CmaCh08G011920 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh08G011920
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionLow-density receptor-like protein
LocationCma_Chr08: 7330478 .. 7335682 (-)
RNA-Seq ExpressionCmaCh08G011920
SyntenyCmaCh08G011920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATCGAACCATGTCAACTGCATAGCGGGAATCTCTAAGCTCTGGTAGATCACAGTTTTTCTCGCTCTCTCTCTCTCTTTCTCTCTGTTTCTTTCTGCAAGACAAAGCCACCGGAAGCAATGGCGTCGTCGGCCGCTAGGATTACGTTTCGCGTTGTCATGGTGGTAGTCCTCCTCCTCGTCATTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGTCCATGACATTCGCCGGAACAAACAGACCGTTAAAGAAGGTGCGTTTAATTTGATGTTAAATTTGTATGTTTATGCTCGCCGGTGATTTGAAATGGAGTTTCAATTCTTTGTGTTGGACCTGCATTTCAGGTTTCTCTCAAATCGTTCTTGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCCATGATGGAGCTGATGGAAAGAAGGCTGGATCGGTTGCTGCTCGGAGGCTGCTTCATCAGGTTTCGTGAAAATCTCAGTTATTTGAATTGTGATTAGTCCTGAGAATTGAATGGTTTCATATGCATTAGTAAAGATAAATCAACGGATCTGGTTTTGTTTTTGTTTTTGTTTTTGTTTTTGTTTTGTCGTAATAAAGTGATATAATGACTGAAGTAGCAACTATTGAATTAATTTAGTTAAATGAAGGTAATGAAGGGTAAAGAAACCGTAATGCTTCAGCGTTCAGCCTTCAGTGTTGACACTATGCATTATTAGTCACTCGGATATTGTGTATAGTGATATTTGTACCTGAGACGTGGTGAACCACTACTTCGTAAAGACTTATTCTTACACAAACAAAAAAGAGGAAGAAGATATAACAAGTTTTTAATCTGGCCTTCCCTCTGAACAGATCCAGATATGTATCTTACATGAGCGACCTTGGCTGATATTGTGAACGAGTATTTATAATTTAAGACAAAAAATATGGTTGAGGTGGAAATGCGTACATAAGATGACAAGAACTGAAGATGGCAGTGGTAGCTTGTGATAGTTTTTGTTACTATGACTTGCTAGTTGGACATTTAGTGCTGATAGAGAAATTCCAAACAAACTCGACTAGTTGAAGTATAATGGAGTAGGCTTCAATAAGCAAATTTTAGAAAATGACATATCTTTGGAACTGTCTAGATAGAACAGAAGACTTTGTGGCACTGTAGTTGACCATAGAAAGAAACCCATTCTGCCCTACTGTCTTGTAATCACGCTTAATTGCTGCTACTCACAAGCTCAAGTGCAGCGAACATGACAAATCTCACTTGCAATAAGTTATTGCCCTCGTGCAAATAATTTATTTTTTCCTGTTATTTATTTTGTGGTAATTCCTTAGTATGAAATAAGTGGTTACCTCTGTCCCAAGTCTTTGAATGTAACTTGTATACCTTCCTCATCTCATCCTTGTAAACATGAGAAGGGAGAGAAGGAAGGATTGTTGCAGAATATTTGAGCATATTGATATGATAATCGTGTCTACAAACTTCTAAGTTTGATGTAACATAGTGTTTTCTAGGAAGTTTCACATTGAAATTCATTGTACTAAGTCTAGACACTTTTCCCCAATCAAGGTACAAGGAAACCTCTGATCCAAGACTTGACGCATTATATGATCCTTGTAGTTAATCAACCCTGTAGCTATGGTAAAGGGTGACTTGTAAATTTCAGAATTAGGATTTTGAATGAGTGAACTAGCTATAATATCTTGGCTTCTAGGGGAAATAGAAGCATTTTGACAATCCTTAGCTCTCTGGAGTCTGAATTGGTTGAGTTGAACAGCTCAAAATCTTTGCATTCTATTGTTCCCCTCCAAGATAACCTAATCTTACAAATCTTCATGCTAGCTGAAAAATATGGACTGCCACTAGAATATGATAAATTTCCAAATTCCACCTTGATATTAAACATAAGAATATCACACATATAATTGTCTCCGTCCCACTCTACATCGAAAAAACCAGAGGAGACTCTAAACTATTAGCAGTTCCTGCAGTTCATCTAAATATTAACCCAAAATAAGCTTAAATGGGATAACATACATCATGAATTGTCAACTACATAGTTCCTCGTTTTATGACAACTTGGAACGAATTATGTTGATCAGTATTGCTGGGGAAAACAAAATTAAACCAAATATAGAATAGCAAACTTGCTTGATGTTACAATCTGCTACTTCAAACATCACCTTCCTTTTCCAACCTTCTGAAAGCTTTTGCTTCTTCTGTCACAAAGTGGTGCATTCTCATCTCGAGGCTTCTCCCTTTCTTTACACTTTGCGTGTGAAAAATTGTTTATATTAATTTTCTTATTGTTCATGTATGGAAAATAGAGATAAATGTGGAGATTTCAGTGGCAGGACTTCCATTACCTCATCTTAGAAAACTTATTGCCAACTTCTGAATGTTTGTATGTATCTGAGTATACCATTATGTTTCGTTTAACTCATGTTTTTATGATTTCTATGTTAGATTAGGACAAGTGGTAGGGGGAAAAAGAACCATTTAAAAAAGTGTGCAAGAAATATTTCTTTGAAATCCTGGCTATGAGCTATTTATAGAAGTCCATTGACAATTCTTAAATTTCCACGTAAATCATTAAGTATTTCTGACACCGAGTTGCCTTATGACAATTCTTTACAAATATCCATGCGGAATAGCTGCACTCAGACACAACTGGTAGAGCTTTTTCTTACCTTTAAAACCAACATGAAAAGAAGAGTCCTCAAATATTTAAAATCACATGCCAAGACAAGTCTTGTTCACAATGTGGAATTCCATTGGAATCTTTAAATACAACCATTTTATAACATTGACATTACCCAGGAAAGTGGCATGGTTTAGAAAATACTTCCTCAGCAGTAAACATTCACACAGGTCTCATCAAATAGAAGAACAGTAATTTCGCAAGGACCTCCGAGAAAACAAAAAGAAAAATAACATTCCCGTCAACTCTAATAACAAGTACTCCAGAAGTATTCTCTAGCCTTTTGTGGATATCAGCAGACTTAGAATAGCAATTCTTTTGTAGGGATTGACCCACCAGCAGCCACAATTTGTTGCTCCATCTGCAATTAACAGATAAAACCTTTAGAAATTAAGAAGGATCTGCTAGCTTTTAAAACAGCAGTCTTATGTACTGACCCTGAATAGATTCTCAAACTTGTTTTTCACCAGGCAGGTCTCTTGCTTTAGTTGTTGCAGATATCTCAGGCACCTGCACCGAACCCAAAAATTCCCTTGTGTTTATAAGCTAATTTCATCCAATATTGCTCATATGTTGTAGGAGCTTTAATAGGAAAAACTTCTGATTTTGTTTAATAATAATACATAAATACCCTTTTTTGATAACTCGGGCCAAAGACGATAAAGAAAAGGTTCAATAATAGTGAAGTATTTCATGGTAAAAAAATTGAGACCTCAAAAAATTTGGGACTGAAAGGAAAAATAGATAAAATTCAAGCACAAAAAAATCGTACTTGAATCTAAGCATCATAACAACCCAGCTTTAGCCTTCAAAAGATAAGAGCTCACTCACCCTTCAATGTTCTGTTCCTCACAGAAGCTGCGGAGGGTAATACAGACATTTTTAACTCTCTGTGCACCTATGCTGTTAACCACAAAAGTCACAAAATCCTTCATTCAGTTTAGTTTTCGGTGCTCAAATTGATGAGTTTTTTTTTCTTTTCTAGAGAGAATACTATTTAATTCTCTTTTAGAGTTCGAAAATGGCAAGCTGCCAAATGAAAATTTTATTCACTCTATGCTTGATAAATTAGGGGGAAAAAAAAAACTGGCTGTTTGGAAGCTATTTACTCAAACTAGCCTTCTTTTTAGACAAAAAAATTAAGCATAAACATGATTATGTAACAGTTTCCCTCAAATATCATTAACTTTTATAAACAAACCCATAAAACTAGTTTTCGAATTAGGCTCCCAAAAGCTCATACATCATCAACACAAGGATATGAGGGAAAAAACGGGGTATTAGAAGTTTGGTGCCTACCTAGAACTGCTTCCTTTAAGCTGGTGAACATGGCCATCAACCTTTTGAAAATCCACATCAGGCTCTTCTCTGTAAAAAAAGGTTCAGAGAAAAAGGAAAACTCATATCAAAACAAAGATCAAAGAAACCCATAGATAGAAAAAGAAAAAGAAAAAAGCTTTGAGAAGCCTCCTCACAAAGCTCTGGTAAGATCATTGAGAAGCCTTTCAGAATCCTCAAAGAAAAGAGACACCACTTCAACAATGAAATCTGGGTTGCCCTCATCTTGCAGTTTCTGCAGCTCTATAAACTGACTGTCCAAGAAACCCTACTCTCTCCAAACACCAGAAACCAAACAATAAATAAATTAAGAAACTGAAACTACAAAGCAAGAAAACAAACCCCATTAAAGATTTGATCTTAGTTTTTGTTTTTTGTTCATACCTCCATGAATAGCGACTTTGTGTACTCAACCCATTGTCTCTGCATCAATCCCACCTCCATGCTTGCTTGCACTACACGCAAGAAACAAATAAAACTCCGTTATCAAAACTGCAACCCAAAATTGCAGATTTTTGAGGAAAGATTGCTTCAGACAAAGGGTTTTGAATGCCAGAAAAAACCTTTCAAAATTTTTGAGTAATAATGCAAAGCTTTTCCCTTTACTTTTAGGTATTATTATTGGTTGCACTTAAACTAGCAGACCAACCCAACTTTCCGTCTTCTCTGGATTTCTGTGCTGCTGCTGATTATTTGTGTCCCCAACCTCCCCAATTTCCTCTCTCTCTCTCTCGGCCTTTGCGCCATTTATTCATTTATGAGCCTCTCAACTCTGAAAGGAGTCCTTGAGCTCAACATTGTTTTCTCTGTTCTGGTTTATTATAATATTCCTTTTGACTGGTCTTTTTTTTTTTTTCTCTTGAGAAACTATTGGTTGTGGTTAATCGTTTTAGTTATAAGCTTGATGTTTATCTGAAAGAAGACTTGAAAGAAGACTTCATGGTTCTTTTCATCTATTGTCCTTGCACTATTACCATATTCTACTTTAGCCCTTGGTCCTTGTACTCCTAATTATTTCTTATTTCAAACCTTAACTTTGTGTGATGGATAGCAAATGATTTTGTATAATATTTTGAACAGTTTAGAACAGTAGAGATTAAGCGTCCCAGTCTAATAAAAGTTGAAGGACTAGAATTAGATTGA

mRNA sequence

GATCGAACCATGTCAACTGCATAGCGGGAATCTCTAAGCTCTGGTAGATCACAGTTTTTCTCGCTCTCTCTCTCTCTTTCTCTCTGTTTCTTTCTGCAAGACAAAGCCACCGGAAGCAATGGCGTCGTCGGCCGCTAGGATTACGTTTCGCGTTGTCATGGTGGTAGTCCTCCTCCTCGTCATTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGTCCATGACATTCGCCGGAACAAACAGACCGTTAAAGAAGGTTTCTCTCAAATCGTTCTTGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCCATGATGGAGCTGATGGAAAGAAGGCTGGATCGGTTGCTGCTCGGAGGCTGCTTCATCAGTTTAGAACAGTAGAGATTAAGCGTCCCAGTCTAATAAAAGTTGAAGGACTAGAATTAGATTGA

Coding sequence (CDS)

ATGGCGTCGTCGGCCGCTAGGATTACGTTTCGCGTTGTCATGGTGGTAGTCCTCCTCCTCGTCATTTTCTATGTCGGTCGTCCTCTGTACTGGAAGATTTCCGCCACTGTCCATGACATTCGCCGGAACAAACAGACCGTTAAAGAAGGTTTCTCTCAAATCGTTCTTGAAGCTCAGAAATCGGTGGGATGGTACCACGACGAGTCGGACTCGGGCGTCCATGATGGAGCTGATGGAAAGAAGGCTGGATCGGTTGCTGCTCGGAGGCTGCTTCATCAGTTTAGAACAGTAGAGATTAAGCGTCCCAGTCTAATAAAAGTTGAAGGACTAGAATTAGATTGA

Protein sequence

MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKSVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEIKRPSLIKVEGLELD
Homology
[Close]
BLAST of CmaCh08G011920 vs. ExPASy TrEMBL
Match: A0A6J1KLL4 (uncharacterized protein LOC111494388 isoform X4 OS=Cucurbita maxima OX=3661 GN=LOC111494388 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.2e-43
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60
          MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK
Sbjct: 1  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFR 96
          SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQF+
Sbjct: 61 SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFQ 95

[Close]
BLAST of CmaCh08G011920 vs. ExPASy TrEMBL
Match: A0A6J1KCK7 (uncharacterized protein LOC111494388 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111494388 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 9.3e-43
Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0 

Query: 1   MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60
           MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK
Sbjct: 1   MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60

Query: 61  SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEI-KRPSLI 106
           SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ +   + +RP LI
Sbjct: 61  SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQIQICILHERPWLI 106

[Close]
BLAST of CmaCh08G011920 vs. ExPASy TrEMBL
Match: A0A6J1KEW6 (uncharacterized protein LOC111494388 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494388 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.2e-42
Identity = 98/111 (88.29%), Postives = 99/111 (89.19%), Query Frame = 0 

Query: 1   MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60
           MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK
Sbjct: 1   MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60

Query: 61  SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEIKRPSLIKVEGLE 112
           SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ          LIK +G E
Sbjct: 61  SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQM--------GLIKNQGTE 103

[Close]
BLAST of CmaCh08G011920 vs. ExPASy TrEMBL
Match: A0A6J1KHD0 (uncharacterized protein LOC111494388 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494388 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 2.1e-42
Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0 

Query: 1   MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60
           MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK
Sbjct: 1   MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60

Query: 61  SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEI 100
           SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ   VEI
Sbjct: 61  SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQI-NVEI 98

[Close]
BLAST of CmaCh08G011920 vs. ExPASy TrEMBL
Match: A0A6J1KIX7 (uncharacterized protein LOC111494388 isoform X5 OS=Cucurbita maxima OX=3661 GN=LOC111494388 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 3.6e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0 

Query: 1  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60
          MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK
Sbjct: 1  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ 94
          SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ
Sbjct: 61 SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ 93

[Close]
BLAST of CmaCh08G011920 vs. NCBI nr
Match: XP_023000088.1 (uncharacterized protein LOC111494388 isoform X4 [Cucurbita maxima] >XP_023514364.1 uncharacterized protein LOC111778653 isoform X4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 183.7 bits (465), Expect = 8.7e-43
Identity = 94/95 (98.95%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60
          MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK
Sbjct: 1  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFR 96
          SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQF+
Sbjct: 61 SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFQ 95

[Close]
BLAST of CmaCh08G011920 vs. NCBI nr
Match: XP_023000087.1 (uncharacterized protein LOC111494388 isoform X3 [Cucurbita maxima])

HSP 1 Score: 182.6 bits (462), Expect = 1.9e-42
Identity = 97/106 (91.51%), Postives = 100/106 (94.34%), Query Frame = 0 

