CmaCh09G003550 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G003550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	17.3 kDa class II heat shock protein-like
Location	Cma_Chr09: 1467748 .. 1468218 (-)
RNA-Seq Expression	CmaCh09G003550
Synteny	CmaCh09G003550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTCAGAGTCATGGGCTTGGACTCCCCACTCTTCTCCACCCTCCAGCACGTGATGGACTTCGCCGACGACGCCGACAAGTCTTTCAGCGCCCCGACCCGTACCTACGTACGGGACGCCAAGGCCATGGCAGCCACTCCGGCCGACGTCAAGGAGTACCCGAATTCCTATGTTTTTGTCGTCGACATGCCGGGGTTGAAGGTTGGTGACATCAAGGTTCAGGTAGAGGAAGACAATGTGCTACTGGTAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCCAAGTACGTAAGGATGGAGAGAAGAGTCGGCAAGTTTATGAGGAAATTTGTGTTGCCGGAAAATGCCAACACGGATGCCATTACGGCGGTTTGTCAGGACGGTGTGCTTACTGTGACTGTGCAAAAGTTGCCACCACCGGAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

mRNA sequence

ATGGATCTCAGAGTCATGGGCTTGGACTCCCCACTCTTCTCCACCCTCCAGCACGTGATGGACTTCGCCGACGACGCCGACAAGTCTTTCAGCGCCCCGACCCGTACCTACGTACGGGACGCCAAGGCCATGGCAGCCACTCCGGCCGACGTCAAGGAGTACCCGAATTCCTATGTTTTTGTCGTCGACATGCCGGGGTTGAAGGTTGGTGACATCAAGGTTCAGGTAGAGGAAGACAATGTGCTACTGGTAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCCAAGTACGTAAGGATGGAGAGAAGAGTCGGCAAGTTTATGAGGAAATTTGTGTTGCCGGAAAATGCCAACACGGATGCCATTACGGCGGTTTGTCAGGACGGTGTGCTTACTGTGACTGTGCAAAAGTTGCCACCACCGGAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

Coding sequence (CDS)

ATGGATCTCAGAGTCATGGGCTTGGACTCCCCACTCTTCTCCACCCTCCAGCACGTGATGGACTTCGCCGACGACGCCGACAAGTCTTTCAGCGCCCCGACCCGTACCTACGTACGGGACGCCAAGGCCATGGCAGCCACTCCGGCCGACGTCAAGGAGTACCCGAATTCCTATGTTTTTGTCGTCGACATGCCGGGGTTGAAGGTTGGTGACATCAAGGTTCAGGTAGAGGAAGACAATGTGCTACTGGTAAGTGGCGAGAGGAAGAGGGAGGAGGAGAAAGAAGGGGCCAAGTACGTAAGGATGGAGAGAAGAGTCGGCAAGTTTATGAGGAAATTTGTGTTGCCGGAAAATGCCAACACGGATGCCATTACGGCGGTTTGTCAGGACGGTGTGCTTACTGTGACTGTGCAAAAGTTGCCACCACCGGAGCCTAAGAAGCCCAAGATCGTTGAGGTCAAGGTCAATTGA

Protein sequence

MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANTDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN

Homology

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BLAST of CmaCh09G003550 vs. ExPASy Swiss-Prot
Match: P05477 (17.9 kDa class II heat shock protein OS=Glycine max OX=3847 GN=HSP17.9-D PE=3 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.4e-65
Identity = 125/158 (79.11%), Postives = 144/158 (91.14%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFADDA---DKSFSAPTRTYVRDAKAMAATPADVKEYPNS 60
           MD RVMGL+SPLF TLQH+MD ++D    +K+ +APT +YVRDAKAMAATPADVKEYPNS
Sbjct: 1   MDFRVMGLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNS 60

Query: 61  YVFVVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPE 120
           YVF +DMPGLK GDIKVQVE+DN+LL+ GERKR+EEKEGAKY+RMERRVGK MRKFVLPE
Sbjct: 61  YVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPE 120

Query: 121 NANTDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           NANTDAI+AVCQDGVL+VTVQKLPPPEPKKP+ ++VKV
Sbjct: 121 NANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKV 158

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BLAST of CmaCh09G003550 vs. ExPASy Swiss-Prot
Match: O82013 (17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 4.0e-65
Identity = 128/156 (82.05%), Postives = 143/156 (91.67%), Query Frame = 0


Query: 1   MDLRVMGLD-SPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYV 60
           MDLR++G+D +PLF TL H+M+ A   + S +AP++ YVRDAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLLGIDNTPLFHTLHHMMEAA--GEDSVNAPSKIYVRDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENA 120
           FVVDMPGLK GDIKVQVEEDNVLL+SGERKREEEKEGAK++RMERRVGKFMRKF LPENA
Sbjct: 61  FVVDMPGLKSGDIKVQVEEDNVLLISGERKREEEKEGAKFIRMERRVGKFMRKFSLPENA 120

Query: 121 NTDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           NTDAI+AVCQDGVLTVTVQKLPPPEPKKPK +EVKV
Sbjct: 121 NTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKV 154

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BLAST of CmaCh09G003550 vs. ExPASy Swiss-Prot
Match: P19242 (17.1 kDa class II heat shock protein OS=Pisum sativum OX=3888 GN=HSP17.7 PE=1 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.1e-62
Identity = 118/151 (78.15%), Postives = 137/151 (90.73%), Query Frame = 0


Query: 6   MGLDSPLFSTLQHVMDFADD-ADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDM 65
           M LDSPLF+TL H+MD  DD  +K+ +APTRTYVRDAKAMAATPADVKE+PNSYVF+VDM
Sbjct: 1   MDLDSPLFNTLHHIMDLTDDTTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDM 60

Query: 66  PGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANTDAI 125
           PG+K GDIKVQVE++NVLL+SGERKREEEKEG KY++MERR+GK MRKFVLPENAN +AI
Sbjct: 61  PGVKSGDIKVQVEDENVLLISGERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAI 120

Query: 126 TAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           +A+ QDGVLTVTV KLPPPEPKKPK ++VKV
Sbjct: 121 SAISQDGVLTVTVNKLPPPEPKKPKTIQVKV 151

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BLAST of CmaCh09G003550 vs. ExPASy Swiss-Prot
Match: Q01544 (17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.1e-59
Identity = 119/157 (75.80%), Postives = 136/157 (86.62%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFA-DDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYV 60
           MDLR+MG D PLF    H+MD+A DD   + SAP+RT++ DAKAMAATPADVKEYPNSYV
Sbjct: 1   MDLRLMGFDHPLF---HHIMDYAGDDKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYV 60

Query: 61  FVVDMPGLKVGDIKVQVEEDNVLLVSGERKRE-EEKEGAKYVRMERRVGKFMRKFVLPEN 120
           F++DMPGLK GDIKVQV+ DNVL +SGERKRE EEKEGAKYVRMERRVGK MRKFVLPEN
Sbjct: 61  FIIDMPGLKSGDIKVQVDGDNVLSISGERKREAEEKEGAKYVRMERRVGKLMRKFVLPEN 120

Query: 121 ANTDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           AN + ITAVCQDGVLTVTV+ +PPPEPKKP+ +EVK+
Sbjct: 121 ANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKI 154

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BLAST of CmaCh09G003550 vs. ExPASy Swiss-Prot
Match: Q01545 (18.8 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-2 PE=2 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 4.9e-55
Identity = 116/166 (69.88%), Postives = 134/166 (80.72%), Query Frame = 0


Query: 1   MDLR-----VMGLDSPLFSTLQHVMDFADDADKSFSA----PTRTYVRDAKAMAATPADV 60
           MDLR       GL+  L ST+Q ++DFADD D++  A    P R YVRDAKAMAATPADV
Sbjct: 1   MDLRNFGLSNFGLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADV 60

Query: 61  KEYPNSYVFVVDMPGLKVGDIKVQVEEDNVLLVSGER--KREEEKEGAKYVRMERRVGKF 120
           KEYPNSYVF+ DMPG+K  +IKVQVE+DNVL+VSGER  + ++EK+G KY+RMERRVGKF
Sbjct: 61  KEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKF 120

Query: 121 MRKFVLPENANTDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           MRKFVLPENAN +AI AV QDGVL VTV+KLPPPEPKKPK VEVKV
Sbjct: 121 MRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEVKV 166

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BLAST of CmaCh09G003550 vs. ExPASy TrEMBL
Match: A0A6J1ILE9 (17.3 kDa class II heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111477291 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.9e-79
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

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BLAST of CmaCh09G003550 vs. ExPASy TrEMBL
Match: A0A6J1FE17 (17.3 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111443230 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 2.9e-79
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

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BLAST of CmaCh09G003550 vs. ExPASy TrEMBL
Match: H6TB44 (HSP17.4 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.0e-76
Identity = 148/156 (94.87%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLR+MGLDSP+FSTLQHVMD AD+ADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVE+DNVLL+SGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAI+AVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CmaCh09G003550 vs. ExPASy TrEMBL
Match: A0A6J1FMP1 (17.1 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111446600 PE=3 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 6.3e-74
Identity = 142/156 (91.03%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLR+MGLDSP+FSTL HVMD  D+ADKSF+APTRTYVRDAKAMAATPAD+KEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDAKAMAATPADIKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVE+DNVLL+SGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
            DAI+AVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Sbjct: 121 VDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156

[Close]

BLAST of CmaCh09G003550 vs. ExPASy TrEMBL
Match: A0A6J1J2L5 (17.1 kDa class II heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111481249 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.1e-73
Identity = 141/156 (90.38%), Postives = 150/156 (96.15%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLR+MGLDSP+FSTL HVMD  D+ADKSF+APTRTYVRDA AMAATPAD+KEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLHHVMDLVDEADKSFNAPTRTYVRDANAMAATPADIKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVE+DNVLL+SGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
            DAI+AVCQDGVLTVTVQKLPPPEPKKPK+VEVKVN
Sbjct: 121 IDAISAVCQDGVLTVTVQKLPPPEPKKPKVVEVKVN 156

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BLAST of CmaCh09G003550 vs. NCBI nr
Match: XP_022936723.1 (17.3 kDa class II heat shock protein-like [Cucurbita moschata] >XP_022977130.1 17.3 kDa class II heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 304.3 bits (778), Expect = 6.1e-79
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CmaCh09G003550 vs. NCBI nr
Match: KAG7024363.1 (17.9 kDa class II heat shock protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 303.1 bits (775), Expect = 1.4e-78
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 62  MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 121

Query: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEEDNVLLVSGERKR+EEKEGAKYVRMERRVGKFMRKFVLPENAN
Sbjct: 122 VVDMPGLKVGDIKVQVEEDNVLLVSGERKRDEEKEGAKYVRMERRVGKFMRKFVLPENAN 181

Query: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 182 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 217

[Close]

BLAST of CmaCh09G003550 vs. NCBI nr
Match: XP_023535605.1 (17.9 kDa class II heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.2 bits (770), Expect = 5.1e-78
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLRVMGLDSPLFSTLQ VMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRVMGLDSPLFSTLQQVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120

Query: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CmaCh09G003550 vs. NCBI nr
Match: ADU55791.1 (HSP17.4 [Citrullus lanatus])

HSP 1 Score: 293.9 bits (751), Expect = 8.2e-76
Identity = 148/156 (94.87%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MDLRVMGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60
           MDLR+MGLDSP+FSTLQHVMD AD+ADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF
Sbjct: 1   MDLRIMGLDSPIFSTLQHVMDLADEADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVF 60

Query: 61  VVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENAN 120
           VVDMPGLKVGDIKVQVE+DNVLL+SGERKREEEKEGAKYVRMERRVGK MRKFVLPENAN
Sbjct: 61  VVDMPGLKVGDIKVQVEDDNVLLISGERKREEEKEGAKYVRMERRVGKLMRKFVLPENAN 120

Query: 121 TDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           TDAI+AVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 TDAISAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 156

[Close]

BLAST of CmaCh09G003550 vs. NCBI nr
Match: KAG6591479.1 (17.9 kDa class II heat shock protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293.9 bits (751), Expect = 8.2e-76
Identity = 150/151 (99.34%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 6   MGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMP 65
           MGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMP
Sbjct: 1   MGLDSPLFSTLQHVMDFADDADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMP 60

Query: 66  GLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRMERRVGKFMRKFVLPENANTDAIT 125
           GLKVGDIKVQVEEDNVLLVSGERKR+EEKEGAKYVRMERRVGKFMRKFVLPENANTDAIT
Sbjct: 61  GLKVGDIKVQVEEDNVLLVSGERKRDEEKEGAKYVRMERRVGKFMRKFVLPENANTDAIT 120

Query: 126 AVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           AVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN
Sbjct: 121 AVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 151

[Close]

BLAST of CmaCh09G003550 vs. TAIR 10
Match: AT5G12020.1 (17.6 kDa class II heat shock protein )

HSP 1 Score: 191.4 bits (485), Expect = 5.3e-49
Identity = 99/148 (66.89%), Postives = 123/148 (83.11%), Query Frame = 0


Query: 11  PLFSTLQHVMDFADD--ADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLK 70
           P+ S L+ +++  +D   +K+ + P+R Y+RDAKAMAATPADV E+PN+Y FVVDMPG+K
Sbjct: 7   PIISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIK 66

Query: 71  VGDIKVQVEEDNVLLVSGERKRE-EEKEGAKYVRMERRVGKFMRKFVLPENANTDAITAV 130
             +IKVQVE DNVL+VSGER+RE +E EG KYVRMERR+GKFMRKF LPENA+ D I+AV
Sbjct: 67  GDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAV 126

Query: 131 CQDGVLTVTVQKLPPPEPKKPKIVEVKV 156
           C DGVL VTVQKLPPPEPKKPK ++V+V
Sbjct: 127 CHDGVLKVTVQKLPPPEPKKPKTIQVQV 154

[Close]

BLAST of CmaCh09G003550 vs. TAIR 10
Match: AT5G12030.1 (heat shock protein 17.6A )

HSP 1 Score: 176.4 bits (446), Expect = 1.8e-44
Identity = 87/147 (59.18%), Postives = 122/147 (82.99%), Query Frame = 0


Query: 11  PLFSTLQHVMDFADD-ADKSFSAPTRTYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKV 70
           P+FS L+ +++  ++  +K+ + P+R Y+RDAKAMAATPADV E+P++YVF VDMPG+K 
Sbjct: 9   PIFSILEDMLEAPEEQTEKTRNNPSRAYMRDAKAMAATPADVIEHPDAYVFAVDMPGIKG 68

Query: 71  GDIKVQVEEDNVLLVSGERKRE-EEKEGAKYVRMERRVGKFMRKFVLPENANTDAITAVC 130
            +I+VQ+E +NVL+VSG+R+R+ +E EG K+VRMERR+GKFMRKF LP+NA+ + I+A C
Sbjct: 69  DEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAAC 128

Query: 131 QDGVLTVTVQKLPPPEPKKPKIVEVKV 156
            DGVL VT+ KLPPPEPKKPK ++V+V
Sbjct: 129 NDGVLKVTIPKLPPPEPKKPKTIQVQV 155

[Close]

BLAST of CmaCh09G003550 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 102.4 bits (254), Expect = 3.3e-22
Identity = 54/118 (45.76%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 39  RDAKAMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAK 98
           RD  A      D KE P ++VF  D+PGLK  ++KV+VE+ NVL +SGER +E E++  K
Sbjct: 44  RDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDK 103

Query: 99  YVRMERRVGKFMRKFVLPENANTDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           + R+ER  GKFMR+F LPENA  + + A  ++GVLTV V K P    KKP++  + ++
Sbjct: 104 WHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPKAP---EKKPQVKSIDIS 158

[Close]

BLAST of CmaCh09G003550 vs. TAIR 10
Match: AT1G54050.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.6e-21
Identity = 53/114 (46.49%), Postives = 84/114 (73.68%), Query Frame = 0


Query: 48  PADVKEYPNSYVFVVDMPGLKVGDIKVQVEEDNVLLV--SGERKR--EEEKEGAKYVRME 107
           P D+ E P  Y+F +D+PG+   DI+V VEE+  L++  +G+RKR  +E +EG+KY+R+E
Sbjct: 43  PIDILESPKEYIFYLDIPGISKSDIQVTVEEERTLVIKSNGKRKRDDDESEEGSKYIRLE 102

Query: 108 RRVGK-FMRKFVLPENANTDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEVKVN 157
           RR+ +  ++KF LPE+A+  ++TA  Q+GVLTV ++KL PP+P KPK V++ V+
Sbjct: 103 RRLAQNLVKKFRLPEDADMASVTAKYQEGVLTVVIKKL-PPQPPKPKTVQIAVS 155

[Close]

BLAST of CmaCh09G003550 vs. TAIR 10
Match: AT4G10250.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 99.8 bits (247), Expect = 2.1e-21
Identity = 49/111 (44.14%), Postives = 78/111 (70.27%), Query Frame = 0


Query: 43  AMAATPADVKEYPNSYVFVVDMPGLKVGDIKVQVEEDNVLLVSGERKREEEKEGAKYVRM 102
           A++    D KE    +  ++D+PGLK  ++K++VEE+ VL VSGERKREEEK+G ++ R+
Sbjct: 67  ALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENGVLRVSGERKREEEKKGDQWHRV 126

Query: 103 ERRVGKFMRKFVLPENANTDAITAVCQDGVLTVTVQKLPPPEPKKPKIVEV 154
           ER  GKF R+F LP+N + +++ A  ++GVLT+ + KL P + K P++V +
Sbjct: 127 ERSYGKFWRQFKLPDNVDMESVKAKLENGVLTINLTKLSPEKVKGPRVVNI 177

The following BLAST results are available for this feature:

BLAST of CmaCh09G003550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05477	1.4e-65	79.11	17.9 kDa class II heat shock protein OS=Glycine max OX=3847 GN=HSP17.9-D PE=3 SV...	[more]
O82013	4.0e-65	82.05	17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1	[more]
P19242	3.1e-62	78.15	17.1 kDa class II heat shock protein OS=Pisum sativum OX=3888 GN=HSP17.7 PE=1 SV...	[more]
Q01544	1.1e-59	75.80	17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1	[more]
Q01545	4.9e-55	69.88	18.8 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-2 PE=2 SV=1	[more]

BLAST of CmaCh09G003550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ILE9	2.9e-79	100.00	17.3 kDa class II heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1FE17	2.9e-79	100.00	17.3 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
H6TB44	4.0e-76	94.87	HSP17.4 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A6J1FMP1	6.3e-74	91.03	17.1 kDa class II heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1J2L5	3.1e-73	90.38	17.1 kDa class II heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of CmaCh09G003550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936723.1	6.1e-79	100.00	17.3 kDa class II heat shock protein-like [Cucurbita moschata] >XP_022977130.1 1...	[more]
KAG7024363.1	1.4e-78	99.36	17.9 kDa class II heat shock protein, partial [Cucurbita argyrosperma subsp. arg...	[more]
XP_023535605.1	5.1e-78	99.36	17.9 kDa class II heat shock protein-like [Cucurbita pepo subsp. pepo]	[more]
ADU55791.1	8.2e-76	94.87	HSP17.4 [Citrullus lanatus]	[more]
KAG6591479.1	8.2e-76	99.34	17.9 kDa class II heat shock protein, partial [Cucurbita argyrosperma subsp. sor...	[more]

BLAST of CmaCh09G003550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12020.1	5.3e-49	66.89	17.6 kDa class II heat shock protein	[more]
AT5G12030.1	1.8e-44	59.18	heat shock protein 17.6A	[more]
AT5G59720.1	3.3e-22	45.76	heat shock protein 18.2	[more]
AT1G54050.1	1.6e-21	46.49	HSP20-like chaperones superfamily protein	[more]
AT4G10250.1	2.1e-21	44.14	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 50..153 e-value: 2.1E-30 score: 104.9
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 40..156 score: 29.330328
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 9..154 e-value: 1.5E-40 score: 140.3
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 13..150
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 8..155
None	No IPR available	PANTHER	PTHR11527:SF260	18.0 KDA CLASS II HEAT SHOCK PROTEIN	coord: 8..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G003550.1	CmaCh09G003550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding