CmaCh09G003340 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G003340
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Protein conserved in the green lineage and diatoms 27, chloroplastic
Location	Cma_Chr09: 1376247 .. 1377398 (-)
RNA-Seq Expression	CmaCh09G003340
Synteny	CmaCh09G003340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGCCCGGTAGTCGGGAACCAAATACCTGTGACCTGAGTCATGTATATACTCCCGGGAAAACCATCGCCGGCGACTTTCTTTCCGTCCGCAACGAACCCCAGACCACTAATTTCACCGTTCAAAAACCCAAGACCATTCCACCTCCGAAATTCCCCTTCCAGAATATCCCTCTCCTTCTCTTTCCGAAAAGGAAACAACATGCCATCGGATACCGGCTGCCCTGTTCCGCCGGAGCAGCTGCCGATTAACGAATATCAGACTCTCTCCACCTCTTTCCCCTTCTCCTGGGCTGTCGGAGATATAGTTGAATACTGTTCTCGATTGGTCGCCACCGGTGCTTCCTTTGCGTTCTTCATCGGACTGCCGGTTGCTTGGTTCGGCACCGTGGGGGTCGAATCGGATCTGTTGAGTCGATCACTTTGCGCTGTTTCAAGTGGAATATTATTCGTTACGATCGCGGTTGTCAGGATGTATCTCGGTTGGGCTTACGTCGGTAACCGTCTACTCAGTGCGACTGTAGAATGTAAACTCTCATTTCTGTGTTTCTTACTTTTAGCCCTAGAATCGCAGTTCTTCGTTCAAAGATAGTACTGGATTCTTTTCTTTCCATGTCAAGTGAAAAAAATTTCATCATCGTTCTGAAATTTTCCTTTATACAGACGAAGAGACCGGATGGTACGACGGCCAGGTACACTCAGACAGTTCTTCTTCCTTTGCTCATAGGATCAAGGTTCCATTTCATCTCTGAAATTAAGAGCTCATGTTTGCAGATTTGGGTAAAAACCGCCGAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTAAGCAACCGATCTCGATCCTAATTTCGACTTCCTCTCCATAAATCCAAGTTTCAGTTGCAATTTAGAAATCTTCTCAGGTGAAGCCGGTGCTCAGTAGGCTAAAATACACTCTCGTTAGCCTTGCGGCATCTCTGTTTGTGTCCATTATTGTGCTCATCAACATTGATGGAGGCCAATTGCTGGGGCCTTTCTTCACCGGAAAATATGCAGCAGATGACGGCAGCAGCAGGGTCATTCCCGGCGTTTATAGCGACGAATCCGCCAGATCTTTCGAGCCTGATGCGTTCTGTGGGCCTGGCGAAGATGATCTTCCTCGATGA

mRNA sequence

GTTGCCCGGTAGTCGGGAACCAAATACCTGTGACCTGAGTCATGTATATACTCCCGGGAAAACCATCGCCGGCGACTTTCTTTCCGTCCGCAACGAACCCCAGACCACTAATTTCACCGTTCAAAAACCCAAGACCATTCCACCTCCGAAATTCCCCTTCCAGAATATCCCTCTCCTTCTCTTTCCGAAAAGGAAACAACATGCCATCGGATACCGGCTGCCCTGTTCCGCCGGAGCAGCTGCCGATTAACGAATATCAGACTCTCTCCACCTCTTTCCCCTTCTCCTGGGCTGTCGGAGATATAGTTGAATACTGTTCTCGATTGGTCGCCACCGGTGCTTCCTTTGCGTTCTTCATCGGACTGCCGGTTGCTTGGTTCGGCACCGTGGGGGTCGAATCGGATCTGTTGAGTCGATCACTTTGCGCTGTTTCAAGTGGAATATTATTCGTTACGATCGCGGTTGTCAGGATGTATCTCGGTTGGGCTTACGTCGGTAACCGTCTACTCAGTGCGACTGTAGAATACGAAGAGACCGGATGGTACGACGGCCAGATTTGGGTAAAAACCGCCGAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTGAAGCCGGTGCTCAGTAGGCTAAAATACACTCTCGTTAGCCTTGCGGCATCTCTGTTTGTGTCCATTATTGTGCTCATCAACATTGATGGAGGCCAATTGCTGGGGCCTTTCTTCACCGGAAAATATGCAGCAGATGACGGCAGCAGCAGGGTCATTCCCGGCGTTTATAGCGACGAATCCGCCAGATCTTTCGAGCCTGATGCGTTCTGTGGGCCTGGCGAAGATGATCTTCCTCGATGA

Coding sequence (CDS)

ATGTATATACTCCCGGGAAAACCATCGCCGGCGACTTTCTTTCCGTCCGCAACGAACCCCAGACCACTAATTTCACCGTTCAAAAACCCAAGACCATTCCACCTCCGAAATTCCCCTTCCAGAATATCCCTCTCCTTCTCTTTCCGAAAAGGAAACAACATGCCATCGGATACCGGCTGCCCTGTTCCGCCGGAGCAGCTGCCGATTAACGAATATCAGACTCTCTCCACCTCTTTCCCCTTCTCCTGGGCTGTCGGAGATATAGTTGAATACTGTTCTCGATTGGTCGCCACCGGTGCTTCCTTTGCGTTCTTCATCGGACTGCCGGTTGCTTGGTTCGGCACCGTGGGGGTCGAATCGGATCTGTTGAGTCGATCACTTTGCGCTGTTTCAAGTGGAATATTATTCGTTACGATCGCGGTTGTCAGGATGTATCTCGGTTGGGCTTACGTCGGTAACCGTCTACTCAGTGCGACTGTAGAATACGAAGAGACCGGATGGTACGACGGCCAGATTTGGGTAAAAACCGCCGAAGTTTTAGCCCGCGATCGCCTCCTCGGTTCCTACACTGTGAAGCCGGTGCTCAGTAGGCTAAAATACACTCTCGTTAGCCTTGCGGCATCTCTGTTTGTGTCCATTATTGTGCTCATCAACATTGATGGAGGCCAATTGCTGGGGCCTTTCTTCACCGGAAAATATGCAGCAGATGACGGCAGCAGCAGGGTCATTCCCGGCGTTTATAGCGACGAATCCGCCAGATCTTTCGAGCCTGATGCGTTCTGTGGGCCTGGCGAAGATGATCTTCCTCGATGA

Protein sequence

MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGCPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVESDLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSSRVIPGVYSDESARSFEPDAFCGPGEDDLPR

Homology

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BLAST of CmaCh09G003340 vs. ExPASy Swiss-Prot
Match: Q9FN15 (Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CGLD27 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.6e-29
Identity = 81/175 (46.29%), Postives = 104/175 (59.43%), Query Frame = 0


Query: 43  SLSFSFRKGNNMPSDTGCPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASF 102
           S+SFS   G +    +   VP +Q P+NEY +L     +SW      E+  RL       
Sbjct: 70  SMSFS---GQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYSWGELGPSEFFIRLGGLWLVT 129

Query: 103 AFFIGLPVAWFGTVGVESDLLSRSLCAVSSGILF-VTIAVVRMYLGWAYVGNRLLSATVE 162
              +G+PVA          L  R + A  +G LF V++ V+R+YLGW+YVG+RLLSA + 
Sbjct: 130 FTVLGVPVAAASFNPSREPL--RFILAAGTGTLFLVSLIVLRIYLGWSYVGDRLLSAVIP 189

Query: 163 YEETGWYDGQIWVKTAEVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVL 217
           YEE+GWYDGQ+WVK  EVLARDRLLGSY VKPV+  LK TL+   A L VS  VL
Sbjct: 190 YEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKMLKQTLIGTGA-LLVSAFVL 238

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BLAST of CmaCh09G003340 vs. ExPASy Swiss-Prot
Match: P48276 (Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.4e-27
Identity = 64/145 (44.14%), Postives = 93/145 (64.14%), Query Frame = 0


Query: 58  TGCPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVG 117
           T CP+P EQ P+NEYQ L+ S  F+W    +  Y   L  T  S  F +   + ++  + 
Sbjct: 3   TFCPIPTEQQPLNEYQILNNSVLFNWPSQKLKIYFFYLF-TIYSIGFLLTFLITFYNDLF 62

Query: 118 VESDLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTA 177
           +    ++  +  +  G   + + ++R+YLGW+Y+  RLLSATV YEE+GWYDGQIWVK++
Sbjct: 63  IVHP-VNIFVHGIIGGNFVLILDLLRLYLGWSYICQRLLSATVSYEESGWYDGQIWVKSS 122

Query: 178 EVLARDRLLGSYTVKPVLSRLKYTL 203
           EVL +DRL+G Y V+PVL+RLK TL
Sbjct: 123 EVLIQDRLIGIYQVRPVLNRLKQTL 145

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BLAST of CmaCh09G003340 vs. ExPASy Swiss-Prot
Match: P51273 (Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 3.4e-24
Identity = 62/158 (39.24%), Postives = 91/158 (57.59%), Query Frame = 0


Query: 60  CPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIG-----------L 119
           CPVP EQ P+NEY +L  S+ F W       Y  ++  T  +  F +            L
Sbjct: 8   CPVPLEQQPVNEYNSLKNSWFFCWPTLSSHSYNKKITITLIATCFLVSPVLLSIFPIAKL 67

Query: 120 PVAWFGTVGVESDLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWY 179
           P+ +F +  + S L++   C +          ++R+YLGW+YV  RL+SATV YEE+GWY
Sbjct: 68  PLKFFFSEFIISSLIT---CFI----------LIRLYLGWSYVVKRLMSATVFYEESGWY 127

Query: 180 DGQIWVKTAEVLARDRLLGSYTVKPVLSRLKYTLVSLA 207
           DGQIWVK +E+L +DR +G Y V P+L+++K TL  L+
Sbjct: 128 DGQIWVKPSEILVKDRFIGLYEVFPLLNKIKNTLSCLS 152

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BLAST of CmaCh09G003340 vs. ExPASy Swiss-Prot
Match: Q1XDL3 (Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.5e-22
Identity = 66/172 (38.37%), Postives = 98/172 (56.98%), Query Frame = 0


Query: 57  DTGCPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSR---------LVATGASFAFF-- 116
           +T CPVP EQ P++EY +L  S+ F W       Y  +         L+ +    + F  
Sbjct: 5   NTQCPVPKEQQPVHEYTSLKNSWFFCWPTLSRRSYNKKITIALLLNCLLVSPILLSIFPI 64

Query: 117 IGLPVAWFGTVGVESDLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEET 176
             LP+ +F +  + S L++  +             ++R+YLGW+YV  RL+SATV YEE+
Sbjct: 65  TKLPLKFFFSEFITSSLMTGFI-------------LIRLYLGWSYVVKRLMSATVFYEES 124

Query: 177 GWYDGQIWVKTAEVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLI 218
           GWYDGQIWVK +E+L +DR +G Y V P+L+++K TL  L  SL +S  VL+
Sbjct: 125 GWYDGQIWVKPSEILLKDRFIGLYEVFPLLNKIKNTLSFL--SLMISGPVLL 161

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BLAST of CmaCh09G003340 vs. ExPASy Swiss-Prot
Match: O78501 (Uncharacterized protein ycf36 OS=Guillardia theta OX=55529 GN=ycf36 PE=3 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20
Identity = 57/140 (40.71%), Postives = 79/140 (56.43%), Query Frame = 0


Query: 60  CPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVE 119
           CPVP  QLPINEY  L++++ FSWA      Y   L+        F  + + +  +   E
Sbjct: 3   CPVPENQLPINEYNKLTSAWDFSWACKIGKLYYKFLLKMQLCLFLFFCICLNFLDS-KYE 62

Query: 120 SDLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEV 179
           + L S  L       LF+ +  +R YLG+ Y+  RLL + + YEE+ WYDGQ+WVK    
Sbjct: 63  TGLYSLIL-----STLFICLICLRTYLGFRYIYVRLLKSALPYEESSWYDGQVWVKNINY 122

Query: 180 LARDRLLGSYTVKPVLSRLK 200
           L +DRL+  YTV P+LSRLK
Sbjct: 123 LIKDRLVADYTVLPILSRLK 136

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BLAST of CmaCh09G003340 vs. ExPASy TrEMBL
Match: A0A6J1IHH1 (uncharacterized protein ycf36 OS=Cucurbita maxima OX=3661 GN=LOC111477262 PE=4 SV=1)

HSP 1 Score: 542.7 bits (1397), Expect = 8.5e-151
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC
Sbjct: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120

Query: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL
Sbjct: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240
           ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS
Sbjct: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLPR 271
           RVIPGVYSDESARSFEPDAFCGPGEDDLPR
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLPR 270

[Close]

