CmaCh08G010680 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G010680
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	heterogeneous nuclear ribonucleoprotein 1-like
Location	Cma_Chr08: 6657577 .. 6659884 (+)
RNA-Seq Expression	CmaCh08G010680
Synteny	CmaCh08G010680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCACAATCAACCCAATCCTGACCGTTCATACTCAAACCCTACTACACTTCGAAGAGCACTCTTTTTTATTACCTCAGATCCACCAGAGTTCTCTCTTCCCCTTTTCTTCTCTCTCTTTTTCTCTTTCTCTTTTCAAGCCCCAGTCGGCTGCAAACCCTATTCTGAAATCCGTAACCCATAAACCAAATTCAATTTTTGCAGGAAGAACAGAGCCGTGAATCGATTTTTCCATTTGGGGTTTTTGAGAAACAGAGAGAAAAAGGGGCAATGGATTCGGATCAGGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACCTCTGAGGATAAGTTAAAGGACCACTTCAACAGCTATGGTGAAGTGATGCATACCGTTGTTATGAGGGATAAGATCACTAGCAAACCTAGAGGGTTTGGATTCGTTGTCTTTGCAGATCCCTCTGTTCTTGATCGAGTTCTCCAGGATAAGCACACTATAGATGGTAAAACGGTGCGTCGGAATCTTTTTTTTGTTTTCTTTATTCGATGTCGAGATTTTTGGTCTTTTTGGTTCGTGATAATAGCATTTGTGTTCCTTTGATTTGGCCTGGATACCTCATTTGAGTTCTAGGGGTTTTTGATTCCATAATGATATTAAATACTTTCCTTTTGGGTATCACATATCTGATGTTACTGGCTTTTTAGGGTTGCTCATATTGATGCATTTGCACCTCTCGTTACTGAGCTTTTTAGGGTTGTTTTTGGTGTAATTTGTTGGTTTGGTGCATTGCTTTTTTACGAGGAGAGGTATTGACAAAAGGGTCGGTTGTATTCTGCATTTTCGTTTCATCCTAGCTTATGTTTTCACTATGATTTACTGGAGAAATTCGTATTTCATATGATTGTGTATATTCTCTTGATAGTTAGTTCTTGGTAGGAATCTGTTGACTTCAACTGTGAAGTGTTGTCACGAGTTTTCTTTTGGTAACATTAGTGAAACCTAAACCGTTACCTGTCGGTAGATCTGTTTCGGTTTTGGGGCTAGTATGTAAACTGTTGCTATAACTTTCTCTCATTTGGTATCTTATCTTCTGGAAATATCTTACCTTCCTATCGTGTCGTTTTTTTGAAGAACTTTTTAGCATTTGTAATTTATATTCTTTTCTAGGTTGAGGCTAAGAGGGCCTTATCACGAGAGGAACAGCAGACCCCTGCGAGAGCGGGCAATTTGAACGCTACTAGAAATTCTGGTGGTGGAAATATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTGACTGAAGAGGGGTTTAAGGAGTATTTTGAGACTTATGGCGATGTAACTGATGTAGTAGTCATGTACGATCAAAATACTAGGCGTCCACGGGGATTTGGATTTATATCTTTTGATACTGAAGAAGCTGTTGACAGAGTTTTGCACAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAAGATGCCAATCCAGGTGCAGGTGGCCGCTCGATGGGTGGCAGTGCAAGCAGTGGTGGTTATCAAACTTATGGGTCATCTGGTGGTGTCAATTCAAATTCATATGATAGTCGTATGGATTCGAATAGGTACATGCAATCTCAGGGCTCTAGTGGAGGTTTCCCACCTTATGGTTCCTCTGGATATAACAATCCCGGGTATGGTTATGGTTCATCGAACAATGGTATGGGATACGGTGGTTATGGAAACTATAGTGGTTCAAATACTGGGTATGGTGCCCCTTCTGCTGTTGCTTATGGTAACCCAAATGTCGCCAATGCTGGTTATGCAAGCGGTCCTCAAGGTGGACCTAGAAGTTCGTGGTCCGCTCAAGCTCCCTCTGGATATGGAGCCATGGGCTATGGGAATGCAGCCCCGTGGGGAGGTGCCCCTGGGGGCAATGCTGGAGCTGGCAGTGGTGGGCCTGGATCTGCACCCACAGGTCATTCTCCTGGTGGAGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCGTATGGGAGTCAATCTGGTTACGGTACAGGTGGAGGACGTTCTGGTAGTGCCTCAAATAGCAATGTCGGGGGTGGTCCAAGTGGGGGAGAATTACAAGGGAACAGTGGTGGTTACATGAATAGTGGCTATGGCGATGCTAATGGAAACACTGGTTATGGAAATGCTGGTTGGAGATCCGATGGCGGACAAGTAGGTTATACCGGTGGTTATGGTGGTGGACAAGCTCGACAATCTCAACAACAGTAA

mRNA sequence

TCCACAATCAACCCAATCCTGACCGTTCATACTCAAACCCTACTACACTTCGAAGAGCACTCTTTTTTATTACCTCAGATCCACCAGAGTTCTCTCTTCCCCTTTTCTTCTCTCTCTTTTTCTCTTTCTCTTTTCAAGCCCCAGTCGGCTGCAAACCCTATTCTGAAATCCGTAACCCATAAACCAAATTCAATTTTTGCAGGAAGAACAGAGCCGTGAATCGATTTTTCCATTTGGGGTTTTTGAGAAACAGAGAGAAAAAGGGGCAATGGATTCGGATCAGGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACCTCTGAGGATAAGTTAAAGGACCACTTCAACAGCTATGGTGAAGTGATGCATACCGTTGTTATGAGGGATAAGATCACTAGCAAACCTAGAGGGTTTGGATTCGTTGTCTTTGCAGATCCCTCTGTTCTTGATCGAGTTCTCCAGGATAAGCACACTATAGATGGTAAAACGGTTGAGGCTAAGAGGGCCTTATCACGAGAGGAACAGCAGACCCCTGCGAGAGCGGGCAATTTGAACGCTACTAGAAATTCTGGTGGTGGAAATATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTGACTGAAGAGGGGTTTAAGGAGTATTTTGAGACTTATGGCGATGTAACTGATGTAGTAGTCATGTACGATCAAAATACTAGGCGTCCACGGGGATTTGGATTTATATCTTTTGATACTGAAGAAGCTGTTGACAGAGTTTTGCACAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAAGATGCCAATCCAGGTGCAGGTGGCCGCTCGATGGGTGGCAGTGCAAGCAGTGGTGGTTATCAAACTTATGGGTCATCTGGTGGTGTCAATTCAAATTCATATGATAGTCGTATGGATTCGAATAGGTACATGCAATCTCAGGGCTCTAGTGGAGGTTTCCCACCTTATGGTTCCTCTGGATATAACAATCCCGGGTATGGTTATGGTTCATCGAACAATGGTATGGGATACGGTGGTTATGGAAACTATAGTGGTTCAAATACTGGGTATGGTGCCCCTTCTGCTGTTGCTTATGGTAACCCAAATGTCGCCAATGCTGGTTATGCAAGCGGTCCTCAAGGTGGACCTAGAAGTTCGTGGTCCGCTCAAGCTCCCTCTGGATATGGAGCCATGGGCTATGGGAATGCAGCCCCGTGGGGAGGTGCCCCTGGGGGCAATGCTGGAGCTGGCAGTGGTGGGCCTGGATCTGCACCCACAGGTCATTCTCCTGGTGGAGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCGTATGGGAGTCAATCTGGTTACGGTACAGGTGGAGGACGTTCTGGTAGTGCCTCAAATAGCAATGTCGGGGGTGGTCCAAGTGGGGGAGAATTACAAGGGAACAGTGGTGGTTACATGAATAGTGGCTATGGCGATGCTAATGGAAACACTGGTTATGGAAATGCTGGTTGGAGATCCGATGGCGGACAAGTAGGTTATACCGGTGGTTATGGTGGTGGACAAGCTCGACAATCTCAACAACAGTAA

Coding sequence (CDS)

ATGGATTCGGATCAGGGGAAGCTTTTTATTGGTGGGATTTCATGGGAGACCTCTGAGGATAAGTTAAAGGACCACTTCAACAGCTATGGTGAAGTGATGCATACCGTTGTTATGAGGGATAAGATCACTAGCAAACCTAGAGGGTTTGGATTCGTTGTCTTTGCAGATCCCTCTGTTCTTGATCGAGTTCTCCAGGATAAGCACACTATAGATGGTAAAACGGTTGAGGCTAAGAGGGCCTTATCACGAGAGGAACAGCAGACCCCTGCGAGAGCGGGCAATTTGAACGCTACTAGAAATTCTGGTGGTGGAAATATGAGAACCAAAAAAATTTTTGTTGGGGGATTGCCTCCAACATTGACTGAAGAGGGGTTTAAGGAGTATTTTGAGACTTATGGCGATGTAACTGATGTAGTAGTCATGTACGATCAAAATACTAGGCGTCCACGGGGATTTGGATTTATATCTTTTGATACTGAAGAAGCTGTTGACAGAGTTTTGCACAAGACATTTCATGATTTGAATGGTAAACAAGTAGAAGTTAAGCGTGCCCTTCCCAAAGATGCCAATCCAGGTGCAGGTGGCCGCTCGATGGGTGGCAGTGCAAGCAGTGGTGGTTATCAAACTTATGGGTCATCTGGTGGTGTCAATTCAAATTCATATGATAGTCGTATGGATTCGAATAGGTACATGCAATCTCAGGGCTCTAGTGGAGGTTTCCCACCTTATGGTTCCTCTGGATATAACAATCCCGGGTATGGTTATGGTTCATCGAACAATGGTATGGGATACGGTGGTTATGGAAACTATAGTGGTTCAAATACTGGGTATGGTGCCCCTTCTGCTGTTGCTTATGGTAACCCAAATGTCGCCAATGCTGGTTATGCAAGCGGTCCTCAAGGTGGACCTAGAAGTTCGTGGTCCGCTCAAGCTCCCTCTGGATATGGAGCCATGGGCTATGGGAATGCAGCCCCGTGGGGAGGTGCCCCTGGGGGCAATGCTGGAGCTGGCAGTGGTGGGCCTGGATCTGCACCCACAGGTCATTCTCCTGGTGGAGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCGTATGGGAGTCAATCTGGTTACGGTACAGGTGGAGGACGTTCTGGTAGTGCCTCAAATAGCAATGTCGGGGGTGGTCCAAGTGGGGGAGAATTACAAGGGAACAGTGGTGGTTACATGAATAGTGGCTATGGCGATGCTAATGGAAACACTGGTTATGGAAATGCTGGTTGGAGATCCGATGGCGGACAAGTAGGTTATACCGGTGGTTATGGTGGTGGACAAGCTCGACAATCTCAACAACAGTAA

Protein sequence

MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNSGYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ

Homology

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BLAST of CmaCh08G010680 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.8e-124
Identity = 271/459 (59.04%), Postives = 314/459 (68.41%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLF+GGISWET EDKL++HF +YGEV   +VMRDK+T +PRGFGFV+F+DPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGG-GNMRTKKIFVGGLPPT 120
           DRVLQ+KH+ID + V+ KRA+SREEQQ   R GNLN +R+SGG    +TKKIFVGGLPPT
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 LTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQV 180
           LT+E F++YFE YG VTDV +MYDQ T RPRGFGF+SFD+E+AVD VLHKTFHDL+GKQV
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGG 240
           EVKRALPKDANPG GGRSMGG   SGGYQ YG     N +SYD RMDSNR++Q Q    G
Sbjct: 181 EVKRALPKDANPGGGGRSMGG-GGSGGYQGYGG----NESSYDGRMDSNRFLQHQSVGNG 240

Query: 241 FPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGP 300
            P YGSSGY   G GYG+ +NG GYG YG Y+GS  GYGA +   YG  N+  AGY S  
Sbjct: 241 LPSYGSSGY---GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSST 300

Query: 301 QGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQ 360
              PR+SW   A SGYG  GYG+         G A +G G PG+AP   SP   +GY NQ
Sbjct: 301 GVAPRNSWDTPASSGYGNPGYGS---------GAAHSGYGVPGAAPPTQSP---SGYSNQ 360

Query: 361 GYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMN 420
           GYGYG       GY G D  YG+Q+ YG  GGR     ++N G           SGGYM 
Sbjct: 361 GYGYG-------GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPG-----------SGGYMG 411

Query: 421 SGYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQ 459
            GYGD +         WRSD  Q GY GGY  GQ RQ Q
Sbjct: 421 GGYGDGS---------WRSDPSQ-GYGGGYNDGQGRQGQ 411

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BLAST of CmaCh08G010680 vs. ExPASy Swiss-Prot
Match: P51991 (Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE=1 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 3.8e-39
Identity = 131/368 (35.60%), Postives = 180/368 (48.91%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET++D L++HF  +G +   VVMRD  T + RGFGFV ++    +D  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTLTEEGF 126
           + H +DG+ VE KRA+SRE+   P             G ++  KKIFVGG+     E   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKP-------------GAHLTVKKIFVGGIKEDTEEYNL 155

Query: 127 KEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 186
           ++YFE YG +  + VM D+ + + RGF F++FD  + VD+++ + +H +NG   EVK+AL
Sbjct: 156 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKAL 215

Query: 187 PKD----------------------ANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDS 246
            K                        N G GG + G   + GG   YG  GG +  SY  
Sbjct: 216 SKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGNFGRGGNFGGRGGYGGGGGGSRGSYGG 275

Query: 247 RMDS-NRYMQSQGSSGGFPPYGS-SGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPS 306
                N +    G+ GG P Y S  GY   G GYG  N G GYGG G Y G N G     
Sbjct: 276 GDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYG--NQGGGYGGGGGYDGYNEG----- 335

Query: 307 AVAYGNPNVANAGYASGPQGGPRSSWSAQAPSGYGAM------GYGNAAPWGGAPGGNAG 344
                  N     Y  G       ++S Q  S YG M      G  + +P+GG  G  +G
Sbjct: 336 ------GNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYGG--GYGSG 375

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BLAST of CmaCh08G010680 vs. ExPASy Swiss-Prot
Match: P51989 (Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 6.1e-37
Identity = 127/356 (35.67%), Postives = 179/356 (50.28%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET+E+ L++++  +G +   VVMRD  + + RGFGFV F+  + +D  +  
Sbjct: 10  KLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMAT 69

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTLTEEGF 126
           + HTIDG+ VE KRA++REE   P             G ++  KK+FVGG+     E   
Sbjct: 70  RPHTIDGRVVEPKRAVAREESAKP-------------GAHVTVKKLFVGGIKEDTEEHHL 129

Query: 127 KEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 186
           +EYFE YG +  + ++ D+ + + RGF F++FD  + VD+++ + +H +NG   EV++AL
Sbjct: 130 REYFEEYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKIVLQKYHTINGHNAEVRKAL 189

Query: 187 PKD-------------ANPGAGGRSMGGSASS-------GGYQTYGSSGGVNSNSYDSRM 246
            K               N G G    GG+  S       GG   YG   G   N Y+   
Sbjct: 190 SKQEMQDVQNTRNNRGGNFGFGDSRGGGNFGSGPGGNFRGGSDGYGGGRGYGDNGYNGYG 249

Query: 247 DSNRYMQSQGSSGGFPPYGSSGYNNPGYGYGSSNNGMGY-GGYGNYSGSNTGYGAPSAVA 306
                 Q  G+ GG P YG       G G G  N G GY GGY NY G N G G  +   
Sbjct: 250 GG----QGGGNYGGGPSYGGGRGGGYGGGAGYGNQGGGYGGGYDNYGGGNYG-GGGNYND 309

Query: 307 YGNPNVANAGYASGPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGG 341
           +GN N  ++ Y     GG   ++      G G  G GN  P G A GGN G G GG
Sbjct: 310 FGNYNQQSSNYGPMKSGG---NFGGNRSMGGGPYGGGNYGP-GNASGGN-GGGYGG 342

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BLAST of CmaCh08G010680 vs. ExPASy Swiss-Prot
Match: P17130 (Heterogeneous nuclear ribonucleoproteins A1 homolog OS=Xenopus laevis OX=8355 GN=hnrnpa1 PE=2 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.5e-32
Identity = 134/397 (33.75%), Postives = 191/397 (48.11%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET+++ L++HF  +G +   VVMRD  + + RGFGFV +     +D  +  
Sbjct: 15  KLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTA 74

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTLTEEGF 126
           + H +DG+ VE KRA+SRE+   P             G ++  KKIFVGG+     E+  
Sbjct: 75  RPHKVDGRVVEPKRAVSREDSSRP-------------GAHLTVKKIFVGGIKEDTEEDHL 134

Query: 127 KEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 186
           +EYFE YG +  + +M D+ + + RGF F++F+  ++VD+++ + +H +N    +V++AL
Sbjct: 135 REYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKAL 194

Query: 187 PKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGFPPYGS 246
            K           G     GG   YGS GG  ++++  R          G + G    G 
Sbjct: 195 SKQEMASVS----GSQRERGGSGNYGSRGGFGNDNFGGR----------GGNFGGNRGGG 254

Query: 247 SGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQGGPRS 306
            G+ N GYG      G GY G G        +  PS + +      N GY +G  GG   
Sbjct: 255 GGFGNRGYG------GDGYNGDGQL------WWQPSLLGW------NRGYGAGQGGG--- 314

Query: 307 SWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGN------- 366
            + A    GYG  G G      G   G  G GSG  GS     S GG   +GN       
Sbjct: 315 -YGAGQGGGYGGGGQGGGYGGNGGYDGYNGGGSGFSGSGGNFGSSGGYNDFGNYNSQSSS 362

Query: 367 -----QGYGYGGFGNQG-YGYGGGDGSYGSQSGYGTG 390
                +G  YGG  N G YG G G GS  S SGYG G
Sbjct: 375 NFGPMKGGNYGGGRNSGPYGGGYGGGSASSSSGYGGG 362

[Close]

BLAST of CmaCh08G010680 vs. ExPASy Swiss-Prot
Match: Q8BG05 (Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.5e-32
Identity = 130/379 (34.30%), Postives = 180/379 (47.49%), Query Frame = 0


Query: 7   KLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDRVLQD 66
           KLFIGG+S+ET++D L++HF  +G +   VVMRD  T + RGFGFV ++    +D  +  
Sbjct: 36  KLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCA 95

Query: 67  K-HTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTLTEEGF 126
           + H +DG+ VE KRA+SRE+   P             G ++  KKIFVGG+     E   
Sbjct: 96  RPHKVDGRVVEPKRAVSREDSVKP-------------GAHLTVKKIFVGGIKEDTEEYNL 155

Query: 127 KEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 186
           ++YFE YG +  + VM D+ + + RGF F++FD  + VD+++ + +H +NG   EVK+AL
Sbjct: 156 RDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINGHNCEVKKAL 215

Query: 187 PKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGFPPYGS 246
            K     AG +   G  S       G+ GG   N               G+ GG   YG 
Sbjct: 216 SKQEMQSAGSQRGRGGGSGNFMGRGGNFGGGGGN-----------FGRGGNFGGRGGYGG 275

Query: 247 SGYNNPGYGYGSSNNGM-GYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQGGPR 306
            G  + G  YG  + G  G+GG G   G   GY +      G P   N G   G  GG  
Sbjct: 276 GGGGSRG-SYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGPGYGNQGGGYGGGGG-- 335

Query: 307 SSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYG 366
                    GY   G      +GG    N      G   +  G   GG+ G  + G  YG
Sbjct: 336 ------GYDGYNEGGNFGGGNYGGGGNYNDFGNYSGQQQSNYGPMKGGSFGGRSSGSPYG 377

Query: 367 GFGNQGYGYGGGDGSYGSQ 384
           G    GYG GGG G YGS+
Sbjct: 396 G----GYGSGGGSGGYGSR 377

[Close]

BLAST of CmaCh08G010680 vs. ExPASy TrEMBL
Match: A0A6J1KMT7 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111494753 PE=4 SV=1)

HSP 1 Score: 863.2 bits (2229), Expect = 4.8e-247
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 460

[Close]

BLAST of CmaCh08G010680 vs. ExPASy TrEMBL
Match: A0A6J1HK79 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464301 PE=4 SV=1)

HSP 1 Score: 857.4 bits (2214), Expect = 2.7e-245
Identity = 457/460 (99.35%), Postives = 457/460 (99.35%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSA SGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGG QAR SQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 460

[Close]

BLAST of CmaCh08G010680 vs. ExPASy TrEMBL
Match: A0A6J1CDB1 (heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN=LOC111009685 PE=4 SV=1)

HSP 1 Score: 799.3 bits (2063), Expect = 8.6e-228
Identity = 426/464 (91.81%), Postives = 442/464 (95.26%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKD+F +YG+V+HTVVMRDKITS+PRGFGFVVFADP++L
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFGNYGDVLHTVVMRDKITSRPRGFGFVVFADPAIL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRN----SGGGNMRTKKIFVGGL 120
           DRVLQ+KHTIDGKTVEAKRALSREEQQTPARAGN NATRN    SGGG+MRTKKIFVGGL
Sbjct: 61  DRVLQEKHTIDGKTVEAKRALSREEQQTPARAGNSNATRNSGGGSGGGSMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFE YG VTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGS 240
           KQVEVKRALPKDANPGAGGRSMGG A  GGYQ+YGSSGG NSNSYD+RMDSNRYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGGGAGGGGYQSYGSSGGANSNSYDNRMDSNRYMQSQGS 240

Query: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYA 300
           SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAP+AVAYGNPNVANAGY 
Sbjct: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNVANAGYG 300

