CmaCh08G006570 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh08G006570
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionRibulose bisphosphate carboxylase large chain
LocationCma_Chr08: 3914859 .. 3918504 (-)
RNA-Seq ExpressionCmaCh08G006570
SyntenyCmaCh08G006570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGAGCAGTTTATGAATGTCTACAATGCTACTGCGGATGCGAAGAAATGATGAAAAGGGGCTTTGCTCGAGAATTGGGAGTTCCTATCGTAATGCATGACTACTTAACTGGTGGATTCACTACAAATCCTAGAAAGAAAAGAGCTAATGAACAGAATATGCTTTACAAAGTGTAAGAAGGTAAAAGACAAAGAGAATGAATTTCATATGCTTTACCGAGTGAAAGAAGTAGAATGAATCTTGAGTTTCGGCTTTCCCGAGGAGCTACTGAACCTATTTACCGAGTCTTTGAATAAAGAGGAACGAAGCGACCTTGTTTACTGTGTTTGAAGGTGAAGGATAACGAATAAGGAGTTTTTCTTCTCTTTTTCTTTGACCTTGTTCAATCTGTTGAAGGAGCGAAGCCACTTTACAGTGAAAGAAGGGAGCCGAAAGAAGCCGAGGTTCAGGATCATTAATCTTGCTTCTTTTACCGACTGTAACTGTAAAGGTGATTGAGCGAAGCCATGAGACTGATAGGATAGGTTACGGAGTTCAGAGGATCATTAATCTCTTTTCTTACTGTTCCGGAGTTCAGGCAATGGAATAGCTTTCCTTGATTCTCATACAGCTGCTTTACTGACTCGAAGAGGAGAGGGAAGAAGGAGCGGCTTGGCTTTCCCCCCTTGTTTACTGTGAATGAATAAATAGGGACAAGAATGCATCTTGTTGAGTCTTTCAATGAAAGACTTTCGAGAACTGTCCCTTCTTTCTTTGTTCCTGTTTCGGAGTCAATTCTCATTCATAAGCTTGACTTTAACCTATTGCCCTTGTGAAAAAAAAGAGCTACTGAAACAGAATATGCTTTACCTAGTTCAATCAGTAGGATCAGTCTAATTCATCTTGTCTTGCTTCAGTCTCTCATTCATCGAGAGTTGAGGAGAAGAAGTAGTTAAGTAAAGGACACGCGAAGGCAATGGAATAGCTTTACCAAGTTGTAGAGGTTCAGGATTGTTGAATAGGAACAAAATAAGGAGAAAGAGAAGAGACCGAGTTTACAAGGTTCAGGAGCTTCTCATCCAATCCAGCCTATTTCCCTTGTTTACAGTTCGGGAAAGAAAGGATCAGATCAAGAATAGTCTTTCCCGAGTTCAGTAGTTCACCCTGATTCATCGAGAGTGTTTACAGTTCAGGCAATGGAATAGCTTGACCTTCAGATCCTCCTGTTTACCTCCTTCCTTCAATAACATATGGGAATAGAGTATAAGGAGTCTTTCAGGAAGTAGCTCAGGGCATATCTATCGGGGCAGGTTCAGTCAGTCGCTTCGCTTAATAATCTCATTTGACTCTCCTCTCCCTTCTAGTTTCGGCTTTCAACACTTCCTCCCTTCTTTGTTCCGGGTCAGGTGAAGGAAGTCGCTTCGCTTAATCTCTTTTCTTTTCCCGGCTGTAAAGGTGAAAGACTGAGTGAAAGAAGGGAATGGAATTGTTCAACCAACCGACAGGTGAATGGAAATAACAGAGAAGAGACCATAAAGGATAGGTTCAGGGGAAGGGTTTCATTTAGTAGCTCAGGGAATATAGGTGAACAAGAACTTCGAATAAGGAACAATAACTGCACACTGTTACAGATATATTCCCATCAAAAAGCTTTCCTTCCTTACACTTAAACTTAAAGAACGGAAGAAAAAGAGTTTACAGTCTTTGTGAAACCACCCTTGTTCAAGTCGTCCTAAGACAAGAGCTGATAGGTTCAGAAGAAATAATCCATAGGTTTCGGAGTTCAGGGGTTCAGAGTCGCTTTTTACATTTGTTGAGTCTTTCAAGCAGAAGAAAGAAGAAGAATAAATGGGTTATGAGAAGGTAATATCGGAAAAGGTTTAAGGTTGAGCAAATCTTTCTTATTCTTAGTTTATAGTGAATAAATGGGTGAAGGGGAATTAATCTTTCTTTTTCAATTCAAGAAGGGACAGGAGAAAGAATCGGACGGAAAGGGGCAAAACAGAGGTTAATCTTAATAAAGAAGGTCAGAGGTAAATAGGTCAAGCAGCTAATTCTCAACCACTTTACCGAGTTGGAGAGGTTCAGGATTTCATAATGATTTATTTCCTTGTTTACAGTTCAGTTAAATAGGAGAAAGAAAGAACAGATTCGAGACACACCTTGTTTACAGTTCAATCAGGTAATAACAAAGGGGAATAGAGGCTCCGGTTCGTTCCGGTTCAGAAGCTAATCTCATTGACTCTACGGTAATTCAGTAGCTTCTCTTTCAATCAATTCATTCTCTGATTCATGAATTTACTCTCAAGTTCAGGATTGAATAACTCTTGTCTTGCTTGAGGCTTGACTTCCGGTTCAGGGGCGAAGGCATGAAACCGAGTTTACGAGGGGCAGGCAATGGAATTGTGAAACCGAGTTTACGAGGTGAAGGGGAAGGAGAAAGAAGAAAGAGGTTCTAGCAAGAGTGAAGGAGAATGCATCTTTCCTTTCGTCTTTCCTTGATTCATAAGGTTTAGGAGTGAGAGAAGGTGCGTGCAGGTTCAGGATTTCATTCATTTATTTACTCGACTGTAATAGAATATCTGATTCATCTTGTCTTCTTCTTCCTGTTCTGTCGAATGAGTCTTACAGGCAGGGGAGTAGTTCAAGAGTTCAATTAGGTTTATGAGTTTATCTCGTTTACAGTTCATTCATAAATAGGTTCTGGAGCTCAGCCACTTTCACAGTTCAATCAGCAGGTTCAGGTTCTTGAGCGGAGCAATGGGACATCGATACGCGAATAAGCTTTACCTCTCATTGGACTCGGCATTAAATTAAAGGTTCAGAGGATTACATAGGAACAGAATAAGAAGACAGAGAAAAGAAATAGGTTCCCGTTCAGTCGCTTCCCTTTCTTTCTCTTCGTTTACTGGGAATAGAGGAATAGACAATGGAAGGTTCCGGAGTTCAAGATCATTCTTCTTTCGTCTTGACTTCCTGTTCACTCTCATTCATTTCATATGCTTTCTTTACAGTCTTTGTTTGAATAACTCACAATCACTTCTGGTAATATAGAGAGAGGTTTAGGTTCCGGTTTCACTAGCTCTTTTCTGTACTCTCCAGTTCCGGATTGAATGAAAGAATAAATAGGAGCAAGAGCCGTAGTTCATTCTAATTCTTCTTGCTTGAGTCTTGACTCTCCATTCACCCGTCGGTAATTAATTCCATTTCCTTCTTTCTTTCACTGTAAGCTCGTTCAATCAGGTTCCGTCATTCATAAGGTATCAGGGTCAGGTTCAGGAGAGAAGCCAAGCCAGCCTATTTACTTCCTGAAAGAAGGAATATGCTTTACCTTGTTCAATCAGGTTTAGTCGCTTCTCTTCTTCTTCATTCTGTAAAGGTTCCAGTCATAGAGGTAGGGGGAGCAAATCCTTTTTTCCCTTGTTTATTTACTGTTAGTGGAGTAAAAGAGTGAGTTCAATCAAAGAGCTACTTCATTCATCTTTCCTTCAATCAATTCATTCTCGAATCTGTTCTTTAAACACTGTAAACAAGGTCTTCTCTCTCTCTTTCTCCTTATGATTTAGAAAGGTAAACTCGATCGAATTAATCTTGAGTCTTTACAGTTCAGGGAAAGTAAATTCTAGCTTTACCGAGTGTTTGAAGCGAGAGGGTCAGGGTCAG

