CmaCh08G010370 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGAAAATTCTGAACACCATTCTCCTCCTCCTCTTCGTCTCAGCATTCTCCTTCTTCATCTTCATCATCCAACCAGACAGACTATACCTACACGGGGTCGTCTACGAGGTTCGAGTCATCAATGGCTTCACCAACAATTCATCTTTGCCTTTGGTCATATGGTGTTCTTCAAAAGACAGCGATTTGGGTGGGAGGGCGTTGCAAGAACACGATGATTTCAGCTGGAGAGTCACAACCAAGCTGTGGAACACCAACCAATTCTGTTGTACCATGAAATGGGATGCCAAAAGGAAGTCTTTTGATGCGTTTAAGGTTCCAAGGGACTTCTACCGATGTGGGATTTTCAAGAAATGTTCTTGGTTGGTTAGGGAAGATGGCTTCTACTTTAGCCCTGATGAGGTTAATTGGAAGAAGGATTTTCAGTGGTGA ATGAAGAAGAAAATTCTGAACACCATTCTCCTCCTCCTCTTCGTCTCAGCATTCTCCTTCTTCATCTTCATCATCCAACCAGACAGACTATACCTACACGGGGTCGTCTACGAGGTTCGAGTCATCAATGGCTTCACCAACAATTCATCTTTGCCTTTGGTCATATGGTGTTCTTCAAAAGACAGCGATTTGGGTGGGAGGGCGTTGCAAGAACACGATGATTTCAGCTGGAGAGTCACAACCAAGCTGTGGAACACCAACCAATTCTGTTGTACCATGAAATGGGATGCCAAAAGGAAGTCTTTTGATGCGTTTAAGGTTCCAAGGGACTTCTACCGATGTGGGATTTTCAAGAAATGTTCTTGGTTGGTTAGGGAAGATGGCTTCTACTTTAGCCCTGATGAGGTTAATTGGAAGAAGGATTTTCAGTGGTGA ATGAAGAAGAAAATTCTGAACACCATTCTCCTCCTCCTCTTCGTCTCAGCATTCTCCTTCTTCATCTTCATCATCCAACCAGACAGACTATACCTACACGGGGTCGTCTACGAGGTTCGAGTCATCAATGGCTTCACCAACAATTCATCTTTGCCTTTGGTCATATGGTGTTCTTCAAAAGACAGCGATTTGGGTGGGAGGGCGTTGCAAGAACACGATGATTTCAGCTGGAGAGTCACAACCAAGCTGTGGAACACCAACCAATTCTGTTGTACCATGAAATGGGATGCCAAAAGGAAGTCTTTTGATGCGTTTAAGGTTCCAAGGGACTTCTACCGATGTGGGATTTTCAAGAAATGTTCTTGGTTGGTTAGGGAAGATGGCTTCTACTTTAGCCCTGATGAGGTTAATTGGAAGAAGGATTTTCAGTGGTGA MKKKILNTILLLLFVSAFSFFIFIIQPDRLYLHGVVYEVRVINGFTNNSSLPLVIWCSSKDSDLGGRALQEHDDFSWRVTTKLWNTNQFCCTMKWDAKRKSFDAFKVPRDFYRCGIFKKCSWLVREDGFYFSPDEVNWKKDFQW Homology
BLAST of CmaCh08G010370 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 52.0 bits (123), Expect = 6.6e-06 Identity = 26/83 (31.33%), Postives = 41/83 (49.40%), Query Frame = 0
BLAST of CmaCh08G010370 vs. ExPASy TrEMBL
Match: A0A6J1KN10 (S-protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111494815 PE=3 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 4.9e-81 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of CmaCh08G010370 vs. ExPASy TrEMBL
Match: A0A6J1HNC1 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111464494 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 1.9e-80 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of CmaCh08G010370 vs. ExPASy TrEMBL
Match: A0A5D3CZS1 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001360 PE=3 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.8e-70 Identity = 124/143 (86.71%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of CmaCh08G010370 vs. ExPASy TrEMBL
Match: A0A1S4E2Y6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103499490 PE=3 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 1.8e-70 Identity = 124/143 (86.71%), Postives = 132/143 (92.31%), Query Frame = 0
BLAST of CmaCh08G010370 vs. ExPASy TrEMBL
Match: A0A0A0LNI8 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G153590 PE=3 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.0e-62 Identity = 109/123 (88.62%), Postives = 117/123 (95.12%), Query Frame = 0
BLAST of CmaCh08G010370 vs. NCBI nr
Match: XP_023000578.1 (S-protein homolog 5 [Cucurbita maxima]) HSP 1 Score: 310.1 bits (793), Expect = 1.0e-80 Identity = 144/144 (100.00%), Postives = 144/144 (100.00%), Query Frame = 0
BLAST of CmaCh08G010370 vs. NCBI nr
Match: XP_022964484.1 (S-protein homolog 5-like [Cucurbita moschata]) HSP 1 Score: 308.1 bits (788), Expect = 3.9e-80 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of CmaCh08G010370 vs. NCBI nr
Match: XP_023515117.1 (S-protein homolog 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 305.8 bits (782), Expect = 1.9e-79 Identity = 140/144 (97.22%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of CmaCh08G010370 vs. NCBI nr
Match: KAG7026123.1 (S-protein-like 20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 301.6 bits (771), Expect = 3.6e-78 Identity = 142/144 (98.61%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of CmaCh08G010370 vs. NCBI nr
Match: KAG6593795.1 (S-protein-like 5, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 281.2 bits (718), Expect = 5.1e-72 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of CmaCh08G010370 vs. TAIR 10
Match: AT3G24060.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 173.3 bits (438), Expect = 1.4e-43 Identity = 82/144 (56.94%), Postives = 101/144 (70.14%), Query Frame = 0
BLAST of CmaCh08G010370 vs. TAIR 10
Match: AT1G26798.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 64.7 bits (156), Expect = 7.0e-11 Identity = 34/93 (36.56%), Postives = 46/93 (49.46%), Query Frame = 0
BLAST of CmaCh08G010370 vs. TAIR 10
Match: AT5G04350.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 58.5 bits (140), Expect = 5.0e-09 Identity = 30/91 (32.97%), Postives = 39/91 (42.86%), Query Frame = 0
BLAST of CmaCh08G010370 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family ) HSP 1 Score: 52.0 bits (123), Expect = 4.7e-07 Identity = 26/83 (31.33%), Postives = 41/83 (49.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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