Query: 301 SGPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGY 360
           SGPQGGPRS+WS QAPSGYGAMGYGNAAPWGGA G NAGAGSGGPGSAPTGHSPGGAAGY
Sbjct: 301 SGPQGGPRSTWSGQAPSGYGAMGYGNAAPWGGAAGNNAGAGSGGPGSAPTGHSPGGAAGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGG 420
           GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYG  GGRSGSASNSNVGGGPSGGELQGNSGG
Sbjct: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGAAGGRSGSASNSNVGGGPSGGELQGNSGG 420

Query: 421 YMNSGYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 461
           YM +GYGDANGN+GYGNA WRSDGGQVGYTGGY  GQARQ+QQQ
Sbjct: 421 YMGNGYGDANGNSGYGNAAWRSDGGQVGYTGGYAAGQARQAQQQ 464

[Close]

BLAST of CmaCh08G010680 vs. ExPASy TrEMBL
Match: A0A6J1H3Z2 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111460283 PE=4 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 4.3e-227
Identity = 431/465 (92.69%), Postives = 442/465 (95.05%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKD+F++YGEVMHTVVMRDKITS+PRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNS----GGGNMRTKKIFVGGL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARA N NATRNS    GGGNMRTKKIFVGGL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGGNMRTKKIFVGGL 120

Query: 121 PPTLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180
           PPTLTEEGFKEYFE YG VTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG
Sbjct: 121 PPTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNG 180

Query: 181 KQVEVKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGS 240
           KQVEVKRALPKDANPGAGGRSMGG    GGYQ YGSSGGVNSNSYDS MDS+RYMQSQGS
Sbjct: 181 KQVEVKRALPKDANPGAGGRSMGG----GGYQGYGSSGGVNSNSYDSHMDSSRYMQSQGS 240

Query: 241 SGGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYA 300
            GGFPPYGSSGY+NPGYGYGSSNNGMGYGGYGNYSGSNTGYGAP+AVAYGNPN ANAGY 
Sbjct: 241 GGGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPAAVAYGNPNAANAGYG 300

Query: 301 SGPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGY 360
           SGPQGGPRSSWS QAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGY
Sbjct: 301 SGPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGY 360

Query: 361 GNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGG 420
           GNQGYGYGG GNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGE+QGNSGG
Sbjct: 361 GNQGYGYGGLGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGEIQGNSGG 420

Query: 421 YMNSGYGDANG-NTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 461
           YM +GYGDANG NTGYGNA WRSDGGQVGYTGGY GGQARQ+QQQ
Sbjct: 421 YMGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 461

[Close]

BLAST of CmaCh08G010680 vs. ExPASy TrEMBL
Match: A0A6J1KWS0 (heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111498928 PE=4 SV=1)

HSP 1 Score: 789.3 bits (2037), Expect = 8.9e-225
Identity = 428/464 (92.24%), Postives = 439/464 (94.61%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKD+F++YGEVMHTVVMRDKITS+PRGFGFVVF+DPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNS---GGGNMRTKKIFVGGLP 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARA N NATRNS   GGGNMRTKKIFVGGLP
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARASNSNATRNSGGGGGGNMRTKKIFVGGLP 120

Query: 121 PTLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180
           PTLTEEGFKEYFE YG VTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK
Sbjct: 121 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGK 180

Query: 181 QVEVKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSS 240
           QVEVKRALPKDANPGAGG SMGGS    GYQ YGSSGGVNSNSYDSRMDS+RYMQSQGS 
Sbjct: 181 QVEVKRALPKDANPGAGGHSMGGS----GYQGYGSSGGVNSNSYDSRMDSSRYMQSQGSG 240

Query: 241 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYAS 300
           GGFPPYGSSGY+NPGYGYGSSNNGMGYGGYG+YS SNTGYGAP+AVAYGNPN ANAGY S
Sbjct: 241 GGFPPYGSSGYSNPGYGYGSSNNGMGYGGYGSYSSSNTGYGAPAAVAYGNPNAANAGYGS 300

Query: 301 GPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG 360
           GPQGGPRSSWS QAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG
Sbjct: 301 GPQGGPRSSWSTQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG 360

Query: 361 NQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGY 420
           NQGYGYGG GNQGYGYGGGDGSYGSQSGYG GGGRSGSASNSNVGG PSGGELQGNSGGY
Sbjct: 361 NQGYGYGGLGNQGYGYGGGDGSYGSQSGYGAGGGRSGSASNSNVGGAPSGGELQGNSGGY 420

Query: 421 MNSGYGDANG-NTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 461
           M +GYGDANG NTGYGNA WRSDGGQVGYTGGY GGQARQ+QQQ
Sbjct: 421 MGNGYGDANGNNTGYGNAAWRSDGGQVGYTGGYAGGQARQAQQQ 460

[Close]

BLAST of CmaCh08G010680 vs. NCBI nr
Match: XP_023000503.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima])

HSP 1 Score: 863.2 bits (2229), Expect = 1.0e-246
Identity = 460/460 (100.00%), Postives = 460/460 (100.00%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 460

[Close]

BLAST of CmaCh08G010680 vs. NCBI nr
Match: KAG7026154.1 (Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 859.4 bits (2219), Expect = 1.4e-245
Identity = 458/460 (99.57%), Postives = 458/460 (99.57%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSA SGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGG QARQSQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARQSQQQ 460

[Close]

BLAST of CmaCh08G010680 vs. NCBI nr
Match: XP_022964215.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata])

HSP 1 Score: 857.4 bits (2214), Expect = 5.5e-245
Identity = 457/460 (99.35%), Postives = 457/460 (99.35%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSA SGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGG QAR SQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARHSQQQ 460

[Close]

BLAST of CmaCh08G010680 vs. NCBI nr
Match: XP_023514049.1 (heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 857.1 bits (2213), Expect = 7.2e-245
Identity = 457/460 (99.35%), Postives = 457/460 (99.35%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSA SGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 181 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYG GDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 361 YGYGGFGNQGYGYGAGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420

Query: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 461
           GYGDANGNTGYGNAGWRSDGGQVGYTGGYGG QARQSQQQ
Sbjct: 421 GYGDANGNTGYGNAGWRSDGGQVGYTGGYGGAQARQSQQQ 460

[Close]

BLAST of CmaCh08G010680 vs. NCBI nr
Match: KAG6593820.1 (Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 830.1 bits (2143), Expect = 9.4e-237
Identity = 441/442 (99.77%), Postives = 441/442 (99.77%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL
Sbjct: 113 MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 172

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL
Sbjct: 173 DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 232

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE
Sbjct: 233 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 292

Query: 181 VKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 240
           VKRALPKDANPGAGGRSMGGSA SGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF
Sbjct: 293 VKRALPKDANPGAGGRSMGGSAGSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGGF 352

Query: 241 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 300
           PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ
Sbjct: 353 PPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGPQ 412

Query: 301 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 360
           GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG
Sbjct: 413 GGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQG 472

Query: 361 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 420
           YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS
Sbjct: 473 YGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMNS 532

Query: 421 GYGDANGNTGYGNAGWRSDGGQ 443
           GYGDANGNTGYGNAGWRSDGGQ
Sbjct: 533 GYGDANGNTGYGNAGWRSDGGQ 554

[Close]

BLAST of CmaCh08G010680 vs. TAIR 10
Match: AT4G14300.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 446.4 bits (1147), Expect = 2.7e-125
Identity = 271/459 (59.04%), Postives = 314/459 (68.41%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           MDSDQGKLF+GGISWET EDKL++HF +YGEV   +VMRDK+T +PRGFGFV+F+DPSVL
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGG-GNMRTKKIFVGGLPPT 120
           DRVLQ+KH+ID + V+ KRA+SREEQQ   R GNLN +R+SGG    +TKKIFVGGLPPT
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPT 120

Query: 121 LTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQV 180
           LT+E F++YFE YG VTDV +MYDQ T RPRGFGF+SFD+E+AVD VLHKTFHDL+GKQV
Sbjct: 121 LTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQV 180

Query: 181 EVKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGG 240
           EVKRALPKDANPG GGRSMGG   SGGYQ YG     N +SYD RMDSNR++Q Q    G
Sbjct: 181 EVKRALPKDANPGGGGRSMGG-GGSGGYQGYGG----NESSYDGRMDSNRFLQHQSVGNG 240

Query: 241 FPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGP 300
            P YGSSGY   G GYG+ +NG GYG YG Y+GS  GYGA +   YG  N+  AGY S  
Sbjct: 241 LPSYGSSGY---GAGYGNGSNGAGYGAYGGYTGSAGGYGAGATAGYGATNIPGAGYGSST 300

Query: 301 QGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQ 360
              PR+SW   A SGYG  GYG+         G A +G G PG+AP   SP   +GY NQ
Sbjct: 301 GVAPRNSWDTPASSGYGNPGYGS---------GAAHSGYGVPGAAPPTQSP---SGYSNQ 360

Query: 361 GYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMN 420
           GYGYG       GY G D  YG+Q+ YG  GGR     ++N G           SGGYM 
Sbjct: 361 GYGYG-------GYSGSDSGYGNQAAYGVVGGRPSGGGSNNPG-----------SGGYMG 411

Query: 421 SGYGDANGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQ 459
            GYGD +         WRSD  Q GY GGY  GQ RQ Q
Sbjct: 421 GGYGDGS---------WRSDPSQ-GYGGGYNDGQGRQGQ 411

[Close]

BLAST of CmaCh08G010680 vs. TAIR 10
Match: AT2G33410.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 430.6 bits (1106), Expect = 1.5e-120
Identity = 266/462 (57.58%), Postives = 321/462 (69.48%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           M+SDQGKLFIGGISW+T E+ L+++F+++GEV+   VMR+K T +PRGFGFV F+DP+V+
Sbjct: 1   MESDQGKLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVI 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRN-SGGGNMRTKKIFVGGLPPT 120
           DRVLQDKH ID + V+ KRA+SREEQ    R+G  NA+RN   G N+RTKKIFVGGLPP 
Sbjct: 61  DRVLQDKHHIDNRDVDVKRAMSREEQSPAGRSGTFNASRNFDSGANVRTKKIFVGGLPPA 120

Query: 121 LTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQV 180
           LT + F+ YFETYG V+D V+M DQ T+RPRGFGF+SFD+E++VD VLHKTFHDLNGKQV
Sbjct: 121 LTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFHDLNGKQV 180

Query: 181 EVKRALPKDANPGAGGRSMGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSSGG 240
           EVKRALPKDANPG       GS  +GG+  YG SGG   + Y+ R+DSNRYMQ Q +  G
Sbjct: 181 EVKRALPKDANPGIASGGGRGSGGAGGFPGYGGSGG---SGYEGRVDSNRYMQPQNTGSG 240

Query: 241 FPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYASGP 300
           +PPYG SGY   GYGYGS  NG+GYGG+G       GYG P+   YGNP+V  AG+ S  
Sbjct: 241 YPPYGGSGYGT-GYGYGS--NGVGYGGFG-------GYGNPAGAPYGNPSVPGAGFGS-- 300