Query: 1   MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60
           MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK
Sbjct: 1   MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60

Query: 61  SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEI-KRPSLI 106
           SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ +   + +RP LI
Sbjct: 61  SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQIQICILHERPWLI 106

[Close]
BLAST of CmaCh08G011920 vs. NCBI nr
Match: XP_023000086.1 (uncharacterized protein LOC111494388 isoform X2 [Cucurbita maxima])

HSP 1 Score: 182.2 bits (461), Expect = 2.5e-42
Identity = 98/111 (88.29%), Postives = 99/111 (89.19%), Query Frame = 0 

Query: 1   MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60
           MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK
Sbjct: 1   MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60

Query: 61  SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVEIKRPSLIKVEGLE 112
           SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ          LIK +G E
Sbjct: 61  SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQM--------GLIKNQGTE 103

[Close]
BLAST of CmaCh08G011920 vs. NCBI nr
Match: XP_023514362.1 (uncharacterized protein LOC111778653 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.8 bits (460), Expect = 3.3e-42
Identity = 93/95 (97.89%), Postives = 94/95 (98.95%), Query Frame = 0 

Query: 1  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60
          MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK
Sbjct: 1  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFR 96
          SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ +
Sbjct: 61 SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQIK 95

[Close]
BLAST of CmaCh08G011920 vs. NCBI nr
Match: XP_023514360.1 (uncharacterized protein LOC111778653 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 181.4 bits (459), Expect = 4.3e-42
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 0 

Query: 1  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60
          MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK
Sbjct: 1  MASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQK 60

Query: 61 SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQFRTVE 99
          SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQ   ++
Sbjct: 61 SVGWYHDESDSGVHDGADGKKAGSVAARRLLHQMGLIK 98

[Close]
BLAST of CmaCh08G011920 vs. TAIR 10
Match: AT5G18850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 119.8 bits (299), Expect = 1.4e-27
Identity = 59/90 (65.56%), Postives = 73/90 (81.11%), Query Frame = 0 

Query: 2  ASSAARITFRVVMVVVLLLVIFYVGRPLYWKISATVHDIRRNKQTVKEGFSQIVLEAQKS 61
          +S   RI FR V+++ L++V+FYVGRPLYWKISAT+HDIR NKQ+V+EG SQIV EAQ+S
Sbjct: 6  SSPTTRIWFRTVILIALMVVLFYVGRPLYWKISATIHDIRHNKQSVREGISQIVHEAQRS 65

Query: 62 VGWYHDESDSGVHDGADGKKAGSVAARRLL 92
          VGWYHDESDSG  +G   KK+G   +RRLL
Sbjct: 66 VGWYHDESDSGFREG-HNKKSGIAVSRRLL 94

The following BLAST results are available for this feature:
BLAST of CmaCh08G011920 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh08G011920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KLL44.2e-4398.95uncharacterized protein LOC111494388 isoform X4 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1KCK79.3e-4391.51uncharacterized protein LOC111494388 isoform X3 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1KEW61.2e-4288.29uncharacterized protein LOC111494388 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1KHD02.1e-4296.97uncharacterized protein LOC111494388 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1KIX73.6e-42100.00uncharacterized protein LOC111494388 isoform X5 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of CmaCh08G011920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023000088.18.7e-4398.95uncharacterized protein LOC111494388 isoform X4 [Cucurbita maxima] >XP_023514364... [more]
XP_023000087.11.9e-4291.51uncharacterized protein LOC111494388 isoform X3 [Cucurbita maxima][more]
XP_023000086.12.5e-4288.29uncharacterized protein LOC111494388 isoform X2 [Cucurbita maxima][more]
XP_023514362.13.3e-4297.89uncharacterized protein LOC111778653 isoform X3 [Cucurbita pepo subsp. pepo][more]
XP_023514360.14.3e-4294.90uncharacterized protein LOC111778653 isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of CmaCh08G011920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G18850.11.4e-2765.56unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G011920.1CmaCh08G011920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane