CmaCh08G006500 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh08G006500
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionDNA-directed RNA polymerase subunit beta
LocationCma_Chr08: 3777109 .. 3779981 (+)
RNA-Seq ExpressionCmaCh08G006500
SyntenyCmaCh08G006500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAGGAGAGTCAAATGAGAAGAAGGTAAAGCGACTAAACTGGAAGCAAAGCCGAAAGCGAAACCCTTTTCCTCTATTTATTACCTTCCCTTATTTATTGAGGTAATTTGCAAGTCAAGACTCAACTCAAGATTCATTCTTCTTTTCCTTCTTTCACGGTAAACTAAGACTCAACAAGAAGAAATTCATTAGCTTAGCTGCTTTACAGGAGAAAGAGATGAATGAGAGTGAACGAACCCTCTTTCTCTCCTCTCCTTAACAGTCGAGCTGCTTCGCGCCTCTTCTCGTGGAGCTGCTTCGCCCGGTCTCATTTCGCTCATTTGCCTCGTAAACTAAACTATAAGTCAAGCTCTTTCGCTCCTGAATCTCTCCCTTATGAATCAAAAAAAGACTCAACTCAAGATTAATTCGACTTTACAGTCTTTGAATCAATGAATTAGCTGCAAAGACTCAACTCAACAAACAAGATTCATTCTCCTTCACCGATATATATGACTTGAGCTTATTGAACTGTAGACAAAGAGAAATACTCCAGATGAATGAGACTTAACTCCGCTGAATCTTTGACTGATTGAACTCGTTCTCGTGGCTTCGTCGCTCCTGAACCGATATATATGCCCTTGATTGAACAGTAAGAAAAGAAGCAAGCTCCTTCCCCTGAACCTGATGGAACTCCTTCCCCTAAACCCTCTTTCACTCCTCTCCCTATCGGAGGTCTCTCTCGTTGCTTCGCTCATTCACCTATTCATTGTCGGTCCCATTGCTTCGCTCCTAAACATGATTTTACAAGGTAAAAGACAAAGAGAATGAATTGAAGAATCAAATCAAAGAAGAATCAGAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAGAGTTTACAGTGAAAGAAAGAAGAAGAATCAATAAATTAGAAGCTTCTTTCAAAGATGAAACTAAAGATGAATGATCCTGAACTACTTCCTGAACCGATATAACCTAACCTGATTTCCGGAGGTCAAAGTAGCTCCTTCACTACTGAACCTGAACCTGAACCTGACAAGAAAGAAAGAGAATGCAAGAATCAGAATCAGATATTCCTTCGGAACCAGAACCTTATACTCAATTACCTGACCTACACCTATTTATTCAAAGTAAACGAAGAGAAAGCAAGACAAGATGAATTACAGGAAGGAAAGAGAAAATCAAGCTTAATGAGAGTGAACTGGAAGGAAAGACGAAGAAAGATGAATGATGGGAATATAACTATACTAAGTAAGCAGTGTTCAGTTATTGCATTAAGGAAGTCAAGATGAATGAGACGAAACAAATGAAAAAAGATCAGCTCATTCACCTTCATTTTCTTCTTCTGCCTGAACCTCCCTTCCCGGAACCTTTACTGTCGAGCTACTCCTATTTCTTCTTTCTCCTTCACCTTTACAGGAAAGAAAAGAATAAGAAATCCTTCACCTCGGCTTCGCCCCTTTACTCTTCATTCTCCTTAACTCCTTGTTCCGTTCTTGTTCAGTTATTCTTTCATCACAAGGTAAATAGGTGTTCATTCAGTAGCTCTTTGATTGAACTGATCTTGATCCTCTCGCTACTTACTCATTCAGCCAGCTGAACCAATATTCCCTATTTATTCTTCTTTAACTGTAACTGTAAACGAAGAGAAAGAGAAGCGACTAAACTAGAACCAGATTGGGTAATTAGGAAGGAAAGAGAGGAATGAGACTGAACCTCTATTTATTCCCTTTTTTACAGTTCAAGAAATCCGGGAGAGAGAAGAGACCGTCAAATAGTGAACCCCTTGTTTACAGTCGAGTAAATTAATTAGCTGTTTTTCAAGACTCAACCTTATTCCTATGTGTTTACAGTGAGAATGAAAGAAGAAGAAGAAATTCATTAGATTAGCTGCTTACAAGAGAATTGATTGAATGAAGAAAGAAAGGAAAGACTCTCGATTCATTCTCCTTTTCTTTGACAGGCAAGTCAATTCATTAGATGGCTGTTGAGTAAAGAAAAGATAAGAGAATTGAAAGACTGAAGATGAATGAGAGTGAAGACGAAAGAAGAATTAGACTGAACTACTGAACGAACCTGATTGAACGAACCCATCCTTTACAGTTCGTTCTAGAATCAATGAATATTCAATCCCGAACCTTTACTCCTGAACCTTAACCGATAGAGAATGAAAGAAGGGAGAGTCAATTCCTTTCCTTGCAGCTCAATCACCTGAACTGGAACTCTTGAACAAGGTCAAGCTATTTGATTGAATTCTCCTTCCCCTTATACGACTCTGAGCTTATTGTAAACGAGGTCGGTCTCACAGCTTGGCCCCTTTCCTCTGCATTCTGCTTTTCCTCTTCGTCTGGTTTTCATCATTCCTCTCCTGCCTGCCTGTAAGAAGGATGAATGAACCTATTTCTTCTTAAACGGATCTTTCTCCTCTCGCAACTGACTCCTGACCCGGACCCTTCTTTCACTTCTCTTTCTCCCTTGAACTTGATTGGAACGCCACGTGGCTCGAGATTCAGGGGTTGCCGCTATAGCCGAACACGGGGGAAAGATCATTTATACCGGACAAGATCCTTTTTTCGGGCAATGGGTATACTCTCGGAATTCCATTAGTTCTATATCAACGTTCTAACAAAAAGACTTGTATGCAGCAAAAATCCCAAGTTCCCCAGGGTAAATGCATTAAAAAAGGGCAAATGTTAGCGGACGGTGCTGCTTTAGTGGCGAACTTGCGTTGGTAAAAACCGTATTAGTAGCTTATATGCCATGGGAAGGTTACAATTCTGAAGATGCAGTACTAATTAGCGAGCGTCTGGTATATGAAGATATTTATACTTCTTTCCACGTACATGGATACGGAAATATGAAATTCAAACTCATG

mRNA sequence

AGAGGAGAGTCAAATGAGAAGAAGGTAAAGCGACTAAACTGGAAGCAAAGCCGAAAGCGAAACCCTTTTCCTCTATTTATTACCTTCCCTTATTTATTGAGGGCAAATGTTAGCGGACGGTGCTGCTTTAGTGGCGAACTTGCGTTGGTAAAAACCGTATTAGTAGCTTATATGCCATGGGAAGGTTACAATTCTGAAGATGCAGTACTAATTAGCGAGCGTCTGGTATATGAAGATATTTATACTTCTTTCCACGTACATGGATACGGAAATATGAAATTCAAACTCATG

Coding sequence (CDS)

AGAGGAGAGTCAAATGAGAAGAAGGTAAAGCGACTAAACTGGAAGCAAAGCCGAAAGCGAAACCCTTTTCCTCTATTTATTACCTTCCCTTATTTATTGAGGGCAAATGTTAGCGGACGGTGCTGCTTTAGTGGCGAACTTGCGTTGGTAAAAACCGTATTAGTAGCTTATATGCCATGGGAAGGTTACAATTCTGAAGATGCAGTACTAATTAGCGAGCGTCTGGTATATGAAGATATTTATACTTCTTTCCACGTACATGGATACGGAAATATGAAATTCAAACTCATG

Protein sequence

RGESNEKKVKRLNWKQSRKRNPFPLFITFPYLLRANVSGRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGYGNMKFKLM
Homology
[Close]
BLAST of CmaCh08G006500 vs. ExPASy Swiss-Prot
Match: Q8S8X9 (DNA-directed RNA polymerase subunit beta OS=Atropa belladonna OX=33113 GN=rpoB PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16
Identity = 41/51 (80.39%), Postives = 42/51 (82.35%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G     GELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 641 GAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 691

[Close]
BLAST of CmaCh08G006500 vs. ExPASy Swiss-Prot
Match: Q06RD9 (DNA-directed RNA polymerase subunit beta OS=Jasminum nudiflorum OX=126431 GN=rpoB PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16
Identity = 41/51 (80.39%), Postives = 42/51 (82.35%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G     GELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 643 GAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 693

[Close]
BLAST of CmaCh08G006500 vs. ExPASy Swiss-Prot
Match: Q3C1G7 (DNA-directed RNA polymerase subunit beta OS=Nicotiana sylvestris OX=4096 GN=rpoB PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16
Identity = 41/51 (80.39%), Postives = 42/51 (82.35%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G     GELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 641 GAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 691

[Close]
BLAST of CmaCh08G006500 vs. ExPASy Swiss-Prot
Match: Q33C46 (DNA-directed RNA polymerase subunit beta OS=Nicotiana tomentosiformis OX=4098 GN=rpoB PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16
Identity = 41/51 (80.39%), Postives = 42/51 (82.35%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G     GELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 641 GAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 691

[Close]
BLAST of CmaCh08G006500 vs. ExPASy Swiss-Prot
Match: Q2MIJ5 (DNA-directed RNA polymerase subunit beta OS=Solanum bulbocastanum OX=147425 GN=rpoB PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.2e-16
Identity = 41/51 (80.39%), Postives = 42/51 (82.35%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G     GELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 641 GAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 691

[Close]
BLAST of CmaCh08G006500 vs. ExPASy TrEMBL
Match: A0A7H0R3B3 (DNA-directed RNA polymerase subunit beta OS=Oberonioides microtatantha OX=1559823 GN=rpoB PE=3 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 9.2e-15
Identity = 42/52 (80.77%), Postives = 43/52 (82.69%), Query Frame = 0 

Query: 38  SGRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           SG     GELAL K VLVAYMPWEGYN EDAVLISERLVYEDIYTSFH+H Y
Sbjct: 640 SGAATAGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIHKY 691

[Close]
BLAST of CmaCh08G006500 vs. ExPASy TrEMBL
Match: H2F6Q4 (DNA-directed RNA polymerase subunit beta OS=Scadoxus cinnabarinus OX=112577 GN=rpoB PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.2e-14
Identity = 42/53 (79.25%), Postives = 43/53 (81.13%), Query Frame = 0 

Query: 37  VSGRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           V G     GELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 639 VDGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 691

[Close]
BLAST of CmaCh08G006500 vs. ExPASy TrEMBL
Match: G0Y398 (DNA-directed RNA polymerase (Fragment) OS=Sisyrinchium striatum OX=59001 GN=rpoB PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14
Identity = 42/51 (82.35%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G    SGELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 75  GAATVSGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 125

[Close]
BLAST of CmaCh08G006500 vs. ExPASy TrEMBL
Match: A0A0S2IFG3 (DNA-directed RNA polymerase subunit beta OS=Cucurbita moschata OX=3662 GN=rpoB PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14
Identity = 42/51 (82.35%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G    SGELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 641 GAATVSGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 691

[Close]
BLAST of CmaCh08G006500 vs. ExPASy TrEMBL
Match: A0A0S2IE41 (DNA-directed RNA polymerase subunit beta OS=Cucurbita argyrosperma OX=34294 GN=rpoB PE=3 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.6e-14
Identity = 42/51 (82.35%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G    SGELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 641 GAATVSGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 691

[Close]
BLAST of CmaCh08G006500 vs. NCBI nr
Match: KAF3625926.1 (hypothetical protein FXO37_30605 [Capsicum annuum])

HSP 1 Score: 91.7 bits (226), Expect = 3.8e-15
Identity = 46/59 (77.97%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGYGNMKFKLM 98
           G     GEL+L K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSF    YGNMKF+LM
Sbjct: 206 GGATVGGELSLGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSF---TYGNMKFRLM 261

[Close]
BLAST of CmaCh08G006500 vs. NCBI nr
Match: YP_009996519.1 (RNA polymerase beta subunit [Oberonioides microtatantha] >QNQ65996.1 RNA polymerase beta subunit [Oberonioides microtatantha])

HSP 1 Score: 89.4 bits (220), Expect = 1.9e-14
Identity = 42/52 (80.77%), Postives = 43/52 (82.69%), Query Frame = 0 

Query: 38  SGRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           SG     GELAL K VLVAYMPWEGYN EDAVLISERLVYEDIYTSFH+H Y
Sbjct: 640 SGAATAGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIHKY 691

[Close]
BLAST of CmaCh08G006500 vs. NCBI nr
Match: AEX94337.1 (RNA polymerase beta subunit [Scadoxus cinnabarinus])

HSP 1 Score: 89.0 bits (219), Expect = 2.5e-14
Identity = 42/53 (79.25%), Postives = 43/53 (81.13%), Query Frame = 0 

Query: 37  VSGRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           V G     GELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 639 VDGAATVGGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 691

[Close]
BLAST of CmaCh08G006500 vs. NCBI nr
Match: AEJ90756.1 (RNA polymerase beta subunit, partial [Sisyrinchium macrocarpum subsp. macrocarpum] >AEJ90823.1 RNA polymerase beta subunit, partial [Sisyrinchium macrocarpum subsp. laetum] >AST24576.1 RNA polymerase beta subunit, partial [Sisyrinchium macrocarpum])

HSP 1 Score: 88.6 bits (218), Expect = 3.3e-14
Identity = 42/51 (82.35%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G    SGELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 75  GAATVSGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 125

[Close]
BLAST of CmaCh08G006500 vs. NCBI nr
Match: YP_009175759.1 (RNA polymerase beta subunit [Astragalus mongholicus var. nakaianus] >ALH42737.1 RNA polymerase beta subunit [Astragalus mongholicus var. nakaianus] >ANK78934.1 RNA polymerase beta subunit [Astragalus membranaceus var. membranaceus])

HSP 1 Score: 88.6 bits (218), Expect = 3.3e-14
Identity = 42/51 (82.35%), Postives = 43/51 (84.31%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G    SGELAL K VLVAYMPWEGYNSEDAVLISERLVYEDIYTSFH+  Y
Sbjct: 641 GAATVSGELALGKNVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHIRKY 691

[Close]
BLAST of CmaCh08G006500 vs. TAIR 10
Match: ATCG00190.1 (RNA polymerase subunit beta )

HSP 1 Score: 78.6 bits (192), Expect = 3.1e-15
Identity = 37/51 (72.55%), Postives = 39/51 (76.47%), Query Frame = 0 

Query: 39  GRCCFSGELALVKTVLVAYMPWEGYNSEDAVLISERLVYEDIYTSFHVHGY 90
           G     GELAL K +LVAYMPWEGYN EDAVLISE LVY DIYTSFH+  Y
Sbjct: 643 GAATVGGELALGKNILVAYMPWEGYNFEDAVLISECLVYGDIYTSFHIRKY 693

The following BLAST results are available for this feature:
BLAST of CmaCh08G006500 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8S8X91.2e-1680.39DNA-directed RNA polymerase subunit beta OS=Atropa belladonna OX=33113 GN=rpoB P... [more]
Q06RD91.2e-1680.39DNA-directed RNA polymerase subunit beta OS=Jasminum nudiflorum OX=126431 GN=rpo... [more]
Q3C1G71.2e-1680.39DNA-directed RNA polymerase subunit beta OS=Nicotiana sylvestris OX=4096 GN=rpoB... [more]
Q33C461.2e-1680.39DNA-directed RNA polymerase subunit beta OS=Nicotiana tomentosiformis OX=4098 GN... [more]
Q2MIJ51.2e-1680.39DNA-directed RNA polymerase subunit beta OS=Solanum bulbocastanum OX=147425 GN=r... [more]
BLAST of CmaCh08G006500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7H0R3B39.2e-1580.77DNA-directed RNA polymerase subunit beta OS=Oberonioides microtatantha OX=155982... [more]
H2F6Q41.2e-1479.25DNA-directed RNA polymerase subunit beta OS=Scadoxus cinnabarinus OX=112577 GN=r... [more]
G0Y3981.6e-1482.35DNA-directed RNA polymerase (Fragment) OS=Sisyrinchium striatum OX=59001 GN=rpoB... [more]
A0A0S2IFG31.6e-1482.35DNA-directed RNA polymerase subunit beta OS=Cucurbita moschata OX=3662 GN=rpoB P... [more]
A0A0S2IE411.6e-1482.35DNA-directed RNA polymerase subunit beta OS=Cucurbita argyrosperma OX=34294 GN=r... [more]
BLAST of CmaCh08G006500 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF3625926.13.8e-1577.97hypothetical protein FXO37_30605 [Capsicum annuum][more]
YP_009996519.11.9e-1480.77RNA polymerase beta subunit [Oberonioides microtatantha] >QNQ65996.1 RNA polymer... [more]
AEX94337.12.5e-1479.25RNA polymerase beta subunit [Scadoxus cinnabarinus][more]
AEJ90756.13.3e-1482.35RNA polymerase beta subunit, partial [Sisyrinchium macrocarpum subsp. macrocarpu... [more]
YP_009175759.13.3e-1482.35RNA polymerase beta subunit [Astragalus mongholicus var. nakaianus] >ALH42737.1 ... [more]
BLAST of CmaCh08G006500 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG00190.13.1e-1572.55RNA polymerase subunit beta [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 51..85
e-value: 1.7E-17
score: 64.4
IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainPFAMPF00562RNA_pol_Rpb2_6coord: 8..88
e-value: 7.1E-15
score: 55.0
NoneNo IPR availableGENE3D2.40.50.100coord: 38..50
e-value: 1.7E-17
score: 64.4
NoneNo IPR availablePANTHERPTHR20856:SF20DNA-DIRECTED RNA POLYMERASE SUBUNIT BETAcoord: 38..89
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 31..89
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 38..89

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G006500.1CmaCh08G006500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0009507 chloroplast
molecular_function GO:0003677 DNA binding
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0032549 ribonucleoside binding