CmaCh09G001030 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G001030
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	BRCA1-A complex subunit BRE
Location	Cma_Chr09: 455522 .. 462865 (+)
RNA-Seq Expression	CmaCh09G001030
Synteny	CmaCh09G001030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGGAAGCATTTTCAAGCATGTTGAGCTGCTCTTTCATCAGTAAATGGAGGCCTCTTGCAGCAGGAGGCTAGTGGTGTGAATTTCTTAAGCTGAATCAGGTGTTTATTGGTGTTTCAGTTGGATTTGACGGTGGCTCTCTAGATCGCTCGCCGGAGATAAACCAAGTAGCTCCGTCGTTTAGCTGCTACAGCCATGTCCTCCGACACTGTACCACCTCTCATTGCTGCTCATATCAATTACCTGCTCAGCCACTTTCCTCTCCCCGTCAAGGTAACATTTCGGATTCCTATCTCTCCCTGGAAATTCAGTGGTAACAAAATTGATGTTGAAATTGATGGTAATGTTTGTACTGGTTTGGAATTAGATTAGTTCACTGAATTGATCGGAAATGAATGATATTGGGTGTTCTTTCTTTCCTTCCTCCCCTTTTCCACCACGAACATAGAATATGATGTCATTATCTTACCGCAATAAGAAACGAGAACGAATAACTTATTCCTACTCTTTCGATATTCAGATTGAGAACATGTGGTCTGGCAGTAGACACTGCCCTGGAATTATTGATAGGTTCACGCTGATCGTACCTTACTGCCTTGAATTCGTCAGATGTAAGACCTGTTTTCCATTGTAGTTTTCATAATATCCTTTCAATTCTTTTCCCTTTCCCTGTATTGAATGCTTTGTAGAGTCACCGTACCTAGCTGTTTGATAGCTCTTACATGTCGTAGGGGACATCATGTACAATGCTGAAACACCATTTTCTGCTCCTGATATTATGTTTGGAGCAGAAGATGAAAATTTCCATCCATTCTCAAGTAAGGTTGATGAAGGAGAACGAGATCATAATTCATTACAGAACTGTCTACGTGACTGGAACAGCAAAGATCCATCACGGCTCACTAGCCTCCTTCAAGAACTAAGGTTTTTCAGGACTTTCCTGTGATTGATCCTTCTTTTCTAATGCCTTGGGTATAACTCACCTTGAATTTAATGGCAACTTTACTTTTTTCAAGGGATCGATATGTGTCGTACCAAAGGAAACGTGTTGAAGGAGTTGATGATGAAAGGTTGAAGTTTGAACTTTGTACTATGTTATCTAGGGAGGTAATGTTCTTCATTATAAGGTTTGATAGACTGTTAACTCTAACTTGGTGATCACTTGCATTAACCTATGAATTTGAGGGGTGAGGTACTGGGCCCGGTGTCTTTGGAATCTGAATGAGACAATTGCTGCCACGGCCAGATAATTATTCCAGATTTTTCACGCTTGAAAAAATCTTAGGGTAGAAGTTTACCGTCCTCAGTATGTGTTTTTTGCTTATAACTATGTATTCCTATTGCTAGGCAAGCGGCTGGACCTTGATGTCTGTGGTTTCTCCTTAAGAATCTTTCATTTACACTGGTTAACTAAATCCAAAAATAATAAATCATACCTATGTGCAGGGAATTGAAATGCATTTGAGTTCAGGTTTTGAGAAGGTAATAGTTTAAAGTATATGGTTACACTTCCCTTGAATATCAGTAAATAGATGAATACTAAGGACTCTATTTTCTCTCTCTTCATTCTTATACATGTCCCTTATATGCCTTTGAACTTTAGCATAGCCAGAGGAGGTCAAATTTGCTGTGCCGCTGGTAGACATTGATATTAACAAGATGATTCCTGGATGCCTGTGGAGGCATCCACAGAAGATATTTTTGCAGGTTTCCTTTTACTTTTCTCTCTCTTTGAACCTCTGGTCTTTCCGTTCCTCTATTTTTCCCGTTCTCATAATTTGTTTGTAGGTTTTATATCCTGTGGTGAGAAAATATGCATCTACTCCTGCTGCACCTCGTCTGAAATTGGTTTCTACATCTGAGTTGAAGGCCCTGTTATCCATTGAGGATATCAAACTTCCTTCATGGATAGATGGAATGTAGGATGCTCTCTCTCTCTTATATCTCCTTTCTAATTCTGTGGCGGTCAGGATTGGGTGCTGAAAGTGATTTCACTTTTCTCTTTTTAACTGACTGCAAGGTGCATGGCTGAATATCTTCCTCACCTAGAAGAGAGTCTTGAGAAACAGGTTGGTTACATTTTTGTTGGTCAGATGGCTCCCTCTGGGTTGTTTAACTGGGCCTTGATTCTGGAAATCGCCAAAAATAGAGTATTTATACTTCTATCATTCTGATGAAGGTTCTGGAGGCAGTTTCATTGATTGATGTTAGGAGAGGCTTTATAGAGGCGTTGGACTCCTTCTTTGGAAGGCCTTTAGAAGCTGACCCGGTGAGACTCCTAAAAATTTATTTTCATCCATCTTCTTCTCCTTTTTAAAGTCCTAAAAATTTATTTCCATCCATCTTCTCCTTTTTAAAGTCGTTATCGAACTATTAATTTATGTGCATGTGCGCGCATGCCCCGGATCAGTAATGGCATGAACTTCTTTGTTTTTTAGGTGTTCTGTCGAACGGCTACAGTTATCACTGCCTCTGGGGTGTTCACATTCCTGGTATTAAGTGACCTTTCCTATACTTAATATGTAGCATCCCATCACTATCAAGAATGTTGTTATATGGAATTTTTCCAATTATTTACTGTGAAAAAGATATTGTTCACGCAACTTTTAGTTGACTCTGGTGATTGGTTTTGATAGCTTTCTTTAACTCTCGACCAGAATAACTGCTTCTCCATCTCCTCAAAATCTTACGTTGTTAGGATTTATTCCCTGTCCAGTAGAGATTCAGATGTAATAATTTTAACTTTGGAGACGATCACCCCCCAAATATTTAGTACAAAATTCCAGAGTCCAGTGATGACAAAGATAGCCCTCAGTTTTTCTTTGTTAGAGAGAATCCTGAAACTAAAGATCCCTCAACATCAAAAACATTACTGTGAATTATTTTCTAAACGGTAAAAAGGAAAAGAAATAAAATTTTGTAGAGAAGATCCAAAGAGAGGCATTGAAGAGAGCGACACTCACTCTAAACTTCCTCTCAAGACCTTTCTACATTCTTGAAGGTTCACCTATTTCTATCTAATCAAATATTCCGGTTAATAATGCAGAACACCGATTGTTCAAGAAGCTGACAAGCTTTGACTTATCCCAACATGCACTTGGATTACCTTTTTCTTTCTTTTGGATAAACCTGTAGTTGGCTTACTAACACTTACCACTGAGAAATCTCTCCAAATCATCACAGAAAAGTGACGTCTGCATAAAATACACCTCCTTGATACAGAACCATAACATGAACCTCGGACAAATTCATAATGTCAAGTTTGATTATGCTGCCGAGGCGTTTGTCAGTTATTGTCCCTGCTGGCTGCAAAATTTTGGATGATACCCAAGACATTTTACAACTATTTATCCTTTCAAATGGTTTCTCCATCCTGTCAAGTTTCTTGAGACATTTCCAGGACATGACTTCACACAAATCTTTCTTTCAAATTGTTAATGGTTTGTTACACTCACGCACACACAAACCATACTCAATCAGTGATGAACGTAATTTGATCTGTAAAAATCCTTTTGGTTTTATATTAAACCAAGATAGTGTGCATTGGTCTGGTCAGGTAGGGTACAGGATGCAGTTCATGATCATTGATCGACAATATGGCTGATTCTAGATTTGAGTCAATGTGCCATCTATTTATTAATATTTTTCCAACTTTATTTATGGTTTTATGTGTGAAAAGTTTTCTTTACTTCATTTTCCTTCCCTTCTGTTTTTGGGAATTTCTTGTTAATGCTAGGCGCACTTCCTCATTTCAAGCCAATTTCCGAAGAAGCAGCCTTCTCTGGTGCTGCAAAGTTCTCAGGTAATGTAGCTTTGTCTTAAATCTTGAAAATTCTCGTACATATCAACTTTGCTTACTAGTTAACATGATTGTATGAGGTCCCCGATTACTATTCCATATACAAGGAGGGGTAAGAAGGGCATTACACCACTGACAAGTTAGTTATGAATTTTCGTGTAAGGTGGGGACAAGGGATTACGTTTAGGAAGGTGAAGTCTGTATAAAGGTTAGGGGATCGAGTACTGTGATATCACGTACTTTGTGTGCTTTGTTTATCATAGAGCCTCCCTGATAGGCTGGGTTACTGTTGTATTCCCCTTTCTGGCATCCTTTTCTCTGATTATCAATGCATAGTAAGGAAGATACCTTACAGATAAGTGCCATAAATATATGCTTGTACGTTTGTTTTCCATCAACATGTCTCCTGTGGTCGTGGGAACTCTTCCTTATAGTTTTGACAGAATTACTGCAGATTTCGTTCTCATTTACATTTTTCATAAATATGTTGATAATGAATCTTTGGTAAACCAATTTTTGTAAGGTTGCACGTCTTGAAGTGATCAAATGACATGATAGGTGCAATTTGTGTAACTCTAGTTTCCAAGGATTTTTCTGTTCGCTATGACTAGGAATGGCATTGTTGAGATGCCCCCTCTTTCTAATTATATCCATATATTGTTTAGCATTTCAACTCCCATGGTGCGCCCATCAAGTCGCAGCTTATTACCGACTATCCTTGGAGTCCTAGGTGGGAGCCATTGCAAATGGCTGAGCGGATTTTGTAAGTTGTCTCTCTGTCTCTCTTTTTTGTTTTTCGTTTGCATAATAATATACATTCAGTAATCAATCATGAATTTACCAATTCGATTGGATGGTAACAGCGAGTTTCTGGCTGATGAGGCTTTGAGCTTCAAGAGGTACTGCAATGAGGCTCAACTTCAATGATTGTGTCATGCAAACCCTGGTCAACGTCAATATTCCGGCCATAAAACAGCCCACTTATATATAGTTGGCAGAGTAGAGTAGTTCTAAATTTTTGTTTTTAGATTGACTTTGCCATCTCCTTGGGGATGCCTGGTTAGTGCTTCCGGATGACTAAAAGGTAGATGATCAAGAACTCATACGAGTTCTCAGATTTAAACCATGATTTGGCATTTTATAACACATTGAATGTTGTTGGAGATTCTCTCTTTTTTCTATGAAATTACCCGATACATTCATTTTGGCATTGAACGTTGCTGGAGATTCTCTCTTTTTTTTTATGAAATTACCCCGATACATCCATTTCAAAATTTTCCAGTCCGTACTTTTAATATCGATGTTTTGGCACATTCATTTCAAAATTTTCTGTACTTTGAATAATATTGATGTTTTGGCATGCAACACCGGGAAGTGTACGGTATACAATTTTCCTAGAGCATGTGTGCTTGGCATGACCTAATCTTGTACTCCCAGCATCTTATTCTTGTACCAGAATGACTTTTTTAACTTTTAATTTTTTATGAGACTTATTCTATTAAAAAATTATTATTTTAATCTTTTAATCTTTTATGAGAAAATTTAATATATTTAGTATGAAATTTACATGCAAAATTTAATATATTTAGTAAATAAAATTTATAGACTTGATTCATATATTTCATTTTAGAGTCGAACCTCAATCAAGCCATTCGGATTTTGGAGGTGTAGCAGCAGCAGCCTCAATCATTTGAAGGCAGATCAATGGCGATTTGGCAACTTATCTACTCTGCTCTACAAGACAGTATCGCTATTCACCATCTTCCTGAAAATTTCTTAGAGATTATATCGATTCTATCTAAAAAATGAATTTTGATCACGGAAAAAAAATGCATGGCAATCAATGATGGTGATGGCGATGGTGAAGATGAGAAAGAAAGAAAAGAAGGAAAGGGAAAAGCTTTGAACATCAGAGTCATGGAAGTATAAGAATGATCATTGCTTGCAGAATTAAAATAAGAAATTAATTGCAAGCTCCTCTTCAATGTTATAGATTCATCATCTGTTCGCCGCTTTTTTGGCCACAAGCATTTTAATAATGCCAAAAACACACACTGAAAAATTACAGAGATGGAGAAACTACGTCGTCTGACTGTACTTTCCAAACCCCTACACCACATCCTTATATAACAGTGAAAGGAGCTTCTAGGGTTTCACTTTCAGAGGCCTGGACCGGCCCAACTCAAGCCCAAGCCCAAGCCCAAACCCTAGCCGTTCAGCCGTTCAGATTTTGTCTTACGCAGATCCACGGTCGAGATTGAAGTTCCTTTCCAATATTTAGTTCCAATTTTTAAGGAAAAAAAACCCAAGGGGAATGAGTGGCCTACCCAAAAATAATTTTTCAAATTATATATATATTTTTTAAATTTGATTTTTATGTTTTGTATATATTTTTTTAAAATTCTAAATTTTGATCGTAATGGTCTCAACAACACAAAATAATAAATTCTGCTGCTCTTACTTAACAACGACTCTCATGTACACTATATTATTCAACACTCTTGACCATTTCTTGACTTCAAAGCTCAAACACTCTAGTAACCAGCTTGATCCTTTCTCTTACGGTACAATATTTCAACTTCGAACGGTTCCCCGAACATTATGAGAAAAGATGCAATGTAATACCTGACAGACTCTTGAATGTACCATTTCTTGACTTCAAAGCTCAAACCGTTTCCCGAACATTAAGAGAAAAGATGCAATGTAATACCCGCACCCGTGTTCATGCCTACTACTCAAAGCAAATTTCATACCAATTATACCCACCTACCCCACCAACCCAACCAAAAAATATTTACCTAACTTCTTAGATTTCTTCACTGTATTCCCTTTCCACAACCCCCTATAAACCGACACCTCTTGCATAACCAATACCCCATCCAGATTTCTAATGGCAGCAACTAAAGGTCTTGTGTTTGCTATGCTTCTTATTTCTTTTGCTTTTGTGCTCCTTATGGAATCAGCCCAAATGGTAATCCTTCTTCCATTTGATTTCTCTGTTCATTTCTGATACTCTCAACTTTGTGGCCTTATTACCTCACTGTATTGTCCTTTCAGGTTATCACAACTCAGGTTGATAGTCCTCTTCCTGACGAGATAGGTAACAGAGAGCTTTGAGCACCTGCACCCACATTTTTATGTTAATGCTTCTTGCTTCCGGACCAATACCTGAATCTATTGCAGATTGTGGGGAAGTTTGTGATGCGAGATGCCAATTATCATCGCGGCAAAAGATCTGCAAGAGGGCATGTGGAACATGCTGCGCTCGCTGTCAATGCGTTCCACCAGGCACTTCAGGCAACTATGATGTTTGTCCCTGCTATGCTAATATGACTACACATGGTGGCAGGCATAAGTGTCCCTAGGCAATGTTCTATAATGATGATGTTACGTCTCAGATCACACATATCCAAAATAAAGAATAATTGAGATAATAACTTCGATTCTAGAAGTATATCAACAAGAATGAATAATGTAGATTTCACTATTTATAGAGGGTTGATGTTCTGAAATGTTCAAAAACTATGCAAAGGTGATGCAAGGGAC

mRNA sequence

TGGGGAAGCATTTTCAAGCATGTTGAGCTGCTCTTTCATCAGTAAATGGAGGCCTCTTGCAGCAGGAGGCTAGTGGTGTGAATTTCTTAAGCTGAATCAGGTGTTTATTGGTGTTTCAGTTGGATTTGACGGTGGCTCTCTAGATCGCTCGCCGGAGATAAACCAAGTAGCTCCGTCGTTTAGCTGCTACAGCCATGTCCTCCGACACTGTACCACCTCTCATTGCTGCTCATATCAATTACCTGCTCAGCCACTTTCCTCTCCCCGTCAAGATTGAGAACATGTGGTCTGGCAGTAGACACTGCCCTGGAATTATTGATAGGTTCACGCTGATCGTACCTTACTGCCTTGAATTCGTCAGATGGGACATCATGTACAATGCTGAAACACCATTTTCTGCTCCTGATATTATGTTTGGAGCAGAAGATGAAAATTTCCATCCATTCTCAAGTAAGGTTGATGAAGGAGAACGAGATCATAATTCATTACAGAACTGTCTACGTGACTGGAACAGCAAAGATCCATCACGGCTCACTAGCCTCCTTCAAGAACTAAGGGATCGATATGTGTCGTACCAAAGGAAACGTGTTGAAGGAGTTGATGATGAAAGGTTGAAGTTTGAACTTTGTACTATGTTATCTAGGGAGGTTTTATATCCTGTGGTGAGAAAATATGCATCTACTCCTGCTGCACCTCGTCTGAAATTGGTTTCTACATCTGAGTTGAAGGCCCTGTTATCCATTGAGGATATCAAACTTCCTTCATGGATAGATGGAATGTGCATGGCTGAATATCTTCCTCACCTAGAAGAGAGTCTTGAGAAACAGGTTCTGGAGGCAGTTTCATTGATTGATGTTAGGAGAGGCTTTATAGAGGCGTTGGACTCCTTCTTTGGAAGGCCTTTAGAAGCTGACCCGGTGTTCTGTCGAACGGCTACAGTTATCACTGCCTCTGGGGTGTTCACATTCCTGGCGCACTTCCTCATTTCAAGCCAATTTCCGAAGAAGCAGCCTTCTCTGGTGCTGCAAAGTTCTCAGCATTTCAACTCCCATGGTGCGCCCATCAAGTCGCAGCTTATTACCGACTATCCTTGGAGTCCTAGGTGGGAGCCATTGCAAATGGCTGAGCGGATTTTCGAGTTTCTGGCTGATGAGGCTTTGAGCTTCAAGAGATTTCTAATGGCAGCAACTAAAGGTCTTGTGTTTGCTATGCTTCTTATTTCTTTTGCTTTTGTGCTCCTTATGGAATCAGCCCAAATGGTTATCACAACTCAGGTTGATAGTCCTCTTCCTGACGAGATAGATTGTGGGGAAGTTTGTGATGCGAGATGCCAATTATCATCGCGGCAAAAGATCTGCAAGAGGGCATGTGGAACATGCTGCGCTCGCTGTCAATGCGTTCCACCAGGCACTTCAGGCAACTATGATGTTTGTCCCTGCTATGCTAATATGACTACACATGGTGGCAGGCATAAGTGTCCCTAGGCAATGTTCTATAATGATGATGTTACGTCTCAGATCACACATATCCAAAATAAAGAATAATTGAGATAATAACTTCGATTCTAGAAGTATATCAACAAGAATGAATAATGTAGATTTCACTATTTATAGAGGGTTGATGTTCTGAAATGTTCAAAAACTATGCAAAGGTGATGCAAGGGAC

Coding sequence (CDS)

ATGTCCTCCGACACTGTACCACCTCTCATTGCTGCTCATATCAATTACCTGCTCAGCCACTTTCCTCTCCCCGTCAAGATTGAGAACATGTGGTCTGGCAGTAGACACTGCCCTGGAATTATTGATAGGTTCACGCTGATCGTACCTTACTGCCTTGAATTCGTCAGATGGGACATCATGTACAATGCTGAAACACCATTTTCTGCTCCTGATATTATGTTTGGAGCAGAAGATGAAAATTTCCATCCATTCTCAAGTAAGGTTGATGAAGGAGAACGAGATCATAATTCATTACAGAACTGTCTACGTGACTGGAACAGCAAAGATCCATCACGGCTCACTAGCCTCCTTCAAGAACTAAGGGATCGATATGTGTCGTACCAAAGGAAACGTGTTGAAGGAGTTGATGATGAAAGGTTGAAGTTTGAACTTTGTACTATGTTATCTAGGGAGGTTTTATATCCTGTGGTGAGAAAATATGCATCTACTCCTGCTGCACCTCGTCTGAAATTGGTTTCTACATCTGAGTTGAAGGCCCTGTTATCCATTGAGGATATCAAACTTCCTTCATGGATAGATGGAATGTGCATGGCTGAATATCTTCCTCACCTAGAAGAGAGTCTTGAGAAACAGGTTCTGGAGGCAGTTTCATTGATTGATGTTAGGAGAGGCTTTATAGAGGCGTTGGACTCCTTCTTTGGAAGGCCTTTAGAAGCTGACCCGGTGTTCTGTCGAACGGCTACAGTTATCACTGCCTCTGGGGTGTTCACATTCCTGGCGCACTTCCTCATTTCAAGCCAATTTCCGAAGAAGCAGCCTTCTCTGGTGCTGCAAAGTTCTCAGCATTTCAACTCCCATGGTGCGCCCATCAAGTCGCAGCTTATTACCGACTATCCTTGGAGTCCTAGGTGGGAGCCATTGCAAATGGCTGAGCGGATTTTCGAGTTTCTGGCTGATGAGGCTTTGAGCTTCAAGAGATTTCTAATGGCAGCAACTAAAGGTCTTGTGTTTGCTATGCTTCTTATTTCTTTTGCTTTTGTGCTCCTTATGGAATCAGCCCAAATGGTTATCACAACTCAGGTTGATAGTCCTCTTCCTGACGAGATAGATTGTGGGGAAGTTTGTGATGCGAGATGCCAATTATCATCGCGGCAAAAGATCTGCAAGAGGGCATGTGGAACATGCTGCGCTCGCTGTCAATGCGTTCCACCAGGCACTTCAGGCAACTATGATGTTTGTCCCTGCTATGCTAATATGACTACACATGGTGGCAGGCATAAGTGTCCCTAG

Protein sequence

MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIMYNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQELRDRYVSYQRKRVEGVDDERLKFELCTMLSREVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGMCMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGVFTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFEFLADEALSFKRFLMAATKGLVFAMLLISFAFVLLMESAQMVITTQVDSPLPDEIDCGEVCDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP

Homology

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BLAST of CmaCh09G001030 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.8e-25
Identity = 62/108 (57.41%), Postives = 74/108 (68.52%), Query Frame = 0


Query: 329 MAATKGLVFAMLLISFAFVLLMESAQMVITTQVDSPLPDE-------IDCGEVCDARCQL 388
           MA +K L FA LL+S   +LL+E  Q + T QV S    E       IDCG  C ARC+L
Sbjct: 1   MAISKAL-FASLLLS---LLLLEQVQSIQTDQVTSNAISEAAYSYKKIDCGGACAARCRL 60

Query: 389 SSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 430
           SSR ++C RACGTCCARC CVPPGTSGN + CPCYA++TTHG + KCP
Sbjct: 61  SSRPRLCNRACGTCCARCNCVPPGTSGNTETCPCYASLTTHGNKRKCP 104

[Close]

BLAST of CmaCh09G001030 vs. ExPASy Swiss-Prot
Match: P46689 (Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV=2)

HSP 1 Score: 110.2 bits (274), Expect = 6.1e-23
Identity = 56/101 (55.45%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 329 MAATKGLVFAMLLISFAFVLLMESAQMVITTQVDSPLPDEIDCGEVCDARCQLSSRQKIC 388
           MA +K L+ A LLIS   + L+++   V  +Q  +    +IDCG  C ARC+LS R ++C
Sbjct: 1   MAISKALI-ASLLISLLVLQLVQAD--VENSQKKNGYAKKIDCGSACVARCRLSRRPRLC 60

Query: 389 KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 430
            RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Sbjct: 61  HRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of CmaCh09G001030 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 1.8e-22
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 336 VFAMLLISFAF-VLLMESAQMVITTQVDSPLPDEIDCGEVCDARCQLSSRQKICKRACGT 395
           VF +LL S    +L+++     + T  D+P   +IDC   C  RC LSSR  +C RACGT
Sbjct: 3   VFRVLLASLLISLLVLDFVHADMVTSNDAP---KIDCNSRCQERCSLSSRPNLCHRACGT 62

Query: 396 CCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 430
           CCARC CV PGTSGNYD CPCY ++TTHGGR KCP
Sbjct: 63  CCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of CmaCh09G001030 vs. ExPASy Swiss-Prot
Match: Q568D5 (BRISC and BRCA1-A complex member 2 OS=Danio rerio OX=7955 GN=babam2 PE=2 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.7e-22
Identity = 98/323 (30.34%), Postives = 144/323 (44.58%), Query Frame = 0


Query: 42  DRFTLIVPYCLEFVRWDIMYNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNC 101
           DRF L +PY  E ++WDI++NA  P   PD +FG ED +F P  S++             
Sbjct: 57  DRFKLHIPYAGETLKWDIIFNARDPELPPDFIFG-EDADFLPEPSELPN----------- 116

Query: 102 LRDWNSKDPSRLTSLLQELRDRYVSYQRKRVEGVDDERLKFELCTML-----SREVLYPV 161
           L  W+S  P  L  L++E+  +Y  YQ +R+   D  RL FE  ++L      R +    
Sbjct: 117 LVSWDSGKPECLLLLVKEMLQQYHQYQCQRLR--DSSRLLFEYDSLLEDPNYGRNMEIYA 176

Query: 162 VRKYAST---PAAPRLKL----------------VSTSELKALLSI--ED---------- 221
            RK + T    A   LKL                +   E  ALLS+  ED          
Sbjct: 177 GRKNSWTGEFSARFLLKLPVDFSNIPIYLLKDTALDPGEDVALLSVSFEDAEATQVFPKL 236

Query: 222 ---------------IKLPSWIDGMCMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALD 281
                          + +P++  G C+ +Y+P + + L  +V   +     RR +I A  
Sbjct: 237 YLSPSIEHALGGSSALHIPAFPSGGCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAFL 296

Query: 282 SFFGR-PLEADPVFCRTATVITASGVFTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAP 313
           S FG   +E D V     T++     F FL H  +   FP+ QP+L  QS  HF S G  
Sbjct: 297 SHFGMGVVEYDAVGFTKLTLLLMWKDFCFLVHVDLPLYFPRDQPTLTFQSIYHFTSSG-Q 356

[Close]

BLAST of CmaCh09G001030 vs. ExPASy Swiss-Prot
Match: Q6DJ78 (BRISC and BRCA1-A complex member 2 OS=Xenopus tropicalis OX=8364 GN=babam2 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.1e-21
Identity = 92/324 (28.40%), Postives = 137/324 (42.28%), Query Frame = 0


Query: 42  DRFTLIVPYCLEFVRWDIMYNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNC 101
           DRF L +PY  E ++WDI++NA  P   PD +FG ED  F P          D ++L N 
Sbjct: 54  DRFKLHIPYAGETLKWDIIFNATYPELPPDFIFG-EDAEFLP----------DPSALHN- 113

Query: 102 LRDWNSKDPSRLTSLLQELRDRYVSYQRKRVEGVDDERLKFELCTMLSREVLYPVVRKYA 161
           L +WN  DP  L  +++EL  +Y  YQ  R+   +  RL FE  T+         +  YA
Sbjct: 114 LAEWNPSDPECLLLVVKELVQQYHQYQCSRLS--ESSRLMFEYQTLQEEPQYGENMEIYA 173

Query: 162 ----------------------------------------------------STPAAPRL 221
                                                               +T   P+L
Sbjct: 174 GKKNNWTGEFSARFLLKLPVDFSNIPIYLLKDSNEDPGEDVALLSVSFEDAEATQVFPKL 233

Query: 222 KLVSTSELKALLSIEDIKLPSWIDGMCMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEAL 281
            L    E  AL     + +P++  G C+ +Y+P + + L  +V   +     RR +I A 
Sbjct: 234 FLSPRIE-HALGGSSALHIPAFPSGSCLIDYVPQVCQLLTNKVQYVIQGYHKRREYIAAF 293

Query: 282 DSFFGR-PLEADPVFCRTATVITASGVFTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGA 313
            S FG   +E D       T++ +   F FL H  +   FP+ QP+L  QS  HF + G 
Sbjct: 294 LSHFGTGVVEYDAEGFTKLTLLLSWKDFCFLVHIDLPLYFPRDQPTLTFQSVYHFTNSG- 353

[Close]

BLAST of CmaCh09G001030 vs. ExPASy TrEMBL
Match: A0A6J1IL78 (BRCA1-A complex subunit BRE OS=Cucurbita maxima OX=3661 GN=LOC111475444 PE=4 SV=1)

HSP 1 Score: 643.7 bits (1659), Expect = 5.6e-181
Identity = 326/372 (87.63%), Postives = 327/372 (87.90%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM
Sbjct: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120
           YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120

Query: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSRE----------------------------- 180
           RDRYVSYQRKRVEGVDDERLKFELCTMLSRE                             
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGFEKPEEVKFAVPLVDIDINK 180

Query: 181 ----------------VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240
                           VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCLWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300
           CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300

Query: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 328
           FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE
Sbjct: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

[Close]

BLAST of CmaCh09G001030 vs. ExPASy TrEMBL
Match: A0A6J1F9E9 (BRCA1-A complex subunit BRE OS=Cucurbita moschata OX=3662 GN=LOC111443505 PE=4 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 8.1e-180
Identity = 323/372 (86.83%), Postives = 325/372 (87.37%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           MSSD VPPLIAAH+NYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM
Sbjct: 1   MSSDAVPPLIAAHVNYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120
           YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120

Query: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSRE----------------------------- 180
           RDRYVSYQRKRVEGVDDERLKFELCTMLSRE                             
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGFEKPEEVKFAVPLVDIDINK 180

Query: 181 ----------------VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240
                           VLYPVVRKYASTP APRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYASTPVAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300
           CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300

Query: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 328
           FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE
Sbjct: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

[Close]

BLAST of CmaCh09G001030 vs. ExPASy TrEMBL
Match: A0A5D3E738 (BRCA1-A complex subunit BRE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G008020 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 9.0e-171
Identity = 307/372 (82.53%), Postives = 320/372 (86.02%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           MS+DTVPPLIAAHINYLL+HFPLPVKIE+MWSGSRH PGI+DRFTL++PYCLEFV+WDIM
Sbjct: 1   MSADTVPPLIAAHINYLLNHFPLPVKIEHMWSGSRHYPGIMDRFTLVMPYCLEFVKWDIM 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120
           YNAE+PFSAPDIMFG EDENFHPFSSKVDEGE DHNSLQN LRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAESPFSAPDIMFGPEDENFHPFSSKVDEGEGDHNSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSRE----------------------------- 180
           RDRYVSYQRKRVEGVDDERLKFELCTMLSRE                             
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININK 180

Query: 181 ----------------VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240
                           VLYPVVRKYA+TP+APRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYATTPSAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300
           CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALD+FFGRPLEADPVFCRTATVITASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDNFFGRPLEADPVFCRTATVITASGV 300

Query: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 328
           FTFL H LIS+QFPKKQPSLVLQSSQHFNS GAPIKSQLITDYPWSPRWEPLQMAERIFE
Sbjct: 301 FTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

[Close]

BLAST of CmaCh09G001030 vs. ExPASy TrEMBL
Match: A0A1S3CSN0 (BRCA1-A complex subunit BRE OS=Cucumis melo OX=3656 GN=LOC103503876 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 9.0e-171
Identity = 307/372 (82.53%), Postives = 320/372 (86.02%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           MS+DTVPPLIAAHINYLL+HFPLPVKIE+MWSGSRH PGI+DRFTL++PYCLEFV+WDIM
Sbjct: 1   MSADTVPPLIAAHINYLLNHFPLPVKIEHMWSGSRHYPGIMDRFTLVMPYCLEFVKWDIM 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120
           YNAE+PFSAPDIMFG EDENFHPFSSKVDEGE DHNSLQN LRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAESPFSAPDIMFGPEDENFHPFSSKVDEGEGDHNSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSRE----------------------------- 180
           RDRYVSYQRKRVEGVDDERLKFELCTMLSRE                             
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININK 180

Query: 181 ----------------VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240
                           VLYPVVRKYA+TP+APRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYATTPSAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300
           CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALD+FFGRPLEADPVFCRTATVITASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDNFFGRPLEADPVFCRTATVITASGV 300

Query: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 328
           FTFL H LIS+QFPKKQPSLVLQSSQHFNS GAPIKSQLITDYPWSPRWEPLQMAERIFE
Sbjct: 301 FTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

[Close]

BLAST of CmaCh09G001030 vs. ExPASy TrEMBL
Match: A0A5A7VCG0 (BRCA1-A complex subunit BRE OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001120 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 2.6e-170
Identity = 307/372 (82.53%), Postives = 319/372 (85.75%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           MS+DTVPPLIAAHINYLL+HFPLPVKIE+MWSGSRH PGI DRFTL++PYCLEFV+WDIM
Sbjct: 1   MSADTVPPLIAAHINYLLNHFPLPVKIEHMWSGSRHYPGIKDRFTLVMPYCLEFVKWDIM 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120
           YNAE+PFSAPDIMFG EDENFHPFSSKVDEGE DHNSLQN LRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAESPFSAPDIMFGPEDENFHPFSSKVDEGEGDHNSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSRE----------------------------- 180
           RDRYVSYQRKRVEGVDDERLKFELCTMLSRE                             
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININK 180

Query: 181 ----------------VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240
                           VLYPVVRKYA+TP+APRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYATTPSAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300
           CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALD+FFGRPLEADPVFCRTATVITASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDNFFGRPLEADPVFCRTATVITASGV 300

Query: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 328
           FTFL H LIS+QFPKKQPSLVLQSSQHFNS GAPIKSQLITDYPWSPRWEPLQMAERIFE
Sbjct: 301 FTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

[Close]

BLAST of CmaCh09G001030 vs. NCBI nr
Match: XP_022975654.1 (BRISC and BRCA1-A complex member 2-like [Cucurbita maxima])

HSP 1 Score: 643.7 bits (1659), Expect = 1.2e-180
Identity = 326/372 (87.63%), Postives = 327/372 (87.90%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM
Sbjct: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120
           YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120

Query: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSRE----------------------------- 180
           RDRYVSYQRKRVEGVDDERLKFELCTMLSRE                             
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGFEKPEEVKFAVPLVDIDINK 180

Query: 181 ----------------VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240
                           VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCLWRHPQKIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300
           CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300

Query: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 328
           FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE
Sbjct: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

[Close]

BLAST of CmaCh09G001030 vs. NCBI nr
Match: XP_023535339.1 (BRISC and BRCA1-A complex member 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 642.5 bits (1656), Expect = 2.6e-180
Identity = 325/372 (87.37%), Postives = 327/372 (87.90%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM
Sbjct: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120
           YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120

Query: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSRE----------------------------- 180
           RDRYVSYQRKRVEGVDDERLKFELCTMLSRE                             
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGFEKPEEVKFAVPLVDIDINK 180

Query: 181 ----------------VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240
                           VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQNIFLQVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300
           CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300

Query: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 328
           FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQM+ERIFE
Sbjct: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMSERIFE 360

[Close]

BLAST of CmaCh09G001030 vs. NCBI nr
Match: XP_022937101.1 (BRISC and BRCA1-A complex member 2-like [Cucurbita moschata])

HSP 1 Score: 639.8 bits (1649), Expect = 1.7e-179
Identity = 323/372 (86.83%), Postives = 325/372 (87.37%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           MSSD VPPLIAAH+NYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM
Sbjct: 1   MSSDAVPPLIAAHVNYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120
           YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120

Query: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSRE----------------------------- 180
           RDRYVSYQRKRVEGVDDERLKFELCTMLSRE                             
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGFEKPEEVKFAVPLVDIDINK 180

Query: 181 ----------------VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240
                           VLYPVVRKYASTP APRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYASTPVAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300
           CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300

Query: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 328
           FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE
Sbjct: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

[Close]

BLAST of CmaCh09G001030 vs. NCBI nr
Match: KAG6591268.1 (BRISC and BRCA1-A complex member 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 636.7 bits (1641), Expect = 1.4e-178
Identity = 322/372 (86.56%), Postives = 325/372 (87.37%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           MSSDT+PPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM
Sbjct: 1   MSSDTLPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120
           YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLL EL
Sbjct: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLLEL 120

Query: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSRE----------------------------- 180
           RDRYVSYQRKRVEGVDDERLKFELCTMLSRE                             
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGFEKPEEVKFAVPLVDIDINK 180

Query: 181 ----------------VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240
                           VLYPVVRKYASTP APRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYASTPVAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300
           CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300

Query: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 328
           FTFLAHFLISSQFPKKQPSLVL+SSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE
Sbjct: 301 FTFLAHFLISSQFPKKQPSLVLRSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

[Close]

BLAST of CmaCh09G001030 vs. NCBI nr
Match: XP_008466484.1 (PREDICTED: BRCA1-A complex subunit BRE [Cucumis melo] >TYK31486.1 BRCA1-A complex subunit BRE [Cucumis melo var. makuwa])

HSP 1 Score: 609.8 bits (1571), Expect = 1.9e-170
Identity = 307/372 (82.53%), Postives = 320/372 (86.02%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           MS+DTVPPLIAAHINYLL+HFPLPVKIE+MWSGSRH PGI+DRFTL++PYCLEFV+WDIM
Sbjct: 1   MSADTVPPLIAAHINYLLNHFPLPVKIEHMWSGSRHYPGIMDRFTLVMPYCLEFVKWDIM 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFSSKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQEL 120
           YNAE+PFSAPDIMFG EDENFHPFSSKVDEGE DHNSLQN LRDWNSKDPSRLTSLLQEL
Sbjct: 61  YNAESPFSAPDIMFGPEDENFHPFSSKVDEGEGDHNSLQNSLRDWNSKDPSRLTSLLQEL 120

Query: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSRE----------------------------- 180
           RDRYVSYQRKRVEGVDDERLKFELCTMLSRE                             
Sbjct: 121 RDRYVSYQRKRVEGVDDERLKFELCTMLSREGIEMHLSSGVEKPEEVKFAVPLVDININK 180

Query: 181 ----------------VLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240
                           VLYPVVRKYA+TP+APRLKLVSTSELKALLSIEDIKLPSWIDGM
Sbjct: 181 MIPGCPWRHPQKIFLQVLYPVVRKYATTPSAPRLKLVSTSELKALLSIEDIKLPSWIDGM 240

Query: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITASGV 300
           CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALD+FFGRPLEADPVFCRTATVITASGV
Sbjct: 241 CMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDNFFGRPLEADPVFCRTATVITASGV 300

Query: 301 FTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERIFE 328
           FTFL H LIS+QFPKKQPSLVLQSSQHFNS GAPIKSQLITDYPWSPRWEPLQMAERIFE
Sbjct: 301 FTFLVHILISTQFPKKQPSLVLQSSQHFNSQGAPIKSQLITDYPWSPRWEPLQMAERIFE 360

[Close]

BLAST of CmaCh09G001030 vs. TAIR 10
Match: AT5G42470.1 (CONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro:IPR010358); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 376.7 bits (966), Expect = 2.5e-104
Identity = 182/374 (48.66%), Postives = 253/374 (67.65%), Query Frame = 0


Query: 1   MSSDTVPPLIAAHINYLLSHFPLPVKIENMWSGSRHCPGIIDRFTLIVPYCLEFVRWDIM 60
           M+ +  PPLIA  ++YLL+H P  +KI N+WSG++  P I+DRFTL++PYCLE ++WD++
Sbjct: 1   MAFEEFPPLIADQLHYLLNHSPDSIKIANVWSGNKINPKILDRFTLVIPYCLETIKWDVI 60

Query: 61  YNAETPFSAPDIMFGAEDENFHPFS-SKVDEGERDHNSLQNCLRDWNSKDPSRLTSLLQE 120
           YN+E     PD +FG +DE+F P   S +   +   +SL+  L +W+ +D +RL  ++Q 
Sbjct: 61  YNSEYAMDPPDFVFGPDDEDFVPCKCSAIAPDDDQISSLEKALSEWDHEDSTRLLVIIQG 120

Query: 121 LRDRYVSYQRKRVEGVDDERLKFELCTMLSR----------------------------- 180
           LRD+YV+YQR+RV  VDD+R+KFE+ T+L+R                             
Sbjct: 121 LRDQYVAYQRRRVGQVDDDRVKFEISTVLTRKGIEMQMASGVDKPEEVKFAVPLVMDMNI 180

Query: 181 -----------------EVLYPVVRKYASTPAAPRLKLVSTSELKALLSIEDIKLPSWID 240
                            +V+YP++RKY + P+APRLKLVS  +LK+L S+ED+KL  W+D
Sbjct: 181 NKMVVGCPWKHQQKIYLQVVYPILRKYEAAPSAPRLKLVSYYDLKSLFSVEDVKLSPWMD 240

Query: 241 GMCMAEYLPHLEESLEKQVLEAVSLIDVRRGFIEALDSFFGRPLEADPVFCRTATVITAS 300
           GMC+AEYLPHLEE+LE+Q+ EAV+ ID+RR FIEAL    GRPLEADP FCR AT + AS
Sbjct: 241 GMCLAEYLPHLEETLERQIHEAVAAIDLRRSFIEALSLNLGRPLEADPTFCRKATFLNAS 300

Query: 301 GVFTFLAHFLISSQFPKKQPSLVLQSSQHFNSHGAPIKSQLITDYPWSPRWEPLQMAERI 328
           G FTF+ HF  S+QFPK+QP+L+LQS QH N    P+KS L+T+YPWSPRWE  +MAER+
Sbjct: 301 GQFTFMVHFFFSTQFPKQQPTLMLQSCQHLNQSSVPVKSNLLTEYPWSPRWEVGRMAERL 360

[Close]

BLAST of CmaCh09G001030 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-24
Identity = 56/101 (55.45%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 329 MAATKGLVFAMLLISFAFVLLMESAQMVITTQVDSPLPDEIDCGEVCDARCQLSSRQKIC 388
           MA +K L+ A LLIS   +L+++  Q    +Q  +    +IDCG  C ARC+LS R ++C
Sbjct: 1   MAISKALI-ASLLIS---LLVLQLVQADENSQKKNGYAKKIDCGSACVARCRLSRRPRLC 60

Query: 389 KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 430
            RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Sbjct: 61  HRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 97

[Close]

BLAST of CmaCh09G001030 vs. TAIR 10
Match: AT1G75750.1 (GAST1 protein homolog 1 )

HSP 1 Score: 110.2 bits (274), Expect = 4.3e-24
Identity = 56/101 (55.45%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 329 MAATKGLVFAMLLISFAFVLLMESAQMVITTQVDSPLPDEIDCGEVCDARCQLSSRQKIC 388
           MA +K L+ A LLIS   + L+++   V  +Q  +    +IDCG  C ARC+LS R ++C
Sbjct: 1   MAISKALI-ASLLISLLVLQLVQAD--VENSQKKNGYAKKIDCGSACVARCRLSRRPRLC 60

Query: 389 KRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 430
            RACGTCC RC CVPPGT GNYD C CYA++TTHGGR KCP
Sbjct: 61  HRACGTCCYRCNCVPPGTYGNYDKCQCYASLTTHGGRRKCP 98

[Close]

BLAST of CmaCh09G001030 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.3e-23
Identity = 53/95 (55.79%), Postives = 64/95 (67.37%), Query Frame = 0


Query: 336 VFAMLLISFAF-VLLMESAQMVITTQVDSPLPDEIDCGEVCDARCQLSSRQKICKRACGT 395
           VF +LL S    +L+++     + T  D+P   +IDC   C  RC LSSR  +C RACGT
Sbjct: 3   VFRVLLASLLISLLVLDFVHADMVTSNDAP---KIDCNSRCQERCSLSSRPNLCHRACGT 62

Query: 396 CCARCQCVPPGTSGNYDVCPCYANMTTHGGRHKCP 430
           CCARC CV PGTSGNYD CPCY ++TTHGGR KCP
Sbjct: 63  CCARCNCVAPGTSGNYDKCPCYGSLTTHGGRRKCP 94

[Close]

BLAST of CmaCh09G001030 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 100.1 bits (248), Expect = 4.5e-21
Identity = 42/62 (67.74%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 368 EIDCGEVCDARCQLSSRQKICKRACGTCCARCQCVPPGTSGNYDVCPCYANMTTHGGRHK 427
           +IDCG  C  RC  SSR K+C RAC +CC+RC CVPPGTSGN  +CPCYA++TTHGGR K
Sbjct: 38  KIDCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLK 97

Query: 428 CP 430
           CP
Sbjct: 98  CP 99

The following BLAST results are available for this feature:

BLAST of CmaCh09G001030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93X17	3.8e-25	57.41	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46689	6.1e-23	55.45	Gibberellin-regulated protein 1 OS=Arabidopsis thaliana OX=3702 GN=GASA1 PE=2 SV...	[more]
F4IQJ4	1.8e-22	55.79	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
Q568D5	6.7e-22	30.34	BRISC and BRCA1-A complex member 2 OS=Danio rerio OX=7955 GN=babam2 PE=2 SV=1	[more]
Q6DJ78	1.1e-21	28.40	BRISC and BRCA1-A complex member 2 OS=Xenopus tropicalis OX=8364 GN=babam2 PE=2 ...	[more]

BLAST of CmaCh09G001030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IL78	5.6e-181	87.63	BRCA1-A complex subunit BRE OS=Cucurbita maxima OX=3661 GN=LOC111475444 PE=4 SV=...	[more]
A0A6J1F9E9	8.1e-180	86.83	BRCA1-A complex subunit BRE OS=Cucurbita moschata OX=3662 GN=LOC111443505 PE=4 S...	[more]
A0A5D3E738	9.0e-171	82.53	BRCA1-A complex subunit BRE OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3CSN0	9.0e-171	82.53	BRCA1-A complex subunit BRE OS=Cucumis melo OX=3656 GN=LOC103503876 PE=4 SV=1	[more]
A0A5A7VCG0	2.6e-170	82.53	BRCA1-A complex subunit BRE OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of CmaCh09G001030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975654.1	1.2e-180	87.63	BRISC and BRCA1-A complex member 2-like [Cucurbita maxima]	[more]
XP_023535339.1	2.6e-180	87.37	BRISC and BRCA1-A complex member 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022937101.1	1.7e-179	86.83	BRISC and BRCA1-A complex member 2-like [Cucurbita moschata]	[more]
KAG6591268.1	1.4e-178	86.56	BRISC and BRCA1-A complex member 2, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_008466484.1	1.9e-170	82.53	PREDICTED: BRCA1-A complex subunit BRE [Cucumis melo] >TYK31486.1 BRCA1-A comple...	[more]

BLAST of CmaCh09G001030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42470.1	2.5e-104	48.66	CONTAINS InterPro DOMAIN/s: Brain/reproductive organ-expressed protein (InterPro...	[more]
AT1G75750.2	1.9e-24	55.45	GAST1 protein homolog 1	[more]
AT1G75750.1	4.3e-24	55.45	GAST1 protein homolog 1	[more]
AT2G18420.1	1.3e-23	55.79	Gibberellin-regulated family protein	[more]
AT4G09610.1	4.5e-21	67.74	GAST1 protein homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 370..429 e-value: 1.8E-21 score: 76.0
IPR010358	BRCA1-A complex subunit BRE	PFAM	PF06113	BRE	coord: 25..151 e-value: 6.9E-17 score: 61.3 coord: 167..283 e-value: 2.0E-11 score: 43.3
IPR010358	BRCA1-A complex subunit BRE	PANTHER	PTHR15189	BRISC AND BRCA1-A COMPLEX MEMBER 2	coord: 2..152 coord: 152..331

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G001030.1	CmaCh09G001030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006302	double-strand break repair
cellular_component	GO:0070531	BRCA1-A complex
cellular_component	GO:0070552	BRISC complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane