CmaCh08G010160 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTTGCTCGCTTTAGCCCTAATCTCTCGATTTCGAAGTGGAAATTTCTCTTCTATATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACCGGCAGGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAGTGAGTGATTGTGATTCGAATTCAATTCATTTCGTTCCGATTTCATTTTCTAGGTTTTTTTTTTTTTTTTGGAAGAAATTTATGTGAGACGATACTGACGGAATCTGCTCCGAATCGTATTGATTTCAGAGGTAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTCATCGGCGGATAAAACGACTGCGTCTGGTAAGAAGAACGTAAGGACGGATACAGTTGCAGTGGCGTGAGTTCCGATGAAGAAATCTTGAGATAAAGAACGGAAAACAGAGAAAGAAAAGGAAATTCAGATTCAAATGCGAGAGGAAAAGATTGGTGTTCTTCGAACACAGAAACACAAAAGGAGAGAAAGAAATGGAAATTCAGATTGAGATTTCTTCCTGTGGAGAAGAATCGATTGGCAGAGGCTATACAGAACTGTTCTGCTTCAATCTCTCTACTCAGCTTTTCAATTTTTTGTTTAAATTATAAATAAAAAAAGTTTGAATTTCATATAAATTGTTATATGAACTAGAATCCTAATTTTTAATTTTAATTTTTAGATGGATGTAATTTTCTTTTGTTATTTTAAAATACAGGCACAGATCCATATATATGTATGGTACATTTCGTGTTCCATTTTTGTTCCTTTTGTTTTGTTTTATTTCCTAAAACTGCAAGTACTATGTACTTTGTTATTTAATATTTAAATAAAACTATAGATGTACTGA TCTTGCTCGCTTTAGCCCTAATCTCTCGATTTCGAAGTGGAAATTTCTCTTCTATATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACCGGCAGGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAAGGTAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTCATCGGCGGATAAAACGACTGCGTCTGGTAAGAAGAACGTAAGGACGGATACAGTTGCAGTGGCGTGAGTTCCGATGAAGAAATCTTGAGATAAAGAACGGAAAACAGAGAAAGAAAAGGAAATTCAGATTCAAATGCGAGAGGAAAAGATTGGTGTTCTTCGAACACAGAAACACAAAAGGAGAGAAAGAAATGGAAATTCAGATTGAGATTTCTTCCTGTGGAGAAGAATCGATTGGCAGAGGCTATACAGAACTGTTCTGCTTCAATCTCTCTACTCAGCTTTTCAATTTTTTGTTTAAATTATAAATAAAAAAAGTTTGAATTTCATATAAATTGTTATATGAACTAGAATCCTAATTTTTAATTTTAATTTTTAGATGGATGTAATTTTCTTTTGTTATTTTAAAATACAGGCACAGATCCATATATATGTATGGTACATTTCGTGTTCCATTTTTGTTCCTTTTGTTTTGTTTTATTTCCTAAAACTGCAAGTACTATGTACTTTGTTATTTAATATTTAAATAAAACTATAGATGTACTGA ATGAGGAACGGAATGCGGTACCATGGCGGCGGTGATGATCACCGGCAGGAATCTCATTTCCTCGAAGCTTGCTTCCTCTGCCGGAGGCCGCTCGGATTCAACCGAGACATTTTCATGTACAAAGGTAACACGCCGTTCTGTAGCAAAGAGTGCCGGCAGGAACAGATTGAAATGGACGAAGCGCAGGAGAAGAGCTGGAGAATGTCTTCGTCGTCATCGGCGGATAAAACGACTGCGTCTGGTAAGAAGAACGTAAGGACGGATACAGTTGCAGTGGCGTGA MRNGMRYHGGGDDHRQESHFLEACFLCRRPLGFNRDIFMYKGNTPFCSKECRQEQIEMDEAQEKSWRMSSSSSADKTTASGKKNVRTDTVAVA Homology
BLAST of CmaCh08G010160 vs. ExPASy Swiss-Prot
Match: Q9FGQ9 (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 8.2e-18 Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of CmaCh08G010160 vs. ExPASy Swiss-Prot
Match: O80506 (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 88.2 bits (217), Expect = 5.3e-17 Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of CmaCh08G010160 vs. ExPASy Swiss-Prot
Match: Q8VZM9 (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of CmaCh08G010160 vs. ExPASy Swiss-Prot
Match: Q9SGZ8 (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 1.7e-10 Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CmaCh08G010160 vs. ExPASy Swiss-Prot
Match: Q9FH22 (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 9.1e-09 Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 0
BLAST of CmaCh08G010160 vs. ExPASy TrEMBL
Match: A0A6J1KJX8 (uncharacterized protein LOC111494701 OS=Cucurbita maxima OX=3661 GN=LOC111494701 PE=3 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 5.7e-46 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of CmaCh08G010160 vs. ExPASy TrEMBL
Match: A0A6J1HKB3 (uncharacterized protein LOC111464337 OS=Cucurbita moschata OX=3662 GN=LOC111464337 PE=3 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45 Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of CmaCh08G010160 vs. ExPASy TrEMBL
Match: A0A0A0LHK0 (FLZ-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G118280 PE=3 SV=1) HSP 1 Score: 171.8 bits (434), Expect = 1.4e-39 Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of CmaCh08G010160 vs. ExPASy TrEMBL
Match: A0A6J1H3Y3 (uncharacterized protein LOC111460275 OS=Cucurbita moschata OX=3662 GN=LOC111460275 PE=3 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.2e-39 Identity = 83/95 (87.37%), Postives = 89/95 (93.68%), Query Frame = 0
BLAST of CmaCh08G010160 vs. ExPASy TrEMBL
Match: A0A6J1L079 (uncharacterized protein LOC111499186 OS=Cucurbita maxima OX=3661 GN=LOC111499186 PE=3 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 8.2e-37 Identity = 82/99 (82.83%), Postives = 88/99 (88.89%), Query Frame = 0
BLAST of CmaCh08G010160 vs. NCBI nr
Match: XP_023000434.1 (uncharacterized protein LOC111494701 [Cucurbita maxima]) HSP 1 Score: 193.0 bits (489), Expect = 1.2e-45 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of CmaCh08G010160 vs. NCBI nr
Match: XP_022964268.1 (uncharacterized protein LOC111464337 [Cucurbita moschata] >KAG6593775.1 FCS-Like Zinc finger 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026107.1 hypothetical protein SDJN02_12606 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 191.8 bits (486), Expect = 2.6e-45 Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0
BLAST of CmaCh08G010160 vs. NCBI nr
Match: XP_023514784.1 (uncharacterized protein LOC111778993 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 189.5 bits (480), Expect = 1.3e-44 Identity = 91/93 (97.85%), Postives = 92/93 (98.92%), Query Frame = 0
BLAST of CmaCh08G010160 vs. NCBI nr
Match: XP_038906621.1 (FCS-Like Zinc finger 3-like [Benincasa hispida]) HSP 1 Score: 172.2 bits (435), Expect = 2.1e-39 Identity = 85/101 (84.16%), Postives = 90/101 (89.11%), Query Frame = 0
BLAST of CmaCh08G010160 vs. NCBI nr
Match: KGN61405.1 (hypothetical protein Csa_006269 [Cucumis sativus]) HSP 1 Score: 171.8 bits (434), Expect = 2.8e-39 Identity = 84/96 (87.50%), Postives = 89/96 (92.71%), Query Frame = 0
BLAST of CmaCh08G010160 vs. TAIR 10
Match: AT5G47060.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 90.9 bits (224), Expect = 5.9e-19 Identity = 38/56 (67.86%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of CmaCh08G010160 vs. TAIR 10
Match: AT2G44670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 88.2 bits (217), Expect = 3.8e-18 Identity = 46/83 (55.42%), Postives = 59/83 (71.08%), Query Frame = 0
BLAST of CmaCh08G010160 vs. TAIR 10
Match: AT4G17670.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 87.0 bits (214), Expect = 8.5e-18 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 0
BLAST of CmaCh08G010160 vs. TAIR 10
Match: AT1G78020.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 66.6 bits (161), Expect = 1.2e-11 Identity = 32/63 (50.79%), Postives = 39/63 (61.90%), Query Frame = 0
BLAST of CmaCh08G010160 vs. TAIR 10
Match: AT5G49120.1 (Protein of unknown function (DUF581) ) HSP 1 Score: 60.8 bits (146), Expect = 6.5e-10 Identity = 33/60 (55.00%), Postives = 40/60 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|