCAATGAACGTATTTTCTTGTTCACTTCCTTCTCGCACGGCCGACGCTCGGCGTCGGATAGACTCTCCTCGGAGTCCCAATCTCAAACGGCTGACCTCTCGTGTCGTCAGACTCACCCGTCGGAAGCAGCTCCACCAGGTTTTGCTCGTTTCTGTTCTTTATTCACCTCAATCTACACTCATCTCGACTATTTGTTCGTAAGAATGTCAGAATAAATAAAAAAGGATTCCGAGTTTTGGTCATGTTATTGCTTGCTGTTGTATTCGAAGTTTCATTCTCACGCCGCTCCTTGATTAAGGCGAATTTGATAGTTTTCACTGTCATCTTCATTTTAAGTATCGGTAGTTCATGCGTTCTTATTGATTAAAACTATATAGTCTCACGTAACGGATTTGTGTGGAATAATATTTTCGACGTTAGAAATTAGTAGTTGCACGATAAGTGATGGTTTCCTTCGAAGTGTACATTCTCGGCATTTCGTGTTGGAGTTCATATTGTCATTTGCTTTCTTAGATATTTGAGGAAATCGAAATTGCCAAGAGACGTTATGGAAAGCTGAATACAATTGTTATGAATGCGGTCCTGGAAGCTTGTGTTCACTGCGGTGATATTGATTTAGCTCTGAGTACTTTTAATGAAATGTCAAAGCCAGGCAATTGTGGTTTAGACAACGTCAGTTATGGCACGCTATTAAAGGTACTTTATTGTAGCTAAACTATTATGAGTTTTGGATTCCTAATTGAGCTGTGTGGGAAATCCGTATTTGTGAGAATTATGTGGGAGAGTCGTGATTAGTTCTTGTTCCAGTTACGTCTTGGTCTTTTATTTGCCAGGGTTTGGGTGAAGCTCGCAAGATTGATGAAGCATTTCTATTACTTGAATCTGTGGAAGAAGGTACTGCTATTGGAAGTCCAACATTGTCCGCACCACTTATTTATGGTGTTCTAAATGCTTTAACCGAAGCAGGTCAGTTTCTACGATAGGTCACTTGTTAAACAGTTTTCTGTGCCGTTACTGTGCTTATCTAGGCTTCATGGATTAGAATAATGTCTTCAGTGTTTGAGGACTTAGTTTATGGTCAATTGATTTGTATTTACTTGAGATTAGTTAAGCTTTCTGGTGTAATATTTTTTCTTTTACTTATTTCGTCTACTGCTATTACTTATTCATTATCATTATAAATATGACCGTCCTCCACCTTAATTGATGGTAGTGAGCATTACACCTTCCTTTGTGTACTAGTTCTGATTCATTCATTCAAGTCTTGTTTTTTTAGTTAAGTCATTCAGCCTTAAATATTTGATACAAGTATATTAGTAGAATAAGTTTTATGTCAGCCACATTTTGTTGGAAATATGGAACACTTATAATCAGCATGCAATGAACGTAGCAGGTTGGGTTGGATGTCAGATTTGATCATGATATCTATGCCATTTATTCATATTTAAATATATTGCAGTGCAGTACAAAAGACTTCTAAATTCTTATAATTTTAATTTATGAGTTTGAACTGATCCCATATACATGGGCATGAATCAGACTAATATTCCTACTGTTTTTATTTTTAATTTTTAATTAAAACATATTGATTATCTCCAGAGGTCACTGTGTCGACTTGTGCAGATTTTTTTTAGGGTATATTTCTCTTTAACTTTTAATGATTGTATGATGCTTAATGATACCTTACAGAAGCTCAACTAGTTTTATCATAGTTTCTTTGATGATTGTTGAAGTTAAATGTTATGGAAGCAATGTTAGAATCAGATTTCGGGAATGGTTCAGCTCAAATGTTTATTATTATTATTATTATTATTTTGTTCGATGCATTTATTCTATCATGTTGATTTTTGTAGTGCAGGAGACATGCGCCGTGCCAATGGTCTAATAGCACGATATGGATTCTTACTTCATGAAGGAGGCAATCTCTCTATATCAGTTTACAACTTATTGATGAAGGTGTGCACACAGTTGTAGTTCTGCAAGATTATTACTAATGAGAAATAAAAATATTTGTTGCAATGTTTCAAATTATCAAAGTCTGACCTGGTGCTGCAATTGGAGATCCAGGATCCGGATTACACTGCTTAATAATTTTCTTCTCTTGGATTTTCAGGGGTACATAAGCTCAGGTGTTCCTCAAGCTGCTTTAGCTCTGTACAATGAGATGCTAAATCTGGAGTTGAAACCTGATAAGCTCACATATAATACATTAATCTCTGCTTGTGGGAAGATTAACAAACTGGACGCAGCAATGTATTTCTTTGAGGAAATGAAGGTCACGAACATGTGTTGAAAGGCCACTTTAGAGCCTCCAAATGTTTTTATTAGTTGGTTGAGGAATCAACCAGTGCTTATATTTTGTTCCTCACAATTTCATTCTTTACAGGAACGAGCTGGTAAGTATAATCAGGAAGATATTTTTCCTGATGTTGTGACGTACACTACTTTACTTAAGGTCGGTGAACTTTTCACCTGTTTTGCTTATCATGTAAATAGATTTATATTTTTCAAGTTGAATATGCTTAGGATTTATGGGTTTTGAATTATTTGAATAAAACTTTTAGGAGTGGACTCCTCTGAGTTAATTTTTTTGTGCCATATTTTTGCATCTCTGGGAAATGTTGTTGATTCTGGTAATATATAGTTTATGGGTGTATATATTGAAGTTTCCAGTCAAAGTGTCGGCTTGATGGATTTGGAAGCTTTTCTATGAACGATATTATTGATATGCAATCACTTTGACGAAGAGAAGCTCAGTCTTCGTAGAGGAAAATATAATCTCGAACAAGTTACTGCGAGAGTGATGCATAGACCTTCTTTGTTTTACCATATGACACTTTATCTGGAAATCTTCTTTAGTTACAATGGAAGCATGCAGTTCTTGTCCACGGAAAACATGCATCCAAATCAATTACTTTCTCATAGCCATAGGAGAATATTTACTCCCCCTCCCCCCATTCTGGTCTGACCCACAATAATTCTTGCATGTTCTAAAATTTCCTCGTGGGGTTCTAGGTTCTAGCTCATGTCAATAACTAGAGCTACAAGCTTGTGCATCTTGATTCACTTTTCTGACATAAACTTTCCACTCATTAATTAGTTTTTTTTTTTTTTTTTTTTTTTTTAGGGTTTTGGGATTCTGAAAGATGTCCGTCTTGTTCACAAAATTGTGCTGGAAATGAAGTCTTGTCATGATTTGTTGATTGATCGAACAGCATACACTGCAATGATTGATGCTTTGGTTAACTGTGGCTCTATAAACGGTATGATTTATACCCAACTAGTAATTGATGGGAAATTTTGGGATTGAATTGTACTGAGTAGACAATTTATCCATGGTAGCAGGTGCTCTTTCTTTATTTGGGGAATTATTGAAGCTTTCTGGATGGAATTTGGACTTGCGGCCAAAACCACATCTCTATCTCACTTTTATGAGATTTTTTTCCAGTAGAGGAGATTATAGGATGGTCAAATGTTTGCATAGACGCATGTGGCTGGACTCCTCTGGAAGTATTTCTCCTGGATTTCAAGAAGAGGCAGATCATCTTCTCATGGAGGCAGCTTTACATGACAATCAGGTACTACCGTTTACTTTTGAGTTTTAAATGTTTTTGGTGAACGTATGGTTTGTTGTTCCTTTTCTTCTTTTAGTGCTAAAAGTTTGCTACCTTTAAATTGTAGACCACAGCACATACATCCGAGTAGATAGAGATGGACTGTTGGTTGTTGTATAAGTTAATGAGCTAATACAATATTAGTTTGTCTAATTTACAATAGTTTATGCCACAATGAGATACAATATTAGTGTGTCTAATTTACAATAGTTTATGCCACAATGAGAGTCTGAATGGTAAAAAAAACAAGTACTTTACCTTATGTACTTGGTAAGATTTTAAGTGGCAAGTTATCAAAAGCCACCTGGAAGCAAAAATCTTCCTTTCATGAATTGTTTTTTGGTTGTTGGTGAATGCACAGTACATATATGGTCCTAATAAGAGTTTCCCTCTTGCCATTTCTCCAAATTGGTGTTTTATGTTCAGCTGTAAGGAAGAGTGGGAAAGTCTAGGCTGTCCGTCCGTTAATATTTTATGGAAGATCATAGACATTTTTGGTCCTTGTGCTTTCCATGGAATATAAGGAAGATTATTTGGAATCCTCTGGTGAGAACACGTTGGAGCTAACTAGTTCTTTGTGCTCTTTGTGGGCTTCTATTACCAACTTATTATTATTGTTATTATTTAGCATAATGGTTCCTTGCTTTAGTCAATCCAATTTGTTACTTTTTTGGTTGGCTCCATTGGATTTTCCATGAGTGGGAGGATATTTTATCTTTGCCACCTCTGAAATGTTTCTTTACAATCTTGATAAGATCCTGTTATTTTTAGAATCTGCAAACTTCCAAAATTGGTTAAATCTTCTTTCTTTTCTATAAAAATTTTATGGACTTTGTGATCTATGCTTGTCCTTTTCAGATTGATGTGGCAACAGAGAAATTATCAACAATTATTAAGAGATGGAAGGGAATCTCGTGGTCTAGCAGAGGAGGCAGTGTAAGTAGATATACCCTACTATCCTTAATTGTTGGGATAAAAAGTTTGCAATTTTGCAGCATGTACTTCCATTGTGAATGAATTTGAGGATATTTTCTCAATTCACCGTTTTTTCCACTCTCCGGAAAAAAATTATTTTATTTTATTTAGATCTGTGTGAACAATTATTACAAACTTCATTCTGGTTCTATTTTTTCATGTTTTGTTGGTGATAATCCCAAGGCCTTCTAAAGGCGTGACTCAGGGTAATTTATTTGGTCTCTCATAAACAAAAGAAGCCTAAGTTTCTTTTTAGTTCACCAGTTCAAAATTCATTTATGCACTTCTTCGGCTCTTCTATGCATATTAGCTTCTTGATGGACTTGACTTGAAGCTGATTATATGCTGTCTTAGAATTCAGACAATTTATAATACTATCTTATACTTTTAGAACTTCCAAGACGTCTATGGCCATGAGAAAATTTGCTTTTGAGCGGTCCAATGCTTGAAATGCTCGAACCTTTTTCCCTTCTCTGCATTTAAGCTTTGAAGCGCTAGTGTCTTTTATGAAACCCATTTTTATTCTATTAAGATAATATCTAATATTTATGTTTATTCTGACCCAGGTTGCTCTGCGTATTGAAGCATTGCTTGGACTCACCAAATCTTTCTTTAGTCCTTGCATATTTCCTCGGGTTTGAATTCTCTGATTTTACAGTGGTCTAGTTTATTTCATATCTTAAAGATGTCAAAGAAATGGATGCCGGTGATATAAATGCTAGGAATATTATTAGGGTATAGGGTTATTAGTAATTAGTTGGGAAGTTGTTATGGTGATTTGTTATAAATAGAGTGGGTAGGAAAGGTTGAAGGCATGCTTTGGTTTAGATGGTTTAGGCTTATGCGAACACGAGAGAGAGAGGATCAAACTACCTCGAATTACTTGGGTTATCTTTGGGATCTTTATCTTTCATATTTCAATACCATTTCAACTGTTTGGGTACTATCAGTGTTCTTATGCTAGTAAAGATGTTTGCATGCTTAACTGTGGACATTGTAAATGCTTAGCAGAAGCGTTTAATCATTCACTTCTGTAACTGTTAATGGATGTATTTAAACTTATAGTGGCAGGATGAGTTTTATTATGAAATTTCTAAATTGTAGAAAAGAGTAAACATGTTTTAGGACTTGAGTCCTAGATGTCTGCTATTACCATACATTTCAGTTAATTATTTAATCATATGGTAGTCTTCTCTTTAGTTTAATTGTACACATTCGTTCCAGGTAAATCCGGGTGCTCCTATTGAGAGTGTCATGATGCCATTTAAAGCCGTTCAGCCATTAAATGGAAGCTTACAGTTGAAGGAAGTGGTCATGCGTTTCTTTGACAAATCAGTTGTGCCTATCATAGACGACTGGGGTAGATGCATTGGACTATTGCACCGAGAAGACTGCTCTGAGGTGAGTGAGAATTTTTGTTGTCCATGTCGTTGGAGACAAATTACACCGTAGTGATAAAACTTTCTCTATAACTACACATGTTATGCTTATGTAATGACTATGTAATGACCCAAACTCACCGCTGGCAGATATTGTTCTCTTTGGGGTTTTCCTTTCAAGCTTCATCTAAAGGTTAATAAAACGTGTCTGCTAGGGAGAAGTTTCCACACCCTTATAAAAATTGTTTCGTTCCCTCCCCAACCAATGTGGAATCTCACAATCCCACCCCCTTTGGGGTCCAGCATCCTCGTTGCCACTCATTCCCTTCTCCAATCGATGTGGGATCTCCCAATCCACACCCCTTTAGAGCCCATCATCCTTGCTGGCACACCGCCTCGTGTCCACCCCCTTCAGGGCTTAACCTCCTCATTGGTACATCACCCGATGTCTGACTCTAATACCATTTGTAACGACCCAAACCCACCATTAATAGATATTGTCCTCTCTTCGGGCTTTCCCTCAAGGTTTTTAAAACGCATCTGCTAGGGAGAAATTTCCACACCCTTCCAAAGAAGGCTTCGTTGTCCTCCCCAACCGATGTGGAATCTCACGTTATAAATCAAAATGGCAGGAAAATTATACTCATTGTTTGACATGAAATCTTACAACATCTGTGTGCAATCACAATGGATGCTTGATTGAATAAGGCAGGCTTCCCAAGGAATATTTATGGATCATAGATCCTGTTTTTCACTCTCCGAAAATTCCTACAAATTGTAAAATTTTGTCAAAAAACCTTGTTAGTTAAGTTTATGAAGCTTATAACAAAACCTTCCGTGATAATGAAACCCAAGCTTTGATGGGCATGTGCAGCCTTCTAGTTATTGTGATCACGGGCTATTTGTTTGATTTTGATTAAGTGAAAGGCAAAGTTTTATACCATATACTACCTTGTATCTATTCTACGATCATTTAGCTGAATGATTGTGGATGTATATAAAAATTAGATACTTAATATTTGTTTATGGTGCAGTTGGAGGCTCCCCTTTGGACAATGATGAGAAGCCCTCCTCCCGGTGTTACGACTACAACATCGATCGGACATGTTGTGAATCTAATTCTACGAAAGAGGTACAAAATGATTATTATTGTAAGACATAGCAAGTTTAGCACATACGATAGCTCGAGTTCAAGGGCTGTAGGTGTTTTTACTATCGAGCAATTGTATGGCTTTATTTCTCCCATTCCCATGCAGCTTCAGCCAAACATTCCACATAGGACGTAGATGACAATAACACTCCACTTTTTAACTTAGCTTTACAGTAAATGTCTTTATGCGTATCTCTCCTTAGTTTTAGGTGCTGTGAGATAGTTTGAATGAACTTTTGAGCATTGTGTCTATTTTTTTCTTACCTTTAAAATGCTTCGACTTTGATGATAATATCCGTCCGTAACGGGCTAAAATAGACAATATCTACTAGTAGTGGGCTTGAGCTGTTACAAATGGTATCTAAGCTAGATTTCGAGCGGGGTGCTAGTGAGAACACTGGGCTCCTAAGGGGGTGGATTGTGAGATCCCACATCGGTTGGGGAGGGGAACGAAGCATCTTTATAAGAGTGTGGAAACCTCTCTCTAGTAGACTTGTTTTAAAACTGTGAGGCTGATTGACGGTAATACGTAACGGGCCAAAACGGACAATATCTACTAGCGGTGAGCTTGGGCTATTAGAGTAACCCCATACCATAGGGATGGACATCGGTTGCGTATAAATTTGATCATTCTTTTCAATCATGCCCGATCTCCATTTCCTCATCCTCGGTCTCATTTTCCTTTAGTGATTAGATCAATCAAAATCTCCCTTCTGCCTCGGTCTCATTCCTTTAGTGATTAGATCAATCAAAATCTCCCTTCTGCCTAATTCCATCTCTCTGATTATCATTTCAAGATGTTCAACTTTCATCTTCCTCACCTTCGATTTTCAAAAGTTACATTTTTGGAACTTATCACCCTAATTGTCATCAGATTTCGATAAACTCGATCTCGGTTTCTATTAATGGGATCTTGCAACTTACCTCATGTCTACCCATTCCTTCTCATAACTTCTTTGGTTTCAAGAATTAAACCCTCTGTGGGCTTCAGTTCTTGAAATGGTGACCTTTTCTTCACTTTCTTCTAGTCTTGCATTTGCTTTGGCAGGTTTAGGTCCACTTGCAGGCCACATTATTTACAACCAATAAATAATGTTGGTTGCCCCACCAACTGAAACCTTCAAACTTAATGAGCCATACAACCCAATCGAGAAAAAAAAAAAAAAAAAAAAAACTATAAACCCCAAAAGTCAACAAAAAAAATTGTTTAAATTCAAAAGTTATTAATGAGATAAATTACCAAATTTGGAAGTAAGTTAAAGCTCAATGGAAAGAGCTAAGCTTGGTGTTGAAGGGCATATAATATTGGACATCACTTTCCTCAAAGATAGTGGCAAAAAAATTATTGTGTTTTGAGAAATTCATTGTGAACATCTTTCCTCTCCTAACCCTTTCCCTCTCCATTGGGTAATATAAATCATGCTCAAGTGGACCATCACCCCTCCAAAAAAATTATGAATAAATGCTTTAAAATGGCAACAAAGTATGGTACAAGTAAGGTTGACATGTTCTTTGGTTCCATTTCCTTTATTTAATTAATGATATATTGTTTGTACAATTGTTTTACTTATTATGTTTCTTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAGAAAAAAAAGTGAGTTTTAAAATCCAACCTTTCCTTACATACAGAGTTATATTACTCTTACTTACTAGTACGAGCATAGTCGAATTATAATTGATATGTTTTTTTTTTCCTTGAGATTTGAGGTTTAAATTATCATTCGTTGAATTAAACCATCTTTTTAAAAAAACTATAGTTTATATTAAGACATAAAAAGAGAAAACAAAACGAAAACTCCCTATGAGGGATTATATTAAAATCAAATGCTATTTAATCCAAAAATTTAAAGGGCCAGATGTGTTTTTTAAACCATTAAAAAAATATTAACATGTGGGATTCTCTATAAGCCATATTTTTTAATTTTAACAATATCCAAATTCCTAATAAAATATGGCCCACACGGAGCGGGATACTGGGCCCTCTAGACCACTCGCTAAACGGGCCGCTGGGAGCCCATTATCGAGGCACCGAAATGACGCTTATGCCCCCAGTGGTGACAAAAACATCCTTCCGTTTCGTACACCTTTAAATTCCTACAATAATTCAACTGACACTGATACTGACACCGTACTGGAATCGCGTAATCAATGATGGTTGAAACTTGAACAACGTTCCTCAGCCGTCGATCATCAACTGTACAGAACACTCCGATCCGACGGCCGATATCGCAGAAGCCGCCATTTTCTTTGTTCTTGCTGCTGCAGAACGGCAACATTCCCGAGTCTTCCGCTGAGCTTCCAAGTATCCCTCAGTATATTTACACACTCGAAGTCTCCACCTGTTTTCCATTTCGGATCTTCTGTTCTTCCTTTCCTTCTCTCTTTCACCGCCATTCTTGCTCCGAAGTTGAAGAAAAGCGTCTTCAAAAAGATATCATTCGTTCTTTTGTCCCTAATTTTCTCGGAAGAAGGTGAAGTTCTTCTATTCTTCTTTACTTCTTTCGGTTTATTCTAATGTTCAATCTGGTTTGGTTTCTGAAGTTTTTCGAATTTTGTGAAGTTCTTTTGGTGTCTTCCTGATGGATTCTGTTATGCACTCTTCATTTTCCTTAAGAAGCCAACTACGAAAGATCCGAATGCTTTTTAGACGTCTAAATGAATTTTGGCTACTTCCTTTTGTTTGGTTTAATCATTTTAACTTTTTCCCGCCCTTCCATTTCTGTTGATTGAGATACATTGTAACTGGATTGCTGTTCATGTCTTTAGCTTGGAACAGGAACATTTCGTAGAAAACAATCGAGCAAAACAATACACTGAGATCCACCTATGA

