Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTCCTTCTACATTCTTTTTCATTCTTATTCTCAATGGCCGGTCAAGTTCCACGTCCATGGTTTCGTTTGGGCTCTATGACCCGACCAACAACCGCCACAACCACCGCTCCGGTCACCGACCAACCGCGACCTGCTCCCCCTCGGATGCGCCCGCCCTTAATCCGAACCACCTCCTTGACGGAGCTTGCAGAACCCACCACCCCACTCCAATCTGCCAAATCGCCGCCACAGTTACCTCGCCTAGCCCCACTAACCCCTCAGCCTAAAAAGGAAGCGTCGCCACCGCCACCGCCCCCGCCTTTGACCCGACCTGTTGTTACGTCAACTGCAGCCCCAAAACCCAGTAGCCCCAAGGGAAAAAGTCATTCACTTGGAGGGTCTCCGCCGCGCAATGGCTCGTTTGATAAAGAAAGTAACAAACATCCCACCCCAGTTCCGTCTCCTTCTATTCCCAAGTCTATTCCGGCCGTTCCGTCGCCTTATCAGTCGCCGAAGCCGAAGCCTAAAGCCACTGCTTCGCCCCCGTCGCCGCTTGTTTTACCGCCGCCGCAGTTGCAGTTTGTCGCCGAGCCTAGACCTGAGACCATTCTTCAAGAGGTAGTGTTAATTTCCGTTCATTGAGATGGGTGTGTTTTTAGCATTGGCAAACTTTTGAAAATCGAGAGTAAAAATAGTAGGTTTAATCTTGAGGATTGTTGGGAGAGAGTACCACATTAGCTAATTTAGAAAATTATCATGTGTTTATAAGTAAGAAATATATCTTTATTAGTACGAGACATTTTAAAAACCATGAGAACTTATGTTCAAATTCGATAATATCATACTATTGTAGAAAGTAGTGATTAGTATCACATGGTTTCAGAGCTATCCCTTTAACTTAGCAATGTCAATAGAATTCTCAAAGGTCGAACAAAGAAGTTGTGAACCTCGAAGGTGTAGTCAAAAGTGACTAAGTATTGAACAAAGGGTGTACTACTTTCTTAGAAGACTCCAGAGAATGAGTTGAGCCTTGATTAAGGAGAGGTTGTTTCTCGACTCCTTCTCTAGAGTCCTCGAACAAAATACACTCTTTGTTCGAGGGTTCGAGGGAAGGATTAAGGAATAATCATGAGTTTATAAGTAAAGAATAGATCTTCATTGATACGAGATGTTTTAGGATGCTCAAAGTGAACTATATCTTACCATTATAAAGAATCGTGATTTCTAACATAATCGATGAACAGGTAGAACGAAAGACGGTTGTTTTTCAAAAAGTGATGGAGAAGCCTTCACCGCCGGATCACGATATCAATAACTACCATTCCCAAGCATCTGGATTTGGCAAAAATGGGAAGAAACATGATGACAATCAAGACAAGGGAAATGGAGCCAAGAAACCGTTCGTGTCGTCCGGTGATAAAGACTCAAGCACGAGAGTTATAACAATGGCAGGAGAAAACAGAGGAGCTTCCATGGAAGTAGTTCTCTCAGACAAAAACAACAACAGCCGCCATCTTCAAACAAATCAAAGCGACAAGGAAGACACCACCAACGATTCTAAAGACAACAAAAGTAACAAGAAATCAACGGCGTGTAGTAGTGCATGGCCAATGAAAGCTTTCTTTAACAGCAATGTTCAAGGGATTAACAATTCAATTCTGATGGACTCCAAATTCACCCACCACGACCCTGGGATTCATCTTGTCTTCTCCAAGATGCCGCCGCCATCTGCCCATCAGGAACACGGCGGACAATAACCAAGTTGTCTTGTTTCCTTTGATTTGGGTCTCTAAGTTCACTATCATCTGTGTTTATTTCTTTAACTTTATCCATATGTTTCTTTGACAGAATAAAATATGGGAGTTAATTGGGTGTTATAGGGTGAAAATTCTGGTTTGTTAAGGTCTAGAGTAAGGCATATTCAATAAAATGTTATGACTTTTGTTTATATATAGATACTAAGTAAAAATGTTCGCA
mRNA sequence
TTCCTTCTACATTCTTTTTCATTCTTATTCTCAATGGCCGGTCAAGTTCCACGTCCATGGTTTCGTTTGGGCTCTATGACCCGACCAACAACCGCCACAACCACCGCTCCGGTCACCGACCAACCGCGACCTGCTCCCCCTCGGATGCGCCCGCCCTTAATCCGAACCACCTCCTTGACGGAGCTTGCAGAACCCACCACCCCACTCCAATCTGCCAAATCGCCGCCACAGTTACCTCGCCTAGCCCCACTAACCCCTCAGCCTAAAAAGGAAGCGTCGCCACCGCCACCGCCCCCGCCTTTGACCCGACCTGTTGTTACGTCAACTGCAGCCCCAAAACCCAGTAGCCCCAAGGGAAAAAGTCATTCACTTGGAGGGTCTCCGCCGCGCAATGGCTCGTTTGATAAAGAAAGTAACAAACATCCCACCCCAGTTCCGTCTCCTTCTATTCCCAAGTCTATTCCGGCCGTTCCGTCGCCTTATCAGTCGCCGAAGCCGAAGCCTAAAGCCACTGCTTCGCCCCCGTCGCCGCTTGTTTTACCGCCGCCGCAGTTGCAGTTTGTCGCCGAGCCTAGACCTGAGACCATTCTTCAAGAGGTAGAACGAAAGACGGTTGTTTTTCAAAAAGTGATGGAGAAGCCTTCACCGCCGGATCACGATATCAATAACTACCATTCCCAAGCATCTGGATTTGGCAAAAATGGGAAGAAACATGATGACAATCAAGACAAGGGAAATGGAGCCAAGAAACCGTTCGTGTCGTCCGGTGATAAAGACTCAAGCACGAGAGTTATAACAATGGCAGGAGAAAACAGAGGAGCTTCCATGGAAGTAGTTCTCTCAGACAAAAACAACAACAGCCGCCATCTTCAAACAAATCAAAGCGACAAGGAAGACACCACCAACGATTCTAAAGACAACAAAAGTAACAAGAAATCAACGGCGTGTAGTAGTGCATGGCCAATGAAAGCTTTCTTTAACAGCAATGTTCAAGGGATTAACAATTCAATTCTGATGGACTCCAAATTCACCCACCACGACCCTGGGATTCATCTTGTCTTCTCCAAGATGCCGCCGCCATCTGCCCATCAGGAACACGGCGGACAATAACCAAGTTGTCTTGTTTCCTTTGATTTGGGTCTCTAAGTTCACTATCATCTGTGTTTATTTCTTTAACTTTATCCATATGTTTCTTTGACAGAATAAAATATGGGAGTTAATTGGGTGTTATAGGGTGAAAATTCTGGTTTGTTAAGGTCTAGAGTAAGGCATATTCAATAAAATGTTATGACTTTTGTTTATATATAGATACTAAGTAAAAATGTTCGCA
Coding sequence (CDS)
ATGGCCGGTCAAGTTCCACGTCCATGGTTTCGTTTGGGCTCTATGACCCGACCAACAACCGCCACAACCACCGCTCCGGTCACCGACCAACCGCGACCTGCTCCCCCTCGGATGCGCCCGCCCTTAATCCGAACCACCTCCTTGACGGAGCTTGCAGAACCCACCACCCCACTCCAATCTGCCAAATCGCCGCCACAGTTACCTCGCCTAGCCCCACTAACCCCTCAGCCTAAAAAGGAAGCGTCGCCACCGCCACCGCCCCCGCCTTTGACCCGACCTGTTGTTACGTCAACTGCAGCCCCAAAACCCAGTAGCCCCAAGGGAAAAAGTCATTCACTTGGAGGGTCTCCGCCGCGCAATGGCTCGTTTGATAAAGAAAGTAACAAACATCCCACCCCAGTTCCGTCTCCTTCTATTCCCAAGTCTATTCCGGCCGTTCCGTCGCCTTATCAGTCGCCGAAGCCGAAGCCTAAAGCCACTGCTTCGCCCCCGTCGCCGCTTGTTTTACCGCCGCCGCAGTTGCAGTTTGTCGCCGAGCCTAGACCTGAGACCATTCTTCAAGAGGTAGAACGAAAGACGGTTGTTTTTCAAAAAGTGATGGAGAAGCCTTCACCGCCGGATCACGATATCAATAACTACCATTCCCAAGCATCTGGATTTGGCAAAAATGGGAAGAAACATGATGACAATCAAGACAAGGGAAATGGAGCCAAGAAACCGTTCGTGTCGTCCGGTGATAAAGACTCAAGCACGAGAGTTATAACAATGGCAGGAGAAAACAGAGGAGCTTCCATGGAAGTAGTTCTCTCAGACAAAAACAACAACAGCCGCCATCTTCAAACAAATCAAAGCGACAAGGAAGACACCACCAACGATTCTAAAGACAACAAAAGTAACAAGAAATCAACGGCGTGTAGTAGTGCATGGCCAATGAAAGCTTTCTTTAACAGCAATGTTCAAGGGATTAACAATTCAATTCTGATGGACTCCAAATTCACCCACCACGACCCTGGGATTCATCTTGTCTTCTCCAAGATGCCGCCGCCATCTGCCCATCAGGAACACGGCGGACAATAA
Protein sequence
MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQSAKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKKHDDNQDKGNGAKKPFVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEDTTNDSKDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEHGGQ
Homology
BLAST of CmaCh08G008560 vs. ExPASy TrEMBL
Match:
A0A6J1KIF7 (extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111494246 PE=4 SV=1)
HSP 1 Score: 678.7 bits (1750), Expect = 1.3e-191
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0
Query: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS 60
MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS
Sbjct: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS 60
Query: 61 AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN 120
AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN
Sbjct: 61 AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN 120
Query: 121 GSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP 180
GSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP
Sbjct: 121 GSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP 180
Query: 181 RPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKKHDDNQDKGNGAKKP 240
RPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKKHDDNQDKGNGAKKP
Sbjct: 181 RPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKKHDDNQDKGNGAKKP 240
Query: 241 FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEDTTNDSKDNKSNK 300
FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEDTTNDSKDNKSNK
Sbjct: 241 FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEDTTNDSKDNKSNK 300
Query: 301 KSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEHGGQ 359
KSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEHGGQ
Sbjct: 301 KSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEHGGQ 358
BLAST of CmaCh08G008560 vs. ExPASy TrEMBL
Match:
A0A6J1HKY3 (extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111464501 PE=4 SV=1)
HSP 1 Score: 652.5 bits (1682), Expect = 1.0e-183
Identity = 346/358 (96.65%), Postives = 349/358 (97.49%), Query Frame = 0
Query: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS 60
MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRP PPR+RPPLIRT+SLTELAEPTTP QS
Sbjct: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPVPPRIRPPLIRTSSLTELAEPTTPQQS 60
Query: 61 AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN 120
AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN
Sbjct: 61 AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN 120
Query: 121 GSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP 180
GSFDKESNKHPTP PSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP
Sbjct: 121 GSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP 180
Query: 181 RPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKKHDDNQDKGNGAKKP 240
RPETI QEVERKTVVFQKVMEKPSPPDHDINNY+SQASGFGKNGKKHDDNQDKGNGAKKP
Sbjct: 181 RPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGKNGKKHDDNQDKGNGAKKP 240
Query: 241 FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEDTTNDSKDNKSNK 300
FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ NQSD DTTNDSKDNKSNK
Sbjct: 241 FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQINQSDNGDTTNDSKDNKSNK 300
Query: 301 KSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEHGGQ 359
KSTAC SAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQE GGQ
Sbjct: 301 KSTACRSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEDGGQ 358
BLAST of CmaCh08G008560 vs. ExPASy TrEMBL
Match:
A0A6J1H2W2 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111459978 PE=4 SV=1)
HSP 1 Score: 358.2 bits (918), Expect = 3.9e-95
Identity = 228/369 (61.79%), Postives = 266/369 (72.09%), Query Frame = 0
Query: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPT----- 60
MAGQ+PRPWFRLGS+TRPTT TT TDQPRP P R+RPP+IRT S TE AEPT
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
Query: 61 -----TPLQSAKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKS 120
TP++ A SPPQLP LTP KK AS PP +TRP + S A K SPKGKS
Sbjct: 61 KSPPQTPMKKAASPPQLPLPGSLTPPVKKPAS--PPAAAVTRPALPSPA--KHISPKGKS 120
Query: 121 HSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLP 180
S+ GSP +N +K+S+K +PV SP +PKSIPAVP+PYQS PKPKA ASPPSPL LP
Sbjct: 121 GSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQS--PKPKAAASPPSPLTLP 180
Query: 181 PPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKK---- 240
PPQLQ V EP+ E+I QEVERKTVVFQKVM+K S +HDI +YH+ A+ FG+NGK+
Sbjct: 181 PPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKK 240
Query: 241 --HDDNQDKGNGAKKPFV-SSGDKD--SSTRVITMAGENRGASMEVVLSDKNNNSRHLQT 300
D+++DK GAKK + SS DKD ++TRVITMAG+N GASME+ LSDKN N
Sbjct: 241 SDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKNKNK----- 300
Query: 301 NQSDKEDTTNDS-KDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 350
EDTTN++ KDNKS KK+ + PMKAFFNSNVQGINNSILMDSKFTHHDPGIH
Sbjct: 301 ----NEDTTNNNLKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 354
BLAST of CmaCh08G008560 vs. ExPASy TrEMBL
Match:
A0A6J1KY68 (serine/arginine repetitive matrix protein 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499277 PE=4 SV=1)
HSP 1 Score: 349.7 bits (896), Expect = 1.4e-92
Identity = 224/372 (60.22%), Postives = 260/372 (69.89%), Query Frame = 0
Query: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS 60
MA Q+PRPWFRLGS+TRPTT TT P TDQPRP P R+RPP+IRT S TE AEPTTP QS
Sbjct: 1 MAAQLPRPWFRLGSLTRPTTGATTGPGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQQS 60
Query: 61 ----------AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPS---SPK 120
A SPPQLP LTP KK ASPP VT A P P+ SPK
Sbjct: 61 KSPPQTPMKKAASPPQLPLPGSLTPPVKKAASPP-------AAAVTIPALPSPAKHISPK 120
Query: 121 GKSHSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPL 180
GKS S+ GSP +N +K+S K +PV SP +PKSIPAVP+PYQS PKPK ASPPSPL
Sbjct: 121 GKSGSVVGSPTKNELVNKDSRKQASPVSSPLVPKSIPAVPTPYQS--PKPKTAASPPSPL 180
Query: 181 VLPPPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKK- 240
LPPPQLQ V EP+ ETI Q VERKTVVFQKV++K S +HDI +YH++A+ FG+NGK+
Sbjct: 181 TLPPPQLQSVDEPKHETIPQAVERKTVVFQKVIDKASQAEHDIASYHTRAAEFGQNGKQE 240
Query: 241 -----HDDNQDKGNGAKKPFV-SSGDKD--SSTRVITMAGENRGASMEVVLSDKNNNSRH 300
D+++DK GA K + SS DKD ++T+VITMAG+N GA ME+ LSDKN N
Sbjct: 241 PKKSDEDESKDKAIGATKALLESSNDKDTNTNTKVITMAGKNNGAFMEIFLSDKNKNK-- 300
Query: 301 LQTNQSDKEDTTNDS-KDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDP 350
EDTTN++ KDNKS KK+ + PMKAFFNSNVQGINNSILMDSKFTHHDP
Sbjct: 301 -------NEDTTNNNLKDNKSTKKTIRTRNGVPMKAFFNSNVQGINNSILMDSKFTHHDP 354
BLAST of CmaCh08G008560 vs. ExPASy TrEMBL
Match:
A0A6J1H458 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111459978 PE=4 SV=1)
HSP 1 Score: 342.0 bits (876), Expect = 2.9e-90
Identity = 218/369 (59.08%), Postives = 256/369 (69.38%), Query Frame = 0
Query: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPT----- 60
MAGQ+PRPWFRLGS+TRPTT TT TDQPRP P R+RPP+IRT S TE AEPT
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
Query: 61 -----TPLQSAKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKS 120
TP++ A SPPQLP LTP KK ASPP + A +P+ P
Sbjct: 61 KSPPQTPMKKAASPPQLPLPGSLTPPVKKPASPP------------AAAVTRPALPSPAK 120
Query: 121 HSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLP 180
H SP +N +K+S+K +PV SP +PKSIPAVP+PYQS PKPKA ASPPSPL LP
Sbjct: 121 HI---SPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQS--PKPKAAASPPSPLTLP 180
Query: 181 PPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKK---- 240
PPQLQ V EP+ E+I QEVERKTVVFQKVM+K S +HDI +YH+ A+ FG+NGK+
Sbjct: 181 PPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKK 240
Query: 241 --HDDNQDKGNGAKKPFV-SSGDKD--SSTRVITMAGENRGASMEVVLSDKNNNSRHLQT 300
D+++DK GAKK + SS DKD ++TRVITMAG+N GASME+ LSDKN N
Sbjct: 241 SDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKNKNK----- 300
Query: 301 NQSDKEDTTNDS-KDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 350
EDTTN++ KDNKS KK+ + PMKAFFNSNVQGINNSILMDSKFTHHDPGIH
Sbjct: 301 ----NEDTTNNNLKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 343
BLAST of CmaCh08G008560 vs. NCBI nr
Match:
XP_022999909.1 (extensin-like [Cucurbita maxima])
HSP 1 Score: 678.7 bits (1750), Expect = 2.7e-191
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 0
Query: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS 60
MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS
Sbjct: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS 60
Query: 61 AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN 120
AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN
Sbjct: 61 AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN 120
Query: 121 GSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP 180
GSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP
Sbjct: 121 GSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP 180
Query: 181 RPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKKHDDNQDKGNGAKKP 240
RPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKKHDDNQDKGNGAKKP
Sbjct: 181 RPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKKHDDNQDKGNGAKKP 240
Query: 241 FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEDTTNDSKDNKSNK 300
FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEDTTNDSKDNKSNK
Sbjct: 241 FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEDTTNDSKDNKSNK 300
Query: 301 KSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEHGGQ 359
KSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEHGGQ
Sbjct: 301 KSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEHGGQ 358
BLAST of CmaCh08G008560 vs. NCBI nr
Match:
XP_023513718.1 (proline-rich receptor-like protein kinase PERK8 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 654.1 bits (1686), Expect = 7.2e-184
Identity = 348/358 (97.21%), Postives = 350/358 (97.77%), Query Frame = 0
Query: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS 60
MAGQVPRPWFRLGSMTRPTTATTTAP TDQPRPAPPRMRPPLIRTTSLTELAEPTTP QS
Sbjct: 1 MAGQVPRPWFRLGSMTRPTTATTTAPPTDQPRPAPPRMRPPLIRTTSLTELAEPTTPQQS 60
Query: 61 AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN 120
AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN
Sbjct: 61 AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN 120
Query: 121 GSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP 180
GSFDKESNKHPTP PSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP
Sbjct: 121 GSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP 180
Query: 181 RPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKKHDDNQDKGNGAKKP 240
RPETI QEVERKTVVFQKVMEKPSPPDHDINNY+SQASGFGKNGKKHDDNQDKGNGAKKP
