CmaCh09G000350 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh09G000350
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionLocalized to the inner membrane of the chloroplast
LocationCma_Chr09: 160627 .. 163298 (+)
RNA-Seq ExpressionCmaCh09G000350
SyntenyCmaCh09G000350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTCTCGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGGTCATTTTTGGGACTCACCGATGGCTGCGATATCTAATTCCTTGGTTTCAACCAAAAACCCTCAACTCCCGTTATCATCTGGTAATTCTTCTTACTCTCTAATTTCTTCAGCATTTGATCTTATCTCAGATTTTTGCTGTTGAATACTATTGGTTTTTCTTGTAATTTGTCTCTTGAATTACACCGAGCTTCAAATGGTGGCTACCTGCTACCCTTCACAATCTGCTTACCTCATAAATCGGCAGTGTTATATGTAGAAACCGCCTTGTTCCATGGGAAATTTGTGCGGGAACCGTGTATTTTCCCTATTGTTATGAAGCTTGCGGTGGGCTGTTTATCGTTTCTCGATTGCTGTCGAAAGGCTCGGTTATTCTATTCGTTTCTGTTACGTGAACATGATGTCCTGAGTTCCAAATCAATGAAAAATTTTCAATTCTTGGAAGATTGAATTTGACTAGTACATAGTTGCTCTCATTTTCATAATTTGGAAGAATTGGGGAGAGTATAAATGTATGGACACTTAAAATTTTTTTAGTCTAAATTTGCTCGCAAATTATTTTGGCAGGGTCAAATCTGAAAACTGCTGATAAACTTCTGGGGAGTGTGTCCCCCACCAGCTTGTTACTCAATCCTGGTTGGGTGGGAAAGGCGAAGCTTTCTACATCCAGGCGGCCACTTTCAGTTCAAGCTGCATATAGGTATAATCTACGGAATCGCTACTTAAACAACATGCCATTAAGTCATATTTTATGATAGAATTATAGTCTCCGAAGTCTCTTTACATGGTAGGAATGCATGTCTAGAATCCTTGTACGGGTAGGCTTATCATTGGGGTGTGCAAATTCTGGAAAAAGAATTTCCATACTAAACCAAATTGAAGGTGTTAATCTCAGGCAGTCAGTCAACAACCAAGAATCTTACCAGTTTCAAATGATTCAGTTCAACTGGTCAAACAGATTTCCAAACCGAAGGATGGTCCTTTTTGAGTGTCCATGTGCAAAACTGAATTTCATTAATTTAGTTTTGGATTAGTGAAAGAATGATTGAATCAACATATTGAATGCATGTACTCATTCTACTCTAGATATCAAATCAAATGGTCGTTGAATTTGATCTATAAACTCTGTATGATTCCGGCTTCGAGTTATGCCTCCCTATGAGAGTGTAGCATTTGTTCCTATTATATATGCCTCCCTATTGGGAAAATTTAGCTCAAACCTTCGTTCCTAGGTGAAAGAAGCCTCTTCTTTTCATGGATTCTTTTTGGAATAGTGTACATATAGCTTCATCGTGGTGTTCCAACCACACGATTTTTTTTACAATTACAGCCTTTTGATGATTTTTAATTATTGGAAGCCTCTAATGGTCCTTTACGTTGTTTCTCTCTTGTTTGGGAGGAGGATTTCCCTTCCTGAGCCCTTAGGTTGTTTCTCTCTCGTTTAGTCTATAAAACATCGTTTCTTATCCAAATCATAATAATAAATCTCTGTATGGTTGAAAATAATGTACAGTCCATAGCAATTGTTAGTATCTCTTATAGCATTTAGTATAAGTTGCAAATGGTCATGGCAGTTAAGATTATTGTGTACCTTATGACAGTGATAGCGGACGGTCAAGCAATGCAGGCATTTTTGTTGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGGTTTTTGACTTTTGCTCATCTCTTATCTAAGTTCTAAATTGTACATATGAGAAATTCATCTTGTATATCTGTTACTTGTGAGATATGATACTACATTATGTAACATACATATTATAGCAATCTACCAAGAAGTATGCACAACTGTTGTCTCTGAGCTTTCAGTTCGAAATCCTAGACTTTCAACTTTGCATGACTGAGAGTTGATCTTGTATTACAGATTAGCAAGGCACTTGCTGGAACAGATCGAAAAGAATTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGGTGCGAAATCACTCGTCTTCTTTTTTGTTGCAAGTTATCTCCTGAATGGACATTTCGTCTTCACTTGACACTGATTTAGCGAAGGCATTGATTTGATTTTATTTATTGGCAACATCATATACCCTTCTTAACCACCCTGAGTTGGAAGAGTGATAATTAAGGTCCGTGAAAAAGTAAGCCGAAAAAAAATGAGTTCAAGTTCAAATCATTGTAGCCACCTATATCGGATTTTAAATTCTACTAGTTTTTATTTACCATCAAATGTAGTAGGGTAAAGTGGTTGTCCTCTTATATGAGTCGAGGTACATGCAAGCCGGCGCGGACACACACATATATCACAAAAAATGAATTCGTATGTTTTCTTTCCAAGCCTCGTCAAGTTCTTGTCAATGATGTTAAAATATGCTTGTGTAGTTTTAGTTTTGAAAATTCTGCTGGGGGTATTTGCTCGTTGAACGTGTTTTTTTTTTTTTTAAATTGAAAAATTGCAGAAAACAAGAAAAGTGCTGGCACAGAAGATAGAACAGTTGAACTCTGCGATTGATGAGGTTTCTTCTCAGCTCCGGACAGACGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAATTGAACCTGCCATTTGA

mRNA sequence

CTCTCTCGCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGGTCATTTTTGGGACTCACCGATGGCTGCGATATCTAATTCCTTGGTTTCAACCAAAAACCCTCAACTCCCGTTATCATCTGGGTCAAATCTGAAAACTGCTGATAAACTTCTGGGGAGTGTGTCCCCCACCAGCTTGTTACTCAATCCTGGTTGGGTGGGAAAGGCGAAGCTTTCTACATCCAGGCGGCCACTTTCAGTTCAAGCTGCATATAGTGATAGCGGACGGTCAAGCAATGCAGGCATTTTTGTTGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAACAGATCGAAAAGAATTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATAGAACAGTTGAACTCTGCGATTGATGAGGTTTCTTCTCAGCTCCGGACAGACGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAATTGAACCTGCCATTTGA

Coding sequence (CDS)

ATGGCTGCGATATCTAATTCCTTGGTTTCAACCAAAAACCCTCAACTCCCGTTATCATCTGGGTCAAATCTGAAAACTGCTGATAAACTTCTGGGGAGTGTGTCCCCCACCAGCTTGTTACTCAATCCTGGTTGGGTGGGAAAGGCGAAGCTTTCTACATCCAGGCGGCCACTTTCAGTTCAAGCTGCATATAGTGATAGCGGACGGTCAAGCAATGCAGGCATTTTTGTTGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAACAGATCGAAAAGAATTGATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACAAGAAAAGTGCTGGCACAGAAGATAGAACAGTTGAACTCTGCGATTGATGAGGTTTCTTCTCAGCTCCGGACAGACGATCCCCCAAATGGAGTGGCCGTGAACTCTGACGAAATTGAACCTGCCATTTGA

Protein sequence

MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Homology
[Close]
BLAST of CmaCh09G000350 vs. ExPASy TrEMBL
Match: A0A6J1IGB6 (uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 7.4e-84
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120
           QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD
Sbjct: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]
BLAST of CmaCh09G000350 vs. ExPASy TrEMBL
Match: A0A6J1FC82 (uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC111442778 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQL LSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120
           QAAYSD GRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]
BLAST of CmaCh09G000350 vs. ExPASy TrEMBL
Match: A0A6J1FTW3 (uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC111446794 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.8e-75
Identity = 153/170 (90.00%), Postives = 161/170 (94.71%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           M+AISNSL+ TK PQL LS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSV
Sbjct: 1   MSAISNSLILTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120
           QAAYSD GRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISKALAGTDRK+LMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]
BLAST of CmaCh09G000350 vs. ExPASy TrEMBL
Match: A0A6J1IT36 (uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 4.8e-75
Identity = 153/170 (90.00%), Postives = 161/170 (94.71%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           M+AISNSLV TK PQL LS+GSNLKTADK  GSVSPT LLLNPGWVGKAKLST RRPLSV
Sbjct: 1   MSAISNSLVLTKTPQLQLSAGSNLKTADKRFGSVSPTRLLLNPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120
           QAAYSD GRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISKALAGTDRK+LMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSSAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGTDRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 171
           EEKA+EKTRKVLAQKIEQLNSAIDEVSSQLRT+D PNGVAVNSDE+EPAI
Sbjct: 121 EEKAVEKTRKVLAQKIEQLNSAIDEVSSQLRTEDSPNGVAVNSDEVEPAI 170

[Close]
BLAST of CmaCh09G000350 vs. ExPASy TrEMBL
Match: A0A1S3BV81 (uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.4e-73
Identity = 148/170 (87.06%), Postives = 159/170 (93.53%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           M AISNSLV TKNPQL L+ GSNLKT DK LGS+SPTSL+L+PGWVGKAKLST RRPLSV
Sbjct: 1   MTAISNSLVLTKNPQLQLTHGSNLKTVDKRLGSLSPTSLVLSPGWVGKAKLSTFRRPLSV 60

Query: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120
           QAAYSD GRSSNAGIF+GGFVLGG+IVGTLGCVYAPQISKA+AG DRK+LMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFIGGFVLGGIIVGTLGCVYAPQISKAIAGADRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVS+QLR +DPPNGVAVNSDE+E AI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRPEDPPNGVAVNSDEVESAI 170

[Close]
BLAST of CmaCh09G000350 vs. NCBI nr
Match: XP_022975295.1 (uncharacterized protein LOC111474436 [Cucurbita maxima])

HSP 1 Score: 319.7 bits (818), Expect = 1.5e-83
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120
           QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD
Sbjct: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]
BLAST of CmaCh09G000350 vs. NCBI nr
Match: XP_022936063.1 (uncharacterized protein LOC111442778 [Cucurbita moschata])

HSP 1 Score: 315.1 bits (806), Expect = 3.7e-82
Identity = 168/170 (98.82%), Postives = 168/170 (98.82%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQL LSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120
           QAAYSD GRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]
BLAST of CmaCh09G000350 vs. NCBI nr
Match: XP_023535792.1 (uncharacterized protein LOC111797119 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.0 bits (798), Expect = 3.2e-81
Identity = 167/170 (98.24%), Postives = 167/170 (98.24%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQL LSS SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSRSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120
           QAAYSD GRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 170

[Close]
BLAST of CmaCh09G000350 vs. NCBI nr
Match: KAG6591206.1 (hypothetical protein SDJN03_13552, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024090.1 hypothetical protein SDJN02_12903, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 306.6 bits (784), Expect = 1.3e-79
Identity = 167/176 (94.89%), Postives = 167/176 (94.89%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           MAAISNSLVSTKNPQL LSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV
Sbjct: 1   MAAISNSLVSTKNPQLQLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60

Query: 61  QAAY------SDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120
           QAAY       D GRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL
Sbjct: 61  QAAYRYNLRNRDGGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKL 120

Query: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 171
           PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI
Sbjct: 121 PKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 176

[Close]
BLAST of CmaCh09G000350 vs. NCBI nr
Match: XP_038900139.1 (uncharacterized protein LOC120087268 [Benincasa hispida])

HSP 1 Score: 292.0 bits (746), Expect = 3.4e-75
Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 0 

Query: 1   MAAISNSLVSTKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSV 60
           M AISNSLV TKNPQL LS GSNLKTA+K LGSVSPTSLLL PGWVGK KLST RRPLSV
Sbjct: 1   MTAISNSLVLTKNPQLQLSPGSNLKTANKHLGSVSPTSLLLGPGWVGKTKLSTFRRPLSV 60

Query: 61  QAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYD 120
           QAAYSD GRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISKALAG DRK+LMRKLPKFIYD
Sbjct: 61  QAAYSDGGRSSNAGIFIGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYD 120

Query: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIEPAI 171
           EEKALEKTRKVLAQKIEQLNSAIDEVS+QLRT+DPPNGVAVNSDE+EPAI
Sbjct: 121 EEKALEKTRKVLAQKIEQLNSAIDEVSAQLRTEDPPNGVAVNSDEVEPAI 170

[Close]
BLAST of CmaCh09G000350 vs. TAIR 10
Match: AT1G42960.1 (expressed protein localized to the inner membrane of the chloroplast. )

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-41
Identity = 97/169 (57.40%), Postives = 124/169 (73.37%), Query Frame = 0 

Query: 1   MAAISNSLVS--TKNPQLPLSSGSNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPL 60
           MA++S++ +S    + QL  SSG +L    + +      S  LN           ++R L
Sbjct: 1   MASLSSTSLSLPKNSHQLHPSSGFSLNPNARCVS----VSFGLNHSNKLHISAPRTKRIL 60

Query: 61  SVQAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFI 120
           ++Q+AY D   S + G+FVGGF+LGGLIVG LGCVYAPQISKA+AG DRK+LMRKLPKFI
Sbjct: 61  TIQSAYRDDDGSGSTGLFVGGFILGGLIVGALGCVYAPQISKAIAGADRKDLMRKLPKFI 120

Query: 121 YDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLRTDDPPNGVAVNSDEIE 168
           YDEEKALEKTRKVLA+KI QLNSAID+VSSQL+++D PNG A+++DEIE
Sbjct: 121 YDEEKALEKTRKVLAEKIAQLNSAIDDVSSQLKSEDTPNGAALSTDEIE 165

[Close]
BLAST of CmaCh09G000350 vs. TAIR 10
Match: AT5G16660.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 2.1e-14
Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 0 

Query: 22  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDSGRSSNAGIFVGGFV 81
           + L T  KL      + L ++       K S   R  SV A Y D  RS ++G F+ GF+
Sbjct: 24  NGLSTTTKLSSICKTSDLTIH-------KKSNRTRKFSVSAGYRDGSRSGSSGDFIAGFL 83

Query: 82  LGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNS 141
           LGG + G +  ++APQI +++   + +    K  +  Y +E  LEKTR+ L +KI QLNS
Sbjct: 84  LGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDE-GLEKTRETLNEKIGQLNS 143

Query: 142 AIDEVSSQLR 152
           AID VSS+LR
Sbjct: 144 AIDNVSSRLR 145

[Close]
BLAST of CmaCh09G000350 vs. TAIR 10
Match: AT5G16660.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02900.1); Has 106 Blast hits to 106 proteins in 32 species: Archae - 0; Bacteria - 28; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 49/130 (37.69%), Postives = 71/130 (54.62%), Query Frame = 0 

Query: 22  SNLKTADKLLGSVSPTSLLLNPGWVGKAKLSTSRRPLSVQAAYSDSGRSSNAGIFVGGFV 81
           + L T  KL      + L ++       K S   R  SV A   D  RS ++G F+ GF+
Sbjct: 24  NGLSTTTKLSSICKTSDLTIH-------KKSNRTRKFSVSA--GDGSRSGSSGDFIAGFL 83

Query: 82  LGGLIVGTLGCVYAPQISKALAGTDRKELMRKLPKFIYDEEKALEKTRKVLAQKIEQLNS 141
           LGG + G +  ++APQI +++   + +    K  +  Y +E  LEKTR+ L +KI QLNS
Sbjct: 84  LGGAVFGAVAYIFAPQIRRSVLNEEDEYGFEKPKQPTYYDE-GLEKTRETLNEKIGQLNS 143

Query: 142 AIDEVSSQLR 152
           AID VSS+LR
Sbjct: 144 AIDNVSSRLR 143

[Close]
BLAST of CmaCh09G000350 vs. TAIR 10
Match: AT3G02900.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1); Has 80 Blast hits to 80 proteins in 21 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 76; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11
Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 52  STSRRPLSVQAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELM 111
           S     LSV A Y    +   +  FV GF+LG  + GTL  ++APQI +++   +     
Sbjct: 38  SNRSHKLSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGFK 97

Query: 112 RKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR 152
           +      YDE   LE+ R++L +KI QLNSAID+VSS+L+
Sbjct: 98  KPEQPMYYDE--GLEERREILNEKIGQLNSAIDKVSSRLK 135

[Close]
BLAST of CmaCh09G000350 vs. TAIR 10
Match: AT3G02900.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16660.1). )

HSP 1 Score: 66.6 bits (161), Expect = 2.2e-11
Identity = 39/100 (39.00%), Postives = 57/100 (57.00%), Query Frame = 0 

Query: 52  STSRRPLSVQAAYSDSGRSSNAGIFVGGFVLGGLIVGTLGCVYAPQISKALAGTDRKELM 111
           S     LSV A Y    +   +  FV GF+LG  + GTL  ++APQI +++   +     
Sbjct: 37  SNRSHKLSVSAGYRGGSKGGGSSDFVTGFLLGSAVFGTLAYIFAPQIRRSVLSENEYGFK 96

Query: 112 RKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSSQLR 152
           +      YDE   LE+ R++L +KI QLNSAID+VSS+L+
Sbjct: 97  KPEQPMYYDE--GLEERREILNEKIGQLNSAIDKVSSRLK 134

The following BLAST results are available for this feature:
BLAST of CmaCh09G000350 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh09G000350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IGB67.4e-84100.00uncharacterized protein LOC111474436 OS=Cucurbita maxima OX=3661 GN=LOC111474436... [more]
A0A6J1FC821.8e-8298.82uncharacterized protein LOC111442778 OS=Cucurbita moschata OX=3662 GN=LOC1114427... [more]
A0A6J1FTW32.8e-7590.00uncharacterized protein LOC111446794 OS=Cucurbita moschata OX=3662 GN=LOC1114467... [more]
A0A6J1IT364.8e-7590.00uncharacterized protein LOC111480366 OS=Cucurbita maxima OX=3661 GN=LOC111480366... [more]
A0A1S3BV813.4e-7387.06uncharacterized protein LOC103493844 OS=Cucumis melo OX=3656 GN=LOC103493844 PE=... [more]
BLAST of CmaCh09G000350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022975295.11.5e-83100.00uncharacterized protein LOC111474436 [Cucurbita maxima][more]
XP_022936063.13.7e-8298.82uncharacterized protein LOC111442778 [Cucurbita moschata][more]
XP_023535792.13.2e-8198.24uncharacterized protein LOC111797119 [Cucurbita pepo subsp. pepo][more]
KAG6591206.11.3e-7994.89hypothetical protein SDJN03_13552, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038900139.13.4e-7590.59uncharacterized protein LOC120087268 [Benincasa hispida][more]
BLAST of CmaCh09G000350 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G42960.11.2e-4157.40expressed protein localized to the inner membrane of the chloroplast. [more]
AT5G16660.12.1e-1438.46unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G16660.23.3e-1237.69unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G02900.12.2e-1139.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G02900.22.2e-1139.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 122..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 145..170
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availablePANTHERPTHR34048LOW-DENSITY RECEPTOR-LIKE PROTEINcoord: 1..170
NoneNo IPR availablePANTHERPTHR34048:SF9SUBFAMILY NOT NAMEDcoord: 1..170

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G000350.1CmaCh09G000350.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane