CmaCh09G000820 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh09G000820
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Plastocyanin
Location	Cma_Chr09: 361527 .. 362030 (+)
RNA-Seq Expression	CmaCh09G000820
Synteny	CmaCh09G000820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCGTCACCTCCGCCACCGTTGCCATCCCCTCCTTCACCGGCCTCAAGACCTCCGCCACCGCTTCCAAATCCACCGCCGCCGTCCGCGTCTCCTCCCCCTCGGTCCCCAAGCTGACCGTCAGGGCCTCTCTGAAGGACCTTGGTGTGGCCGTGGCCGCCACCGCCGCCAGTGCCCTGCTGGCCTCAAACGCCTTGGCCATTGAGGTCTTGCTAGGCGGCGACGACGGATCTCTAGCCTTCATTCCGAACGATTTCTCGGTGGCGGCCGGTGAGAAAATCGTGTTCAAGAACAACGCGGGTTTCCCACACAACGTGGTGTTCGACGAGGACGAAATCCCAAGCGGAGTGGACGCCGGCAAGATCTCGATGAACGAGGAAGATCTTCTTAACGCCCCCGGCGAGGTCTACGAAGTCAATCTCACCGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGCAAAGTCACCGTTAACTGA

mRNA sequence

ATGGCCACCGTCACCTCCGCCACCGTTGCCATCCCCTCCTTCACCGGCCTCAAGACCTCCGCCACCGCTTCCAAATCCACCGCCGCCGTCCGCGTCTCCTCCCCCTCGGTCCCCAAGCTGACCGTCAGGGCCTCTCTGAAGGACCTTGGTGTGGCCGTGGCCGCCACCGCCGCCAGTGCCCTGCTGGCCTCAAACGCCTTGGCCATTGAGGTCTTGCTAGGCGGCGACGACGGATCTCTAGCCTTCATTCCGAACGATTTCTCGGTGGCGGCCGGTGAGAAAATCGTGTTCAAGAACAACGCGGGTTTCCCACACAACGTGGTGTTCGACGAGGACGAAATCCCAAGCGGAGTGGACGCCGGCAAGATCTCGATGAACGAGGAAGATCTTCTTAACGCCCCCGGCGAGGTCTACGAAGTCAATCTCACCGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGCAAAGTCACCGTTAACTGA

Coding sequence (CDS)

ATGGCCACCGTCACCTCCGCCACCGTTGCCATCCCCTCCTTCACCGGCCTCAAGACCTCCGCCACCGCTTCCAAATCCACCGCCGCCGTCCGCGTCTCCTCCCCCTCGGTCCCCAAGCTGACCGTCAGGGCCTCTCTGAAGGACCTTGGTGTGGCCGTGGCCGCCACCGCCGCCAGTGCCCTGCTGGCCTCAAACGCCTTGGCCATTGAGGTCTTGCTAGGCGGCGACGACGGATCTCTAGCCTTCATTCCGAACGATTTCTCGGTGGCGGCCGGTGAGAAAATCGTGTTCAAGAACAACGCGGGTTTCCCACACAACGTGGTGTTCGACGAGGACGAAATCCCAAGCGGAGTGGACGCCGGCAAGATCTCGATGAACGAGGAAGATCTTCTTAACGCCCCCGGCGAGGTCTACGAAGTCAATCTCACCGAGAAAGGAAGCTACTCCTTCTACTGTTCGCCCCATCAAGGAGCTGGAATGGTCGGCAAAGTCACCGTTAACTGA

Protein sequence

MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN

Homology

[Close]

BLAST of CmaCh09G000820 vs. ExPASy Swiss-Prot
Match: P17340 (Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 3.4e-62
Identity = 127/170 (74.71%), Postives = 148/170 (87.06%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATAS---KSTAAVRVSSPSVPKLTVRASLKDLGVAVAATA 60
           MATVTSA VAIPSFTGLK  A++S    + A+ +V++  V +LTV+ASLKD+G  VAATA
Sbjct: 1   MATVTSAAVAIPSFTGLKAGASSSSRVSTGASAKVAAAPVARLTVKASLKDVGAVVAATA 60

Query: 61  ASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSG 120
            SA+LASNA+A+EVLLGGDDGSLAFIP +FSV+AGEKI FKNNAGFPHNVVFDEDEIP+G
Sbjct: 61  VSAMLASNAMALEVLLGGDDGSLAFIPGNFSVSAGEKITFKNNAGFPHNVVFDEDEIPAG 120

Query: 121 VDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           VDA KISM+EEDLLNA GE Y V L+EKG+Y+FYC+PHQGAGMVGKVTVN
Sbjct: 121 VDASKISMSEEDLLNAAGETYSVTLSEKGTYTFYCAPHQGAGMVGKVTVN 170

[Close]

BLAST of CmaCh09G000820 vs. ExPASy Swiss-Prot
Match: P00289 (Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 5.7e-62
Identity = 125/168 (74.40%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 1   MATV-TSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAAS 60
           MATV +SA VA+PSFTGLK S +   +TA +  ++ +VP+L+V+ASLK++G AV ATAA+
Sbjct: 1   MATVASSAAVAVPSFTGLKASGSIKPTTAKIIPTTTAVPRLSVKASLKNVGAAVVATAAA 60

Query: 61  ALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
            LLA NA+A+EVLLGG DGSLAF+P DFSVA+GE+IVFKNNAGFPHNVVFDEDEIPSGVD
Sbjct: 61  GLLAGNAMAVEVLLGGGDGSLAFLPGDFSVASGEEIVFKNNAGFPHNVVFDEDEIPSGVD 120

Query: 121 AGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           A KISM+EEDLLNAPGE Y+V LTEKG+Y FYCSPHQGAGMVGKVTVN
Sbjct: 121 AAKISMSEEDLLNAPGETYKVTLTEKGTYKFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of CmaCh09G000820 vs. ExPASy Swiss-Prot
Match: P42699 (Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT112 PE=1 SV=2)

HSP 1 Score: 236.9 bits (603), Expect = 1.7e-61
Identity = 124/167 (74.25%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA+VTSATVAIPSFTGLK S   S +T  ++ ++ + PKLTV++SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
            LA NA+AIEVLLGG DGSLAFIPNDFS+A GEKIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM+E+DLLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. ExPASy Swiss-Prot
Match: P00299 (Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 236.5 bits (602), Expect = 2.2e-61
Identity = 122/168 (72.62%), Postives = 149/168 (88.69%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKT-SATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAAS 60
           MATVTSA V+IPSFTGLK  SA+ +K +A+ +VS+  +P+L+++AS+KD+G AV ATAAS
Sbjct: 1   MATVTSAAVSIPSFTGLKAGSASNAKVSASAKVSASPLPRLSIKASMKDVGAAVVATAAS 60

Query: 61  ALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNA+AI+VLLG DDGSLAF+P++FS++ GEKIVFKNNAGFPHN+VFDED IPSGVD
Sbjct: 61  AMIASNAMAIDVLLGADDGSLAFVPSEFSISPGEKIVFKNNAGFPHNIVFDEDSIPSGVD 120

Query: 121 AGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           A KISM+EEDLLNA GE +EV L+ KG YSFYCSPHQGAGMVGKVTVN
Sbjct: 121 ASKISMSEEDLLNAKGETFEVALSNKGEYSFYCSPHQGAGMVGKVTVN 168

[Close]

BLAST of CmaCh09G000820 vs. ExPASy Swiss-Prot
Match: P11970 (Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2)

HSP 1 Score: 229.2 bits (583), Expect = 3.5e-59
Identity = 118/168 (70.24%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLK-TSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAAS 60
           MA VTSA V+IPSFTGLK  SA+ +K +A+ +VS+  +P+L+++ASLK++G AV ATAAS
Sbjct: 1   MAAVTSAAVSIPSFTGLKAASASNAKVSASAKVSASPLPRLSIKASLKEVGAAVVATAAS 60

Query: 61  ALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVD 120
           A++ASNA+A++VLLG DDGSLAF+P++FSV AGEKIVFKNNAGFPHNV+FDED +PSGVD
Sbjct: 61  AMIASNAMAVDVLLGADDGSLAFVPSEFSVPAGEKIVFKNNAGFPHNVLFDEDAVPSGVD 120

Query: 121 AGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
             KISM+EEDLLNA GE +EV L++KG Y+FYCSPHQGAGMVGKV VN
Sbjct: 121 VSKISMSEEDLLNAKGETFEVALSDKGEYTFYCSPHQGAGMVGKVIVN 168

[Close]

BLAST of CmaCh09G000820 vs. ExPASy TrEMBL
Match: A0A6J1IFB6 (Plastocyanin OS=Cucurbita maxima OX=3661 GN=LOC111476724 PE=3 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 9.8e-81
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. ExPASy TrEMBL
Match: A0A6J1FAV0 (Plastocyanin OS=Cucurbita moschata OX=3662 GN=LOC111443648 PE=3 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.5e-78
Identity = 161/167 (96.41%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSATVAIP+FTGLK+ ATASK TAAVRVSSP+VPKLTVRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. ExPASy TrEMBL
Match: A0A5A7VCJ5 (Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001440 PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.9e-69
Identity = 143/167 (85.63%), Postives = 160/167 (95.81%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK S+++SK T+A+R+ SP+ PKL+VRASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLK-SSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of CmaCh09G000820 vs. ExPASy TrEMBL
Match: A0A5D3E5P8 (Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007720 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.9e-68
Identity = 142/167 (85.03%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK S+++SK T+A+R+ SP+ PKL+VRASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLK-SSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GE IVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of CmaCh09G000820 vs. ExPASy TrEMBL
Match: A0A1S3CRA6 (Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.9e-68
Identity = 142/167 (85.03%), Postives = 159/167 (95.21%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA VTSA VAIPSFTGLK S+++SK T+A+R+ SP+ PKL+VRASLKD+GVAVAATAASA
Sbjct: 1   MAAVTSAAVAIPSFTGLK-SSSSSKPTSAIRLPSPASPKLSVRASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNA+AIE+LLGGDDGSLAF+PN+F+VA+GE IVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNAMAIEILLGGDDGSLAFVPNNFTVASGETIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISM+EE+LLNAPGEVYEV LTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMDEENLLNAPGEVYEVQLTEKGSYSFYCSPHQGAGMVGKVTVN 166

[Close]

BLAST of CmaCh09G000820 vs. NCBI nr
Match: XP_022976282.1 (plastocyanin [Cucurbita maxima])

HSP 1 Score: 309.3 bits (791), Expect = 2.0e-80
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. NCBI nr
Match: XP_023534891.1 (plastocyanin [Cucurbita pepo subsp. pepo])

HSP 1 Score: 305.4 bits (781), Expect = 2.9e-79
Identity = 164/167 (98.20%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSATVAIPSFTGLK+SATASKSTAAVRVSSP+VPKLTVRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKSSATASKSTAAVRVSSPAVPKLTVRASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. NCBI nr
Match: KAG6591248.1 (Plastocyanin major isoform, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 304.3 bits (778), Expect = 6.5e-79
Identity = 163/167 (97.60%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSATVAIPSFTGLK+SATASKST+AVRVSSP+VPKLTVRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKSSATASKSTSAVRVSSPAVPKLTVRASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. NCBI nr
Match: KAG7024131.1 (Plastocyanin major isoform, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 301.2 bits (770), Expect = 5.5e-78
Identity = 162/167 (97.01%), Postives = 166/167 (99.40%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSATVAIPSFTGLK+SATASKST+AVRVSSP+VPKLTVRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPSFTGLKSSATASKSTSAVRVSSPAVPKLTVRASLKDVGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISMNEEDLLNA GEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAAGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. NCBI nr
Match: XP_022937324.1 (plastocyanin [Cucurbita moschata])

HSP 1 Score: 300.8 bits (769), Expect = 7.2e-78
Identity = 161/167 (96.41%), Postives = 165/167 (98.80%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MATVTSATVAIP+FTGLK+ ATASK TAAVRVSSP+VPKLTVRASLKD+GVAVAATAASA
Sbjct: 1   MATVTSATVAIPTFTGLKSPATASKPTAAVRVSSPAVPKLTVRASLKDIGVAVAATAASA 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
           LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA
Sbjct: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
           GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN
Sbjct: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. TAIR 10
Match: AT1G20340.1 (Cupredoxin superfamily protein )

HSP 1 Score: 236.9 bits (603), Expect = 1.2e-62
Identity = 124/167 (74.25%), Postives = 141/167 (84.43%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGLKTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVAVAATAASA 60
           MA+VTSATVAIPSFTGLK S   S +T  ++ ++ + PKLTV++SLK+ GVA  A AAS 
Sbjct: 1   MASVTSATVAIPSFTGLKASTIKSSATVRIQTAAVASPKLTVKSSLKNFGVAAVAAAASI 60

Query: 61  LLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDEDEIPSGVDA 120
            LA NA+AIEVLLGG DGSLAFIPNDFS+A GEKIVFKNNAG+PHNVVFDEDEIPSGVD 
Sbjct: 61  ALAGNAMAIEVLLGGGDGSLAFIPNDFSIAKGEKIVFKNNAGYPHNVVFDEDEIPSGVDV 120

Query: 121 GKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTVN 168
            KISM+E+DLLN  GE YEV LTE G+YSFYC+PHQGAGMVGKVTVN
Sbjct: 121 AKISMDEQDLLNGAGETYEVALTEPGTYSFYCAPHQGAGMVGKVTVN 167

[Close]

BLAST of CmaCh09G000820 vs. TAIR 10
Match: AT1G76100.1 (plastocyanin 1 )

HSP 1 Score: 218.4 bits (555), Expect = 4.4e-57
Identity = 120/174 (68.97%), Postives = 138/174 (79.31%), Query Frame = 0


Query: 1   MATVTSATVAIPSFTGL--------KTSATASKSTAAVRVSSPSVPKLTVRASLKDLGVA 60
           MA +TSATV IPSFTGL        KT +T S+ST+A R    + PKL +++SLKD GV 
Sbjct: 1   MAAITSATVTIPSFTGLKLAVSSKPKTLSTISRSTSATR----APPKLALKSSLKDFGVI 60

Query: 61  VAATAASALLASNALAIEVLLGGDDGSLAFIPNDFSVAAGEKIVFKNNAGFPHNVVFDED 120
             ATAAS +LA NA+A+EVLLG DDGSLAF+P++F+VA GEKIVFKNNAGFPHNVVFDED
Sbjct: 61  AVATAASIVLAGNAMAMEVLLGSDDGSLAFVPSEFTVAKGEKIVFKNNAGFPHNVVFDED 120

Query: 121 EIPSGVDAGKISMNEEDLLNAPGEVYEVNLTEKGSYSFYCSPHQGAGMVGKVTV 167
           EIPSGVDA KISM+E  LLN  GE YEV LTE GSY FYC+PHQGAGMVGK+TV
Sbjct: 121 EIPSGVDASKISMDETALLNGAGETYEVTLTEPGSYGFYCAPHQGAGMVGKLTV 170

The following BLAST results are available for this feature:

BLAST of CmaCh09G000820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P17340	3.4e-62	74.71	Plastocyanin, chloroplastic OS=Solanum lycopersicum OX=4081 GN=PETE PE=2 SV=1	[more]
P00289	5.7e-62	74.40	Plastocyanin, chloroplastic OS=Spinacia oleracea OX=3562 GN=PETE PE=1 SV=2	[more]
P42699	1.7e-61	74.25	Plastocyanin major isoform, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DRT...	[more]
P00299	2.2e-61	72.62	Plastocyanin A, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2	[more]
P11970	3.5e-59	70.24	Plastocyanin B, chloroplastic OS=Populus nigra OX=3691 GN=PETE PE=1 SV=2	[more]

BLAST of CmaCh09G000820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IFB6	9.8e-81	100.00	Plastocyanin OS=Cucurbita maxima OX=3661 GN=LOC111476724 PE=3 SV=1	[more]
A0A6J1FAV0	3.5e-78	96.41	Plastocyanin OS=Cucurbita moschata OX=3662 GN=LOC111443648 PE=3 SV=1	[more]
A0A5A7VCJ5	3.9e-69	85.63	Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold205G001440 ...	[more]
A0A5D3E5P8	1.9e-68	85.03	Plastocyanin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G007720 ...	[more]
A0A1S3CRA6	1.9e-68	85.03	Plastocyanin OS=Cucumis melo OX=3656 GN=LOC103503851 PE=3 SV=1	[more]

BLAST of CmaCh09G000820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976282.1	2.0e-80	100.00	plastocyanin [Cucurbita maxima]	[more]
XP_023534891.1	2.9e-79	98.20	plastocyanin [Cucurbita pepo subsp. pepo]	[more]
KAG6591248.1	6.5e-79	97.60	Plastocyanin major isoform, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]
KAG7024131.1	5.5e-78	97.01	Plastocyanin major isoform, chloroplastic, partial [Cucurbita argyrosperma subsp...	[more]
XP_022937324.1	7.2e-78	96.41	plastocyanin [Cucurbita moschata]	[more]

BLAST of CmaCh09G000820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G20340.1	1.2e-62	74.25	Cupredoxin superfamily protein	[more]
AT1G76100.1	4.4e-57	68.97	plastocyanin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002387	Plastocyanin	PRINTS	PR00157	PLASTOCYANIN	coord: 97..115 score: 83.95 coord: 146..165 score: 80.37 coord: 74..93 score: 62.32
IPR002387	Plastocyanin	TIGRFAM	TIGR02656	TIGR02656	coord: 69..167 e-value: 2.3E-42 score: 141.4
IPR002387	Plastocyanin	CDD	cd04219	Plastocyanin	coord: 69..167 e-value: 1.65123E-49 score: 152.909
IPR001235	Blue (type 1) copper protein, plastocyanin-type	PRINTS	PR00156	COPPERBLUE	coord: 88..101 score: 42.86 coord: 144..158 score: 51.99 coord: 103..118 score: 55.62
IPR000923	Blue (type 1) copper domain	PFAM	PF00127	Copper-bind	coord: 70..167 e-value: 2.0E-34 score: 118.0
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 69..167 e-value: 5.1E-29 score: 102.9
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 67..167
None	No IPR available	PANTHER	PTHR34192:SF11	PLASTOCYANIN	coord: 1..167
None	No IPR available	PANTHER	PTHR34192	PLASTOCYANIN MAJOR ISOFORM, CHLOROPLASTIC-RELATED	coord: 1..167
IPR028871	Blue (type 1) copper protein, binding site	PROSITE	PS00196	COPPER_BLUE	coord: 146..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh09G000820.1	CmaCh09G000820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0009055	electron transfer activity