CmaCh09G004810 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G004810
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionpolyadenylate-binding protein-interacting protein 5-like
LocationCma_Chr09: 2136688 .. 2138250 (-)
RNA-Seq ExpressionCmaCh09G004810
SyntenyCmaCh09G004810
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTCCAATGGCTAAAAAATTTCATTGCTGTGAAATTGTTAGCGTATTATGTGTTGCAGCTGTCTTGAGTTCTTGATCTGAGTGTTCATTGCTCCTTGGAATTATCTATACGAAATGCTTGCAGAACTTGAAGGACTTGATGTTGCATTTCATACCAAGTGCTATGAGTTTTGAACTACCTCATTCTTCCATCGGATCCAATCATTTCTTTGAATCATTTCTGCATCTGTTAGCATTTCATTCAATTGTTTTGCAGGAAGAACAGGACGAGATAGCAATAATTTCTGCATCTGGTGCAATGAAGCCGCACGGATCATCTTTGAACCCGTATGCAACATCCTACATTCCAATCTCCAAGAGAGAGGCTAACAAAGCTTTTATGGCAGAAAGCTCTTCCAGGGAAAATATTGGGGCTAACCTTCCGGGAAATTCTGAACAGAAAATGTGTGGTTTAAATTTGCGCAATGGTAAAAAGGCACCTGATGATGCAGTTGCTCCTGCTGTGAAGAATCACCCTTTTCATGGATCATTGTCAAAAGACAATAGTGAATTCACTGAAATGGAGACTTTTCATACAGAAGTTAATATGGAACTGGAATTGCTTCAAATCTGTTTCCCTGGACTATCTGAACAGTCCCTTGCTGGTGTCTATTTTGCAAATAACGCTGACTTGGATGCTGCTATGGACATGCTGAACCAACTTGAGGTTTTCTCTGTCTGCCTTTTTATCTTAAACTGCTGTTTCACTCGACTGTTGTTACCGTACAAACTTGGTTGACGAACATTGTTTATGCTTGTGATTTGCATTATTAGTATCACGTATGATGATCTTATGCATGTTGTGAATGGTATCTATGTTTAACTAACTCTTTTGTTGGTTTAATTTGATATTTAGGACAAACATCCGTCTGATTTTGAATACGACCCTGAAAGTCTCCCGGACTCTTTGGACATCGGTGATATCTCGGAATCTGGGTTTGCAGCTGCTGATCAACTTTCTTCCAGAATGAAGAATGTAGCCAGTGGCGCAAGTACTTCAACCAGATTCTAGGAGTGCCTGTTGGTTTTGAGAAGTGGTTTTCTGTTTCCTTTCCTGGTTTTCCTTAGATTACTTTAGGATAAGGGATCCTCTCTGGTTATAGGATTGTATAGTGTTCCGAGTTCCTTGTACTTACATGAACTCGTTTGCAACGTTGTCGGTGTCTTCGGTTTGACCGATCAAAAAGATCGAAATAGGGCAAGCTTTGCTTATTGATATTCCCTTCTTCACCTCTTTTGTGTTGTAGGGTAGATATTGTTCTCTTCTGGGCTTCCCTTAAAGTTTAAAAAAAAAGTTTTCATACCTTTGTAAGAAATGTTCAACAACGAGTATCTCACAATCTATCCTCGGAGCCTAGTATCGTCATGGCGTATTGCTTGAACTTGCTTGATATCATTTGTTATTATTTGTAACAGCATAAGCCTACCGCAGATATTCTTATCTTTGGAGAATAAGACATTTTTAAATTTTAAGAATCTATCAAAGGAATTATATCAAATATTTCACTTATGAGAATAACGG

mRNA sequence

ATGCTTCCAATGGCTAAAAAATTTCATTGCTGTGAAATTGTTAGCAACTTGAAGGACTTGATGTTGCATTTCATACCAAGTGCTATGAGTTTTGAACTACCTCATTCTTCCATCGGATCCAATCATTTCTTTGAATCATTTCTGCATCTGTTAGCATTTCATTCAATTGTTTTGCAGGAAGAACAGGACGAGATAGCAATAATTTCTGCATCTGGTGCAATGAAGCCGCACGGATCATCTTTGAACCCGTATGCAACATCCTACATTCCAATCTCCAAGAGAGAGGCTAACAAAGCTTTTATGGCAGAAAGCTCTTCCAGGGAAAATATTGGGGCTAACCTTCCGGGAAATTCTGAACAGAAAATGTGTGGTTTAAATTTGCGCAATGGTAAAAAGGCACCTGATGATGCAGTTGCTCCTGCTGTGAAGAATCACCCTTTTCATGGATCATTGTCAAAAGACAATAGTGAATTCACTGAAATGGAGACTTTTCATACAGAAGTTAATATGGAACTGGAATTGCTTCAAATCTGTTTCCCTGGACTATCTGAACAGTCCCTTGCTGGTGTCTATTTTGCAAATAACGCTGACTTGGATGCTGCTATGGACATGCTGAACCAACTTGAGGACAAACATCCGTCTGATTTTGAATACGACCCTGAAAGTCTCCCGGACTCTTTGGACATCGGTGATATCTCGGAATCTGGGTTTGCAGCTGCTGATCAACTTTCTTCCAGAATGAAGAATGTAGCCAGTGGCGCAAGTACTTCAACCAGATTCTAGGAGTGCCTGTTGGTTTTGAGAAGTGGTTTTCTGTTTCCTTTCCTGGTTTTCCTTAGATTACTTTAGGATAAGGGATCCTCTCTGGTTATAGGATTGTATAGTGTTCCGAGTTCCTTGTACTTACATGAACTCGTTTGCAACGTTGTCGGTGTCTTCGGTTTGACCGATCAAAAAGATCGAAATAGGGCAAGCTTTGCTTATTGATATTCCCTTCTTCACCTCTTTTGTGTTGTAGGGTAGATATTGTTCTCTTCTGGGCTTCCCTTAAAGTTTAAAAAAAAAGTTTTCATACCTTTGTAAGAAATGTTCAACAACGAGTATCTCACAATCTATCCTCGGAGCCTAGTATCGTCATGGCGTATTGCTTGAACTTGCTTGATATCATTTGTTATTATTTGTAACAGCATAAGCCTACCGCAGATATTCTTATCTTTGGAGAATAAGACATTTTTAAATTTTAAGAATCTATCAAAGGAATTATATCAAATATTTCACTTATGAGAATAACGG

Coding sequence (CDS)

ATGCTTCCAATGGCTAAAAAATTTCATTGCTGTGAAATTGTTAGCAACTTGAAGGACTTGATGTTGCATTTCATACCAAGTGCTATGAGTTTTGAACTACCTCATTCTTCCATCGGATCCAATCATTTCTTTGAATCATTTCTGCATCTGTTAGCATTTCATTCAATTGTTTTGCAGGAAGAACAGGACGAGATAGCAATAATTTCTGCATCTGGTGCAATGAAGCCGCACGGATCATCTTTGAACCCGTATGCAACATCCTACATTCCAATCTCCAAGAGAGAGGCTAACAAAGCTTTTATGGCAGAAAGCTCTTCCAGGGAAAATATTGGGGCTAACCTTCCGGGAAATTCTGAACAGAAAATGTGTGGTTTAAATTTGCGCAATGGTAAAAAGGCACCTGATGATGCAGTTGCTCCTGCTGTGAAGAATCACCCTTTTCATGGATCATTGTCAAAAGACAATAGTGAATTCACTGAAATGGAGACTTTTCATACAGAAGTTAATATGGAACTGGAATTGCTTCAAATCTGTTTCCCTGGACTATCTGAACAGTCCCTTGCTGGTGTCTATTTTGCAAATAACGCTGACTTGGATGCTGCTATGGACATGCTGAACCAACTTGAGGACAAACATCCGTCTGATTTTGAATACGACCCTGAAAGTCTCCCGGACTCTTTGGACATCGGTGATATCTCGGAATCTGGGTTTGCAGCTGCTGATCAACTTTCTTCCAGAATGAAGAATGTAGCCAGTGGCGCAAGTACTTCAACCAGATTCTAG

Protein sequence

MLPMAKKFHCCEIVSNLKDLMLHFIPSAMSFELPHSSIGSNHFFESFLHLLAFHSIVLQEEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSEQKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICFPGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQLSSRMKNVASGASTSTRF
Homology
BLAST of CmaCh09G004810 vs. ExPASy Swiss-Prot
Match: Q6NQH9 (Polyadenylate-binding protein-interacting protein 6 OS=Arabidopsis thaliana OX=3702 GN=CID6 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.1e-14
Identity = 62/191 (32.46%), Postives = 96/191 (50.26%), Query Frame = 0

Query: 74  MKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSEQKMCGLNL------ 133
           MK   S+LNPYA +Y+P+SKRE +   + ++            + +Q   G  +      
Sbjct: 1   MKSGSSTLNPYAAAYVPLSKREGS---LVDTKPVTQQHMQQQHHQQQPYYGYGVQGMGSY 60

Query: 134 RNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICFPGLSEQSL 193
           +  + +P  + +  V NH              +++    E++M++E L   +PGLS++S+
Sbjct: 61  QGTQMSPKKSPSEMVYNH--------------QLKDEDLEMDMDIEYLLATYPGLSQESI 120

Query: 194 AGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQLSSRM 253
             VY AN  DLDA ++MLNQLE       EY    LPD+LDIGD+ E         SS+ 
Sbjct: 121 NDVYLANTCDLDATIEMLNQLEIYSTEAEEY----LPDTLDIGDVPE-----IITESSKQ 165

Query: 254 KNVASGASTST 259
           KN  S AS+S+
Sbjct: 181 KNDGSSASSSS 165

BLAST of CmaCh09G004810 vs. ExPASy Swiss-Prot
Match: Q9LYE5 (Polyadenylate-binding protein-interacting protein 5 OS=Arabidopsis thaliana OX=3702 GN=CID5 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.9e-14
Identity = 64/191 (33.51%), Postives = 94/191 (49.21%), Query Frame = 0

Query: 74  MKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSEQKMCGLNLRNGKKA 133
           MKP   +LNP+A SY+PISKR                              ++   G   
Sbjct: 1   MKPGAFALNPHAASYVPISKR------------------------------VDYGGG--- 60

Query: 134 PDDAVAPAVKNHPFHGSLSKDNSEFTEME------TFHTEVNMELELLQICFPGLSEQSL 193
            DD +  A K+     S+ K +SE    +          +++M++E L + F GLS++S+
Sbjct: 61  -DDGLVFAAKSPTVEVSMPKKSSEMAYKQIRDDDLDLEMDIDMDIEYLLVTFSGLSQESI 120

Query: 194 AGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQLSSRM 253
             VY AN  DL+A ++MLNQLE  + ++ E   E+LP++LDIGDISESG        S  
Sbjct: 121 TDVYLANGGDLEATIEMLNQLE-IYSTESE---ENLPETLDIGDISESG-------PSTS 146

Query: 254 KNVASGASTST 259
           K+    ASTS+
Sbjct: 181 KSTEVAASTSS 146

BLAST of CmaCh09G004810 vs. ExPASy TrEMBL
Match: A0A6J1IIU2 (polyadenylate-binding protein-interacting protein 5-like OS=Cucurbita maxima OX=3661 GN=LOC111476662 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 8.0e-106
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0

Query: 60  EEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSE 119
           EEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSE
Sbjct: 2   EEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSE 61

Query: 120 QKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICF 179
           QKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICF
Sbjct: 62  QKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICF 121

Query: 180 PGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA 239
           PGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA
Sbjct: 122 PGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA 181

Query: 240 ADQLSSRMKNVASGASTSTRF 261
           ADQLSSRMKNVASGASTSTRF
Sbjct: 182 ADQLSSRMKNVASGASTSTRF 202

BLAST of CmaCh09G004810 vs. ExPASy TrEMBL
Match: A0A6J1F6U2 (polyadenylate-binding protein-interacting protein 5-like OS=Cucurbita moschata OX=3662 GN=LOC111442652 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.5e-101
Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0

Query: 60  EEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSE 119
           E QDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAF+AESSSRENIGANLPGNSE
Sbjct: 2   EGQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFIAESSSRENIGANLPGNSE 61

Query: 120 QKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICF 179
           QKMCGLNLRNGKKAPDDAVA AVKNHPFHGSLSKDNSEF EMETFHTEVNMELELLQICF
Sbjct: 62  QKMCGLNLRNGKKAPDDAVASAVKNHPFHGSLSKDNSEFAEMETFHTEVNMELELLQICF 121

Query: 180 PGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA 239
           PGLSEQSL  VYFANNADLDAAMDMLNQLE+KHPSDFEYDPESLPDSLDIGDISESGFAA
Sbjct: 122 PGLSEQSLTDVYFANNADLDAAMDMLNQLENKHPSDFEYDPESLPDSLDIGDISESGFAA 181

Query: 240 ADQLSSRMKNVASGASTSTRF 261
           ADQLSSRMKNVASGASTSTRF
Sbjct: 182 ADQLSSRMKNVASGASTSTRF 202

BLAST of CmaCh09G004810 vs. ExPASy TrEMBL
Match: A0A5A7TBQ8 (Polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007180 PE=4 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 2.4e-65
Identity = 141/215 (65.58%), Postives = 167/215 (77.67%), Query Frame = 0

Query: 55  SIVLQEEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANL 114
           S V  E  D+I I+S SG MKPHGSSLNP+ATSYIP+S+R AN+ F+AE++SRENIGAN+
Sbjct: 13  SDVALEGLDKIEIVSPSGEMKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANV 72

Query: 115 PGNSEQKMC---------GLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFH 174
           PG SEQ +           LN+ +GKKA   A + AVKNHPFHGSLS+ +S+ +EME F 
Sbjct: 73  PGYSEQCLYPPYNNSISPRLNMNHGKKA-SVAASSAVKNHPFHGSLSQQSSDLSEMEIFD 132

Query: 175 TEVNMELELLQICFPGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPD 234
            EVNM+LELLQ+ FPGLSEQSL  VYFAN  DLDAA+DML+QLE+KHP D EYD ESLPD
Sbjct: 133 REVNMDLELLQVSFPGLSEQSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDSESLPD 192

Query: 235 SLDIGDISESGFAAADQLSSRMKNVASGASTSTRF 261
           +LDIGDISESGF   DQ S RMKNVA+ ASTS+RF
Sbjct: 193 TLDIGDISESGFVTVDQPSFRMKNVANQASTSSRF 226

BLAST of CmaCh09G004810 vs. ExPASy TrEMBL
Match: A0A1S3CR41 (polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo OX=3656 GN=LOC103503796 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 9.3e-62
Identity = 132/196 (67.35%), Postives = 156/196 (79.59%), Query Frame = 0

Query: 74  MKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSEQKMC---------G 133
           MKPHGSSLNP+ATSYIP+S+R AN+ F+AE++SRENIGAN+PG SEQ +           
Sbjct: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIAENTSRENIGANVPGYSEQCLYPPYNNSISPR 60

Query: 134 LNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICFPGLSE 193
           LN+ +GKKA   A + AVKNHPFHGSLS+ +S+ +EME F  EVNM+LELLQ+ FPGLSE
Sbjct: 61  LNMNHGKKA-SVAASSAVKNHPFHGSLSQQSSDLSEMEIFDREVNMDLELLQVSFPGLSE 120

Query: 194 QSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQLS 253
           QSL  VYFAN  DLDAA+DML+QLE+KHP D EYD ESLPD+LDIGDISESGF   DQ S
Sbjct: 121 QSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDSESLPDTLDIGDISESGFVTVDQPS 180

Query: 254 SRMKNVASGASTSTRF 261
            RMKNVA+ ASTS+RF
Sbjct: 181 FRMKNVANQASTSSRF 195

BLAST of CmaCh09G004810 vs. ExPASy TrEMBL
Match: A0A0A0LHC3 (CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878960 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 3.5e-61
Identity = 131/197 (66.50%), Postives = 153/197 (77.66%), Query Frame = 0

Query: 74  MKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSEQKMCG--------- 133
           MKPHGSSLNP+ATSYIP+S+R AN+ F+ E++SRENIGANLPG SEQ +           
Sbjct: 1   MKPHGSSLNPFATSYIPLSQRGANRTFIGENTSRENIGANLPGYSEQCVYNPPYNNSISP 60

Query: 134 -LNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICFPGLS 193
            LN+ +GKKA       AVKNHPF GSLS+ +S+ TEME F  EVNM++ELLQ+ FPGLS
Sbjct: 61  RLNMNHGKKA--SVAGAAVKNHPFLGSLSQQSSDLTEMEMFDREVNMDIELLQVSFPGLS 120

Query: 194 EQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQL 253
           EQSL  VYFAN  DLDAA+DML+QLE+KHP D EYDPESLPD+LDIGDISESGF   DQ 
Sbjct: 121 EQSLTDVYFANKGDLDAAIDMLSQLENKHPHDVEYDPESLPDTLDIGDISESGFVTVDQP 180

Query: 254 SSRMKNVASGASTSTRF 261
           S RMKNVA+ ASTS+RF
Sbjct: 181 SFRMKNVANQASTSSRF 195

BLAST of CmaCh09G004810 vs. NCBI nr
Match: KAG7024479.1 (Polyadenylate-binding protein-interacting protein 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 444.1 bits (1141), Expect = 8.2e-121
Identity = 229/242 (94.63%), Postives = 233/242 (96.28%), Query Frame = 0

Query: 19  DLMLHFIPSAMSFELPHSSIGSNHFFESFLHLLAFHSIVLQEEQDEIAIISASGAMKPHG 78
           DLMLHF+PSAMSFEL HSSI  NHFFESF HLLAFH+IVLQE QDEIAIISASGAMKPHG
Sbjct: 10  DLMLHFMPSAMSFELLHSSIAFNHFFESFPHLLAFHTIVLQEGQDEIAIISASGAMKPHG 69

Query: 79  SSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSEQKMCGLNLRNGKKAPDDAV 138
           SSLNPYATSYIPISKREANKAF+AESSSRENIGANLPGNSEQKMCGLNLRNGKKAPDDAV
Sbjct: 70  SSLNPYATSYIPISKREANKAFIAESSSRENIGANLPGNSEQKMCGLNLRNGKKAPDDAV 129

Query: 139 APAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICFPGLSEQSLAGVYFANNADL 198
           A AVKNHPFHGSLSKDNSEF EMETFHTEVNMELELLQICFPGLSEQSL  VYFANNADL
Sbjct: 130 ASAVKNHPFHGSLSKDNSEFAEMETFHTEVNMELELLQICFPGLSEQSLTDVYFANNADL 189

Query: 199 DAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQLSSRMKNVASGASTST 258
           DAAMDMLNQLE+KHPSDFEYDPESLPDSLDIGDISESGFAAADQLSSRMKNVASGASTST
Sbjct: 190 DAAMDMLNQLENKHPSDFEYDPESLPDSLDIGDISESGFAAADQLSSRMKNVASGASTST 249

Query: 259 RF 261
           RF
Sbjct: 250 RF 251

BLAST of CmaCh09G004810 vs. NCBI nr
Match: XP_022976200.1 (polyadenylate-binding protein-interacting protein 5-like [Cucurbita maxima])

HSP 1 Score: 393.3 bits (1009), Expect = 1.7e-105
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0

Query: 60  EEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSE 119
           EEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSE
Sbjct: 2   EEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSE 61

Query: 120 QKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICF 179
           QKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICF
Sbjct: 62  QKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICF 121

Query: 180 PGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA 239
           PGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA
Sbjct: 122 PGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA 181

Query: 240 ADQLSSRMKNVASGASTSTRF 261
           ADQLSSRMKNVASGASTSTRF
Sbjct: 182 ADQLSSRMKNVASGASTSTRF 202

BLAST of CmaCh09G004810 vs. NCBI nr
Match: XP_023536366.1 (polyadenylate-binding protein-interacting protein 5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.8 bits (974), Expect = 1.9e-101
Identity = 195/201 (97.01%), Postives = 196/201 (97.51%), Query Frame = 0

Query: 60  EEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSE 119
           E QDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAF+AESSSRENIGANLPGNSE
Sbjct: 2   EGQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFIAESSSRENIGANLPGNSE 61

Query: 120 QKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICF 179
           QKMCGLNLRNGKKAPDDAVA AVKNHPFHGSLSKDNSEF EMETFHTEVNMELELLQICF
Sbjct: 62  QKMCGLNLRNGKKAPDDAVASAVKNHPFHGSLSKDNSEFAEMETFHTEVNMELELLQICF 121

Query: 180 PGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA 239
           PGLSEQSL  VYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA
Sbjct: 122 PGLSEQSLTDVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA 181

Query: 240 ADQLSSRMKNVASGASTSTRF 261
           ADQLSSRMKNVASGASTSTRF
Sbjct: 182 ADQLSSRMKNVASGASTSTRF 202

BLAST of CmaCh09G004810 vs. NCBI nr
Match: XP_022935877.1 (polyadenylate-binding protein-interacting protein 5-like [Cucurbita moschata])

HSP 1 Score: 377.9 bits (969), Expect = 7.2e-101
Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0

Query: 60  EEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSE 119
           E QDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAF+AESSSRENIGANLPGNSE
Sbjct: 2   EGQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFIAESSSRENIGANLPGNSE 61

Query: 120 QKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICF 179
           QKMCGLNLRNGKKAPDDAVA AVKNHPFHGSLSKDNSEF EMETFHTEVNMELELLQICF
Sbjct: 62  QKMCGLNLRNGKKAPDDAVASAVKNHPFHGSLSKDNSEFAEMETFHTEVNMELELLQICF 121

Query: 180 PGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA 239
           PGLSEQSL  VYFANNADLDAAMDMLNQLE+KHPSDFEYDPESLPDSLDIGDISESGFAA
Sbjct: 122 PGLSEQSLTDVYFANNADLDAAMDMLNQLENKHPSDFEYDPESLPDSLDIGDISESGFAA 181

Query: 240 ADQLSSRMKNVASGASTSTRF 261
           ADQLSSRMKNVASGASTSTRF
Sbjct: 182 ADQLSSRMKNVASGASTSTRF 202

BLAST of CmaCh09G004810 vs. NCBI nr
Match: KAG6591590.1 (Polyadenylate-binding protein-interacting protein 5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 367.9 bits (943), Expect = 7.5e-98
Identity = 188/195 (96.41%), Postives = 190/195 (97.44%), Query Frame = 0

Query: 60  EEQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSE 119
           E QDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAF+AESSSRENIGANLPGNSE
Sbjct: 2   EGQDEIAIISASGAMKPHGSSLNPYATSYIPISKREANKAFIAESSSRENIGANLPGNSE 61

Query: 120 QKMCGLNLRNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICF 179
           QKMCGLNLRNGKKAPDDAVA AVKNHPFHGSLSKDNSEF EMETFHTEVNMELELLQICF
Sbjct: 62  QKMCGLNLRNGKKAPDDAVASAVKNHPFHGSLSKDNSEFAEMETFHTEVNMELELLQICF 121

Query: 180 PGLSEQSLAGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAA 239
           PGLSEQSL  VYFANNADLDAAMDMLNQLE+KHPSDFEYDPESLPDSLDIGDISESGFAA
Sbjct: 122 PGLSEQSLTDVYFANNADLDAAMDMLNQLENKHPSDFEYDPESLPDSLDIGDISESGFAA 181

Query: 240 ADQLSSRMKNVASGA 255
           ADQLSSRMKNVASGA
Sbjct: 182 ADQLSSRMKNVASGA 196

BLAST of CmaCh09G004810 vs. TAIR 10
Match: AT5G25540.1 (CTC-interacting domain 6 )

HSP 1 Score: 80.1 bits (196), Expect = 2.9e-15
Identity = 62/191 (32.46%), Postives = 96/191 (50.26%), Query Frame = 0

Query: 74  MKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSEQKMCGLNL------ 133
           MK   S+LNPYA +Y+P+SKRE +   + ++            + +Q   G  +      
Sbjct: 1   MKSGSSTLNPYAAAYVPLSKREGS---LVDTKPVTQQHMQQQHHQQQPYYGYGVQGMGSY 60

Query: 134 RNGKKAPDDAVAPAVKNHPFHGSLSKDNSEFTEMETFHTEVNMELELLQICFPGLSEQSL 193
           +  + +P  + +  V NH              +++    E++M++E L   +PGLS++S+
Sbjct: 61  QGTQMSPKKSPSEMVYNH--------------QLKDEDLEMDMDIEYLLATYPGLSQESI 120

Query: 194 AGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQLSSRM 253
             VY AN  DLDA ++MLNQLE       EY    LPD+LDIGD+ E         SS+ 
Sbjct: 121 NDVYLANTCDLDATIEMLNQLEIYSTEAEEY----LPDTLDIGDVPE-----IITESSKQ 165

Query: 254 KNVASGASTST 259
           KN  S AS+S+
Sbjct: 181 KNDGSSASSSS 165

BLAST of CmaCh09G004810 vs. TAIR 10
Match: AT5G11440.1 (CTC-interacting domain 5 )

HSP 1 Score: 79.3 bits (194), Expect = 4.9e-15
Identity = 64/191 (33.51%), Postives = 94/191 (49.21%), Query Frame = 0

Query: 74  MKPHGSSLNPYATSYIPISKREANKAFMAESSSRENIGANLPGNSEQKMCGLNLRNGKKA 133
           MKP   +LNP+A SY+PISKR                              ++   G   
Sbjct: 1   MKPGAFALNPHAASYVPISKR------------------------------VDYGGG--- 60

Query: 134 PDDAVAPAVKNHPFHGSLSKDNSEFTEME------TFHTEVNMELELLQICFPGLSEQSL 193
            DD +  A K+     S+ K +SE    +          +++M++E L + F GLS++S+
Sbjct: 61  -DDGLVFAAKSPTVEVSMPKKSSEMAYKQIRDDDLDLEMDIDMDIEYLLVTFSGLSQESI 120

Query: 194 AGVYFANNADLDAAMDMLNQLEDKHPSDFEYDPESLPDSLDIGDISESGFAAADQLSSRM 253
             VY AN  DL+A ++MLNQLE  + ++ E   E+LP++LDIGDISESG        S  
Sbjct: 121 TDVYLANGGDLEATIEMLNQLE-IYSTESE---ENLPETLDIGDISESG-------PSTS 146

Query: 254 KNVASGASTST 259
           K+    ASTS+
Sbjct: 181 KSTEVAASTSS 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q6NQH94.1e-1432.46Polyadenylate-binding protein-interacting protein 6 OS=Arabidopsis thaliana OX=3... [more]
Q9LYE56.9e-1433.51Polyadenylate-binding protein-interacting protein 5 OS=Arabidopsis thaliana OX=3... [more]
Match NameE-valueIdentityDescription
A0A6J1IIU28.0e-106100.00polyadenylate-binding protein-interacting protein 5-like OS=Cucurbita maxima OX=... [more]
A0A6J1F6U23.5e-10196.52polyadenylate-binding protein-interacting protein 5-like OS=Cucurbita moschata O... [more]
A0A5A7TBQ82.4e-6565.58Polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo var. makuwa ... [more]
A0A1S3CR419.3e-6267.35polyadenylate-binding protein-interacting protein 5 OS=Cucumis melo OX=3656 GN=L... [more]
A0A0A0LHC33.5e-6166.50CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G878960 PE=4 SV... [more]
Match NameE-valueIdentityDescription
KAG7024479.18.2e-12194.63Polyadenylate-binding protein-interacting protein 5 [Cucurbita argyrosperma subs... [more]
XP_022976200.11.7e-105100.00polyadenylate-binding protein-interacting protein 5-like [Cucurbita maxima][more]
XP_023536366.11.9e-10197.01polyadenylate-binding protein-interacting protein 5-like [Cucurbita pepo subsp. ... [more]
XP_022935877.17.2e-10196.52polyadenylate-binding protein-interacting protein 5-like [Cucurbita moschata][more]
KAG6591590.17.5e-9896.41Polyadenylate-binding protein-interacting protein 5, partial [Cucurbita argyrosp... [more]
Match NameE-valueIdentityDescription
AT5G25540.12.9e-1532.46CTC-interacting domain 6 [more]
AT5G11440.14.9e-1533.51CTC-interacting domain 5 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038981Polyadenylate-binding protein-interacting protein 5/6PANTHERPTHR37252POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6coord: 74..258
NoneNo IPR availablePANTHERPTHR37252:SF3POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 6coord: 74..258
IPR003892Ubiquitin system component CUEPROSITEPS51140CUEcoord: 167..210
score: 11.366501
IPR041806Polyadenylate-binding protein-interacting protein 5/6/7, CUE domainCDDcd14371CUE_CID7_likecoord: 169..209
e-value: 1.91805E-12
score: 58.4253

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G004810.1CmaCh09G004810.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0043130 ubiquitin binding