Sbjct: 181 RPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGKNGKKHDDNQDKGNGAKKP 240
Query: 241 FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEDTTNDSKDNKSNK 300
FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKE+TTNDSKDNKSNK
Sbjct: 241 FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEETTNDSKDNKSNK 300
Query: 301 KSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEHGGQ 359
KSTA AWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQE GGQ
Sbjct: 301 KSTAGRGAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEDGGQ 358
BLAST of CmaCh08G008560 vs. NCBI nr
Match:
XP_022964490.1 (extensin-like [Cucurbita moschata] >KAG6593605.1 hypothetical protein SDJN03_13081, partial [Cucurbita argyrosperma subsp. sororia] >KAG7025952.1 hypothetical protein SDJN02_12450, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 652.5 bits (1682), Expect = 2.1e-183
Identity = 346/358 (96.65%), Postives = 349/358 (97.49%), Query Frame = 0
Query: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPTTPLQS 60
MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRP PPR+RPPLIRT+SLTELAEPTTP QS
Sbjct: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPVPPRIRPPLIRTSSLTELAEPTTPQQS 60
Query: 61 AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN 120
AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN
Sbjct: 61 AKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKSHSLGGSPPRN 120
Query: 121 GSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP 180
GSFDKESNKHPTP PSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP
Sbjct: 121 GSFDKESNKHPTPAPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLPPPQLQFVAEP 180
Query: 181 RPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKKHDDNQDKGNGAKKP 240
RPETI QEVERKTVVFQKVMEKPSPPDHDINNY+SQASGFGKNGKKHDDNQDKGNGAKKP
Sbjct: 181 RPETIPQEVERKTVVFQKVMEKPSPPDHDINNYNSQASGFGKNGKKHDDNQDKGNGAKKP 240
Query: 241 FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQTNQSDKEDTTNDSKDNKSNK 300
FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQ NQSD DTTNDSKDNKSNK
Sbjct: 241 FVSSGDKDSSTRVITMAGENRGASMEVVLSDKNNNSRHLQINQSDNGDTTNDSKDNKSNK 300
Query: 301 KSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEHGGQ 359
KSTAC SAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQE GGQ
Sbjct: 301 KSTACRSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIHLVFSKMPPPSAHQEDGGQ 358
BLAST of CmaCh08G008560 vs. NCBI nr
Match:
KAG7013807.1 (hypothetical protein SDJN02_23974, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 358.2 bits (918), Expect = 8.1e-95
Identity = 228/369 (61.79%), Postives = 266/369 (72.09%), Query Frame = 0
Query: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPT----- 60
MAGQ+PRPWFRLGS+TRPTT TT TDQPRP P R+RPP+IRT S TE AEPT
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
Query: 61 -----TPLQSAKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKS 120
TP++ A SPPQLP LTP KK AS PP +TRP + S A K SPKGKS
Sbjct: 61 KSPPQTPMKKAASPPQLPLPGSLTPPVKKPAS--PPAAAVTRPALPSPA--KHISPKGKS 120
Query: 121 HSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLP 180
S+ GSP +N +K+S+K +PV SP +PKSIPAVP+PYQS PKPKA ASPPSPL LP
Sbjct: 121 GSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQS--PKPKAAASPPSPLTLP 180
Query: 181 PPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKK---- 240
PPQLQ V EP+ E+I QEVERKTVVFQKVM+K S +HDI +YH+ A+ FG+NGK+
Sbjct: 181 PPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKK 240
Query: 241 --HDDNQDKGNGAKKPFV-SSGDKD--SSTRVITMAGENRGASMEVVLSDKNNNSRHLQT 300
D+++DK GAKK + SS DKD ++TRVITMAG+N GASME+ LSDKN N
Sbjct: 241 SDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKNKNK----- 300
Query: 301 NQSDKEDTTNDS-KDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 350
EDTTN++ KDNKS KK+ + PMKAFFNSNVQGINNSILMDSKFTHHDPGIH
Sbjct: 301 ----NEDTTNNNLKDNKSTKKTIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 354
BLAST of CmaCh08G008560 vs. NCBI nr
Match:
XP_022958822.1 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucurbita moschata])
HSP 1 Score: 358.2 bits (918), Expect = 8.1e-95
Identity = 228/369 (61.79%), Postives = 266/369 (72.09%), Query Frame = 0
Query: 1 MAGQVPRPWFRLGSMTRPTTATTTAPVTDQPRPAPPRMRPPLIRTTSLTELAEPT----- 60
MAGQ+PRPWFRLGS+TRPTT TT TDQPRP P R+RPP+IRT S TE AEPT
Sbjct: 1 MAGQLPRPWFRLGSLTRPTTGATTGSGTDQPRPVPARIRPPVIRTASFTEPAEPTTPQPS 60
Query: 61 -----TPLQSAKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVVTSTAAPKPSSPKGKS 120
TP++ A SPPQLP LTP KK AS PP +TRP + S A K SPKGKS
Sbjct: 61 KSPPQTPMKKAASPPQLPLPGSLTPPVKKPAS--PPAAAVTRPALPSPA--KHISPKGKS 120
Query: 121 HSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQSPKPKPKATASPPSPLVLP 180
S+ GSP +N +K+S+K +PV SP +PKSIPAVP+PYQS PKPKA ASPPSPL LP
Sbjct: 121 GSVVGSPTKNELVNKDSSKQASPVSSPLVPKSIPAVPTPYQS--PKPKAAASPPSPLTLP 180
Query: 181 PPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYHSQASGFGKNGKK---- 240
PPQLQ V EP+ E+I QEVERKTVVFQKVM+K S +HDI +YH+ A+ FG+NGK+
Sbjct: 181 PPQLQSVDEPKHESIPQEVERKTVVFQKVMDKASQGEHDITSYHTHAAEFGQNGKQEPKK 240
Query: 241 --HDDNQDKGNGAKKPFV-SSGDKD--SSTRVITMAGENRGASMEVVLSDKNNNSRHLQT 300
D+++DK GAKK + SS DKD ++TRVITMAG+N GASME+ LSDKN N
Sbjct: 241 SDEDESKDKAIGAKKALLESSNDKDTNTNTRVITMAGKNNGASMEIFLSDKNKNK----- 300
Query: 301 NQSDKEDTTNDS-KDNKSNKKSTACSSAWPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 350
EDTTN++ KDNKS KK+ + PMKAFFNSNVQGINNSILMDSKFTHHDPGIH
Sbjct: 301 ----NEDTTNNNLKDNKSTKKAIRTRNGLPMKAFFNSNVQGINNSILMDSKFTHHDPGIH 354
BLAST of CmaCh08G008560 vs. TAIR 10
Match:
AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). )
HSP 1 Score: 90.9 bits (224), Expect = 2.3e-18
Identity = 128/395 (32.41%), Postives = 171/395 (43.29%), Query Frame = 0
Query: 7 RPWFRLGSMTRPTTATTTAPVTDQPR---------------PAPPRMR------------ 66
RPWFRL S+ RPT ++ P QPR P+PPR R
Sbjct: 5 RPWFRLSSIARPTAQGSSDPPPPQPRPTSRSSLVVRPPAKQPSPPRQRQPRSPPRQQDPP 64
Query: 67 -PPLIRTTSLT---ELAEPTTPLQSAKSPPQLPRLAPLTPQPKKEASPPPPPPPLTRPVV 126
PP + LT + A PT+P Q +SP P ++P +A+ PPPPPP R
Sbjct: 65 SPPRQQQQPLTPPRQKAPPTSPPQE-RSPYHSPPSRHMSPPTPPKAATPPPPPP--RSSY 124
Query: 127 TSTAAPKPSSPKGKSHSLGGSPPRNGSFDKESNKHPTPV-PSPSIPKSIPAVPSPYQSPK 186
TS P SPK +L PPR + N P+P S S SP +S
Sbjct: 125 TS-----PPSPKEVQEAL---PPR------KPNSPPSPAHSSRSTTSESVKTRSPSESEN 184
Query: 187 PKPKATASPPSPLVLPPPQLQFVAEPRPETILQEVERKTVVFQKVMEKPSPPDHDINNYH 246
+ + SP LP L E + IL KT + +HD N H
Sbjct: 185 HRKAPSPRVLSPYSLPASLLHSERETTQKNIL--TAEKTSQTHETNHHNQNHNHDYNQNH 244
Query: 247 SQASGFGKNGKKHDDNQDKGNGAKK----PFVSSGDKDSSTRVITMAGENRGASMEVVLS 306
+ + +N + + +GN KK P S + STRVIT+AGEN+GA ME++ S
Sbjct: 245 N----YNQNHSYNQNQNHQGNNPKKMHRQPSSSDSENIMSTRVITIAGENKGAVMEILRS 304
Query: 307 DKNNNS------------------RHLQTNQSDKEDTTNDSKDNKSNKKSTACSSAWPMK 348
+ N + R LQ++ S D K N + +S PMK
Sbjct: 305 PQGNKTGGSGTHSSRVSHGTGEKGRRLQSSSSSSSDEGEGKKKTTKNVPNKG-NSNLPMK 364
BLAST of CmaCh08G008560 vs. TAIR 10
Match:
AT1G44191.1 (ECA1 gametogenesis related family protein )
HSP 1 Score: 48.1 bits (113), Expect = 1.7e-05
Identity = 64/178 (35.96%), Postives = 80/178 (44.94%), Query Frame = 0
Query: 33 PAPPRMRPPLIRTTSLTELAEPTTPLQSAKSPPQLPRLAPLTPQPKKEASPPPPPPPLTR 92
P PP +PP T + P +PL KSPP P+ +P PKK SPPPP P
Sbjct: 77 PHPPSPKPP-------TPSSRPPSPLSPKKSPPS-PKPSPPPRTPKK--SPPPPKPSSPP 136
Query: 93 PV-VTSTAAPKPSSPKGKSHSLGGSPPRNGSFDKESNKHPTPVPSPSIPKSIPAVPSPYQ 152
P+ S PKPSSP P + P P PSPS PK P+P +
Sbjct: 137 PIPKKSPPPPKPSSPPPTPKKSPPPPKPSSPPPSPKKSPPPPKPSPSPPKPSTPPPTPKK 196
Query: 153 SPKPKPKATASPPSPLVLPPPQLQFVAEPRPETILQEVERKTVVFQKVME---KPSPP 207
SP PK ++ PPSP PPP + P+P T +K+ K + KPSPP
Sbjct: 197 SPPSPPKPSSPPPSPKKSPPPPKPSPSPPKPST-PPPTPKKSPPPPKPSQPPPKPSPP 243
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1KIF7 | 1.3e-191 | 100.00 | extensin-like OS=Cucurbita maxima OX=3661 GN=LOC111494246 PE=4 SV=1 | [more] |
A0A6J1HKY3 | 1.0e-183 | 96.65 | extensin-like OS=Cucurbita moschata OX=3662 GN=LOC111464501 PE=4 SV=1 | [more] |
A0A6J1H2W2 | 3.9e-95 | 61.79 | pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucurb... | [more] |
A0A6J1KY68 | 1.4e-92 | 60.22 | serine/arginine repetitive matrix protein 1 isoform X1 OS=Cucurbita maxima OX=36... | [more] |
A0A6J1H458 | 2.9e-90 | 59.08 | pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucurb... | [more] |
Match Name | E-value | Identity | Description | |
XP_022999909.1 | 2.7e-191 | 100.00 | extensin-like [Cucurbita maxima] | [more] |
XP_023513718.1 | 7.2e-184 | 97.21 | proline-rich receptor-like protein kinase PERK8 [Cucurbita pepo subsp. pepo] | [more] |
XP_022964490.1 | 2.1e-183 | 96.65 | extensin-like [Cucurbita moschata] >KAG6593605.1 hypothetical protein SDJN03_130... | [more] |
KAG7013807.1 | 8.1e-95 | 61.79 | hypothetical protein SDJN02_23974, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_022958822.1 | 8.1e-95 | 61.79 | pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucurbit... | [more] |
Match Name | E-value | Identity | Description | |
AT2G46630.1 | 2.3e-18 | 32.41 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXP... | [more] |
AT1G44191.1 | 1.7e-05 | 35.96 | ECA1 gametogenesis related family protein | [more] |