Query: 301 QGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQ 360
             GPRSSW AQAPSGYG +GYGNAAPWG         GSGGPGSA  G + G +AGY   
Sbjct: 301 --GPRSSWGAQAPSGYGNVGYGNAAPWG---------GSGGPGSAVMGQA-GASAGY--- 360

Query: 361 GYGYGGFGNQGYGYGGGDGSYGSQSGYGTGGGRSGSASNSNVGGGPSGGELQGNSGGYMN 420
                  G+QGYGYGG D SYG+ S YG  GGRSG+  N++ GG                
Sbjct: 361 -------GSQGYGYGGNDSSYGTPSAYGAVGGRSGNMPNNHGGG---------------- 404

Query: 421 SGYGDA-NGNTGYGNAGWRSDGGQVGYTGGYGGGQARQSQQQ 461
            GY DA +G+ GYGN   + + GQ GY GGYG G  RQ+QQQ
Sbjct: 421 -GYADALDGSGGYGN--HQGNNGQAGYGGGYGSG--RQAQQQ 404

[Close]

BLAST of CmaCh08G010680 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 210.7 bits (535), Expect = 2.5e-54
Identity = 196/487 (40.25%), Postives = 267/487 (54.83%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           M SD GKLFIGGISW+T+E++LK++F+S+GEV+  V+++D+ T + RGFGFVVFADP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           + V+ +KH IDG+ VEAK+A+ R++Q    R+ N ++ + S GG  RT+KIFVGGLP ++
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRS-NSSSIQGSPGGPGRTRKIFVGGLPSSV 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TE  FK YFE +G  TDVVVMYD NT+RPRGFGFI++D+EEAV++VL KTFH+LNGK VE
Sbjct: 121 TESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSASSGGYQT----YGSSGGVNS---NSYDSRMDSNRYMQS 240
           VKRA+PK+ +PG     +G   S G  +      G + G N      Y  RMD       
Sbjct: 181 VKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMD------- 240

Query: 241 QGSSGGFPPYGS--SGYNNPGYGYGSSNN-----GMGYGGYGNYSGSNTGYGAPSAVAY- 300
               G F P G+  SG+ N   GYG + N       G+ G  NY+G N  YG   +  Y 
Sbjct: 241 ----GRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNG-NVDYGRGMSPYYI 300

Query: 301 GNPNVAN--AGYASGPQGGPRSSWSAQAPSGYGAMG-----------YGNAAPWGGAPGG 360
           GN N      GY  G  GG  S +S+   + +G  G             N    G + G 
Sbjct: 301 GNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGN 360

Query: 361 NAGAGSGGPGSAPTGHSPGGAAGYGNQG--YGYGGFGNQGYGYGGGDGSYGSQSGYGTGG 420
           N  +G  G      G   GG     N+   +GYGG G  G+G   G G Y +++      
Sbjct: 361 NTLSGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGL--GTGGYAARNPGANKA 420

Query: 421 GRSGSASNSNVGGGPSGGELQGNSGGYMNSGYGDANGNTG-YGNAGWRS----DGGQVGY 453
             S S S+++            N+ GY  +G  +  GN   Y +  WRS      G   +
Sbjct: 421 APSSSFSSASA----------TNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPF 462

[Close]

BLAST of CmaCh08G010680 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 210.7 bits (535), Expect = 2.5e-54
Identity = 196/487 (40.25%), Postives = 267/487 (54.83%), Query Frame = 0


Query: 1   MDSDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVL 60
           M SD GKLFIGGISW+T+E++LK++F+S+GEV+  V+++D+ T + RGFGFVVFADP+V 
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVLQDKHTIDGKTVEAKRALSREEQQTPARAGNLNATRNSGGGNMRTKKIFVGGLPPTL 120
           + V+ +KH IDG+ VEAK+A+ R++Q    R+ N ++ + S GG  RT+KIFVGGLP ++
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRS-NSSSIQGSPGGPGRTRKIFVGGLPSSV 120

Query: 121 TEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVE 180
           TE  FK YFE +G  TDVVVMYD NT+RPRGFGFI++D+EEAV++VL KTFH+LNGK VE
Sbjct: 121 TESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVE 180

Query: 181 VKRALPKDANPGAGGRSMGGSASSGGYQT----YGSSGGVNS---NSYDSRMDSNRYMQS 240
           VKRA+PK+ +PG     +G   S G  +      G + G N      Y  RMD       
Sbjct: 181 VKRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMD------- 240

Query: 241 QGSSGGFPPYGS--SGYNNPGYGYGSSNN-----GMGYGGYGNYSGSNTGYGAPSAVAY- 300
               G F P G+  SG+ N   GYG + N       G+ G  NY+G N  YG   +  Y 
Sbjct: 241 ----GRFSPVGAGRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNG-NVDYGRGMSPYYI 300

Query: 301 GNPNVAN--AGYASGPQGGPRSSWSAQAPSGYGAMG-----------YGNAAPWGGAPGG 360
           GN N      GY  G  GG  S +S+   + +G  G             N    G + G 
Sbjct: 301 GNTNRFGPAVGYEGGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGN 360

Query: 361 NAGAGSGGPGSAPTGHSPGGAAGYGNQG--YGYGGFGNQGYGYGGGDGSYGSQSGYGTGG 420
           N  +G  G      G   GG     N+   +GYGG G  G+G   G G Y +++      
Sbjct: 361 NTLSGPFGNSGVNWGAPGGGNNAVSNENVKFGYGGNGESGFGL--GTGGYAARNPGANKA 420

Query: 421 GRSGSASNSNVGGGPSGGELQGNSGGYMNSGYGDANGNTG-YGNAGWRS----DGGQVGY 453
             S S S+++            N+ GY  +G  +  GN   Y +  WRS      G   +
Sbjct: 421 APSSSFSSASA----------TNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPF 462

[Close]

BLAST of CmaCh08G010680 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.7e-47
Identity = 187/461 (40.56%), Postives = 249/461 (54.01%), Query Frame = 0


Query: 3   SDQGKLFIGGISWETSEDKLKDHFNSYGEVMHTVVMRDKITSKPRGFGFVVFADPSVLDR 62
           SD GKLFIGGISW+T E++L+++F  YG+++  V+MRD+ T + RGFGF+VFADPSV +R
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VLQDKHTIDGKTVEAKRALSREEQQTPARAGN----LNATRNSGGGNMRTKKIFVGGLPP 122
           V+ DKH IDG+TVEAK+A+ R++QQ   R  +    ++ +    GG  RTKKIFVGGLP 
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131

Query: 123 TLTEEGFKEYFETYGDVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQ 182
           ++TE  FK YF+ +G + DVVVMYD NT+RPRGFGFI+FD+EE+VD VLHKTFH+LNGK 
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191

Query: 183 VEVKRALPKDANPGAGGRS-MGGSASSGGYQTYGSSGGVNSNSYDSRMDSNRYMQSQGSS 242
           VEVKRA+PK+ +     RS + G  ++ G     SS     NS+    ++N    + GS+
Sbjct: 192 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNN----NLGSA 251

Query: 243 GGFPPYGSSGYNNPGYGYGSSNNGMGYGGYGNYSGSNTGYGAPSAVAYGNPNVANAGYAS 302
           G F P GS       +G G +          N+ G+  GY       Y N   A+    +
Sbjct: 252 GRFSPIGSGRNAFSSFGLGLNQE---LNLNSNFDGNTLGYSRIPGNQYFNS--ASPNRYN 311

Query: 303 GPQGGPRSSWSAQAPSGYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYG 362
            P G  R   SA  PS      +GN +   G PG N G   G       G+    +    
Sbjct: 312 SPIGYNRGD-SAYNPSNRDL--WGNRSDSSG-PGWNLGVSVGN----NRGNWGLSSVVSD 371

Query: 363 NQGYG--YG-GFGNQGYGYGGGDGSYGSQSG--YGTGGGRSGSASNSNVGGGPSGGELQG 422
           N GYG  YG G G  G  + G    +    G  Y      S S    ++    S  EL G
Sbjct: 372 NNGYGRSYGAGSGLSGLSFAGNTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDG 431

Query: 423 NSGGYMNSGYG-DANGNTGYGNAGWRSDGGQVGYTGGYGGG 453
            S  Y   G+G D  G+    NA         GY+G Y  G
Sbjct: 432 LSRSY---GFGIDNVGSDPSANA-------SEGYSGNYNVG 445

The following BLAST results are available for this feature:

BLAST of CmaCh08G010680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	3.8e-124	59.04	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
P51991	3.8e-39	35.60	Heterogeneous nuclear ribonucleoprotein A3 OS=Homo sapiens OX=9606 GN=HNRNPA3 PE...	[more]
P51989	6.1e-37	35.67	Heterogeneous nuclear ribonucleoprotein A2 homolog 1 OS=Xenopus laevis OX=8355 P...	[more]
P17130	1.5e-32	33.75	Heterogeneous nuclear ribonucleoproteins A1 homolog OS=Xenopus laevis OX=8355 GN...	[more]
Q8BG05	1.5e-32	34.30	Heterogeneous nuclear ribonucleoprotein A3 OS=Mus musculus OX=10090 GN=Hnrnpa3 P...	[more]

BLAST of CmaCh08G010680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KMT7	4.8e-247	100.00	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1HK79	2.7e-245	99.35	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1CDB1	8.6e-228	91.81	heterogeneous nuclear ribonucleoprotein 1-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1H3Z2	4.3e-227	92.69	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1KWS0	8.9e-225	92.24	heterogeneous nuclear ribonucleoprotein 1-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CmaCh08G010680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023000503.1	1.0e-246	100.00	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima]	[more]
KAG7026154.1	1.4e-245	99.57	Heterogeneous nuclear ribonucleoprotein 1 [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022964215.1	5.5e-245	99.35	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata]	[more]
XP_023514049.1	7.2e-245	99.35	heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo]	[more]
KAG6593820.1	9.4e-237	99.77	Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of CmaCh08G010680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14300.1	2.7e-125	59.04	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT2G33410.1	1.5e-120	57.58	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	2.5e-54	40.25	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	2.5e-54	40.25	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	1.7e-47	40.56	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..78 e-value: 1.5E-19 score: 81.0 coord: 110..182 e-value: 5.1E-25 score: 99.1
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 111..169 e-value: 2.2E-16 score: 59.4 coord: 8..75 e-value: 1.7E-14 score: 53.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 16.329578
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 109..186 score: 18.751446
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 88..203 e-value: 1.5E-26 score: 95.0
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..87 e-value: 8.1E-24 score: 85.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 381..435
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..105
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..460
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..243
None	No IPR available	PANTHER	PTHR48035	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..458
None	No IPR available	PANTHER	PTHR48035:SF2	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1	coord: 1..458
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 3.17903E-35 score: 123.465
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 107..186 e-value: 3.4822E-45 score: 150.209
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..106
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 108..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G010680.1	CmaCh08G010680.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding