CmaCh09G004810 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTCCAATGGCTAAAAAATTTCATTGCTGTGAAATTGTTAGCGTATTATGTGTTGCAGCTGTCTTGAGTTCTTGATCTGAGTGTTCATTGCTCCTTGGAATTATCTATACGAAATGCTTGCAGAACTTGAAGGACTTGATGTTGCATTTCATACCAAGTGCTATGAGTTTTGAACTACCTCATTCTTCCATCGGATCCAATCATTTCTTTGAATCATTTCTGCATCTGTTAGCATTTCATTCAATTGTTTTGCAGGAAGAACAGGACGAGATAGCAATAATTTCTGCATCTGGTGCAATGAAGCCGCACGGATCATCTTTGAACCCGTATGCAACATCCTACATTCCAATCTCCAAGAGAGAGGCTAACAAAGCTTTTATGGCAGAAAGCTCTTCCAGGGAAAATATTGGGGCTAACCTTCCGGGAAATTCTGAACAGAAAATGTGTGGTTTAAATTTGCGCAATGGTAAAAAGGCACCTGATGATGCAGTTGCTCCTGCTGTGAAGAATCACCCTTTTCATGGATCATTGTCAAAAGACAATAGTGAATTCACTGAAATGGAGACTTTTCATACAGAAGTTAATATGGAACTGGAATTGCTTCAAATCTGTTTCCCTGGACTATCTGAACAGTCCCTTGCTGGTGTCTATTTTGCAAATAACGCTGACTTGGATGCTGCTATGGACATGCTGAACCAACTTGAGGTTTTCTCTGTCTGCCTTTTTATCTTAAACTGCTGTTTCACTCGACTGTTGTTACCGTACAAACTTGGTTGACGAACATTGTTTATGCTTGTGATTTGCATTATTAGTATCACGTATGATGATCTTATGCATGTTGTGAATGGTATCTATGTTTAACTAACTCTTTTGTTGGTTTAATTTGATATTTAGGACAAACATCCGTCTGATTTTGAATACGACCCTGAAAGTCTCCCGGACTCTTTGGACATCGGTGATATCTCGGAATCTGGGTTTGCAGCTGCTGATCAACTTTCTTCCAGAATGAAGAATGTAGCCAGTGGCGCAAGTACTTCAACCAGATTCTAGGAGTGCCTGTTGGTTTTGAGAAGTGGTTTTCTGTTTCCTTTCCTGGTTTTCCTTAGATTACTTTAGGATAAGGGATCCTCTCTGGTTATAGGATTGTATAGTGTTCCGAGTTCCTTGTACTTACATGAACTCGTTTGCAACGTTGTCGGTGTCTTCGGTTTGACCGATCAAAAAGATCGAAATAGGGCAAGCTTTGCTTATTGATATTCCCTTCTTCACCTCTTTTGTGTTGTAGGGTAGATATTGTTCTCTTCTGGGCTTCCCTTAAAGTTTAAAAAAAAAGTTTTCATACCTTTGTAAGAAATGTTCAACAACGAGTATCTCACAATCTATCCTCGGAGCCTAGTATCGTCATGGCGTATTGCTTGAACTTGCTTGATATCATTTGTTATTATTTGTAACAGCATAAGCCTACCGCAGATATTCTTATCTTTGGAGAATAAGACATTTTTAAATTTTAAGAATCTATCAAAGGAATTATATCAAATATTTCACTTATGAGAATAACGG ATGCTTCCAATGGCTAAAAAATTTCATTGCTGTGAAATTGTTAGCAACTTGAAGGACTTGATGTTGCATTTCATACCAAGTGCTATGAGTTTTGAACTACCTCATTCTTCCATCGGATCCAATCATTTCTTTGAATCATTTCTGCATCTGTTAGCATTTCATTCAATTGTTTTGCAGGAAGAACAGGACGAGATAGCAATAATTTCTGCATCTGGTGCAATGAAGCCGCACGGATCATCTTTGAACCCGTATGCAACATCCTACATTCCAATCTCCAAGAGAGAGGCTAACAAAGCTTTTATGGCAGAAAGCTCTTCCAGGGAAAATATTGGGGCTAACCTTCCGGGAAATTCTGAACAGAAAATGTGTGGTTTAAATTTGCGCAATGGTAAAAAGGCACCTGATGATGCAGTTGCTCCTGCTGTGAAGAATCACCCTTTTCATGGATCATTGTCAAAAGACAATAGTGAATTCACTGAAATGGAGACTTTTCATACAGAAGTTAATATGGAACTGGAATTGCTTCAAATCTGTTTCCCTGGACTATCTGAACAGTCCCTTGCTGGTGTCTATTTTGCAAATAACGCTGACTTGGATGCTGCTATGGACATGCTGAACCAACTTGAGGACAAACATCCGTCTGATTTTGAATACGACCCTGAAAGTCTCCCGGACTCTTTGGACATCGGTGATATCTCGGAATCTGGGTTTGCAGCTGCTGATCAACTTTCTTCCAGAATGAAGAATGTAGCCAGTGGCGCAAGTACTTCAACCAGATTCTAGGAGTGCCTGTTGGTTTTGAGAAGTGGTTTTCTGTTTCCTTTCCTGGTTTTCCTTAGATTACTTTAGGATAAGGGATCCTCTCTGGTTATAGGATTGTATAGTGTTCCGAGTTCCTTGTACTTACATGAACTCGTTTGCAACGTTGTCGGTGTCTTCGGTTTGACCGATCAAAAAGATCGAAATAGGGCAAGCTTTGCTTATTGATATTCCCTTCTTCACCTCTTTTGTGTTGTAGGGTAGATATTGTTCTCTTCTGGGCTTCCCTTAAAGTTTAAAAAAAAAGTTTTCATACCTTTGTAAGAAATGTTCAACAACGAGTATCTCACAATCTATCCTCGGAGCCTAGTATCGTCATGGCGTATTGCTTGAACTTGCTTGATATCATTTGTTATTATTTGTAACAGCATAAGCCTACCGCAGATATTCTTATCTTTGGAGAATAAGACATTTTTAAATTTTAAGAATCTATCAAAGGAATTATATCAAATATTTCACTTATGAGAATAACGG ATGCTTCCAATGGCTAAAAAATTTCATTGCTGTGAAATTGTTAGCAACTTGAAGGACTTGATGTTGCATTTCATACCAAGTGCTATGAGTTTTGAACTACCTCATTCTTCCATCGGATCCAATCATTTCTTTGAATCATTTCTGCATCTGTTAGCATTTCATTCAATTGTTTTGCAGGAAGAACAGGACGAGATAGCAATAATTTCTGCATCTGGTGCAATGAAGCCGCACGGATCATCTTTGAACCCGTATGCAACATCCTACATTCCAATCTCCAAGAGAGAGGCTAACAAAGCTTTTATGGCAGAAAGCTCTTCCAGGGAAAATATTGGGGCTAACCTTCCGGGAAATTCTGAACAGAAAATGTGTGGTTTAAATTTGCGCAATGGTAAAAAGGCACCTGATGATGCAGTTGCTCCTGCTGTGAAGAATCACCCTTTTCATGGATCATTGTCAAAAGACAATAGTGAATTCACTGAAATGGAGACTTTTCATACAGAAGTTAATATGGAACTGGAATTGCTTCAAATCTGTTTCCCTGGACTATCTGAACAGTCCCTTGCTGGTGTCTATTTTGCAAATAACGCTGACTTGGATGCTGCTATGGACATGCTGAACCAACTTGAGGACAAACATCCGTCTGATTTTGAATACGACCCTGAAAGTCTCCCGGACTCTTTGGACATCGGTGATATCTCGGAATCTGGGTTTGCAGCTGCTGATCAACTTTCTTCCAGAATGAAGAATGTAGCCAGTGGCGCAAGTACTTCAACCAGATTCTAG MLPMAKKFHCCEIVSNLKDLMLHFIPSAMSFELPHSSIGSNHFFESFLHLLAFHSIVLQEEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSEQKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICFPGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQLSSRMKNVASGASTSTRF Homology
BLAST of CmaCh09G004810 vs. ExPASy Swiss-Prot
Match: Q6NQH9 (Polyadenylate-binding protein-interacting protein 6 OS=Arabidopsis thaliana OX=3702 GN=CID6 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 4.1e-14 Identity = 62/191 (32.46%), Postives = 96/191 (50.26%), Query Frame = 0
BLAST of CmaCh09G004810 vs. ExPASy Swiss-Prot
Match: Q9LYE5 (Polyadenylate-binding protein-interacting protein 5 OS=Arabidopsis thaliana OX=3702 GN=CID5 PE=2 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 6.9e-14 Identity = 64/191 (33.51%), Postives = 94/191 (49.21%), Query Frame = 0
BLAST of CmaCh09G004810 vs. ExPASy TrEMBL
Match: A0A6J1IIU2 (polyadenylate-binding protein-interacting protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111476662 PE=4 SV=1) HSP 1 Score: 393.3 bits (1009), Expect = 8.0e-106 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CmaCh09G004810 vs. ExPASy TrEMBL
Match: A0A6J1F6U2 (polyadenylate-binding protein-interacting protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111442652 PE=4 SV=1) HSP 1 Score: 377.9 bits (969), Expect = 3.5e-101 Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0
BLAST of CmaCh09G004810 vs. ExPASy TrEMBL
Match: A0A5A7TBQ8 (Polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007180 PE=4 SV=1) HSP 1 Score: 258.8 bits (660), Expect = 2.4e-65 Identity = 141/215 (65.58%), Postives = 167/215 (77.67%), Query Frame = 0
BLAST of CmaCh09G004810 vs. ExPASy TrEMBL
Match: A0A1S3CR41 (polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo OX=3656 GN=LOC103503796 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 9.3e-62 Identity = 132/196 (67.35%), Postives = 156/196 (79.59%), Query Frame = 0
BLAST of CmaCh09G004810 vs. ExPASy TrEMBL
Match: A0A0A0LHC3 (CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878960 PE=4 SV=1) HSP 1 Score: 245.0 bits (624), Expect = 3.5e-61 Identity = 131/197 (66.50%), Postives = 153/197 (77.66%), Query Frame = 0
BLAST of CmaCh09G004810 vs. NCBI nr
Match: KAG7024479.1 (Polyadenylate-binding protein-interacting protein 5 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 444.1 bits (1141), Expect = 8.2e-121 Identity = 229/242 (94.63%), Postives = 233/242 (96.28%), Query Frame = 0
BLAST of CmaCh09G004810 vs. NCBI nr
Match: XP_022976200.1 (polyadenylate-binding protein-interacting protein 5-like [Cucurbita maxima]) HSP 1 Score: 393.3 bits (1009), Expect = 1.7e-105 Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0
BLAST of CmaCh09G004810 vs. NCBI nr
Match: XP_023536366.1 (polyadenylate-binding protein-interacting protein 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 379.8 bits (974), Expect = 1.9e-101 Identity = 195/201 (97.01%), Postives = 196/201 (97.51%), Query Frame = 0
BLAST of CmaCh09G004810 vs. NCBI nr
Match: XP_022935877.1 (polyadenylate-binding protein-interacting protein 5-like [Cucurbita moschata]) HSP 1 Score: 377.9 bits (969), Expect = 7.2e-101 Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0
BLAST of CmaCh09G004810 vs. NCBI nr
Match: KAG6591590.1 (Polyadenylate-binding protein-interacting protein 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 367.9 bits (943), Expect = 7.5e-98 Identity = 188/195 (96.41%), Postives = 190/195 (97.44%), Query Frame = 0
BLAST of CmaCh09G004810 vs. TAIR 10
Match: AT5G25540.1 (CTC-interacting domain 6 ) HSP 1 Score: 80.1 bits (196), Expect = 2.9e-15 Identity = 62/191 (32.46%), Postives = 96/191 (50.26%), Query Frame = 0
BLAST of CmaCh09G004810 vs. TAIR 10
Match: AT5G11440.1 (CTC-interacting domain 5 ) HSP 1 Score: 79.3 bits (194), Expect = 4.9e-15 Identity = 64/191 (33.51%), Postives = 94/191 (49.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|