mRNA sequence

ATGGTAAGAGCAGTTTATGAATGTCTACAATGCTACTGCGGATGCGAAGAAATGATGAAAAGGGGCTTTGCTCGAGAATTGGGAGTTCCTATCGTAATGCATGACTACTTAACTGGTTCAGAAGAAATAATCCATAGGTTTCGGAGTTCAGGGGTTCAGAGTCGCTTTTTACATTTGTTGAGTCTTTCAAGCAGAAGAAAGAAGAAGAATAAATGGGTTATGAGAAGAAGGGACAGGAGAAAGAATCGGACGGAAAGGGGCAAAACAGAGAGGCTCCGGTTCGTTCCGGTTCAGAAGCTAATCTCATTGACTCTACGTTCAGGGAAAGTAAATTCTAGCTTTACCGAGTGTTTGAAGCGAGAGGGTCAGGGTCAG

Coding sequence (CDS)

ATGGTAAGAGCAGTTTATGAATGTCTACAATGCTACTGCGGATGCGAAGAAATGATGAAAAGGGGCTTTGCTCGAGAATTGGGAGTTCCTATCGTAATGCATGACTACTTAACTGGTTCAGAAGAAATAATCCATAGGTTTCGGAGTTCAGGGGTTCAGAGTCGCTTTTTACATTTGTTGAGTCTTTCAAGCAGAAGAAAGAAGAAGAATAAATGGGTTATGAGAAGAAGGGACAGGAGAAAGAATCGGACGGAAAGGGGCAAAACAGAGAGGCTCCGGTTCGTTCCGGTTCAGAAGCTAATCTCATTGACTCTACGTTCAGGGAAAGTAAATTCTAGCTTTACCGAGTGTTTGAAGCGAGAGGGTCAGGGTCAG

Protein sequence

MVRAVYECLQCYCGCEEMMKRGFARELGVPIVMHDYLTGSEEIIHRFRSSGVQSRFLHLLSLSSRRKKKNKWVMRRRDRRKNRTERGKTERLRFVPVQKLISLTLRSGKVNSSFTECLKREGQGQ
Homology
[Close]
BLAST of CmaCh08G006570 vs. ExPASy Swiss-Prot
Match: O78258 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Abies firma OX=78260 GN=rbcL PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.4e-06
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGV 53
           CEEMMKR  FARELGVPIVMHDYLTG    +  + H  R +G+
Sbjct: 240 CEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGL 282

[Close]
BLAST of CmaCh08G006570 vs. ExPASy Swiss-Prot
Match: O78259 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Abies homolepis OX=78261 GN=rbcL PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.4e-06
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGV 53
           CEEMMKR  FARELGVPIVMHDYLTG    +  + H  R +G+
Sbjct: 240 CEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGL 282

[Close]
BLAST of CmaCh08G006570 vs. ExPASy Swiss-Prot
Match: O78262 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Abies sachalinensis OX=78264 GN=rbcL PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.4e-06
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGV 53
           CEEMMKR  FARELGVPIVMHDYLTG    +  + H  R +G+
Sbjct: 240 CEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGL 282

[Close]
BLAST of CmaCh08G006570 vs. ExPASy Swiss-Prot
Match: O78260 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Abies veitchii OX=78262 GN=rbcL PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.4e-06
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGV 53
           CEEMMKR  FARELGVPIVMHDYLTG    +  + H  R +G+
Sbjct: 240 CEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGL 282

[Close]
BLAST of CmaCh08G006570 vs. ExPASy Swiss-Prot
Match: P24680 (Ribulose bisphosphate carboxylase large chain OS=Afrocarpus gracilior OX=56897 GN=rbcL PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.4e-06
Identity = 27/43 (62.79%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGV 53
           CEEMMKR  FARELGVPIVMHDYLTG    +  + H  R +G+
Sbjct: 247 CEEMMKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGL 289

[Close]
BLAST of CmaCh08G006570 vs. ExPASy TrEMBL
Match: A0A7T3RB33 (Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit OS=Chrysopogon zizanioides OX=167337 GN=rbcL PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 3.8e-05
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 9  LQCYCGCEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGV 53
          L+C C CEEM+KR  FARELGVPIVMHDYLTG    +  + H  R +G+
Sbjct: 21 LECDCRCEEMIKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGL 69

[Close]
BLAST of CmaCh08G006570 vs. ExPASy TrEMBL
Match: L0N899 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Graphorkis concolor var. alphabetica OX=796474 GN=rbcL PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 8.6e-05
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 10  QCYCG-CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGV 53
           +C CG CEEMMKR  FARELGVPI+MHDYLTG    +  + H  R +G+
Sbjct: 239 ECNCGYCEEMMKRAVFARELGVPIIMHDYLTGGFTANTSLAHYCRDNGL 287

[Close]
BLAST of CmaCh08G006570 vs. ExPASy TrEMBL
Match: A0A076J7J3 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Rhodiola tibetica OX=1442785 GN=rbcL PE=3 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGVQSRFLHL 60
           CEEMMKR  FARELGVPIVMHDYLTG    +  ++H  R +G+   FLH+
Sbjct: 222 CEEMMKRAVFARELGVPIVMHDYLTGGFTANTSLVHYCRDNGL---FLHI 268

[Close]
BLAST of CmaCh08G006570 vs. ExPASy TrEMBL
Match: A0A2G2Z7Z2 (Ribulose bisphosphate carboxylase large chain OS=Capsicum annuum OX=4072 GN=T459_16073 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.5e-04
Identity = 35/75 (46.67%), Postives = 40/75 (53.33%), Query Frame = 0 

Query: 3   RAVYECLQ--------------------CYCGCEEMMKRG-FARELGVPIVMHDYLTG-- 53
           RAVYECL+                      C CEEMMKR  FARELGVPIVMHDYLTG  
Sbjct: 194 RAVYECLRGGLDFTKDDENVNSQPFMLWRDCKCEEMMKRAVFARELGVPIVMHDYLTGGF 253

[Close]
BLAST of CmaCh08G006570 vs. ExPASy TrEMBL
Match: D6C636 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Psychotria cf. hollandiae PYB 01 OX=715780 GN=rbcL PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.3e-04
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGVQSRFLHL 60
           CEEMMKR  FARELGVPIVMHDYLTG    +  + H  R +G+   FLH+
Sbjct: 247 CEEMMKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGL---FLHI 293

[Close]
BLAST of CmaCh08G006570 vs. NCBI nr
Match: YP_010131796.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Chrysopogon zizanioides] >QPZ94316.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Chrysopogon zizanioides])

HSP 1 Score: 57.8 bits (138), Expect = 7.9e-05
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 9  LQCYCGCEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGV 53
          L+C C CEEM+KR  FARELGVPIVMHDYLTG    +  + H  R +G+
Sbjct: 21 LECDCRCEEMIKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGL 69

[Close]
BLAST of CmaCh08G006570 vs. NCBI nr
Match: CBM42421.1 (RuBisCO, partial [Graphorkis concolor var. alphabetica])

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-04
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 10  QCYCG-CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGV 53
           +C CG CEEMMKR  FARELGVPI+MHDYLTG    +  + H  R +G+
Sbjct: 239 ECNCGYCEEMMKRAVFARELGVPIIMHDYLTGGFTANTSLAHYCRDNGL 287

[Close]
BLAST of CmaCh08G006570 vs. NCBI nr
Match: AII70592.1 (ribulose 1,5-bisphosphate carboxylase, partial [Rhodiola tibetica])

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-04
Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGVQSRFLHL 60
           CEEMMKR  FARELGVPIVMHDYLTG    +  ++H  R +G+   FLH+
Sbjct: 222 CEEMMKRAVFARELGVPIVMHDYLTGGFTANTSLVHYCRDNGL---FLHI 268

[Close]
BLAST of CmaCh08G006570 vs. NCBI nr
Match: PHT78021.1 (Ribulose bisphosphate carboxylase large chain [Capsicum annuum])

HSP 1 Score: 55.8 bits (133), Expect = 3.0e-04
Identity = 35/75 (46.67%), Postives = 40/75 (53.33%), Query Frame = 0 

Query: 3   RAVYECLQ--------------------CYCGCEEMMKRG-FARELGVPIVMHDYLTG-- 53
           RAVYECL+                      C CEEMMKR  FARELGVPIVMHDYLTG  
Sbjct: 194 RAVYECLRGGLDFTKDDENVNSQPFMLWRDCKCEEMMKRAVFARELGVPIVMHDYLTGGF 253

[Close]
BLAST of CmaCh08G006570 vs. NCBI nr
Match: AAQ24828.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Delarbrea balansae])

HSP 1 Score: 54.7 bits (130), Expect = 6.7e-04
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGVQSRFLHL 60
           CEEMMKR  FARELGVPIVMHDYLTG    +  + H  R +G+   FLH+
Sbjct: 225 CEEMMKRAIFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGL---FLHI 271

[Close]
BLAST of CmaCh08G006570 vs. TAIR 10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases )

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-06
Identity = 26/43 (60.47%), Postives = 31/43 (72.09%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG----SEEIIHRFRSSGV 53
           CEEM+KR  FARELGVPIVMHDYLTG    +  + H  R +G+
Sbjct: 247 CEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLSHYCRDNGL 289

[Close]
BLAST of CmaCh08G006570 vs. TAIR 10
Match: AT2G07732.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain )

HSP 1 Score: 49.7 bits (117), Expect = 2.0e-06
Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTG 40
           CEEM+KR  FARELGVPIVMHDYLTG
Sbjct: 79  CEEMIKRAVFARELGVPIVMHDYLTG 104

[Close]
BLAST of CmaCh08G006570 vs. TAIR 10
Match: ATMG00280.1 (Ribulose bisphosphate carboxylase large chain, catalytic domain )

HSP 1 Score: 45.4 bits (106), Expect = 3.8e-05
Identity = 24/33 (72.73%), Postives = 25/33 (75.76%), Query Frame = 0 

Query: 15  CEEMMKRG-FARELGVPIVMHDYLTGSEEIIHR 47
           CEEM+KR  FARELGVPIVMHDYL      IHR
Sbjct: 79  CEEMIKRAVFARELGVPIVMHDYLNRG---IHR 108

The following BLAST results are available for this feature:
BLAST of CmaCh08G006570 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O782584.4e-0662.79Ribulose bisphosphate carboxylase large chain (Fragment) OS=Abies firma OX=78260... [more]
O782594.4e-0662.79Ribulose bisphosphate carboxylase large chain (Fragment) OS=Abies homolepis OX=7... [more]
O782624.4e-0662.79Ribulose bisphosphate carboxylase large chain (Fragment) OS=Abies sachalinensis ... [more]
O782604.4e-0662.79Ribulose bisphosphate carboxylase large chain (Fragment) OS=Abies veitchii OX=78... [more]
P246804.4e-0662.79Ribulose bisphosphate carboxylase large chain OS=Afrocarpus gracilior OX=56897 G... [more]
BLAST of CmaCh08G006570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7T3RB333.8e-0559.18Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit OS=Chrysopogon ziz... [more]
L0N8998.6e-0559.18Ribulose bisphosphate carboxylase large chain (Fragment) OS=Graphorkis concolor ... [more]
A0A076J7J31.1e-0460.00Ribulose bisphosphate carboxylase large chain (Fragment) OS=Rhodiola tibetica OX... [more]
A0A2G2Z7Z21.5e-0446.67Ribulose bisphosphate carboxylase large chain OS=Capsicum annuum OX=4072 GN=T459... [more]
D6C6363.3e-0460.00Ribulose bisphosphate carboxylase large chain (Fragment) OS=Psychotria cf. holla... [more]
BLAST of CmaCh08G006570 vs. NCBI nr
Match NameE-valueIdentityDescription
YP_010131796.17.9e-0559.18ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Chrysopogon zizan... [more]
CBM42421.11.8e-0459.18RuBisCO, partial [Graphorkis concolor var. alphabetica][more]
AII70592.12.3e-0460.00ribulose 1,5-bisphosphate carboxylase, partial [Rhodiola tibetica][more]
PHT78021.13.0e-0446.67Ribulose bisphosphate carboxylase large chain [Capsicum annuum][more]
AAQ24828.16.7e-0460.00ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit, partial [Delarbre... [more]
BLAST of CmaCh08G006570 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00490.11.2e-0660.47ribulose-bisphosphate carboxylases [more]
AT2G07732.12.0e-0688.46Ribulose bisphosphate carboxylase large chain, catalytic domain [more]
ATMG00280.13.8e-0572.73Ribulose bisphosphate carboxylase large chain, catalytic domain [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G006570.1CmaCh08G006570.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015977 carbon fixation
biological_process GO:0015979 photosynthesis
cellular_component GO:0009536 plastid
molecular_function GO:0016829 lyase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0016491 oxidoreductase activity