CmaCh09G003690 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAACCCATTTCCTCTTCTTTCTTCTTCTTCTCGTCTCTGTGTTCTTTTTTTCTCTCTTTTTTCTTTTTTCTCCTTGTTGTCACTGTTCAAATCTCAAGTCGTCATGTCGATTACTTTGGATAGGGTTCGGCGGGTTGATCAACACTCTGGATTCTCGCCGGAGGATTTGGGTTATGGATCTATGTTTGAGAGGTTGGAGACTGGGGATGTGGATCGCGGTGTTGAAGGGTTTGAAAAGGAGGCTGAGGAATCTAATACTTGCAGCTCAGCTTCAACTTCTTCGTCTTCTTCCATCGGGAGGAATAGTGATAAGTCCGCGAGATCGTCGGATGATGAGGATAGCGGCGAGAATGATGAGGTTCAGAGCTCCTATAAAGGGCCGCTGGATATGATGGACTCCTTGGAGGAGGTTTTGCCTGTCAGGTTCGTGTTCTTTCTGTTTGATGATCTTGTTTTTCATTTGTTTTGGATGCTGTGAACTCGTACTTTCTTCCGCGAATCTTAGTTTGGTCATTGCAAATTGCAAATCGAAATCGTTCATTGTCTCGAGTTAAATTTGATGGATGATCTGGAACGAGCGTGTTGAATATACGGTTGGTGAGGTTGAAATGTTAGGGAAGGCTTAATTGAGCTTGAATATTTAATACTCTTGTAGTACAATGAACTAGGGAGTGGAGATAGTTAACCTGCCCTGCAGAATGTTGGAGTCATTCGATCTATGCTTCATCAATTGCTTTTGCTTCATTTTGGACTTATTACTGGGGATTACGTTACATGCTGGCGGTGACTAGTAGTTATTGCTGATGAACAGATAAAATATTTACATTCGACTCTTGGTAGATTCATTATTGTGGGCATGAATAAATCATGGCCTGTACAAATCTGTTTGTTTCTTTAATAAAGATTAATGCAATGATAAATTCGAGATAACTATATGTTATCGGAGGCTTAATAATGAGAAAAGAGAGCATTCCGAAGCTGAAGATTAGCAAATGACCCCGTTTTTTAATACACTTCAATCATGAGTTTCCGGTCGAATTCTTTATTCATCTTTCTTGCCAATCTCTGTAGCGGAGATTGTGTTTCTGAGATATTCTTAAGCTAAATCAGAAAGAAATCATTGCTTTGCAGTGCTTTATAAAAATTGTTCTGCGACACTGCAAAACGTTAACTACTTATAATTTTAGCATATAACTTTAGAAACACTGTGCTGTTGAGATTGGGAAAAAGGATCGAGTACCTGTTATACATTCAGGTTTTTATGCGATTCTGCACTAGATTGTTCCTTTATCTAATAAGAATTATTGGTACATGCAGAAAAGGTATCTCAAAGTTCTACAATGGAAAATCGAAGTCTTTCACGAGTTTGGCCGATGCGTCCACTGTTTCCTCAGTGGAGGAGATTGTGAAGCCAGAAAATGCCTATTCCAAGAAACGTCGGAATCTTATGGCTTTCAATCTGGTGTGGGAGAAGAACCGGAGTTTACCCCTCAAGAATAACGGTGGAGGGATATCAAAGAGACCCATCAGCTCAAGCAGGAGCTCCTTCGCTTTGGCCGTTGCTATGAGCAGCTCCGAAAGTAACAGCAGTGAGGAATCAAATTGTAGCTCATATTCAAGCTCTCCACCGCCTCGCCCACCTCTGCATCCACAATCCAAAGCGTCTAGCAATCTGGCTTCCATTGTGCCACCACAACGAAATTTCTCCACTTGGCGTTCATATTCCTTGGCTGATCTACAAGAGTGTGCCACCTCTGCTAATAAAGCCAACCTAACAAATCTAAACTGA AAACCCATTTCCTCTTCTTTCTTCTTCTTCTCGTCTCTGTGTTCTTTTTTTCTCTCTTTTTTCTTTTTTCTCCTTGTTGTCACTGTTCAAATCTCAAGTCGTCATGTCGATTACTTTGGATAGGGTTCGGCGGGTTGATCAACACTCTGGATTCTCGCCGGAGGATTTGGGTTATGGATCTATGTTTGAGAGGTTGGAGACTGGGGATGTGGATCGCGGTGTTGAAGGGTTTGAAAAGGAGGCTGAGGAATCTAATACTTGCAGCTCAGCTTCAACTTCTTCGTCTTCTTCCATCGGGAGGAATAGTGATAAGTCCGCGAGATCGTCGGATGATGAGGATAGCGGCGAGAATGATGAGGTTCAGAGCTCCTATAAAGGGCCGCTGGATATGATGGACTCCTTGGAGGAGGTTTTGCCTGTCAGAAAAGGTATCTCAAAGTTCTACAATGGAAAATCGAAGTCTTTCACGAGTTTGGCCGATGCGTCCACTGTTTCCTCAGTGGAGGAGATTGTGAAGCCAGAAAATGCCTATTCCAAGAAACGTCGGAATCTTATGGCTTTCAATCTGGTGTGGGAGAAGAACCGGAGTTTACCCCTCAAGAATAACGGTGGAGGGATATCAAAGAGACCCATCAGCTCAAGCAGGAGCTCCTTCGCTTTGGCCGTTGCTATGAGCAGCTCCGAAAGTAACAGCAGTGAGGAATCAAATTGTAGCTCATATTCAAGCTCTCCACCGCCTCGCCCACCTCTGCATCCACAATCCAAAGCGTCTAGCAATCTGGCTTCCATTGTGCCACCACAACGAAATTTCTCCACTTGGCGTTCATATTCCTTGGCTGATCTACAAGAGTGTGCCACCTCTGCTAATAAAGCCAACCTAACAAATCTAAACTGA