CmaCh08G006620 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G006620
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	50S ribosomal protein L2, chloroplastic
Location	Cma_Chr08: 4010114 .. 4011427 (-)
RNA-Seq Expression	CmaCh08G006620
Synteny	CmaCh08G006620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGCATCGTCGTGGTAAAGGTCGTAATGCCAGAGGGAGGGAGGAATCAATCAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTGGAATGAAAAAGACATATATGGTAGAATCGTAACCATAGAATACGACCCTAATCGAGATGCATACATTTGTCTCATACACTATGGGTATGGTGGGAAAAAATATATTTGACATCCCAGAGGGGCTATAATTGGAGATACCATTGTTTCTTGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCCGTTTGAACTATTGATTTACGTAATTGGAAGTAACCAATTAGGTTTACGAAGAAACCTCGAAATCAATCACTGATCCAATTTGAGTACCTCCACAGGATAGACCACAACAGAAAACTGAAGAGTAACGGCAGCAAGTGATTGAGTTCAGTAGTTCCTCATATCAAATTATTGACTCTAGAGATATAGTAATATGGAGAAGACTAAATTGTTTCAAGCACCGATAGAACCAGAAGCGTCCCTTGTTTCAAAGAGAGGAGGATGGGTTATTAACATTGAATTTGATGGTCAGAGGCAAATTGAAAGCTAAGCAGTGGTAATTCTAAGGATTCCTGAGGGGAAAAATAGAGATGTCTCCTACGTTACCCGTAATATGTGGAAGTATCGACGTAATTTCATAGAGTCATTCGGTCTGAATGCTACATGAAGAACATAAGCTAGATGAAGGAACGGGAAGACCTAGGATGTAGAAGATCATAACATGAGTGATTCGGCGGATTTGGATTCCTATATATCCACTCATGTGGTACTTCATTGGACGATATATATAAGATCCATATGTATAGATATCATCATCTACATCTAGAAAGCCGTATGCTTTGGAAGAAGCTTGTACAGCTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGCCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGAAAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTACTCAGCAACAGTCAGACAAGTGGGGCTGGGGTAAACCATAAAAGTTTGGGTAGAGGCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAATAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGCGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAACCCGTAA

mRNA sequence

ATGGATAGCATCGTCGTGGTAAAGGTCGTAATGCCAGAGGGAGGGAGGAATCAATCAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTGGAATGAAAAAGACATATATGGTAGAATCAGGGGCTATAATTGGAGATACCATTGTTTCTTGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCCCCGTATGCTTTGGAAGAAGCTTGTACAGCTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGCCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGAAAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTACTCAGCAACAACAAGTGGGGCTGGGGTAAACCATAAAAGTTTGGGTAGAGGCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAATAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGCGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAACCCGTAA

Coding sequence (CDS)

ATGGATAGCATCGTCGTGGTAAAGGTCGTAATGCCAGAGGGAGGGAGGAATCAATCAATCATTACCGCAGGGCATAGAGGGGGAGGTCATAAGCGTCTATACCGTAAAATCGATTTTGGAATGAAAAAGACATATATGGTAGAATCAGGGGCTATAATTGGAGATACCATTGTTTCTTGTACAGAAGTTCCTATAAAAATGGGAAATGCCCTACCTTTGAGTGCCCCGTATGCTTTGGAAGAAGCTTGTACAGCTTGGGAAGGGGTTTTGATTGATCAAAAAGAAGAATCTACTTCAACCGATATGCCCTTAGCCACGGCCATACATAACATAGAAATCACACTTGGGAAGGGGGGACAATTAGCTAGAGCAGCAGGTGCTGTAGCGAAACTGATTGCAAAAGAGGAAAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGATATCCAAAAATTACTCAGCAACAACAAGTGGGGCTGGGGTAAACCATAAAAGTTTGGGTAGAGGCGGATCTAAATGTTGGCTAGGTAAGCGTCCTGTAATAAGAGGAGTAGTTATGAACCCTGTAGACCATCCCCATGGCGGTGGTGAAGGGAGGGCCCCAATTGGTAGAAAAAACCCGTAA

Protein sequence

MDSIVVVKVVMPEGGRNQSIITAGHRGGGHKRLYRKIDFGMKKTYMVESGAIIGDTIVSCTEVPIKMGNALPLSAPYALEEACTAWEGVLIDQKEESTSTDMPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISKNYSATTSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP

Homology

[Close]

BLAST of CmaCh08G006620 vs. ExPASy Swiss-Prot
Match: Q4VZK5 (50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.8e-66
Identity = 149/231 (64.50%), Postives = 153/231 (66.23%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSAPYALEEACTAWEGVLIDQKEESTSTDM 134
           +  +   GAIIGDTIVS TEVPIKMGNALPL                          TDM
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPL--------------------------TDM 159

Query: 135 PLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISKNYSAT---T 194
           PL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISKN SAT    
Sbjct: 160 PLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV 219

Query: 195 SGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
             AGVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 GNAGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 244

[Close]

BLAST of CmaCh08G006620 vs. ExPASy Swiss-Prot
Match: P18663 (50S ribosomal protein L2-A, chloroplastic OS=Glycine max OX=3847 GN=rpl2-A PE=3 SV=2)

HSP 1 Score: 251.5 bits (641), Expect = 8.2e-66
Identity = 148/231 (64.07%), Postives = 152/231 (65.80%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKNIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSAPYALEEACTAWEGVLIDQKEESTSTDM 134
           K  +   GAIIGDTIVS TEVPIKMGNALPL                          TDM
Sbjct: 100 KYILHPRGAIIGDTIVSGTEVPIKMGNALPL--------------------------TDM 159

Query: 135 PLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISKNYSAT---T 194
           PL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISKN SAT    
Sbjct: 160 PLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV 219

Query: 195 SGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
              GVN K+LGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 GNVGVNQKNLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 244

[Close]

BLAST of CmaCh08G006620 vs. ExPASy Swiss-Prot
Match: Q0ZIX7 (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 8.2e-66
Identity = 148/231 (64.07%), Postives = 152/231 (65.80%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSAPYALEEACTAWEGVLIDQKEESTSTDM 134
           +  +   GAIIGDTIVS TEVPIKMGNALPL                          TDM
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPL--------------------------TDM 159

Query: 135 PLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISKNYSAT---T 194
           PL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISKN SAT    
Sbjct: 160 PLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV 219

Query: 195 SGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
              GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 GNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 244

[Close]

BLAST of CmaCh08G006620 vs. ExPASy Swiss-Prot
Match: A6MMG4 (50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus OX=13006 GN=rpl2-A PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-65
Identity = 147/231 (63.64%), Postives = 153/231 (66.23%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDISGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSAPYALEEACTAWEGVLIDQKEESTSTDM 134
           +  +   GAIIGDTIVS TEVPI MGNALPLSA                        TDM
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPISMGNALPLSA------------------------TDM 159

Query: 135 PLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISKNYSAT---T 194
           PL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATL+LPSGEVRLISKN SAT    
Sbjct: 160 PLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLRLPSGEVRLISKNCSATVGQV 219

Query: 195 SGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
              GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGR+PIGRK P
Sbjct: 220 GNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRSPIGRKKP 246

[Close]

BLAST of CmaCh08G006620 vs. ExPASy Swiss-Prot
Match: Q2PMM3 (50S ribosomal protein L2-B, chloroplastic OS=Glycine max OX=3847 GN=rpl2-B PE=3 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-65
Identity = 148/231 (64.07%), Postives = 152/231 (65.80%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKNIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSAPYALEEACTAWEGVLIDQKEESTSTDM 134
           K  +   GAIIGDTIVS TEVPIKMGNALPLS                          DM
Sbjct: 100 KYILHPRGAIIGDTIVSGTEVPIKMGNALPLS--------------------------DM 159

Query: 135 PLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISKNYSAT---T 194
           PL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISKN SAT    
Sbjct: 160 PLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV 219

Query: 195 SGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
              GVN K+LGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 GNVGVNQKNLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 244

[Close]

BLAST of CmaCh08G006620 vs. ExPASy TrEMBL
Match: A0A5A7VC43 (Ribosomal protein L2 (Chloroplast) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44445G00010 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.5e-86
Identity = 172/205 (83.90%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDFGMKKTYMVESGAIIGDTIVSCTEVPIKMGNALPL 74
           GRN + IITAGHRGGGHKRLYR I FGMKKTYMVESGAIIGDTI+S TEVPIKMGNALP+
Sbjct: 36  GRNARGIITAGHRGGGHKRLYRPISFGMKKTYMVESGAIIGDTILSGTEVPIKMGNALPI 95

Query: 75  SA-----PYALEEACTAWEGVLIDQKEESTSTDMPLATAIHNIEITLGKGGQLARAAGAV 134
           S+     PYALEEACT WEGVLI++KEESTSTDMPL TAIHNIEITLGKGGQLARAAGAV
Sbjct: 96  SSSTSRKPYALEEACTVWEGVLIEKKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAV 155

Query: 135 AKLIAKEEKSATLKLPSGEVRLISKNYSAT---TSGAGVNHKSLGRGGSKCWLGKRPVIR 194
           AK IAKE KSAT KLPSGEVRLISKN SAT      AGVN KSLGR GS+CWLGKRPV+R
Sbjct: 156 AKRIAKEGKSATFKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSQCWLGKRPVVR 215

Query: 195 GVVMNPVDHPHGGGEGRAPIGRKNP 211
           GVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 216 GVVMNPVDHPHGGGEGRAPIGRKKP 240

[Close]

BLAST of CmaCh08G006620 vs. ExPASy TrEMBL
Match: A0A438GGK8 (50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A_1 PE=3 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80
Identity = 173/239 (72.38%), Postives = 177/239 (74.06%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSA--------PYALEEACTAWEGVLIDQK 134
           +  +   GAIIGDTIVS TEVPIKMGNALPLSA        PYALEEACT WEGVLIDQK
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQK 159

Query: 135 EESTSTDMPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISKN 194
           EESTSTDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISKN
Sbjct: 160 EESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKN 219

Query: 195 YSAT---TSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
            SAT       GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 CSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 278

[Close]

BLAST of CmaCh08G006620 vs. ExPASy TrEMBL
Match: A0A7T7D7D8 (Ribosomal protein L2 OS=Ammopiptanthus nanus OX=111851 GN=rpl2 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.7e-80
Identity = 173/240 (72.08%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSA---------PYALEEACTAWEGVLIDQ 134
           +  +   GAIIGDTIVS TEVPIKMGNALPLSA         PYALEEACT WEGVLIDQ
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAVISSSTSRKPYALEEACTVWEGVLIDQ 159

Query: 135 KEESTSTDMPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISK 194
           KEESTSTDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISK
Sbjct: 160 KEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISK 219

Query: 195 NYSAT---TSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
           N SAT       GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 NCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 279

[Close]

BLAST of CmaCh08G006620 vs. ExPASy TrEMBL
Match: A0A6M4SPT6 (50S ribosomal protein L2, chloroplastic OS=Sycopsis sinensis OX=64136 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.7e-80
Identity = 173/240 (72.08%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNKKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSA---------PYALEEACTAWEGVLIDQ 134
           +  +   GAIIGDTIVS TEVPIKMGNALPLSA         PYALEEACT WEGVLIDQ
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAVISSSTSRKPYALEEACTVWEGVLIDQ 159

Query: 135 KEESTSTDMPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISK 194
           KEESTSTDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISK
Sbjct: 160 KEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISK 219

Query: 195 NYSAT---TSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
           N SAT       GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 NCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKRP 279

[Close]