mRNA sequence

ATGGTTAGCTTCTCCTGTATCTTATCGGCACTTACAACCACCATTGGAGAAGATGCTATGGATCGTGTCATTCTCCTCTCGTCATTTGGTATGGAATCCATCCGACTCAATGAACGTATTTTCTTGTTCACTTCCTTCTCGCACGGCCGACGCTCGGCGTCGGATAGACTCTCCTCGGAGTCCCAATCTCAAACGGCTGACCTCTCGTGTCGTCAGACTCACCCGTCGGAAGCAGCTCCACCAGATATTTGAGGAAATCGAAATTGCCAAGAGACGTTATGGAAAGCTGAATACAATTGTTATGAATGCGGTCCTGGAAGCTTGTGTTCACTGCGGTGATATTGATTTAGCTCTGAGTACTTTTAATGAAATGTCAAAGCCAGGCAATTGTGGTTTAGACAACGTCAGTTATGGCACGCTATTAAAGGGTTTGGGTGAAGCTCGCAAGATTGATGAAGCATTTCTATTACTTGAATCTGTGGAAGAAGGTACTGCTATTGGAAGTCCAACATTGTCCGCACCACTTATTTATGGTGTTCTAAATGCTTTAACCGAAGCAGGAGACATGCGCCGTGCCAATGGTCTAATAGCACGATATGGATTCTTACTTCATGAAGGAGGCAATCTCTCTATATCAGTTTACAACTTATTGATGAAGGGGTACATAAGCTCAGGTGTTCCTCAAGCTGCTTTAGCTCTGTACAATGAGATGCTAAATCTGGAGTTGAAACCTGATAAGCTCACATATAATACATTAATCTCTGCTTGTGGGAAGATTAACAAACTGGACGCAGCAATGTATTTCTTTGAGGAAATGAAGGAACGAGCTGGTAAGTATAATCAGGAAGATATTTTTCCTGATGTTGTGACGTACACTACTTTACTTAAGGGTTTTGGGATTCTGAAAGATGTCCGTCTTGTTCACAAAATTGTGCTGGAAATGAAGTCTTGTCATGATTTGTTGATTGATCGAACAGCATACACTGCAATGATTGATGCTTTGGTTAACTGTGGCTCTATAAACGGTGCTCTTTCTTTATTTGGGGAATTATTGAAGCTTTCTGGATGGAATTTGGACTTGCGGCCAAAACCACATCTCTATCTCACTTTTATGAGATTTTTTTCCAGTAGAGGAGATTATAGGATGGTCAAATGTTTGCATAGACGCATGTGGCTGGACTCCTCTGGAAGTATTTCTCCTGGATTTCAAGAAGAGGCAGATCATCTTCTCATGGAGGCAGCTTTACATGACAATCAGATTGATGTGGCAACAGAGAAATTATCAACAATTATTAAGAGATGGAAGGGAATCTCGTGGTCTAGCAGAGGAGGCAGTGTTGCTCTGCGTATTGAAGCATTGCTTGGACTCACCAAATCTTTCTTTAGTCCTTGCATATTTCCTCGGGTAAATCCGGGTGCTCCTATTGAGAGTGTCATGATGCCATTTAAAGCCGTTCAGCCATTAAATGGAAGCTTACAGTTGAAGGAAGTGGTCATGCGTTTCTTTGACAAATCAGTTGTGCCTATCATAGACGACTGGGGTAGATGCATTGGACTATTGCACCGAGAAGACTGCTCTGAGTTGGAGGCTCCCCTTTGGACAATGATGAGAAGCCCTCCTCCCGGTGTTACGACTACAACATCGATCGGACATGTTGTGAATCTAATTCTACGAAAGAGGTACAAAATGATTATTATTGTAAGACATAGCAAGTTTAGCACATACGATAGCTCGAGTTCAAGGGCTGTAGGTGTTTTTACTATCGAGCAATTGTATGGCTTTATTTCTCCCATTCCCATGCAGCTTCAGCCAAACATTCCACATAGGACCCGTCGATCATCAACTGTACAGAACACTCCGATCCGACGGCCGATATCGCAGAAGCCGCCATTTTCTTTGTTCTTGCTGCTGCAGAACGGCAACATTCCCGAGTCTTCCGCTGAGCTTCCAAGTATCCCTCAGTATATTTACACACTCGAAGTCTCCACCTGTTTTCCATTTCGGATCTTCTGTTCTTCCTTTCCTTCTCTCTTTCACCGCCATTCTTGCTCCGAAGTTGAAGAAAAGCGTCTTCAAAAAGATATCATTCGTTCTTTTGTCCCTAATTTTCTCGGAAGAAGCTTGGAACAGGAACATTTCGTAGAAAACAATCGAGCAAAACAATACACTGAGATCCACCTATGA

Coding sequence (CDS)

ATGCTATGGATCGTGTCATTCTCCTCTCGTCATTTGGTATGGAATCCATCCGACTCAATGAACGTATTTTCTTGTTCACTTCCTTCTCGCACGGCCGACGCTCGGCGTCGGATAGACTCTCCTCGGAGTCCCAATCTCAAACGGCTGACCTCTCGTGTCGTCAGACTCACCCGTCGGAAGCAGCTCCACCAGATATTTGAGGAAATCGAAATTGCCAAGAGACGTTATGGAAAGCTGAATACAATTGTTATGAATGCGGTCCTGGAAGCTTGTGTTCACTGCGGTGATATTGATTTAGCTCTGAGTACTTTTAATGAAATGTCAAAGCCAGGCAATTGTGGTTTAGACAACGTCAGTTATGGCACGCTATTAAAGGGTTTGGGTGAAGCTCGCAAGATTGATGAAGCATTTCTATTACTTGAATCTGTGGAAGAAGGTACTGCTATTGGAAGTCCAACATTGTCCGCACCACTTATTTATGGTGTTCTAAATGCTTTAACCGAAGCAGGAGACATGCGCCGTGCCAATGGTCTAATAGCACGATATGGATTCTTACTTCATGAAGGAGGCAATCTCTCTATATCAGTTTACAACTTATTGATGAAGGGGTACATAAGCTCAGGTGTTCCTCAAGCTGCTTTAGCTCTGTACAATGAGATGCTAAATCTGGAGTTGAAACCTGATAAGCTCACATATAATACATTAATCTCTGCTTGTGGGAAGATTAACAAACTGGACGCAGCAATGTATTTCTTTGAGGAAATGAAGGAACGAGCTGGTAAGTATAATCAGGAAGATATTTTTCCTGATGTTGTGACGTACACTACTTTACTTAAGGGTTTTGGGATTCTGAAAGATGTCCGTCTTGTTCACAAAATTGTGCTGGAAATGAAGTCTTGTCATGATTTGTTGATTGATCGAACAGCATACACTGCAATGATTGATGCTTTGGTTAACTGTGGCTCTATAAACGGTGCTCTTTCTTTATTTGGGGAATTATTGAAGCTTTCTGGATGGAATTTGGACTTGCGGCCAAAACCACATCTCTATCTCACTTTTATGAGATTTTTTTCCAGTAGAGGAGATTATAGGATGGTCAAATGTTTGCATAGACGCATGTGGCTGGACTCCTCTGGAAGTATTTCTCCTGGATTTCAAGAAGAGGCAGATCATCTTCTCATGGAGGCAGCTTTACATGACAATCAGATTGATGTGGCAACAGAGAAATTATCAACAATTATTAAGAGATGGAAGGGAATCTCGTGGTCTAGCAGAGGAGGCAGTGTTGCTCTGCGTATTGAAGCATTGCTTGGACTCACCAAATCTTTCTTTAGTCCTTGCATATTTCCTCGGGTAAATCCGGGTGCTCCTATTGAGAGTGTCATGATGCCATTTAAAGCCGTTCAGCCATTAAATGGAAGCTTACAGTTGAAGGAAGTGGTCATGCGTTTCTTTGACAAATCAGTTGTGCCTATCATAGACGACTGGGGTAGATGCATTGGACTATTGCACCGAGAAGACTGCTCTGAGTTGGAGGCTCCCCTTTGGACAATGATGAGAAGCCCTCCTCCCGGTGTTACGACTACAACATCGATCGGACATGTTGTGAATCTAATTCTACGAAAGAGGTACAAAATGATTATTATTGTAAGACATAGCAAGTTTAGCACATACGATAGCTCGAGTTCAAGGGCTGTAGGTGTTTTTACTATCGAGCAATTGTATGGCTTTATTTCTCCCATTCCCATGCAGCTTCAGCCAAACATTCCACATAGGACCCGTCGATCATCAACTGTACAGAACACTCCGATCCGACGGCCGATATCGCAGAAGCCGCCATTTTCTTTGTTCTTGCTGCTGCAGAACGGCAACATTCCCGAGTCTTCCGCTGAGCTTCCAAGTATCCCTCAGTATATTTACACACTCGAAGTCTCCACCTGTTTTCCATTTCGGATCTTCTGTTCTTCCTTTCCTTCTCTCTTTCACCGCCATTCTTGCTCCGAAGTTGAAGAAAAGCGTCTTCAAAAAGATATCATTCGTTCTTTTGTCCCTAATTTTCTCGGAAGAAGCTTGGAACAGGAACATTTCGTAGAAAACAATCGAGCAAAACAATACACTGAGATCCACCTATGA

Protein sequence

MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRKQLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSYGTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIARYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACGKINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSCHDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSRGDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGISWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEVVMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLILRKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRTRRSSTVQNTPIRRPISQKPPFSLFLLLQNGNIPESSAELPSIPQYIYTLEVSTCFPFRIFCSSFPSLFHRHSCSEVEEKRLQKDIIRSFVPNFLGRSLEQEHFVENNRAKQYTEIHL

Homology

[Close]

BLAST of CmaCh09G005280 vs. ExPASy Swiss-Prot
Match: Q8VYD6 (Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana OX=3702 GN=CBSPPR1 PE=2 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 8.7e-184
Identity = 330/553 (59.67%), Postives = 422/553 (76.31%), Query Frame = 0


Query: 24  SCS-LPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRKQLHQIFEEIEIAKRRYGKLNTI 83
           SCS +P+R    RR     R  NLK LTSR+V LTRR+QL QI EE+E AK+RYG+LNTI
Sbjct: 19  SCSFVPTRRCYPRRATPYSRRINLKPLTSRIVLLTRRRQLGQIVEEVEAAKKRYGRLNTI 78

Query: 84  VMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSYGTLLKGLGEARKIDEAFLLLES 143
           VMN+VLEACVHCG+IDLAL  F+EM++PG  G+D++SY T+LKGLG+AR+IDEAF +LE+
Sbjct: 79  VMNSVLEACVHCGNIDLALRMFHEMAEPGGIGVDSISYATILKGLGKARRIDEAFQMLET 138

Query: 144 VEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIARYGFLLHEGGNLSISVYNLLMK 203
           +E GTA G+P LS+ LIYG+L+AL  AGD+RRANGL+ARY  LL + G  S+ +YNLLMK
Sbjct: 139 IEYGTAAGTPKLSSSLIYGLLDALINAGDLRRANGLLARYDILLLDHGTPSVLIYNLLMK 198

Query: 204 GYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACGKINKLDAAMYFFEEMKERAGKY 263
           GY++S  PQAA+ L +EML L L+PD+LTYNTLI AC K   LDAAM FF +MKE+A +Y
Sbjct: 199 GYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEKAEEY 258

Query: 264 NQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSCHDLLIDRTAYTAMIDALVNCGS 323
             + + PDVVTYTTL+KGFG   D+  + +I LEMK C ++ IDRTA+TA++DA++ CGS
Sbjct: 259 YDDFLQPDVVTYTTLVKGFGDATDLLSLQEIFLEMKLCENVFIDRTAFTAVVDAMLKCGS 318

Query: 324 INGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSRGDYRMVKCLHRRMWLDSSGSIS 383
            +GAL +FGE+LK SG N  LRPKPHLYL+ MR F+ +GDY MV+ L+ R+W DSSGSIS
Sbjct: 319 TSGALCVFGEILKRSGANEVLRPKPHLYLSMMRAFAVQGDYGMVRNLYLRLWPDSSGSIS 378

Query: 384 PGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGISWSSRGGSVALRIEALLGLTKS 443
              Q+EAD+LLMEAAL+D Q+D A   L +I++RWK I W++ GG  A+R+E LLG +KS
Sbjct: 379 KAVQQEADNLLMEAALNDGQLDEALGILLSIVRRWKTIPWTTSGGMAAVRLETLLGFSKS 438

Query: 444 FFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEVVMRFFDKSVVPIIDDWGRCIGL 503
              P +  +V P  PIES+M+ F+A +PL G+LQLK V MRFF + VVPI+DD G CIGL
Sbjct: 439 ILRPHLLSKVIPSEPIESIMIRFEATRPLLGTLQLKNVAMRFFKEQVVPIVDDRGSCIGL 498

Query: 504 LHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLILRKRYKMIIIVRHSKFSTYDSSS 563
           LHREDC+ L+APL +MMRSPP  V+TTTSIG VV+L+L K+ KM+I+V    FS     S
Sbjct: 499 LHREDCNNLDAPLVSMMRSPPTCVSTTTSIGRVVDLVLEKKLKMVIVVHCGNFSG-SGYS 558

Query: 564 SRAVGVFTIEQLY 576
           S+AVG FT  QLY
Sbjct: 559 SKAVGAFTRAQLY 570

[Close]

BLAST of CmaCh09G005280 vs. ExPASy Swiss-Prot
Match: Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 3.3e-18
Identity = 73/255 (28.63%), Postives = 124/255 (48.63%), Query Frame = 0


Query: 80  NTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSYGTLLKGLGEARKIDEAFLL 139
           N    N ++      G+ID+AL+ F++M   G C  + V+Y TL+ G  + RKID+ F L
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKG-CLPNVVTYNTLIDGYCKLRKIDDGFKL 263

Query: 140 LESVE-EGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIARYGFLLHEGGNLSISVYN 199
           L S+  +G     P L +  +  V+N L   G M+  + ++     +   G +L    YN
Sbjct: 264 LRSMALKGL---EPNLISYNV--VINGLCREGRMKEVSFVLTE---MNRRGYSLDEVTYN 323

Query: 200 LLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACGKINKLDAAMYFFEEMKER 259
            L+KGY   G    AL ++ EML   L P  +TY +LI +  K   ++ AM F ++M+ R
Sbjct: 324 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 383

Query: 260 AGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSCHDLLIDRTAYTAMIDALV 319
                   + P+  TYTTL+ GF     +   ++++ EM   +        Y A+I+   
Sbjct: 384 G-------LCPNERTYTTLVDGFSQKGYMNEAYRVLREMND-NGFSPSVVTYNALINGHC 441

Query: 320 NCGSINGALSLFGEL 334
             G +  A+++  ++
Sbjct: 444 VTGKMEDAIAVLEDM 441

[Close]

BLAST of CmaCh09G005280 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 7.4e-18
Identity = 83/279 (29.75%), Postives = 134/279 (48.03%), Query Frame = 0


Query: 60  KQLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVS 119
           KQ+ + F+E++   R   + + I  N++L  C   G  + A + F+EM+       D  S
Sbjct: 321 KQVAKFFDEMQ---RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN-RRIEQDVFS 380

Query: 120 YGTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLI 179
           Y TLL  + +  ++D AF +L  +     + +    + +I G      +AG    A  L 
Sbjct: 381 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG----FAKAGRFDEALNL- 440

Query: 180 ARYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISAC 239
             +G + + G  L    YN L+  Y   G  + AL +  EM ++ +K D +TYN L+   
Sbjct: 441 --FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 500

Query: 240 GKINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGF---GILKDVRLVHKIVLE 299
           GK  K D     F EMK       +E + P+++TY+TL+ G+   G+ K+     +I  E
Sbjct: 501 GKQGKYDEVKKVFTEMK-------REHVLPNLLTYSTLIDGYSKGGLYKEAM---EIFRE 560

Query: 300 MKSCHDLLIDRTAYTAMIDALVNCGSINGALSLFGELLK 336
            KS   L  D   Y+A+IDAL   G +  A+SL  E+ K
Sbjct: 561 FKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577

[Close]

BLAST of CmaCh09G005280 vs. ExPASy Swiss-Prot
Match: Q9SZ52 (Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR3 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.7e-17
Identity = 78/302 (25.83%), Postives = 141/302 (46.69%), Query Frame = 0


Query: 85   NAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSYGTLLKGLGEARKIDEAFLLLESVE 144
            N +L+A    G ID     + EMS    C  + +++  ++ GL +A  +D+A  L   + 
Sbjct: 824  NFLLDAYGKSGKIDELFELYKEMS-THECEANTITHNIVISGLVKAGNVDDALDLYYDLM 883

Query: 145  EGTAIGSPTLSAPLIYG-VLNALTEAGDMRRANGLIARYGFLLHEGGNLSISVYNLLMKG 204
                  SPT      YG +++ L+++G +  A  L   +  +L  G   + ++YN+L+ G
Sbjct: 884  SDRDF-SPTACT---YGPLIDGLSKSGRLYEAKQL---FEGMLDYGCRPNCAIYNILING 943

Query: 205  YISSGVPQAALALYNEMLNLELKPDKLTYNTLISACGKINKLDAAMYFFEEMKERAGKYN 264
            +  +G   AA AL+  M+   ++PD  TY+ L+     + ++D  +++F+E+KE      
Sbjct: 944  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE------ 1003

Query: 265  QEDIFPDVVTYTTLLKGFGILKDVRLVHKIVL--EMKSCHDLLIDRTAYTAMIDALVNCG 324
               + PDVV Y  ++ G G  K  RL   +VL  EMK+   +  D   Y ++I  L   G
Sbjct: 1004 -SGLNPDVVCYNLIINGLG--KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1063

Query: 325  SINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSRGDYRMVKCLHRRMWLDSSGSI 384
             +  A  ++ E+ +       L P    +   +R +S  G       +++ M    +G  
Sbjct: 1064 MVEEAGKIYNEIQRAG-----LEPNVFTFNALIRGYSLSGKPEHAYAVYQTM---VTGGF 1100

[Close]

BLAST of CmaCh09G005280 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 6.3e-17
Identity = 99/441 (22.45%), Postives = 183/441 (41.50%), Query Frame = 0


Query: 36  RRIDSPRSPNLKRLTSRVVRLTRRKQLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCG 95
           R +++   P++    S V  + R        + +   + R  K +    + ++++    G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 96  DIDLALSTFNEMSKPGNCGLDNVSYGTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLS 155
            ID A+S F EM   G      V+Y +L++GL +A K ++  LLL+ +     +    + 
Sbjct: 243 CIDAAISLFKEMETKG-IKSSVVTYNSLVRGLCKAGKWNDGALLLKDM-----VSREIVP 302

Query: 156 APLIYGV-LNALTEAGDMRRANGLIARYGFLLHEGGNLSISVYNLLMKGYISSGVPQAAL 215
             + + V L+   + G ++ AN L   Y  ++  G + +I  YN LM GY        A 
Sbjct: 303 NVITFNVLLDVFVKEGKLQEANEL---YKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 362

Query: 216 ALYNEMLNLELKPDKLTYNTLISACGKINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTY 275
            + + M+  +  PD +T+ +LI     + ++D  M  F  + +R        +  + VTY
Sbjct: 363 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG-------LVANAVTY 422

Query: 276 TTLLKGFGILKDVRLVHKIVLEMKSCHDLLIDRTAYTAMIDALVNCGSINGALSLFGELL 335
           + L++GF     ++L  ++  EM S H +L D   Y  ++D L + G +  AL +F +L 
Sbjct: 423 SILVQGFCQSGKIKLAEELFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 482

Query: 336 KL-----------------------SGWNL-------DLRPKPHLYLTFMRFFSSRGDYR 395
           K                          WNL        ++P    Y   +     +G   
Sbjct: 483 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 542

Query: 396 MVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGISWSS 444
               L R+M  D +        +   + L+ A L D  +  + +    +I+  K   +S+
Sbjct: 543 EANILLRKMEEDGNAP-----NDCTYNTLIRAHLRDGDLTASAK----LIEEMKSCGFSA 597

[Close]

BLAST of CmaCh09G005280 vs. ExPASy TrEMBL
Match: A0A6J1ILI3 (pentatricopeptide repeat-containing protein At5g10690 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111476245 PE=4 SV=1)

HSP 1 Score: 1186.4 bits (3068), Expect = 0.0e+00
Identity = 593/593 (100.00%), Postives = 593/593 (100.00%), Query Frame = 0


Query: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60
           MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK
Sbjct: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60

Query: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120
           QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY
Sbjct: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120

Query: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180
           GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA
Sbjct: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180

Query: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240
           RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG
Sbjct: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240

Query: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300
           KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC
Sbjct: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300

Query: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360
           HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR
Sbjct: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360

Query: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420
           GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI
Sbjct: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420

Query: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480
           SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV
Sbjct: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480

Query: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540
           VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL
Sbjct: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540

Query: 541 RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRT 594
           RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRT
Sbjct: 541 RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRT 593

[Close]

BLAST of CmaCh09G005280 vs. ExPASy TrEMBL
Match: A0A6J1FEL4 (pentatricopeptide repeat-containing protein At5g10690 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443370 PE=4 SV=1)

HSP 1 Score: 1157.9 bits (2994), Expect = 0.0e+00
Identity = 579/593 (97.64%), Postives = 584/593 (98.48%), Query Frame = 0


Query: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60
           MLWIVSFSSRHL WNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK
Sbjct: 1   MLWIVSFSSRHLAWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60

Query: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120
           QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLAL TFNEMSKP NCGLDNVSY
Sbjct: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALRTFNEMSKPDNCGLDNVSY 120

Query: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180
           GTLLKGLGEARKIDEAF LLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA
Sbjct: 121 GTLLKGLGEARKIDEAFQLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180

Query: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240
           RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISAC 
Sbjct: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACV 240

Query: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300
           KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMK+C
Sbjct: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKTC 300

Query: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360
           HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGW LDLRPKPHLYLTFMRFFSSR
Sbjct: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWYLDLRPKPHLYLTFMRFFSSR 360

Query: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420
           GDY MVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI
Sbjct: 361 GDYTMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420

Query: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480
           SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNG+LQLKEV
Sbjct: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGNLQLKEV 480

Query: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540
           VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLW MMRSPPPGVTTTTSIGHVVNLIL
Sbjct: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWKMMRSPPPGVTTTTSIGHVVNLIL 540

Query: 541 RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRT 594
           RKRYKMIIIVR+SKFSTYDSSSSRAVGVFTIEQLYGFISP P+QLQPNIPH+T
Sbjct: 541 RKRYKMIIIVRYSKFSTYDSSSSRAVGVFTIEQLYGFISPFPIQLQPNIPHKT 593

[Close]

BLAST of CmaCh09G005280 vs. ExPASy TrEMBL
Match: A0A6J1IF33 (pentatricopeptide repeat-containing protein At5g10690 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111476245 PE=4 SV=1)

HSP 1 Score: 1089.7 bits (2817), Expect = 0.0e+00
Identity = 543/545 (99.63%), Postives = 545/545 (100.00%), Query Frame = 0


Query: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60
           MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK
Sbjct: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60

Query: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120
           QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY
Sbjct: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120

Query: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180
           GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA
Sbjct: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180

Query: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240
           RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG
Sbjct: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240

Query: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300
           KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC
Sbjct: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300

Query: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360
           HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR
Sbjct: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360

Query: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420
           GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI
Sbjct: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420

Query: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480
           SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV
Sbjct: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480

Query: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540
           VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL
Sbjct: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540

Query: 541 RKRYK 546
           RKR++
Sbjct: 541 RKRFR 545

[Close]

BLAST of CmaCh09G005280 vs. ExPASy TrEMBL
Match: A0A6J1F9Q1 (pentatricopeptide repeat-containing protein At5g10690 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443370 PE=4 SV=1)

HSP 1 Score: 1067.8 bits (2760), Expect = 2.0e-308
Identity = 533/545 (97.80%), Postives = 537/545 (98.53%), Query Frame = 0


Query: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60
           MLWIVSFSSRHL WNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK
Sbjct: 1   MLWIVSFSSRHLAWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60

Query: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120
           QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLAL TFNEMSKP NCGLDNVSY
Sbjct: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALRTFNEMSKPDNCGLDNVSY 120

Query: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180
           GTLLKGLGEARKIDEAF LLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA
Sbjct: 121 GTLLKGLGEARKIDEAFQLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180

Query: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240
           RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISAC 
Sbjct: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACV 240

Query: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300
           KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMK+C
Sbjct: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKTC 300

Query: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360
           HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGW LDLRPKPHLYLTFMRFFSSR
Sbjct: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWYLDLRPKPHLYLTFMRFFSSR 360

Query: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420
           GDY MVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI
Sbjct: 361 GDYTMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420

Query: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480
           SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNG+LQLKEV
Sbjct: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGNLQLKEV 480

Query: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540
           VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLW MMRSPPPGVTTTTSIGHVVNLIL
Sbjct: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWKMMRSPPPGVTTTTSIGHVVNLIL 540

Query: 541 RKRYK 546
           RKR++
Sbjct: 541 RKRFR 545

[Close]

BLAST of CmaCh09G005280 vs. ExPASy TrEMBL
Match: A0A1S3CQY3 (pentatricopeptide repeat-containing protein At5g10690 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103503754 PE=4 SV=1)

HSP 1 Score: 1048.5 bits (2710), Expect = 1.3e-302
Identity = 525/593 (88.53%), Postives = 554/593 (93.42%), Query Frame = 0


Query: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60
           ML I SFSSRHL    S+S NVFSCSLPSRTA +RR  DSPRSPNLKRLTSRVVRLTRRK
Sbjct: 1   MLPIASFSSRHLALYTSNSTNVFSCSLPSRTATSRRPRDSPRSPNLKRLTSRVVRLTRRK 60

Query: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120
           +LHQ+FEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLAL TFNEMSKP +CGLDNVSY
Sbjct: 61  RLHQVFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALRTFNEMSKPDSCGLDNVSY 120

Query: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180
           GTLLKGLGEARKIDEAF LLESVEEGTAIG PTLSAPLIYG+LNAL EAGDMRRANGLIA
Sbjct: 121 GTLLKGLGEARKIDEAFQLLESVEEGTAIGGPTLSAPLIYGLLNALIEAGDMRRANGLIA 180

Query: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240
           RYG+LL EGGNLSISVYNLLMKGYISSGVPQAALA+YNEMLNLELKPD+LTYNTLISAC 
Sbjct: 181 RYGYLLREGGNLSISVYNLLMKGYISSGVPQAALAMYNEMLNLELKPDRLTYNTLISACV 240

Query: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300
           KINKLDAAM+FFEEMKERA KY+QED+FPDVVTYTTLLK FGILKDV LVHKIVLEMKSC
Sbjct: 241 KINKLDAAMHFFEEMKERADKYDQEDVFPDVVTYTTLLKSFGILKDVHLVHKIVLEMKSC 300

Query: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360
           H L IDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNL+LRPKPHLYLT MR FSSR
Sbjct: 301 HGLSIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLELRPKPHLYLTLMRVFSSR 360

Query: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420
           GDYRMVKCLHRRMWLDSSG+IS G+QEEADHLLMEAAL+DNQIDVA EKLSTIIK+WKGI
Sbjct: 361 GDYRMVKCLHRRMWLDSSGTISLGYQEEADHLLMEAALNDNQIDVAIEKLSTIIKKWKGI 420

Query: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480
           SW+SRGGSVALRIEALLGLTKSFFSPCIFPRVN GAPIESVMMPFKAVQPLNGSL LKEV
Sbjct: 421 SWTSRGGSVALRIEALLGLTKSFFSPCIFPRVNLGAPIESVMMPFKAVQPLNGSLLLKEV 480

Query: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540
           VMRFFDKSVVPIIDDWGRCIGLLHREDC+EL+APLW MMRSPPPGVTTT  IGHV NLIL
Sbjct: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCTELDAPLWKMMRSPPPGVTTTALIGHVANLIL 540

Query: 541 RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRT 594
           +KRYKM+++VRHSKFS Y  SS RA+GVFTIEQLYGF+SPIPM  +PN+P +T
Sbjct: 541 QKRYKMVVVVRHSKFSMYYGSSLRALGVFTIEQLYGFMSPIPMPHRPNVPRKT 593

[Close]

BLAST of CmaCh09G005280 vs. NCBI nr
Match: XP_022975759.1 (pentatricopeptide repeat-containing protein At5g10690 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1186.4 bits (3068), Expect = 0.0e+00
Identity = 593/593 (100.00%), Postives = 593/593 (100.00%), Query Frame = 0


Query: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60
           MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK
Sbjct: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60

Query: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120
           QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY
Sbjct: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120

Query: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180
           GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA
Sbjct: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180

Query: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240
           RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG
Sbjct: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240

Query: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300
           KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC
Sbjct: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300

Query: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360
           HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR
Sbjct: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360

Query: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420
           GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI
Sbjct: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420

Query: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480
           SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV
Sbjct: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480

Query: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540
           VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL
Sbjct: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540

Query: 541 RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRT 594
           RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRT
Sbjct: 541 RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRT 593

[Close]

BLAST of CmaCh09G005280 vs. NCBI nr
Match: XP_023535821.1 (pentatricopeptide repeat-containing protein At5g10690 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1162.1 bits (3005), Expect = 0.0e+00
Identity = 581/593 (97.98%), Postives = 585/593 (98.65%), Query Frame = 0


Query: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60
           MLWI SFSSRHL WNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK
Sbjct: 1   MLWIASFSSRHLAWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60

Query: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120
           QLHQIFEEIEIAK+RYGKLNTIVMNAVLEACVHCGDIDLAL TFNEMSKP NCGLDNVSY
Sbjct: 61  QLHQIFEEIEIAKKRYGKLNTIVMNAVLEACVHCGDIDLALRTFNEMSKPDNCGLDNVSY 120

Query: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180
           GTLLKGLGEARKIDEAF LLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA
Sbjct: 121 GTLLKGLGEARKIDEAFQLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180

Query: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240
           RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISAC 
Sbjct: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACV 240

Query: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300
           KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKS 
Sbjct: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSS 300

Query: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360
           HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR
Sbjct: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360

Query: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420
           GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI
Sbjct: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420

Query: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480
           SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNG+LQLKEV
Sbjct: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGNLQLKEV 480

Query: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540
           VMRFFDKSVVPIIDDWGRCIGLLHREDCSELE+PLW MMRSPPPGVTTTTSIGHVVNLIL
Sbjct: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELESPLWKMMRSPPPGVTTTTSIGHVVNLIL 540

Query: 541 RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRT 594
           RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPH+T
Sbjct: 541 RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHKT 593

[Close]

BLAST of CmaCh09G005280 vs. NCBI nr
Match: XP_022936928.1 (pentatricopeptide repeat-containing protein At5g10690 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1157.9 bits (2994), Expect = 0.0e+00
Identity = 579/593 (97.64%), Postives = 584/593 (98.48%), Query Frame = 0


Query: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60
           MLWIVSFSSRHL WNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK
Sbjct: 1   MLWIVSFSSRHLAWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60

Query: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120
           QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLAL TFNEMSKP NCGLDNVSY
Sbjct: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALRTFNEMSKPDNCGLDNVSY 120

Query: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180
           GTLLKGLGEARKIDEAF LLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA
Sbjct: 121 GTLLKGLGEARKIDEAFQLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180

Query: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240
           RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISAC 
Sbjct: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACV 240

Query: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300
           KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMK+C
Sbjct: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKTC 300

Query: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360
           HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGW LDLRPKPHLYLTFMRFFSSR
Sbjct: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWYLDLRPKPHLYLTFMRFFSSR 360

Query: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420
           GDY MVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI
Sbjct: 361 GDYTMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420

Query: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480
           SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNG+LQLKEV
Sbjct: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGNLQLKEV 480

Query: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540
           VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLW MMRSPPPGVTTTTSIGHVVNLIL
Sbjct: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWKMMRSPPPGVTTTTSIGHVVNLIL 540

Query: 541 RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRT 594
           RKRYKMIIIVR+SKFSTYDSSSSRAVGVFTIEQLYGFISP P+QLQPNIPH+T
Sbjct: 541 RKRYKMIIIVRYSKFSTYDSSSSRAVGVFTIEQLYGFISPFPIQLQPNIPHKT 593

[Close]

BLAST of CmaCh09G005280 vs. NCBI nr
Match: KAG6591628.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1136.7 bits (2939), Expect = 0.0e+00
Identity = 593/710 (83.52%), Postives = 604/710 (85.07%), Query Frame = 0


Query: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60
           MLWIVSFSSRHL WNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK
Sbjct: 1   MLWIVSFSSRHLAWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60

Query: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120
           QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLAL TFNEMSKP NCGLDNVSY
Sbjct: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALRTFNEMSKPDNCGLDNVSY 120

Query: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180
           GTLLKGLGEARKIDEAF LLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA
Sbjct: 121 GTLLKGLGEARKIDEAFQLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180

Query: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240
           RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISAC 
Sbjct: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACV 240

Query: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300
           KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLV KIVLEMK+C
Sbjct: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVRKIVLEMKTC 300

Query: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360
           HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGW LDLRPKPHLYLTFMRFFSSR
Sbjct: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWYLDLRPKPHLYLTFMRFFSSR 360

Query: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420
           GDY MVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI
Sbjct: 361 GDYTMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420

Query: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480
           SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNG+LQLKEV
Sbjct: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGNLQLKEV 480

Query: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540
           VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLW MMRSPPPGVTTTTSIGHVVNLIL
Sbjct: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWKMMRSPPPGVTTTTSIGHVVNLIL 540

Query: 541 RKRYKMIIIVRHSKFSTYDSSSSRAVGVFTIEQLYGFISPIPMQLQPNIPHRTRRSSTVQ 600
           RK                                                  +RRSSTVQ
Sbjct: 541 RK--------------------------------------------------SRRSSTVQ 600

Query: 601 NTPIRRPISQKPPFSLFLLLQNGNIPESSAELPSIPQYIYTLEVSTCFPFRIFCSSFPSL 660
           N PIRRPISQKPPFSLFLLLQNG IP SSAELP                           
Sbjct: 601 NAPIRRPISQKPPFSLFLLLQNGTIPGSSAELP--------------------------- 624

Query: 661 FHRHSCSEVEEKRLQKDIIRSFVPNFLGRSLEQEHFVENNRAKQYTEIHL 711
                  ++++   +K +IRSFV NF  +   +EHFVENNRAKQYTEIHL
Sbjct: 661 ------MKLKKSVFEKLMIRSFVLNFFRK---KEHFVENNRAKQYTEIHL 624

[Close]

BLAST of CmaCh09G005280 vs. NCBI nr
Match: XP_022975761.1 (pentatricopeptide repeat-containing protein At5g10690 isoform X2 [Cucurbita maxima])

HSP 1 Score: 1089.7 bits (2817), Expect = 0.0e+00
Identity = 543/545 (99.63%), Postives = 545/545 (100.00%), Query Frame = 0


Query: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60
           MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK
Sbjct: 1   MLWIVSFSSRHLVWNPSDSMNVFSCSLPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRK 60

Query: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120
           QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY
Sbjct: 61  QLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSY 120

Query: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180
           GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA
Sbjct: 121 GTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIA 180

Query: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240
           RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG
Sbjct: 181 RYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACG 240

Query: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300
           KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC
Sbjct: 241 KINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSC 300

Query: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360
           HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR
Sbjct: 301 HDLLIDRTAYTAMIDALVNCGSINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSR 360

Query: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420
           GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI
Sbjct: 361 GDYRMVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGI 420

Query: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480
           SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV
Sbjct: 421 SWSSRGGSVALRIEALLGLTKSFFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEV 480

Query: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540
           VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL
Sbjct: 481 VMRFFDKSVVPIIDDWGRCIGLLHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLIL 540

Query: 541 RKRYK 546
           RKR++
Sbjct: 541 RKRFR 545

[Close]

BLAST of CmaCh09G005280 vs. TAIR 10
Match: AT5G10690.1 (pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protein )

HSP 1 Score: 645.2 bits (1663), Expect = 6.2e-185
Identity = 330/553 (59.67%), Postives = 422/553 (76.31%), Query Frame = 0


Query: 24  SCS-LPSRTADARRRIDSPRSPNLKRLTSRVVRLTRRKQLHQIFEEIEIAKRRYGKLNTI 83
           SCS +P+R    RR     R  NLK LTSR+V LTRR+QL QI EE+E AK+RYG+LNTI
Sbjct: 19  SCSFVPTRRCYPRRATPYSRRINLKPLTSRIVLLTRRRQLGQIVEEVEAAKKRYGRLNTI 78

Query: 84  VMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSYGTLLKGLGEARKIDEAFLLLES 143
           VMN+VLEACVHCG+IDLAL  F+EM++PG  G+D++SY T+LKGLG+AR+IDEAF +LE+
Sbjct: 79  VMNSVLEACVHCGNIDLALRMFHEMAEPGGIGVDSISYATILKGLGKARRIDEAFQMLET 138

Query: 144 VEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIARYGFLLHEGGNLSISVYNLLMK 203
           +E GTA G+P LS+ LIYG+L+AL  AGD+RRANGL+ARY  LL + G  S+ +YNLLMK
Sbjct: 139 IEYGTAAGTPKLSSSLIYGLLDALINAGDLRRANGLLARYDILLLDHGTPSVLIYNLLMK 198

Query: 204 GYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACGKINKLDAAMYFFEEMKERAGKY 263
           GY++S  PQAA+ L +EML L L+PD+LTYNTLI AC K   LDAAM FF +MKE+A +Y
Sbjct: 199 GYVNSESPQAAINLLDEMLRLRLEPDRLTYNTLIHACIKCGDLDAAMKFFNDMKEKAEEY 258

Query: 264 NQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSCHDLLIDRTAYTAMIDALVNCGS 323
             + + PDVVTYTTL+KGFG   D+  + +I LEMK C ++ IDRTA+TA++DA++ CGS
Sbjct: 259 YDDFLQPDVVTYTTLVKGFGDATDLLSLQEIFLEMKLCENVFIDRTAFTAVVDAMLKCGS 318

Query: 324 INGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSRGDYRMVKCLHRRMWLDSSGSIS 383
            +GAL +FGE+LK SG N  LRPKPHLYL+ MR F+ +GDY MV+ L+ R+W DSSGSIS
Sbjct: 319 TSGALCVFGEILKRSGANEVLRPKPHLYLSMMRAFAVQGDYGMVRNLYLRLWPDSSGSIS 378

Query: 384 PGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGISWSSRGGSVALRIEALLGLTKS 443
              Q+EAD+LLMEAAL+D Q+D A   L +I++RWK I W++ GG  A+R+E LLG +KS
Sbjct: 379 KAVQQEADNLLMEAALNDGQLDEALGILLSIVRRWKTIPWTTSGGMAAVRLETLLGFSKS 438

Query: 444 FFSPCIFPRVNPGAPIESVMMPFKAVQPLNGSLQLKEVVMRFFDKSVVPIIDDWGRCIGL 503
              P +  +V P  PIES+M+ F+A +PL G+LQLK V MRFF + VVPI+DD G CIGL
Sbjct: 439 ILRPHLLSKVIPSEPIESIMIRFEATRPLLGTLQLKNVAMRFFKEQVVPIVDDRGSCIGL 498

Query: 504 LHREDCSELEAPLWTMMRSPPPGVTTTTSIGHVVNLILRKRYKMIIIVRHSKFSTYDSSS 563
           LHREDC+ L+APL +MMRSPP  V+TTTSIG VV+L+L K+ KM+I+V    FS     S
Sbjct: 499 LHREDCNNLDAPLVSMMRSPPTCVSTTTSIGRVVDLVLEKKLKMVIVVHCGNFSG-SGYS 558

Query: 564 SRAVGVFTIEQLY 576
           S+AVG FT  QLY
Sbjct: 559 SKAVGAFTRAQLY 570

[Close]

BLAST of CmaCh09G005280 vs. TAIR 10
Match: AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 95.1 bits (235), Expect = 2.4e-19
Identity = 73/255 (28.63%), Postives = 124/255 (48.63%), Query Frame = 0


Query: 80  NTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSYGTLLKGLGEARKIDEAFLL 139
           N    N ++      G+ID+AL+ F++M   G C  + V+Y TL+ G  + RKID+ F L
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKMETKG-CLPNVVTYNTLIDGYCKLRKIDDGFKL 263

Query: 140 LESVE-EGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLIARYGFLLHEGGNLSISVYN 199
           L S+  +G     P L +  +  V+N L   G M+  + ++     +   G +L    YN
Sbjct: 264 LRSMALKGL---EPNLISYNV--VINGLCREGRMKEVSFVLTE---MNRRGYSLDEVTYN 323

Query: 200 LLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISACGKINKLDAAMYFFEEMKER 259
            L+KGY   G    AL ++ EML   L P  +TY +LI +  K   ++ AM F ++M+ R
Sbjct: 324 TLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVR 383

Query: 260 AGKYNQEDIFPDVVTYTTLLKGFGILKDVRLVHKIVLEMKSCHDLLIDRTAYTAMIDALV 319
                   + P+  TYTTL+ GF     +   ++++ EM   +        Y A+I+   
Sbjct: 384 G-------LCPNERTYTTLVDGFSQKGYMNEAYRVLREMND-NGFSPSVVTYNALINGHC 441

Query: 320 NCGSINGALSLFGEL 334
             G +  A+++  ++
Sbjct: 444 VTGKMEDAIAVLEDM 441

[Close]

BLAST of CmaCh09G005280 vs. TAIR 10
Match: AT2G31400.1 (genomes uncoupled 1 )

HSP 1 Score: 94.0 bits (232), Expect = 5.3e-19
Identity = 83/279 (29.75%), Postives = 134/279 (48.03%), Query Frame = 0


Query: 60  KQLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVS 119
           KQ+ + F+E++   R   + + I  N++L  C   G  + A + F+EM+       D  S
Sbjct: 321 KQVAKFFDEMQ---RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN-RRIEQDVFS 380

Query: 120 YGTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLSAPLIYGVLNALTEAGDMRRANGLI 179
           Y TLL  + +  ++D AF +L  +     + +    + +I G      +AG    A  L 
Sbjct: 381 YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDG----FAKAGRFDEALNL- 440

Query: 180 ARYGFLLHEGGNLSISVYNLLMKGYISSGVPQAALALYNEMLNLELKPDKLTYNTLISAC 239
             +G + + G  L    YN L+  Y   G  + AL +  EM ++ +K D +TYN L+   
Sbjct: 441 --FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 500

Query: 240 GKINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTYTTLLKGF---GILKDVRLVHKIVLE 299
           GK  K D     F EMK       +E + P+++TY+TL+ G+   G+ K+     +I  E
Sbjct: 501 GKQGKYDEVKKVFTEMK-------REHVLPNLLTYSTLIDGYSKGGLYKEAM---EIFRE 560

Query: 300 MKSCHDLLIDRTAYTAMIDALVNCGSINGALSLFGELLK 336
            KS   L  D   Y+A+IDAL   G +  A+SL  E+ K
Sbjct: 561 FKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTK 577

[Close]

BLAST of CmaCh09G005280 vs. TAIR 10
Match: AT4G31850.1 (proton gradient regulation 3 )

HSP 1 Score: 92.8 bits (229), Expect = 1.2e-18
Identity = 78/302 (25.83%), Postives = 141/302 (46.69%), Query Frame = 0


Query: 85   NAVLEACVHCGDIDLALSTFNEMSKPGNCGLDNVSYGTLLKGLGEARKIDEAFLLLESVE 144
            N +L+A    G ID     + EMS    C  + +++  ++ GL +A  +D+A  L   + 
Sbjct: 824  NFLLDAYGKSGKIDELFELYKEMS-THECEANTITHNIVISGLVKAGNVDDALDLYYDLM 883

Query: 145  EGTAIGSPTLSAPLIYG-VLNALTEAGDMRRANGLIARYGFLLHEGGNLSISVYNLLMKG 204
                  SPT      YG +++ L+++G +  A  L   +  +L  G   + ++YN+L+ G
Sbjct: 884  SDRDF-SPTACT---YGPLIDGLSKSGRLYEAKQL---FEGMLDYGCRPNCAIYNILING 943

Query: 205  YISSGVPQAALALYNEMLNLELKPDKLTYNTLISACGKINKLDAAMYFFEEMKERAGKYN 264
            +  +G   AA AL+  M+   ++PD  TY+ L+     + ++D  +++F+E+KE      
Sbjct: 944  FGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE------ 1003

Query: 265  QEDIFPDVVTYTTLLKGFGILKDVRLVHKIVL--EMKSCHDLLIDRTAYTAMIDALVNCG 324
               + PDVV Y  ++ G G  K  RL   +VL  EMK+   +  D   Y ++I  L   G
Sbjct: 1004 -SGLNPDVVCYNLIINGLG--KSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAG 1063

Query: 325  SINGALSLFGELLKLSGWNLDLRPKPHLYLTFMRFFSSRGDYRMVKCLHRRMWLDSSGSI 384
             +  A  ++ E+ +       L P    +   +R +S  G       +++ M    +G  
Sbjct: 1064 MVEEAGKIYNEIQRAG-----LEPNVFTFNALIRGYSLSGKPEHAYAVYQTM---VTGGF 1100

[Close]

BLAST of CmaCh09G005280 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 90.1 bits (222), Expect = 7.6e-18
Identity = 96/437 (21.97%), Postives = 180/437 (41.19%), Query Frame = 0


Query: 36  RRIDSPRSPNLKRLTSRVVRLTRRKQLHQIFEEIEIAKRRYGKLNTIVMNAVLEACVHCG 95
           R +++   P++    S V  + R        + +   + R  K +    + ++++    G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242

Query: 96  DIDLALSTFNEMSKPGNCGLDNVSYGTLLKGLGEARKIDEAFLLLESVEEGTAIGSPTLS 155
            ID A+S F EM   G      V+Y +L++GL +A K ++  LLL+ +     +    + 
Sbjct: 243 CIDAAISLFKEMETKG-IKSSVVTYNSLVRGLCKAGKWNDGALLLKDM-----VSREIVP 302

Query: 156 APLIYGV-LNALTEAGDMRRANGLIARYGFLLHEGGNLSISVYNLLMKGYISSGVPQAAL 215
             + + V L+   + G ++ AN L   Y  ++  G + +I  YN LM GY        A 
Sbjct: 303 NVITFNVLLDVFVKEGKLQEANEL---YKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 362

Query: 216 ALYNEMLNLELKPDKLTYNTLISACGKINKLDAAMYFFEEMKERAGKYNQEDIFPDVVTY 275
            + + M+  +  PD +T+ +LI     + ++D  M  F  + +R        +  + VTY
Sbjct: 363 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG-------LVANAVTY 422

Query: 276 TTLLKGFGILKDVRLVHKIVLEMKSCHDLLIDRTAYTAMIDALVNCGSINGALSLFGELL 335
           + L++GF     ++L  ++  EM S H +L D   Y  ++D L + G +  AL +F +L 
Sbjct: 423 SILVQGFCQSGKIKLAEELFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 482

Query: 336 KL-----------------------SGWNL-------DLRPKPHLYLTFMRFFSSRGDYR 395
           K                          WNL        ++P    Y   +     +G   
Sbjct: 483 KSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLS 542

Query: 396 MVKCLHRRMWLDSSGSISPGFQEEADHLLMEAALHDNQIDVATEKLSTIIKRWKGISWSS 442
               L R+M  D +        +   + L+ A L D  +  + +    +I+  K   +S+
Sbjct: 543 EANILLRKMEEDGNAP-----NDCTYNTLIRAHLRDGDLTASAK----LIEEMKSCGFSA 593

The following BLAST results are available for this feature:

BLAST of CmaCh09G005280 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYD6	8.7e-184	59.67	Pentatricopeptide repeat-containing protein At5g10690 OS=Arabidopsis thaliana OX...	[more]
Q9FIX3	3.3e-18	28.63	Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX...	[more]
Q9SIC9	7.4e-18	29.75	Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop...	[more]
Q9SZ52	1.7e-17	25.83	Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidop...	[more]
P0C7Q7	6.3e-17	22.45	Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS...	[more]

BLAST of CmaCh09G005280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ILI3	0.0e+00	100.00	pentatricopeptide repeat-containing protein At5g10690 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1FEL4	0.0e+00	97.64	pentatricopeptide repeat-containing protein At5g10690 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1IF33	0.0e+00	99.63	pentatricopeptide repeat-containing protein At5g10690 isoform X2 OS=Cucurbita ma...	[more]
A0A6J1F9Q1	2.0e-308	97.80	pentatricopeptide repeat-containing protein At5g10690 isoform X2 OS=Cucurbita mo...	[more]
A0A1S3CQY3	1.3e-302	88.53	pentatricopeptide repeat-containing protein At5g10690 isoform X5 OS=Cucumis melo...	[more]

BLAST of CmaCh09G005280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975759.1	0.0e+00	100.00	pentatricopeptide repeat-containing protein At5g10690 isoform X1 [Cucurbita maxi...	[more]
XP_023535821.1	0.0e+00	97.98	pentatricopeptide repeat-containing protein At5g10690 isoform X1 [Cucurbita pepo...	[more]
XP_022936928.1	0.0e+00	97.64	pentatricopeptide repeat-containing protein At5g10690 isoform X1 [Cucurbita mosc...	[more]
KAG6591628.1	0.0e+00	83.52	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022975761.1	0.0e+00	99.63	pentatricopeptide repeat-containing protein At5g10690 isoform X2 [Cucurbita maxi...	[more]

BLAST of CmaCh09G005280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10690.1	6.2e-185	59.67	pentatricopeptide (PPR) repeat-containing protein / CBS domain-containing protei...	[more]
AT5G39710.1	2.4e-19	28.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G31400.1	5.3e-19	29.75	genomes uncoupled 1	[more]
AT4G31850.1	1.2e-18	25.83	proton gradient regulation 3	[more]
AT1G12700.1	7.6e-18	21.97	ATP binding;nucleic acid binding;helicases	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 194..240 e-value: 3.5E-11 score: 43.1 coord: 80..127 e-value: 2.5E-8 score: 34.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13812	PPR_3	coord: 262..299 e-value: 3.7E-4 score: 20.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 309..339 e-value: 9.2E-4 score: 17.2 coord: 196..228 e-value: 2.0E-5 score: 22.5 coord: 84..109 e-value: 0.0021 score: 16.1 coord: 231..258 e-value: 1.6E-7 score: 29.0
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 309..335 e-value: 0.0014 score: 18.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 228..258 score: 10.873667
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 306..341 score: 8.61564
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 193..227 score: 10.490022
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 80..114 score: 8.670445
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 48..182 e-value: 7.1E-17 score: 63.7 coord: 183..432 e-value: 2.6E-31 score: 111.2
IPR044781	Pentatricopeptide repeat-containing protein At5g10690-like	PANTHER	PTHR47581	OS09G0431600 PROTEIN	coord: 23..581
None	No IPR available	CDD	cd02205	CBS_pair_SF	coord: 477..574 e-value: 7.00294E-5 score: 40.6908
None	No IPR available	SUPERFAMILY	54631	CBS-domain pair	coord: 456..578

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G005280.1	CmaCh09G005280.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0005515	protein binding