BLAST of CmaCh09G003340 vs. ExPASy TrEMBL
Match: A0A6J1FDI1 (uncharacterized protein ycf36 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111443023 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 263/269 (97.77%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPGKPSPATFFPSA NPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC
Sbjct: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFA FIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           D LSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL
Sbjct: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240
           ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDG QLLGPFFTGKYAADD SS
Sbjct: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLP 270
           RVIPGVYSDESARSFEPDAFCG GEDDLP
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGRGEDDLP 269

[Close]

BLAST of CmaCh09G003340 vs. ExPASy TrEMBL
Match: A0A6J1F7C1 (uncharacterized protein ycf36 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111443023 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 263/269 (97.77%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPGKPSPATFFPSA NPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC
Sbjct: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFA FIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           D LSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL
Sbjct: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240
           ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDG QLLGPFFTGKYAADD SS
Sbjct: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLP 270
           RVIPGVYSDESARSFEPDAFCG GEDDLP
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGRGEDDLP 269

[Close]

BLAST of CmaCh09G003340 vs. ExPASy TrEMBL
Match: A0A6J1F8B7 (uncharacterized protein ycf36 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111443023 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.4e-145
Identity = 263/269 (97.77%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPGKPSPATFFPSA NPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC
Sbjct: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFA FIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           D LSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL
Sbjct: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240
           ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDG QLLGPFFTGKYAADD SS
Sbjct: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLP 270
           RVIPGVYSDESARSFEPDAFCG GEDDLP
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGRGEDDLP 269

[Close]

BLAST of CmaCh09G003340 vs. ExPASy TrEMBL
Match: A0A0A0L3Z3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646010 PE=4 SV=1)

HSP 1 Score: 462.6 bits (1189), Expect = 1.1e-126
Identity = 232/268 (86.57%), Postives = 243/268 (90.67%), Query Frame = 0


Query: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPG  SP TF  S  N RPLISPF N R  HLRNS SR+ LSFSFRKG+N+P +TGC
Sbjct: 1   MYILPGSASPPTFLLSVPNSRPLISPFTNTRLLHLRNSVSRMPLSFSFRKGSNVPPETGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLS SFPFSWA GDIVE+CSRLVATGASFA FIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSASFPFSWAAGDIVEFCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           D L  SLCAVSSGILFVTIAV+RMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTA+VL
Sbjct: 121 DPLKLSLCAVSSGILFVTIAVLRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240
           ARDRLLGSYTVKPVL+RLKYTLVSLAASLFVSI+VLINIDGG+LLGPFFTGK AA+DG  
Sbjct: 181 ARDRLLGSYTVKPVLNRLKYTLVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANDGGG 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEDDL 269
           RVIPGVYSDESARSFEPDAFCGPGE DL
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGPGEHDL 268

[Close]

BLAST of CmaCh09G003340 vs. NCBI nr
Match: XP_022977091.1 (uncharacterized protein ycf36 [Cucurbita maxima] >XP_022977092.1 uncharacterized protein ycf36 [Cucurbita maxima] >XP_022977093.1 uncharacterized protein ycf36 [Cucurbita maxima])

HSP 1 Score: 542.7 bits (1397), Expect = 1.8e-150
Identity = 270/270 (100.00%), Postives = 270/270 (100.00%), Query Frame = 0


Query: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC
Sbjct: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120

Query: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL
Sbjct: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240
           ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS
Sbjct: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLPR 271
           RVIPGVYSDESARSFEPDAFCGPGEDDLPR
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLPR 270

[Close]

BLAST of CmaCh09G003340 vs. NCBI nr
Match: XP_023535539.1 (uncharacterized protein ycf36 [Cucurbita pepo subsp. pepo] >XP_023535540.1 uncharacterized protein ycf36 [Cucurbita pepo subsp. pepo] >XP_023535542.1 uncharacterized protein ycf36 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 527.3 bits (1357), Expect = 7.6e-146
Identity = 264/270 (97.78%), Postives = 265/270 (98.15%), Query Frame = 0


Query: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPGKPSPATFFPSA NPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC
Sbjct: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFA FIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           D LSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL
Sbjct: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240
           ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLL PFFTGKYAADDGSS
Sbjct: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLRPFFTGKYAADDGSS 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLPR 271
           RVIPGVYSDESARSFEPDAFCG GEDDLP+
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGRGEDDLPQ 270

[Close]

BLAST of CmaCh09G003340 vs. NCBI nr
Match: XP_022936391.1 (uncharacterized protein ycf36 isoform X2 [Cucurbita moschata])

HSP 1 Score: 525.4 bits (1352), Expect = 2.9e-145
Identity = 263/269 (97.77%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPGKPSPATFFPSA NPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC
Sbjct: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFA FIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           D LSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL
Sbjct: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240
           ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDG QLLGPFFTGKYAADD SS
Sbjct: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLP 270
           RVIPGVYSDESARSFEPDAFCG GEDDLP
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGRGEDDLP 269

[Close]

BLAST of CmaCh09G003340 vs. NCBI nr
Match: XP_022936388.1 (uncharacterized protein ycf36 isoform X1 [Cucurbita moschata] >XP_022936390.1 uncharacterized protein ycf36 isoform X1 [Cucurbita moschata])

HSP 1 Score: 525.4 bits (1352), Expect = 2.9e-145
Identity = 263/269 (97.77%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPGKPSPATFFPSA NPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC
Sbjct: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFA FIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           D LSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL
Sbjct: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240
           ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDG QLLGPFFTGKYAADD SS
Sbjct: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLP 270
           RVIPGVYSDESARSFEPDAFCG GEDDLP
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGRGEDDLP 269

[Close]

BLAST of CmaCh09G003340 vs. NCBI nr
Match: XP_022936392.1 (uncharacterized protein ycf36 isoform X3 [Cucurbita moschata])

HSP 1 Score: 525.4 bits (1352), Expect = 2.9e-145
Identity = 263/269 (97.77%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 1   MYILPGKPSPATFFPSATNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60
           MYILPGKPSPATFFPSA NPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC
Sbjct: 1   MYILPGKPSPATFFPSAPNPRPLISPFKNPRPFHLRNSPSRISLSFSFRKGNNMPSDTGC 60

Query: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVES 120
           PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFA FIGLPVAWFGTVGVES
Sbjct: 61  PVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFALFIGLPVAWFGTVGVES 120

Query: 121 DLLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180
           D LSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL
Sbjct: 121 DPLSRSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 180

Query: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSS 240
           ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDG QLLGPFFTGKYAADD SS
Sbjct: 181 ARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGSQLLGPFFTGKYAADDSSS 240

Query: 241 RVIPGVYSDESARSFEPDAFCGPGEDDLP 270
           RVIPGVYSDESARSFEPDAFCG GEDDLP
Sbjct: 241 RVIPGVYSDESARSFEPDAFCGRGEDDLP 269

[Close]

BLAST of CmaCh09G003340 vs. TAIR 10
Match: AT5G11840.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 275.0 bits (702), Expect = 6.4e-74
Identity = 152/264 (57.58%), Postives = 186/264 (70.45%), Query Frame = 0


Query: 13  FFPSATNPRPLISPFKNPRPFHLRNSPSR--ISLSFSFRKGNNMPS------DTGCPVPP 72
           F P  ++ +P   P ++ R  H   SP     S    F   N+ P       +T CPVPP
Sbjct: 9   FSPITSSLKP---PSRHRRFLHHNLSPKTPLQSSLIKFGAENSEPQPPRPLPETDCPVPP 68

Query: 73  EQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASFAFFIGLPVAWFGTVGVESDLLS 132
           EQ PINEYQ+LSTSFPFSWA GD++EY +RL  TGASFAFF+GLPV+WFG++G E + + 
Sbjct: 69  EQQPINEYQSLSTSFPFSWASGDLIEYSTRLFLTGASFAFFVGLPVSWFGSIGPEYEPVK 128

Query: 133 RSLCAVSSGILFVTIAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDR 192
           R L A SSGI  VT+AVVRMYLGWAYVGNRLLSATVEYEETGWYDGQ+WVKT EVLARDR
Sbjct: 129 RILAASSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQVWVKTPEVLARDR 188

Query: 193 LLGSYTVKPVLSRLKYTLVSLAASLFVSIIVLINIDGGQLLGPFFTGKYAADDGSSRVIP 252
           LLGS++VKPVL+RLK TLV L     +S+I++IN+    +   + T +    D SS  IP
Sbjct: 189 LLGSFSVKPVLARLKNTLVILG----LSLILVINLGDSPIATSYRTYR-DPRDRSSLPIP 248

Query: 253 GVYSDESARSFEPDAFCGPGEDDL 269
           G Y+DE+AR+FEP+AFCG    DL
Sbjct: 249 GAYNDETARTFEPEAFCGEPSSDL 264

[Close]

BLAST of CmaCh09G003340 vs. TAIR 10
Match: AT5G67370.1 (Protein of unknown function (DUF1230) )

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30
Identity = 81/175 (46.29%), Postives = 104/175 (59.43%), Query Frame = 0


Query: 43  SLSFSFRKGNNMPSDTGCPVPPEQLPINEYQTLSTSFPFSWAVGDIVEYCSRLVATGASF 102
           S+SFS   G +    +   VP +Q P+NEY +L     +SW      E+  RL       
Sbjct: 70  SMSFS---GQSWDPSSEIEVPSDQRPVNEYSSLKEGMLYSWGELGPSEFFIRLGGLWLVT 129

Query: 103 AFFIGLPVAWFGTVGVESDLLSRSLCAVSSGILF-VTIAVVRMYLGWAYVGNRLLSATVE 162
              +G+PVA          L  R + A  +G LF V++ V+R+YLGW+YVG+RLLSA + 
Sbjct: 130 FTVLGVPVAAASFNPSREPL--RFILAAGTGTLFLVSLIVLRIYLGWSYVGDRLLSAVIP 189

Query: 163 YEETGWYDGQIWVKTAEVLARDRLLGSYTVKPVLSRLKYTLVSLAASLFVSIIVL 217
           YEE+GWYDGQ+WVK  EVLARDRLLGSY VKPV+  LK TL+   A L VS  VL
Sbjct: 190 YEESGWYDGQMWVKPPEVLARDRLLGSYKVKPVIKMLKQTLIGTGA-LLVSAFVL 238

The following BLAST results are available for this feature:

BLAST of CmaCh09G003340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FN15	1.6e-29	46.29	Protein CONSERVED IN THE GREEN LINEAGE AND DIATOMS 27, chloroplastic OS=Arabidop...	[more]
P48276	4.4e-27	44.14	Uncharacterized protein ycf36 OS=Cyanophora paradoxa OX=2762 GN=ycf36 PE=3 SV=1	[more]
P51273	3.4e-24	39.24	Uncharacterized protein ycf36 OS=Porphyra purpurea OX=2787 GN=ycf36 PE=3 SV=1	[more]
Q1XDL3	2.5e-22	38.37	Uncharacterized protein ycf36 OS=Pyropia yezoensis OX=2788 GN=ycf36 PE=3 SV=1	[more]
O78501	1.4e-20	40.71	Uncharacterized protein ycf36 OS=Guillardia theta OX=55529 GN=ycf36 PE=3 SV=1	[more]

BLAST of CmaCh09G003340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IHH1	8.5e-151	100.00	uncharacterized protein ycf36 OS=Cucurbita maxima OX=3661 GN=LOC111477262 PE=4 S...	[more]
A0A6J1FDI1	1.4e-145	97.77	uncharacterized protein ycf36 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1F7C1	1.4e-145	97.77	uncharacterized protein ycf36 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1F8B7	1.4e-145	97.77	uncharacterized protein ycf36 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A0A0L3Z3	1.1e-126	86.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G646010 PE=4 SV=1	[more]

BLAST of CmaCh09G003340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977091.1	1.8e-150	100.00	uncharacterized protein ycf36 [Cucurbita maxima] >XP_022977092.1 uncharacterized...	[more]
XP_023535539.1	7.6e-146	97.78	uncharacterized protein ycf36 [Cucurbita pepo subsp. pepo] >XP_023535540.1 uncha...	[more]
XP_022936391.1	2.9e-145	97.77	uncharacterized protein ycf36 isoform X2 [Cucurbita moschata]	[more]
XP_022936388.1	2.9e-145	97.77	uncharacterized protein ycf36 isoform X1 [Cucurbita moschata] >XP_022936390.1 un...	[more]
XP_022936392.1	2.9e-145	97.77	uncharacterized protein ycf36 isoform X3 [Cucurbita moschata]	[more]

BLAST of CmaCh09G003340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G11840.1	6.4e-74	57.58	Protein of unknown function (DUF1230)	[more]
AT5G67370.1	1.1e-30	46.29	Protein of unknown function (DUF1230)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009631	CGLD27-like	PFAM	PF06799	DUF1230	coord: 60..203 e-value: 1.4E-53 score: 180.8
IPR009631	CGLD27-like	PANTHER	PTHR34214	FAMILY NOT NAMED	coord: 9..263
None	No IPR available	PANTHER	PTHR34214:SF1	OS05G0539900 PROTEIN	coord: 9..263

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G003340.1	CmaCh09G003340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009536	plastid