ATGTCGATTACTTTGGATAGGGTTCGGCGGGTTGATCAACACTCTGGATTCTCGCCGGAGGATTTGGGTTATGGATCTATGTTTGAGAGGTTGGAGACTGGGGATGTGGATCGCGGTGTTGAAGGGTTTGAAAAGGAGGCTGAGGAATCTAATACTTGCAGCTCAGCTTCAACTTCTTCGTCTTCTTCCATCGGGAGGAATAGTGATAAGTCCGCGAGATCGTCGGATGATGAGGATAGCGGCGAGAATGATGAGGTTCAGAGCTCCTATAAAGGGCCGCTGGATATGATGGACTCCTTGGAGGAGGTTTTGCCTGTCAGAAAAGGTATCTCAAAGTTCTACAATGGAAAATCGAAGTCTTTCACGAGTTTGGCCGATGCGTCCACTGTTTCCTCAGTGGAGGAGATTGTGAAGCCAGAAAATGCCTATTCCAAGAAACGTCGGAATCTTATGGCTTTCAATCTGGTGTGGGAGAAGAACCGGAGTTTACCCCTCAAGAATAACGGTGGAGGGATATCAAAGAGACCCATCAGCTCAAGCAGGAGCTCCTTCGCTTTGGCCGTTGCTATGAGCAGCTCCGAAAGTAACAGCAGTGAGGAATCAAATTGTAGCTCATATTCAAGCTCTCCACCGCCTCGCCCACCTCTGCATCCACAATCCAAAGCGTCTAGCAATCTGGCTTCCATTGTGCCACCACAACGAAATTTCTCCACTTGGCGTTCATATTCCTTGGCTGATCTACAAGAGTGTGCCACCTCTGCTAATAAAGCCAACCTAACAAATCTAAACTGA MSITLDRVRRVDQHSGFSPEDLGYGSMFERLETGDVDRGVEGFEKEAEESNTCSSASTSSSSSIGRNSDKSARSSDDEDSGENDEVQSSYKGPLDMMDSLEEVLPVRKGISKFYNGKSKSFTSLADASTVSSVEEIVKPENAYSKKRRNLMAFNLVWEKNRSLPLKNNGGGISKRPISSSRSSFALAVAMSSSESNSSEESNCSSYSSSPPPRPPLHPQSKASSNLASIVPPQRNFSTWRSYSLADLQECATSANKANLTNLN Homology
BLAST of CmaCh09G003690 vs. ExPASy TrEMBL
Match: A0A6J1IQH5 (uncharacterized protein LOC111477263 OS=Cucurbita maxima OX=3661 GN=LOC111477263 PE=4 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 7.0e-134 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of CmaCh09G003690 vs. ExPASy TrEMBL
Match: A0A6J1FCW4 (uncharacterized protein LOC111442964 OS=Cucurbita moschata OX=3662 GN=LOC111442964 PE=4 SV=1) HSP 1 Score: 471.1 bits (1211), Expect = 3.1e-129 Identity = 258/264 (97.73%), Postives = 260/264 (98.48%), Query Frame = 0
BLAST of CmaCh09G003690 vs. ExPASy TrEMBL
Match: A0A6J1FT55 (uncharacterized protein LOC111446629 OS=Cucurbita moschata OX=3662 GN=LOC111446629 PE=4 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 3.1e-113 Identity = 235/265 (88.68%), Postives = 250/265 (94.34%), Query Frame = 0
BLAST of CmaCh09G003690 vs. ExPASy TrEMBL
Match: A0A6J1J4F7 (uncharacterized protein LOC111481236 OS=Cucurbita maxima OX=3661 GN=LOC111481236 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.5e-112 Identity = 233/265 (87.92%), Postives = 250/265 (94.34%), Query Frame = 0
BLAST of CmaCh09G003690 vs. ExPASy TrEMBL
Match: A0A0A0L451 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G648530 PE=4 SV=1) HSP 1 Score: 407.5 bits (1046), Expect = 4.2e-110 Identity = 227/266 (85.34%), Postives = 247/266 (92.86%), Query Frame = 0
BLAST of CmaCh09G003690 vs. NCBI nr
Match: XP_022977094.1 (uncharacterized protein LOC111477263 [Cucurbita maxima] >XP_022977095.1 uncharacterized protein LOC111477263 [Cucurbita maxima]) HSP 1 Score: 486.5 bits (1251), Expect = 1.5e-133 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
BLAST of CmaCh09G003690 vs. NCBI nr
Match: XP_022936302.1 (uncharacterized protein LOC111442964 [Cucurbita moschata] >XP_022936303.1 uncharacterized protein LOC111442964 [Cucurbita moschata]) HSP 1 Score: 471.1 bits (1211), Expect = 6.3e-129 Identity = 258/264 (97.73%), Postives = 260/264 (98.48%), Query Frame = 0
BLAST of CmaCh09G003690 vs. NCBI nr
Match: KAG7024377.1 (Guanine nucleotide-binding protein alpha-2 subunit, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 462.2 bits (1188), Expect = 2.9e-126 Identity = 253/258 (98.06%), Postives = 255/258 (98.84%), Query Frame = 0
BLAST of CmaCh09G003690 vs. NCBI nr
Match: KAG6591493.1 (hypothetical protein SDJN03_13839, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 460.3 bits (1183), Expect = 1.1e-125 Identity = 252/257 (98.05%), Postives = 254/257 (98.83%), Query Frame = 0
BLAST of CmaCh09G003690 vs. NCBI nr
Match: XP_023534916.1 (uncharacterized protein LOC111796503 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023534917.1 uncharacterized protein LOC111796503 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 458.0 bits (1177), Expect = 5.5e-125 Identity = 251/258 (97.29%), Postives = 254/258 (98.45%), Query Frame = 0
BLAST of CmaCh09G003690 vs. TAIR 10
Match: AT5G21940.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 144.1 bits (362), Expect = 1.6e-34 Identity = 106/235 (45.11%), Postives = 149/235 (63.40%), Query Frame = 0
BLAST of CmaCh09G003690 vs. TAIR 10
Match: AT3G43850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21940.1); Has 215 Blast hits to 215 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 213; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 100.9 bits (250), Expect = 1.6e-21 Identity = 71/157 (45.22%), Postives = 99/157 (63.06%), Query Frame = 0
BLAST of CmaCh09G003690 vs. TAIR 10
Match: AT5G24890.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24550.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.5 bits (145), Expect = 2.4e-09 Identity = 45/116 (38.79%), Postives = 65/116 (56.03%), Query Frame = 0
BLAST of CmaCh09G003690 vs. TAIR 10
Match: AT2G24550.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31510.1); Has 219 Blast hits to 219 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 2; Plants - 184; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 7.0e-09 Identity = 53/159 (33.33%), Postives = 86/159 (54.09%), Query Frame = 0
BLAST of CmaCh09G003690 vs. TAIR 10
Match: AT5G56550.1 (oxidative stress 3 ) HSP 1 Score: 48.1 bits (113), Expect = 1.2e-05 Identity = 39/109 (35.78%), Postives = 63/109 (57.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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