BLAST of CmaCh08G006620 vs. ExPASy TrEMBL
Match: A0A7D5YQQ8 (50S ribosomal protein L2, chloroplastic OS=Terminalia phillyreifolia OX=2777731 GN=rpl2 PE=3 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 2.7e-80
Identity = 173/240 (72.08%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVSIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSA---------PYALEEACTAWEGVLIDQ 134
           +  +   GAIIGDTIVS TEVPIKMGNALPLSA         PYALEEACT WEGVLIDQ
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAVISSFTSRKPYALEEACTVWEGVLIDQ 159

Query: 135 KEESTSTDMPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISK 194
           KEESTSTDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISK
Sbjct: 160 KEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISK 219

Query: 195 NYSAT---TSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
           N SAT       GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 NCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 279

[Close]

BLAST of CmaCh08G006620 vs. NCBI nr
Match: KAA0064006.1 (ribosomal protein L2 [Cucumis melo var. makuwa])

HSP 1 Score: 328.9 bits (842), Expect = 3.1e-86
Identity = 172/205 (83.90%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDFGMKKTYMVESGAIIGDTIVSCTEVPIKMGNALPL 74
           GRN + IITAGHRGGGHKRLYR I FGMKKTYMVESGAIIGDTI+S TEVPIKMGNALP+
Sbjct: 36  GRNARGIITAGHRGGGHKRLYRPISFGMKKTYMVESGAIIGDTILSGTEVPIKMGNALPI 95

Query: 75  SA-----PYALEEACTAWEGVLIDQKEESTSTDMPLATAIHNIEITLGKGGQLARAAGAV 134
           S+     PYALEEACT WEGVLI++KEESTSTDMPL TAIHNIEITLGKGGQLARAAGAV
Sbjct: 96  SSSTSRKPYALEEACTVWEGVLIEKKEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAV 155

Query: 135 AKLIAKEEKSATLKLPSGEVRLISKNYSAT---TSGAGVNHKSLGRGGSKCWLGKRPVIR 194
           AK IAKE KSAT KLPSGEVRLISKN SAT      AGVN KSLGR GS+CWLGKRPV+R
Sbjct: 156 AKRIAKEGKSATFKLPSGEVRLISKNCSATVGQVGNAGVNQKSLGRAGSQCWLGKRPVVR 215

Query: 195 GVVMNPVDHPHGGGEGRAPIGRKNP 211
           GVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 216 GVVMNPVDHPHGGGEGRAPIGRKKP 240

[Close]

BLAST of CmaCh08G006620 vs. NCBI nr
Match: RVW36222.1 (50S ribosomal protein L2, chloroplastic [Vitis vinifera] >RVW71330.1 50S ribosomal protein L2, chloroplastic [Vitis vinifera])

HSP 1 Score: 308.5 bits (789), Expect = 4.3e-80
Identity = 173/239 (72.38%), Postives = 177/239 (74.06%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSA--------PYALEEACTAWEGVLIDQK 134
           +  +   GAIIGDTIVS TEVPIKMGNALPLSA        PYALEEACT WEGVLIDQK
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAISSSTSRKPYALEEACTVWEGVLIDQK 159

Query: 135 EESTSTDMPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISKN 194
           EESTSTDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISKN
Sbjct: 160 EESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKN 219

Query: 195 YSAT---TSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
            SAT       GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 CSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 278

[Close]

BLAST of CmaCh08G006620 vs. NCBI nr
Match: QJS51892.1 (ribosomal protein L2 [Sycopsis sinensis] >QJS51917.1 ribosomal protein L2 [Sycopsis sinensis])

HSP 1 Score: 308.1 bits (788), Expect = 5.7e-80
Identity = 173/240 (72.08%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNKKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSA---------PYALEEACTAWEGVLIDQ 134
           +  +   GAIIGDTIVS TEVPIKMGNALPLSA         PYALEEACT WEGVLIDQ
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAVISSSTSRKPYALEEACTVWEGVLIDQ 159

Query: 135 KEESTSTDMPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISK 194
           KEESTSTDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISK
Sbjct: 160 KEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISK 219

Query: 195 NYSAT---TSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
           N SAT       GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 NCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKRP 279

[Close]

BLAST of CmaCh08G006620 vs. NCBI nr
Match: YP_009715437.1 (ribosomal protein L2 [Colvillea racemosa] >YP_009715457.1 ribosomal protein L2 [Colvillea racemosa] >YP_009715752.1 ribosomal protein L2 [Zenia insignis] >YP_009715772.1 ribosomal protein L2 [Zenia insignis] >QGL08549.1 ribosomal protein L2 [Colvillea racemosa] >QGL08570.1 ribosomal protein L2 [Colvillea racemosa] >QGL08864.1 ribosomal protein L2 [Zenia insignis] >QGL08885.1 ribosomal protein L2 [Zenia insignis])

HSP 1 Score: 308.1 bits (788), Expect = 5.7e-80
Identity = 173/240 (72.08%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSA---------PYALEEACTAWEGVLIDQ 134
           +  +   GAIIGDTIVS TEVPIKMGNALPLSA         PYALEEACT WEGVLIDQ
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAVISSSTSRKPYALEEACTVWEGVLIDQ 159

Query: 135 KEESTSTDMPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISK 194
           KEESTSTDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISK
Sbjct: 160 KEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISK 219

Query: 195 NYSAT---TSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
           N SAT       GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 NCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 279

[Close]

BLAST of CmaCh08G006620 vs. NCBI nr
Match: QQL04985.1 (ribosomal protein L2 [Ammopiptanthus nanus] >QQL05006.1 ribosomal protein L2 [Ammopiptanthus nanus])

HSP 1 Score: 308.1 bits (788), Expect = 5.7e-80
Identity = 173/240 (72.08%), Postives = 177/240 (73.75%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITAGHRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITAGHRGGGHKRLYRKIDFRRNEKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSA---------PYALEEACTAWEGVLIDQ 134
           +  +   GAIIGDTIVS TEVPIKMGNALPLSA         PYALEEACT WEGVLIDQ
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPLSAVISSSTSRKPYALEEACTVWEGVLIDQ 159

Query: 135 KEESTSTDMPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISK 194
           KEESTSTDMPL TAIHNIEITLGKGGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISK
Sbjct: 160 KEESTSTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISK 219

Query: 195 NYSAT---TSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
           N SAT       GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 NCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 279

[Close]

BLAST of CmaCh08G006620 vs. TAIR 10
Match: ATCG00830.1 (ribosomal protein L2 )

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-65
Identity = 146/231 (63.20%), Postives = 151/231 (65.37%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITA HRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSAPYALEEACTAWEGVLIDQKEESTSTDM 134
           +  +   GAIIGDTIVS TEVPIKMGNALPL                          TDM
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPL--------------------------TDM 159

Query: 135 PLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISKNYSAT---T 194
           PL TAIHNIEITLG+GGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISKN SAT    
Sbjct: 160 PLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV 219

Query: 195 SGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
              GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 GNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 244

[Close]

BLAST of CmaCh08G006620 vs. TAIR 10
Match: ATCG01310.1 (ribosomal protein L2 )

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-65
Identity = 146/231 (63.20%), Postives = 151/231 (65.37%), Query Frame = 0


Query: 15  GRN-QSIITAGHRGGGHKRLYRKIDF-------------------------------GMK 74
           GRN + IITA HRGGGHKRLYRKIDF                               G K
Sbjct: 40  GRNARGIITARHRGGGHKRLYRKIDFRRNAKDIYGRIVTIEYDPNRNAYICLIHYGDGEK 99

Query: 75  KTYMVESGAIIGDTIVSCTEVPIKMGNALPLSAPYALEEACTAWEGVLIDQKEESTSTDM 134
           +  +   GAIIGDTIVS TEVPIKMGNALPL                          TDM
Sbjct: 100 RYILHPRGAIIGDTIVSGTEVPIKMGNALPL--------------------------TDM 159

Query: 135 PLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATLKLPSGEVRLISKNYSAT---T 194
           PL TAIHNIEITLG+GGQLARAAGAVAKLIAKE KSATLKLPSGEVRLISKN SAT    
Sbjct: 160 PLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATLKLPSGEVRLISKNCSATVGQV 219

Query: 195 SGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRAPIGRKNP 211
              GVN KSLGR GSKCWLGKRPV+RGVVMNPVDHPHGGGEGRAPIGRK P
Sbjct: 220 GNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRKKP 244

[Close]

BLAST of CmaCh08G006620 vs. TAIR 10
Match: AT2G44065.1 (Ribosomal protein L2 family )

HSP 1 Score: 88.6 bits (218), Expect = 6.6e-18
Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 102 MPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATL-KLPSGEVRLISKNYSA--- 161
           M + T IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+    A   
Sbjct: 68  MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIG 127

Query: 162 TTSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRA 204
           T S      K L + G   WLG RP +RGV MNP DHPHGGGEG++
Sbjct: 128 TVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKS 173

[Close]

BLAST of CmaCh08G006620 vs. TAIR 10
Match: AT2G44065.2 (Ribosomal protein L2 family )

HSP 1 Score: 88.6 bits (218), Expect = 6.6e-18
Identity = 49/106 (46.23%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 102 MPLATAIHNIEITLGKGGQLARAAGAVAKLIAKEEKSATL-KLPSGEVRLISKNYSA--- 161
           M + T IHNIE+  G+G ++ RAAG  AK++ +  K   L KLPSG+ + I+    A   
Sbjct: 68  MRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWINAKCRATIG 127

Query: 162 TTSGAGVNHKSLGRGGSKCWLGKRPVIRGVVMNPVDHPHGGGEGRA 204
           T S      K L + G   WLG RP +RGV MNP DHPHGGGEG++
Sbjct: 128 TVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKS 173

[Close]

BLAST of CmaCh08G006620 vs. TAIR 10
Match: AT3G51190.1 (Ribosomal protein L2 family )

HSP 1 Score: 67.8 bits (164), Expect = 1.2e-11
Identity = 59/208 (28.37%), Postives = 88/208 (42.31%), Query Frame = 0


Query: 6   VVKVVMPEGGRNQSIITAGHRGGGHKRLYRKIDFGMKKTYMVESGAIIGDTIVSCTEVPI 65
           +V  ++ + GR   +     R   H   Y K     K+ ++   G   G  +    +  +
Sbjct: 45  LVTEIIHDPGRGAPLARVAFR---HPFRYMK----QKELFVAAEGMYTGQYLYCGKKANL 104

Query: 66  KMGNALPLSAPYALEEACTAWEGVLIDQKEESTSTDMPLATAIHNIEITLGKGGQLARAA 125
            +GN LPL +                          +P    I N+E+ +G  G LARA+
Sbjct: 105 MVGNVLPLGS--------------------------IPEGAVICNVELHVGDRGALARAS 164

Query: 126 GAVAKLIAKEEKSAT--LKLPSGEVRLISKNYSA---TTSGAGVNHKSLGRGGS------ 185
           G  A +IA   +S T  +KLPSG  +++     A     +G G   K L + G+      
Sbjct: 165 GDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYK 215

Query: 186 ---KCWLGKRPVIRGVVMNPVDHPHGGG 200
               CW    PV+RGV MNPV+HPHGGG
Sbjct: 225 AKRNCW----PVVRGVAMNPVEHPHGGG 215

The following BLAST results are available for this feature:

BLAST of CmaCh08G006620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZK5	2.8e-66	64.50	50S ribosomal protein L2, chloroplastic OS=Cucumis sativus OX=3659 GN=rpl2-A PE=...	[more]
P18663	8.2e-66	64.07	50S ribosomal protein L2-A, chloroplastic OS=Glycine max OX=3847 GN=rpl2-A PE=3 ...	[more]
Q0ZIX7	8.2e-66	64.07	50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A PE=...	[more]
A6MMG4	1.1e-65	63.64	50S ribosomal protein L2-A, chloroplastic OS=Chloranthus spicatus OX=13006 GN=rp...	[more]
Q2PMM3	1.1e-65	64.07	50S ribosomal protein L2-B, chloroplastic OS=Glycine max OX=3847 GN=rpl2-B PE=3 ...	[more]

BLAST of CmaCh08G006620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VC43	1.5e-86	83.90	Ribosomal protein L2 (Chloroplast) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C...	[more]
A0A438GGK8	2.1e-80	72.38	50S ribosomal protein L2, chloroplastic OS=Vitis vinifera OX=29760 GN=rpl2-A_1 P...	[more]
A0A7T7D7D8	2.7e-80	72.08	Ribosomal protein L2 OS=Ammopiptanthus nanus OX=111851 GN=rpl2 PE=4 SV=1	[more]
A0A6M4SPT6	2.7e-80	72.08	50S ribosomal protein L2, chloroplastic OS=Sycopsis sinensis OX=64136 GN=rpl2 PE...	[more]
A0A7D5YQQ8	2.7e-80	72.08	50S ribosomal protein L2, chloroplastic OS=Terminalia phillyreifolia OX=2777731 ...	[more]

BLAST of CmaCh08G006620 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064006.1	3.1e-86	83.90	ribosomal protein L2 [Cucumis melo var. makuwa]	[more]
RVW36222.1	4.3e-80	72.38	50S ribosomal protein L2, chloroplastic [Vitis vinifera] >RVW71330.1 50S ribosom...	[more]
QJS51892.1	5.7e-80	72.08	ribosomal protein L2 [Sycopsis sinensis] >QJS51917.1 ribosomal protein L2 [Sycop...	[more]
YP_009715437.1	5.7e-80	72.08	ribosomal protein L2 [Colvillea racemosa] >YP_009715457.1 ribosomal protein L2 [...	[more]
QQL04985.1	5.7e-80	72.08	ribosomal protein L2 [Ammopiptanthus nanus] >QQL05006.1 ribosomal protein L2 [Am...	[more]

BLAST of CmaCh08G006620 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00830.1	1.1e-65	63.20	ribosomal protein L2	[more]
ATCG01310.1	1.1e-65	63.20	ribosomal protein L2	[more]
AT2G44065.1	6.6e-18	46.23	Ribosomal protein L2 family	[more]
AT2G44065.2	6.6e-18	46.23	Ribosomal protein L2 family	[more]
AT3G51190.1	1.2e-11	28.37	Ribosomal protein L2 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022669	Ribosomal protein L2, C-terminal	SMART	SM01382	Ribosomal_L2_C_2	coord: 65..210 e-value: 6.0E-49 score: 178.6
IPR022669	Ribosomal protein L2, C-terminal	PFAM	PF03947	Ribosomal_L2_C	coord: 101..209 e-value: 1.3E-36 score: 125.5
None	No IPR available	GENE3D	2.40.50.140		coord: 3..62 e-value: 1.4E-7 score: 33.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 189..210
None	No IPR available	PANTHER	PTHR13691:SF55	50S RIBOSOMAL PROTEIN L2, CHLOROPLASTIC	coord: 42..210 coord: 14..40
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 63..162 e-value: 1.5E-27 score: 97.4
IPR014726	Ribosomal protein L2, domain 3	GENE3D	4.10.950.10	Ribosomal protein L2, domain 3	coord: 163..210 e-value: 1.4E-18 score: 68.8
IPR002171	Ribosomal protein L2	PANTHER	PTHR13691	RIBOSOMAL PROTEIN L2	coord: 42..210 coord: 14..40
IPR022671	Ribosomal protein L2, conserved site	PROSITE	PS00467	RIBOSOMAL_L2	coord: 182..193
IPR012340	Nucleic acid-binding, OB-fold	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 14..66
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 101..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G006620.1	CmaCh08G006620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0015934	large ribosomal subunit
cellular_component	GO:0009536	plastid
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0016740	transferase activity