CmaCh08G010180 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G010180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Cytochrome c oxidase subunit 2
Location	Cma_Chr08: 6380232 .. 6381254 (+)
RNA-Seq Expression	CmaCh08G010180
Synteny	CmaCh08G010180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCATTGCTATACCATCCTTTACTCTCTTATACTCAATGGACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGAACTTATGAGTATTCTGACTATAACCGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATTTAGAATTGGGTCAATCACGTTTATTAGAAGTGGACAATAGAGTGGTTCTACCAGCCAAAACTCATCTACGTATTATTGTAACACCTGCTGATGTACCTCATAGTTGAGCTGTACCTTCCTCAGGTGTCAAATGTGATGTTGTACCTGGTCGTTTAAATCAAATCTCCATCTTGGTACAACGAGAAGGAGTTTACTATGGTCAGTGCAGTGAGATTTGTGGAACTAATCATGCCTTTACGCATGCGCCCGGAAACATAGGCCGACTGCTGAGCCCACTCTGGCTTAGCCGCACCACCTGAGAAGCAAGCTATTACAGCGAGCGGCTGGAGCCGTAGAAAGCCGAGGAGCAAAGCTGTAGATAAGATCGAAGAAGGGGCCAGGCTCCCGGTGGAGCAGAGGAGACGGTTAGGATAACGAACTTGAAACGTGGAGCCCGAGCGGCCGACGAGCGAGTGGTTAGTGGCCAATAGCACCCTAGAGTTTCATTATCTTAGGTTATGAATTTGAGTAAATTTTATAAATTCACCCCTTTTAATCTTAATAATTACATTCTAATTATTCGTTTTCTCAATACAATAATTGATAAGTGCTATCAGTATTGAATTTACGAAACTAGAGGTTTTTCTAGGATCATTGCAAACATTCACAAATGGGTTATCTTCACGACTATTCCAACTAAGAGCTTAGTTAGAATGGTGAATAACATATCATTATTAAATCTCGAGACTAACCGAATGAGTCGATTAAATTTCAATCCTACAGCAAAATTTGAAGAGCAAGACAACACCCAAGGGTTTTATGAAACACGAGTCTTGAGATTCAATAATCTACCGTTTCTATGA

mRNA sequence

ATGTTCATTGCTATACCATCCTTTACTCTCTTATACTCAATGGACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGAACTTATGAGTATTCTGACTATAACCGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATTTAGAATTGGGTCAATCACGTTTATTAGAAGTGGACAATAGAGTGGTTCTACCAGCCAAAACTCATCTACGTATTATTGTAACACCTGCTGATGTACCTCATAGTGTCAAATGTGATGTTGTACCTGGTCGTTTAAATCAAATCTCCATCTTGGTACAACGAGAAGGAGTTTACTATGCAAAATTTGAAGAGCAAGACAACACCCAAGGGTTTTATGAAACACGAGTCTTGAGATTCAATAATCTACCGTTTCTATGA

Coding sequence (CDS)

ATGTTCATTGCTATACCATCCTTTACTCTCTTATACTCAATGGACGAGGTAGTAGTAGATCCAGCCATGACTATCAAAGCTATTGGACATCAATGGTATCGAACTTATGAGTATTCTGACTATAACCGTTCCGATGAACAGTCACTCACTTTTGACAGTTATACGATTCCAGAAGATGATTTAGAATTGGGTCAATCACGTTTATTAGAAGTGGACAATAGAGTGGTTCTACCAGCCAAAACTCATCTACGTATTATTGTAACACCTGCTGATGTACCTCATAGTGTCAAATGTGATGTTGTACCTGGTCGTTTAAATCAAATCTCCATCTTGGTACAACGAGAAGGAGTTTACTATGCAAAATTTGAAGAGCAAGACAACACCCAAGGGTTTTATGAAACACGAGTCTTGAGATTCAATAATCTACCGTTTCTATGA

Protein sequence

MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDDLELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSVKCDVVPGRLNQISILVQREGVYYAKFEEQDNTQGFYETRVLRFNNLPFL

Homology

[Close]

BLAST of CmaCh08G010180 vs. ExPASy Swiss-Prot
Match: P05491 (Cytochrome c oxidase subunit 2 OS=Glycine max OX=3847 GN=COX2 PE=3 SV=2)

HSP 1 Score: 224.2 bits (570), Expect = 9.7e-58
Identity = 114/131 (87.02%), Postives = 117/131 (89.31%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 93  MFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 152

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVV+PAKTHLRIIVTPADVPHS       VKCD VPGRLNQISI VQ
Sbjct: 153 LELGQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSLGVKCDAVPGRLNQISISVQ 212

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 213 REGVYYGQCSE 223

[Close]

BLAST of CmaCh08G010180 vs. ExPASy Swiss-Prot
Match: P27168 (Cytochrome c oxidase subunit 2 OS=Daucus carota OX=4039 GN=COX2 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.8e-56
Identity = 113/131 (86.26%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 95  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 154

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
            ELGQSRLLEVDNRVV+PAKTHLRIIVT ADVPHS       VKCD VPGRLNQISI VQ
Sbjct: 155 PELGQSRLLEVDNRVVVPAKTHLRIIVTSADVPHSWAVPSSGVKCDAVPGRLNQISISVQ 214

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 215 REGVYYGQCSE 225

[Close]

BLAST of CmaCh08G010180 vs. ExPASy Swiss-Prot
Match: P08744 (Cytochrome c oxidase subunit 2 OS=Pisum sativum OX=3888 GN=COX2 PE=3 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-56
Identity = 112/131 (85.50%), Postives = 115/131 (87.79%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMD V+VDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 93  MFIAIPSFALLYSMDGVLVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 152

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQS LLEVDNRVV+PAKTHLRIIVTPADVPHS       VKCD VPGRLNQISI VQ
Sbjct: 153 LELGQSGLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSLGVKCDAVPGRLNQISISVQ 212

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 213 REGVYYGQCSE 223

[Close]

BLAST of CmaCh08G010180 vs. ExPASy Swiss-Prot
Match: P98012 (Cytochrome c oxidase subunit 2 OS=Beta vulgaris OX=161934 GN=COX2 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 2.9e-54
Identity = 109/131 (83.21%), Postives = 114/131 (87.02%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPA+TIKAIGHQWYR+YEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYRSYEYSDYNSSDEQSLTFDSYTIPEDD 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
            ELGQSRLLEVDNRVV+PAKTH+RIIVT ADV HS       VKCD VPGRLNQ SILVQ
Sbjct: 154 PELGQSRLLEVDNRVVVPAKTHIRIIVTSADVLHSWAVPSSGVKCDAVPGRLNQTSILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

[Close]

BLAST of CmaCh08G010180 vs. ExPASy Swiss-Prot
Match: P93285 (Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana OX=3702 GN=COX2 PE=1 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 1.5e-53
Identity = 109/131 (83.21%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPA+TIKAIGHQWY TYEYSDYN SDEQSLTFDSY IPE+D
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYWTYEYSDYNSSDEQSLTFDSYMIPEED 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQ RLLEVDNRVV+PAKTHLRIIVT ADV HS       VKCD VPGRLNQISILVQ
Sbjct: 154 LELGQLRLLEVDNRVVVPAKTHLRIIVTSADVLHSWAVPSLGVKCDAVPGRLNQISILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

[Close]

BLAST of CmaCh08G010180 vs. ExPASy TrEMBL
Match: A0A7D6C0E1 (Cytochrome c oxidase subunit 2 OS=Luffa acutangula OX=56866 GN=cox2 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 154 LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

[Close]

BLAST of CmaCh08G010180 vs. ExPASy TrEMBL
Match: A0A5A7SRN3 (Cytochrome-c oxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43632G00010 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 1   MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 60

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 120

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 121 REGVYYGQCSE 131

[Close]

BLAST of CmaCh08G010180 vs. ExPASy TrEMBL
Match: G3EU21 (Cytochrome c oxidase subunit 2 OS=Cucumis melo subsp. melo OX=412675 GN=cox2 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 154 LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

[Close]

BLAST of CmaCh08G010180 vs. ExPASy TrEMBL
Match: G3EJ04 (Cytochrome c oxidase subunit 2 OS=Cucumis sativus OX=3659 GN=cox2 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 154 LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

[Close]

BLAST of CmaCh08G010180 vs. ExPASy TrEMBL
Match: A0A3S9JIH4 (Cytochrome c oxidase subunit 2 OS=Cucumis melo var. momordica OX=2034244 GN=cox2 PE=3 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.1e-56
Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 154 LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

[Close]

BLAST of CmaCh08G010180 vs. NCBI nr
Match: KAE8648249.1 (hypothetical protein Csa_018529 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-56
Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 154 LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

[Close]

BLAST of CmaCh08G010180 vs. NCBI nr
Match: YP_004849352.1 (cytochrome c oxidase subunit 2 [Cucumis sativus] >ADZ10779.1 cytochrome c oxidase subunit 2 [Cucumis sativus])

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-56
Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 154 LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

[Close]

BLAST of CmaCh08G010180 vs. NCBI nr
Match: YP_009913658.1 (cytochrome c oxidase subunit 2 [Luffa acutangula] >QLJ93008.1 cytochrome c oxidase subunit 2 [Luffa acutangula])

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-56
Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 154 LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

[Close]

BLAST of CmaCh08G010180 vs. NCBI nr
Match: AEN56105.1 (cytochrome c oxidase subunit 2 [Cucumis melo subsp. melo] >AZP40299.1 cytochrome c oxidase subunit 2 [Cucumis melo var. momordica])

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-56
Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 154 LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

[Close]

BLAST of CmaCh08G010180 vs. NCBI nr
Match: KAA0033570.1 (cytochrome c oxidase subunit 2 [Cucumis melo var. makuwa])

HSP 1 Score: 229.2 bits (583), Expect = 2.3e-56
Identity = 117/131 (89.31%), Postives = 118/131 (90.08%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYN SDEQSLTFDSYTIPEDD
Sbjct: 1   MFIAIPSFALLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYTIPEDD 60

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 120

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 121 REGVYYGQCSE 131

[Close]

BLAST of CmaCh08G010180 vs. TAIR 10
Match: ATMG00160.1 (cytochrome oxidase 2 )

HSP 1 Score: 219.5 bits (558), Expect = 1.7e-57
Identity = 112/131 (85.50%), Postives = 116/131 (88.55%), Query Frame = 0


Query: 1   MFIAIPSFTLLYSMDEVVVDPAMTIKAIGHQWYRTYEYSDYNRSDEQSLTFDSYTIPEDD 60
           MFIAIPSF LLYSMDEVVVDPA+TIKAIGHQWYRTYEYSDYN SDEQSLTFDSY IPE+D
Sbjct: 94  MFIAIPSFALLYSMDEVVVDPAITIKAIGHQWYRTYEYSDYNSSDEQSLTFDSYMIPEED 153

Query: 61  LELGQSRLLEVDNRVVLPAKTHLRIIVTPADVPHS-------VKCDVVPGRLNQISILVQ 120
           LELGQSRLLEVDNRVV+PAKTHLRIIVT ADVPHS       VKCD VPGRLNQISILVQ
Sbjct: 154 LELGQSRLLEVDNRVVVPAKTHLRIIVTSADVPHSWAVPSSGVKCDAVPGRLNQISILVQ 213

Query: 121 REGVYYAKFEE 125
           REGVYY +  E
Sbjct: 214 REGVYYGQCSE 224

The following BLAST results are available for this feature:

BLAST of CmaCh08G010180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P05491	9.7e-58	87.02	Cytochrome c oxidase subunit 2 OS=Glycine max OX=3847 GN=COX2 PE=3 SV=2	[more]
P27168	1.8e-56	86.26	Cytochrome c oxidase subunit 2 OS=Daucus carota OX=4039 GN=COX2 PE=3 SV=1	[more]
P08744	3.1e-56	85.50	Cytochrome c oxidase subunit 2 OS=Pisum sativum OX=3888 GN=COX2 PE=3 SV=2	[more]
P98012	2.9e-54	83.21	Cytochrome c oxidase subunit 2 OS=Beta vulgaris OX=161934 GN=COX2 PE=2 SV=1	[more]
P93285	1.5e-53	83.21	Cytochrome c oxidase subunit 2 OS=Arabidopsis thaliana OX=3702 GN=COX2 PE=1 SV=2	[more]

BLAST of CmaCh08G010180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7D6C0E1	1.1e-56	89.31	Cytochrome c oxidase subunit 2 OS=Luffa acutangula OX=56866 GN=cox2 PE=3 SV=1	[more]
A0A5A7SRN3	1.1e-56	89.31	Cytochrome-c oxidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold436...	[more]
G3EU21	1.1e-56	89.31	Cytochrome c oxidase subunit 2 OS=Cucumis melo subsp. melo OX=412675 GN=cox2 PE=...	[more]
G3EJ04	1.1e-56	89.31	Cytochrome c oxidase subunit 2 OS=Cucumis sativus OX=3659 GN=cox2 PE=3 SV=1	[more]
A0A3S9JIH4	1.1e-56	89.31	Cytochrome c oxidase subunit 2 OS=Cucumis melo var. momordica OX=2034244 GN=cox2...	[more]

BLAST of CmaCh08G010180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8648249.1	2.3e-56	89.31	hypothetical protein Csa_018529 [Cucumis sativus]	[more]
YP_004849352.1	2.3e-56	89.31	cytochrome c oxidase subunit 2 [Cucumis sativus] >ADZ10779.1 cytochrome c oxidas...	[more]
YP_009913658.1	2.3e-56	89.31	cytochrome c oxidase subunit 2 [Luffa acutangula] >QLJ93008.1 cytochrome c oxida...	[more]
AEN56105.1	2.3e-56	89.31	cytochrome c oxidase subunit 2 [Cucumis melo subsp. melo] >AZP40299.1 cytochrome...	[more]
KAA0033570.1	2.3e-56	89.31	cytochrome c oxidase subunit 2 [Cucumis melo var. makuwa]	[more]

BLAST of CmaCh08G010180 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00160.1	1.7e-57	85.50	cytochrome oxidase 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01166	CYCOXIDASEII	coord: 104..121 score: 46.87 coord: 19..38 score: 64.43 coord: 84..104 score: 31.68
None	No IPR available	PANTHER	PTHR22888	CYTOCHROME C OXIDASE, SUBUNIT II	coord: 1..125
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 20..125 e-value: 1.7E-22 score: 81.7
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 20..120
IPR002429	Cytochrome c oxidase subunit II-like C-terminal	PFAM	PF00116	COX2	coord: 23..123 e-value: 1.8E-34 score: 118.2
IPR002429	Cytochrome c oxidase subunit II-like C-terminal	PROSITE	PS50857	COX2_CUA	coord: 20..145 score: 21.355858
IPR011759	Cytochrome C oxidase subunit II, transmembrane domain	PROSITE	PS50999	COX2_TM	coord: 1..18 score: 8.791211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G010180.1	CmaCh08G010180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0070469	respirasome
cellular_component	GO:0016020	membrane
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0004129	cytochrome-c oxidase activity