CmaCh08G006380 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh08G006380
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionENT domain-containing protein
LocationCma_Chr08: 3615722 .. 3620143 (-)
RNA-Seq ExpressionCmaCh08G006380
SyntenyCmaCh08G006380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTACAGCCCAAGCCCAGATTTAAAACTGATGCCATTACCGTATCCCATTTGGTTTAGGAATTTAAACTTGTTTATAATTTACTCTTTGCTCATAAATTCCTCCAAAAAGGTTTTTCTTTTTTTCACTCAATTTGAAGAATTTATTTACAAGATTCACAACATTGTCATACTCCGCTCCTTTCTTCTCTCGAGGTATCGATCGCTTTCTATACCTCTTAATGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGATTTCATTTTACCCTTGAATCAATCGAATTCAGCTTTGTGTTCACTTTAATTCCGCATTTGACTTCTTTTGATTCCGTCAGTTTTCTACGTTGATTTCCTTTTCCAGGTTTGGAGTTTTGTTCTTCTGTTTGAATTTGGAAGTTTCTTTTCTCGTCTGCTTAGTGTAGAAGAATTCTGTAGTTATTGTGCTTTCTGTATGTTGATTACTACTGTTTTTTTGTTTTGTCTCGTTTCGTTCGTGGACTTTTGGGTTGCTGAATGAGTGAAAAGCATTTTTTGTTTTTTAATCTTTACAGGCTTGCAATCTGTGTTTAGAATTAGGATCTTTGGAAGTATGAGACTAAGGAAGGGGGATCAAGTTGAGGTTTATAGCCAGGAGGAGGTTTCGAGTGGTTCATGGAGTTGTGCTGAAATTGTTTCCGGTAATGGCCGTACGTATAGCGTAAGATATTTTCAGACGGAGGAAGCGGTGGAGAAGGTGCCGAGGTGGGCGATAAGGCCCTGTCCTCCACCCGTAGAAGGACCAAATGTTTGGGCTGCTGGTGATCTTGCTGAAGCGTTCCACAATTCCTCCTGGAAACAAGCAAGAATAATGCAGATCATTGGGGTTAATTGCTATCTAGCAAGACTACTTGGATCACCATTAGATGTTTTGGTTAGCCAATCTTATTTGAGATTGCGACAGGCATGGCGCGACGGCCAATGGTTTCTCCTAGGAAAGGTAAATTTCCTAACAACAATTTTCTTGCAACCCTTTTCCTTATTATACTTTATTTACAAATGCATTTTTTTTTATTTCTGTTTTATTGATTTACTGTGCTTTGTATGCATGCCTTGTGTTACATCTTTCTTCCGTGTGCATAATGAAAAATCCAGGCATGCCGCAGTCCAGTTTGTGCTTGAAACAGTTATTGAACCATCATCTCATAGGTTATTTCTTGGACAGGCCTTTGAAGATTTGGGTTCATTGCCTGGAAATAAGCAGACAGTTCCAGACATGGTGAAAAGTAAGGTTCAACAGCTAGCAACGGCTCTTCCTACCAGACATCAGAGAAGGCCTTTGCTTGAAAAGTCCAAAAAACACACAGTGTCTATCCTGAAAAGGAAAATCACTAAGAAAGATGTTACGCATTTGCCTTCTTTAGCAAAAACTACTAAACTGTGCTTAACACGAGAGTTGAGTAGGGTTAGATTGAGCTCCACCTTTCCTGCTGTAAATACCGAAGTTGCTACAGGTTATGTTGGTTTGAGAGAGGACAACCTTATTCCAAGAACCTCAAATTACATTCACACAGTTAGCTGTGCTTCCTCTGTTGGTAGTAATAATTCCACTGATGATTTTTTCAAGGTGCCATTTAATTCTGTAGCTCGTAGTAAACAAGTTGAGGATGAAGATTATTGCAGTGATGCTGAATCATTTACAGGAAGAGGACATGAGGAAGAAAATTCATGCTCCGATGAGGATGTATCGGTTGGATTCCACAGGTCAGAGCTAAGTGTATTTCGTTCTTTTATTAGGGTATTGTATGCTTCAGGACCTTTAAGTTGGGAAGATGAAGGACAGGTTTCAAGCATTCGTGCTTCACTCCACATATCAAATGATGAATATTTGACGGAGCTGAAAAATCTAATGTCTGCTGCTAAAAAGACATCTGTATGATTGATTGGAGCATTTATTCTTTGTTTCGAATTCTTACTTCTGTATCCCTTGATATCATTCTATGGGTAAGTTTCACTGTGCATCATTGAATTAGAAGTTTGGGAAGCACCCAATTGATTTGTACAAACCATTCAGAAATGAGAATTGCTCTTCGTTCTTAATGATCCTTAAGCTTTTTGTCATATCAATGTCACTCTTTTGTTTCACTGGACTGCTCTGTTTGGTAGCGCTAGGTTTCAAAATAGAGTATGCTATACTGTAAAGATTTTTCAAGAGTTATTCTCCATAAATGAATTTTGTCCTCTTCATGTGAAGGTTCTTACATTTCCTCTTATCTGCTCTGGGTCTACAGTGTACTATTGTGTTGTATACATTCTAATCCTATAATGTCCTCAGCAGCCTATGCGCTTCATTTGAGGAAAATATGGGTACCTTCCCTTGTTATGACATGGAATAACTTGGAGGCTTTGAGGGCTTTCTCAAGACGGTGGCTGTGGATTATACTTGGCTCCTTTTTCCATGTAGACCATGGGATATCACATCCAAATTCTTGCAAATATGCTTACGGCAAGCCATTTGATGAGTAATCCCTAGCTTTTTTATGCTTTTATTGGAGTCTAGTTTAATTTATGTGCGATATCAGTAGAAATGCAAGTTGCTAACTGAAATAAATGAACTTTATGAAGAAAGAAGAAAACCTAAAAGCTCCTGAGTTATTCTGAAAACCTAAAAGCCCCCGAGTTATTCTGAAAACCAGATAGAAGTAAATTTTCTGTAGGTTGCAATTACTATGTGCCCTTCTCTTATCTTTGATTTCAAACATGACACTCATCCATATTTTCGTACACTTCGGGTCATTTAGAAACCTAAAGGTTGAAATTATCTCTTGATGATGTTGATGAAACAAAGTATAAGCCTGCAGTTGAGGAATGTGTGTTCATTTTTTTTTTTACGACGAAAGAAAACGTTTATGCTGTAGAAATTTGTATACGGAATGACATTGTGGCTAAGATATTTTCAGGTGAAAGGGGCAAAGGCTGTGATGACCAATACTTGTCCCCATCAAACTGCAAAACTGAAGTGATGAAGAGACATTTTATTTGTTTATCTGCAATCAATCAAAAAATAGCTGATAATTTTGTTGTTGAACAGAGGTAGCCTTGATCTTTCATATTCTTCTTCTGATCAGTTTGCAAAGGAACTGGATAAGGAGAAGAATAGTAGATCTAAGTAACTATCAGGCCTTAAATGCTTGTTATTTCTTTGACATTGTTGTTAGGAAAGGCTTTGGATGATTTGAATTTAACTTCTTTGTAAATAATGATGTAGCTTTTCTACCTCTTATCAGTTAATGAAGCGGCTGAGCAACTCAAAATGAAGATTGAGCTTCAAAATTCAAGGAGAGAATGCTCAGCTTCTCATTGCTGCAGACAAGCTTCAGGCCGGAGTCTGCGGCTGATGCCGGTGAAGGAAGGAGCTAATTTAGACCTCGTGCTTTTACACAGGCAAAGTGCTTCCTTCTCCACCACTGCTTATACATATCATAGCTATAAACTCTCTTGCATATGACTTCTCTTATATTATTTGACATAGAATTACATCAAGAATCATTCTAGAAGGCATATATTGTTGAGTTTTTATTGCTGTTGCGATCATCTGATTAGTTGAATGTAAGGAAATCATCTTTGAATCAAATTTATCAATGAATTAAGCAAAAGTGATTACAACTCTAAATTGTTTTGTGTATTTATGCATGTTACATTGTGGTTAAAGAACACTTTTGGTCTCTATTCTTTTATCGATCTATTGTGAAAAGTATGTTAAGATTTAGTTGAAATTCTTACATATACACATGAATGAACTGATTATGGACAAAAATATGTCTATAAATTATAAAAACTAAACAAAAATGTGTTCGTCTAGGCAAGATATGATTTATTCTTCCAAAACCAACTTCATATAGTAGTAGTACTTGTCTGCATTGACAAGTGTTCTTGGTTCTGCAAAAAAAGAATAATAATAATAATAATAATTTAAACTTGCTGGAATTACATAGAATAAAATACTAAAACTGGAAGCAACACTAATTTTGGGAATTTCTCATATGAATTATTTCCTACTGATTCAATTGTATCAATTTTCTCTTTAGAGATTCAGAAAAATTAGCACAGGGAAATTCGTTTCCACGTTCTTTCCTTGATGCTTGGTGGAAGTTGTTGACTAGGTGCTGAGGCATAGACAGGTTTGAGACCAATCGTCTTTCATGCCACATTGGTTACGACACTTTTGAAATTCTTATGATCAATCATTATTTGTAGTTTTAAATTTTAAAACATCTTGACGACTATTATGAAATGAATTAATACTTGTTTCTCAACTGTTGTGACTTGGGACATTTGCTTCATAGAATGATGTTGCTCCAATTGTTCACGATTCACGAATTCTTTATATTACGTAACTCTTTATTTTGTTTAGTTATAAAAGAGTACGACGTAAGTTTATAG

mRNA sequence

ATGGGCTTGCAATCTGTGTTTAGAATTAGGATCTTTGGAAGTATGAGACTAAGGAAGGGGGATCAAGTTGAGGTTTATAGCCAGGAGGAGGTTTCGAGTGGTTCATGGAGTTGTGCTGAAATTGTTTCCGGTAATGGCCGTACGTATAGCGTAAGATATTTTCAGACGGAGGAAGCGGTGGAGAAGGTGCCGAGGTGGGCGATAAGGCCCTGTCCTCCACCCGTAGAAGGACCAAATGTTTGGGCTGCTGGTGATCTTGCTGAAGCGTTCCACAATTCCTCCTGGAAACAAGCAAGAATAATGCAGATCATTGGGGTTAATTGCTATCTAGCAAGACTACTTGGATCACCATTAGATGTTTTGGTTAGCCAATCTTATTTGAGATTGCGACAGGCATGGCGCGACGGCCAATGGTTTCTCCTAGGAAAGGCCTTTGAAGATTTGGGTTCATTGCCTGGAAATAAGCAGACAGTTCCAGACATGGTGAAAAGTAAGGTTCAACAGCTAGCAACGGCTCTTCCTACCAGACATCAGAGAAGGCCTTTGCTTGAAAAGTCCAAAAAACACACAGTGTCTATCCTGAAAAGGAAAATCACTAAGAAAGATGTTACGCATTTGCCTTCTTTAGCAAAAACTACTAAACTGTGCTTAACACGAGAGTTGAGTAGGGTTAGATTGAGCTCCACCTTTCCTGCTGTAAATACCGAAGTTGCTACAGGTTATGTTGGTTTGAGAGAGGACAACCTTATTCCAAGAACCTCAAATTACATTCACACAGTTAGCTGTGCTTCCTCTGTTGGTAGTAATAATTCCACTGATGATTTTTTCAAGGTGCCATTTAATTCTGTAGCTCGTAGTAAACAAGTTGAGGATGAAGATTATTGCAGTGATGCTGAATCATTTACAGGAAGAGGACATGAGGAAGAAAATTCATGCTCCGATGAGGATGTATCGGTTGGATTCCACAGGTCAGAGCTAAGTGTATTTCGTTCTTTTATTAGGGTATTGTATGCTTCAGGACCTTTAAGTTGGGAAGATGAAGGACAGGTTTCAAGCATTCGTGCTTCACTCCACATATCAAATGATGAATATTTGACGGAGCTGAAAAATCTAATGTCTGCTGCTAAAAAGACATCTCTTTTCTACCTCTTATCAGTTAATGAAGCGGCTGAGCAACTCAAAATGAAGATTGAGCTTCAAAATTCAAGGAGAGAATGCTCAGCTTCTCATTGCTGCAGACAAGCTTCAGGCCGGAGTCTGCGGCTGATGCCGGTGAAGGAAGGAGCTAATTTAGACCTCGTGCTTTTACACAGGCAAATTATAAAAGAGTACGACGTAAGTTTATAG

Coding sequence (CDS)

ATGGGCTTGCAATCTGTGTTTAGAATTAGGATCTTTGGAAGTATGAGACTAAGGAAGGGGGATCAAGTTGAGGTTTATAGCCAGGAGGAGGTTTCGAGTGGTTCATGGAGTTGTGCTGAAATTGTTTCCGGTAATGGCCGTACGTATAGCGTAAGATATTTTCAGACGGAGGAAGCGGTGGAGAAGGTGCCGAGGTGGGCGATAAGGCCCTGTCCTCCACCCGTAGAAGGACCAAATGTTTGGGCTGCTGGTGATCTTGCTGAAGCGTTCCACAATTCCTCCTGGAAACAAGCAAGAATAATGCAGATCATTGGGGTTAATTGCTATCTAGCAAGACTACTTGGATCACCATTAGATGTTTTGGTTAGCCAATCTTATTTGAGATTGCGACAGGCATGGCGCGACGGCCAATGGTTTCTCCTAGGAAAGGCCTTTGAAGATTTGGGTTCATTGCCTGGAAATAAGCAGACAGTTCCAGACATGGTGAAAAGTAAGGTTCAACAGCTAGCAACGGCTCTTCCTACCAGACATCAGAGAAGGCCTTTGCTTGAAAAGTCCAAAAAACACACAGTGTCTATCCTGAAAAGGAAAATCACTAAGAAAGATGTTACGCATTTGCCTTCTTTAGCAAAAACTACTAAACTGTGCTTAACACGAGAGTTGAGTAGGGTTAGATTGAGCTCCACCTTTCCTGCTGTAAATACCGAAGTTGCTACAGGTTATGTTGGTTTGAGAGAGGACAACCTTATTCCAAGAACCTCAAATTACATTCACACAGTTAGCTGTGCTTCCTCTGTTGGTAGTAATAATTCCACTGATGATTTTTTCAAGGTGCCATTTAATTCTGTAGCTCGTAGTAAACAAGTTGAGGATGAAGATTATTGCAGTGATGCTGAATCATTTACAGGAAGAGGACATGAGGAAGAAAATTCATGCTCCGATGAGGATGTATCGGTTGGATTCCACAGGTCAGAGCTAAGTGTATTTCGTTCTTTTATTAGGGTATTGTATGCTTCAGGACCTTTAAGTTGGGAAGATGAAGGACAGGTTTCAAGCATTCGTGCTTCACTCCACATATCAAATGATGAATATTTGACGGAGCTGAAAAATCTAATGTCTGCTGCTAAAAAGACATCTCTTTTCTACCTCTTATCAGTTAATGAAGCGGCTGAGCAACTCAAAATGAAGATTGAGCTTCAAAATTCAAGGAGAGAATGCTCAGCTTCTCATTGCTGCAGACAAGCTTCAGGCCGGAGTCTGCGGCTGATGCCGGTGAAGGAAGGAGCTAATTTAGACCTCGTGCTTTTACACAGGCAAATTATAAAAGAGTACGACGTAAGTTTATAG

Protein sequence

MGLQSVFRIRIFGSMRLRKGDQVEVYSQEEVSSGSWSCAEIVSGNGRTYSVRYFQTEEAVEKVPRWAIRPCPPPVEGPNVWAAGDLAEAFHNSSWKQARIMQIIGVNCYLARLLGSPLDVLVSQSYLRLRQAWRDGQWFLLGKAFEDLGSLPGNKQTVPDMVKSKVQQLATALPTRHQRRPLLEKSKKHTVSILKRKITKKDVTHLPSLAKTTKLCLTRELSRVRLSSTFPAVNTEVATGYVGLREDNLIPRTSNYIHTVSCASSVGSNNSTDDFFKVPFNSVARSKQVEDEDYCSDAESFTGRGHEEENSCSDEDVSVGFHRSELSVFRSFIRVLYASGPLSWEDEGQVSSIRASLHISNDEYLTELKNLMSAAKKTSLFYLLSVNEAAEQLKMKIELQNSRRECSASHCCRQASGRSLRLMPVKEGANLDLVLLHRQIIKEYDVSL
Homology
[Close]
BLAST of CmaCh08G006380 vs. ExPASy Swiss-Prot
Match: O22897 (DUF724 domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=DUF6 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 2.7e-05
Identity = 38/133 (28.57%), Postives = 57/133 (42.86%), Query Frame = 0 

Query: 68  IRPCPPPVEGPNVWAAGDLAEAFHNSSWKQARIMQIIGVNCYLARLLGSPLDVLVSQSYL 127
           +RP PPP      +   D  E F  S W+Q  +  ++  NCY+  L+ +  + +V  S L
Sbjct: 213 VRPTPPPFP-VEKYELMDRVEVFRGSVWRQGLVRGVLDHNCYMVCLVVTKEEPVVKHSDL 272

Query: 128 RLRQAWRDGQWFLLGKAFEDLGSLPGNKQTVPDMVKSKVQQLATALPTRHQRRPL-LEKS 187
           R  + W DG W    K    + +     +T P    S  + +     T+H RR L LEKS
Sbjct: 273 RPCKVWEDGVWQDGPKQTPVIETPSNVMKTKPMRSCSGAKSMTPKRTTKHARRSLNLEKS 332

Query: 188 KKHTVSILKRKIT 200
            +       R  T
Sbjct: 333 AETLTKAESRAAT 344

[Close]
BLAST of CmaCh08G006380 vs. TAIR 10
Match: AT4G32440.1 (Plant Tudor-like RNA-binding protein )

HSP 1 Score: 167.2 bits (422), Expect = 3.1e-41
Identity = 137/381 (35.96%), Postives = 197/381 (51.71%), Query Frame = 0 

Query: 15  MRLRKGDQVEVYSQEEVSSGSWSCAEIVSGNGRTYSVRYF----QTEEAV-EKVPRWAIR 74
           MR+RKG +VEV+S +E   G+W CAEIVSGNG TY+VR++    + EEAV EKVPR  IR
Sbjct: 1   MRIRKGSRVEVFSNKEAPYGAWRCAEIVSGNGHTYNVRFYSFQIEHEEAVMEKVPRKIIR 60

Query: 75  PCPPPVEGPNVWAAGDLAEAFHNSSWKQARIMQIIGVNCYLARLLGSPLDVLVSQSYLRL 134
           PCPP V+    W  G+L E   N SWK A + + +  + Y+ RLLG+P ++   +  LR 
Sbjct: 61  PCPPLVDVER-WDTGELVEVLDNFSWKAATVREELSGHYYVVRLLGTPEELTFHKVNLRA 120

Query: 135 RQAWRDGQWFLLGKAFEDLGSLPGNKQTVPDMVKSKVQQLATALPTRHQ---RRPLLEKS 194
           R++W+D +W  +GK     GSL  +  T  D V  K+Q    ++P          LL++ 
Sbjct: 121 RKSWQDERWVAIGKI---SGSLKSSTLTGSD-VHQKLQPHRNSMPLHEPSVVSARLLKRP 180

Query: 195 KKHTVSILKRKIT--KKDVTHLPSLAKTTKL--CLTRELSRVRLSSTFPAVNTEVATGY- 254
             +  S      T   K +  L    +  K+     R  +R   S    ++N    TGY 
Sbjct: 181 SPYNWSECAESCTGNPKKMRSLEKEGQQQKVDAISCRPENRGGKSHVQASLNNH-KTGYC 240

Query: 255 --VGLREDNLIPRTSNYIHTVSCASSVGSNNSTD-DFFKVPFNSVARSKQVEDEDYCSDA 314
             V +R             + S   SVGS ++T  D   +P   +  S Q  D    SDA
Sbjct: 241 QIVRVRSKGFSESVRADDCSDSDVCSVGSCSATSYDESNMPPCMLDGSTQQAD-SCSSDA 300

Query: 315 ESFTGRGHEEE-NSCSDEDVSVGFHRSELSVFRSFIRVLYASGPLSWEDEGQVSSIRASL 374
           ES  G G E      S  D +    RSEL  +RS +  L++SGPLSWE E  ++ +R SL
Sbjct: 301 ESSCGLGEEPRWKHSSVGDGARNSCRSELYSYRSTLGELFSSGPLSWEQEASLTDLRLSL 360

Query: 375 HISNDEYLTELKNLMSAAKKT 379
           +IS+DE+L E++NL+S   ++
Sbjct: 361 NISDDEHLMEVRNLISTGTRS 374

[Close]
BLAST of CmaCh08G006380 vs. TAIR 10
Match: AT4G32440.2 (Plant Tudor-like RNA-binding protein )

HSP 1 Score: 160.2 bits (404), Expect = 3.8e-39
Identity = 134/370 (36.22%), Postives = 189/370 (51.08%), Query Frame = 0 

Query: 15  MRLRKGDQVEVYSQEEVSSGSWSCAEIVSGNGRTYSVRYF----QTEEAV-EKVPRWAIR 74
           MR+RKG +VEV+S +E   G+W CAEIVSGNG TY+VR++    + EEAV EKVPR  IR
Sbjct: 1   MRIRKGSRVEVFSNKEAPYGAWRCAEIVSGNGHTYNVRFYSFQIEHEEAVMEKVPRKIIR 60

Query: 75  PCPPPVEGPNVWAAGDLAEAFHNSSWKQARIMQIIGVNCYLARLLGSPLDVLVSQSYLRL 134
           PCPP V+    W  G+L E   N SWK A + + +  + Y+ RLLG+P ++   +  LR 
Sbjct: 61  PCPPLVDVER-WDTGELVEVLDNFSWKAATVREELSGHYYVVRLLGTPEELTFHKVNLRA 120

Query: 135 RQAWRDGQWFLLGKAFEDLGSLPGNKQTVPDMVKSKVQQLATALPTRHQ---RRPLLEKS 194
           R++W+D +W  +GK     GSL  +  T  D V  K+Q    ++P          LL++ 
Sbjct: 121 RKSWQDERWVAIGKI---SGSLKSSTLTGSD-VHQKLQPHRNSMPLHEPSVVSARLLKRP 180

Query: 195 KKHTVSILKRKIT--KKDVTHLPSLAKTTKL--CLTRELSRVRLSSTFPAVNTEVATGY- 254
             +  S      T   K +  L    +  K+     R  +R   S    ++N    TGY 
Sbjct: 181 SPYNWSECAESCTGNPKKMRSLEKEGQQQKVDAISCRPENRGGKSHVQASLNNH-KTGYC 240

Query: 255 --VGLREDNLIPRTSNYIHTVSCASSVGSNNSTD-DFFKVPFNSVARSKQVEDEDYCSDA 314
             V +R             + S   SVGS ++T  D   +P   +  S Q  D    SDA
Sbjct: 241 QIVRVRSKGFSESVRADDCSDSDVCSVGSCSATSYDESNMPPCMLDGSTQQAD-SCSSDA 300

Query: 315 ESFTGRGHEEE-NSCSDEDVSVGFHRSELSVFRSFIRVLYASGPLSWEDEGQVSSIRASL 368
           ES  G G E      S  D +    RSEL  +RS +  L++SGPLSWE E  ++ +R SL
Sbjct: 301 ESSCGLGEEPRWKHSSVGDGARNSCRSELYSYRSTLGELFSSGPLSWEQEASLTDLRLSL 360

[Close]
BLAST of CmaCh08G006380 vs. TAIR 10
Match: AT5G20030.1 (Plant Tudor-like RNA-binding protein )

HSP 1 Score: 156.4 bits (394), Expect = 5.5e-38
Identity = 118/367 (32.15%), Postives = 178/367 (48.50%), Query Frame = 0 

Query: 15  MRLRKGDQVEVYSQEEVSSGSWSCAEIVSGNGRTYSVRYFQTEEAVEKVPRWAIRPCPPP 74
           MR  KG +VEV S+  V SG+W  AEI+SGNG  Y+V Y    +  E+VPR ++RP PP 
Sbjct: 1   MRFNKGTKVEVLSKSSVPSGAWRSAEIISGNGHYYTVMY-DHNDGTERVPRKSMRPEPPR 60

Query: 75  VEGPNVWAAGDLAEAFHNSSWKQARIMQIIGVNCYLARLLGSPLDVLVSQSYLRLRQAWR 134
           ++  + W  GD+ E F + SWK A + +++G  C+L RLLGS L   V++S +R+RQ+W+
Sbjct: 61  LQVLDAWCPGDILEVFQSCSWKMAIVSKVLGNGCFLVRLLGSSLKFKVTKSDIRVRQSWQ 120

Query: 135 DGQWFLLGKAFEDLGSLPGNKQTVPDMVKSKVQQLATALPTRHQRRPLLEKSKKHTVSIL 194
           D +W ++G+                        +L+    T   RR +  K   +  S  
Sbjct: 121 DNEWIMIGQG---------------------TSRLSAQTSTGELRRKVNPKG-DYISSES 180

Query: 195 KRKITKKDVTHLPSLAKTTKLCLTRELSRVRLSSTFPAVNTEVATGYVGLREDNLIPRTS 254
           K K+ + DV     L K T   L    ++ R  + +P    E        RE        
Sbjct: 181 KDKLDESDVPLSVGLKKRT-YSLVEPHNQTRALAAYPPRFREEVKEEEEDRE-------- 240

Query: 255 NYIHTVSCASSVGS-NNSTDDFFKVPFNSVARSKQVEDEDYCSDAESFTGRGHEEENSCS 314
                 S ASSVGS    TD    V FN +      + E       S  G G  ++    
Sbjct: 241 ------SVASSVGSCCMDTDGLSAVSFNPIETGNSSDTE------SSSCGYGKVKKLVVP 300

Query: 315 DE-DVSVGFHRSELSVFRSFIRVLYASGP-LSWEDEGQVSSIRASLHISNDEYLTELKNL 374
            +   +   HR EL  +RS I  L+ASGP ++WE E  ++++R  L+ISN+E+L +++NL
Sbjct: 301 RKGSEAADVHRLELDAYRSSIERLHASGPIITWEQETWITNLRLKLNISNEEHLMQIRNL 323

Query: 375 MSAAKKT 379
           +S    T
Sbjct: 361 ISDDNST 323

[Close]
BLAST of CmaCh08G006380 vs. TAIR 10
Match: AT4G32440.3 (Plant Tudor-like RNA-binding protein )

HSP 1 Score: 131.7 bits (330), Expect = 1.4e-30
Identity = 73/165 (44.24%), Postives = 102/165 (61.82%), Query Frame = 0 

Query: 15  MRLRKGDQVEVYSQEEVSSGSWSCAEIVSGNGRTYSVRYF----QTEEAV-EKVPRWAIR 74
           MR+RKG +VEV+S +E   G+W CAEIVSGNG TY+VR++    + EEAV EKVPR  IR
Sbjct: 1   MRIRKGSRVEVFSNKEAPYGAWRCAEIVSGNGHTYNVRFYSFQIEHEEAVMEKVPRKIIR 60

Query: 75  PCPPPVEGPNVWAAGDLAEAFHNSSWKQARIMQIIGVNCYLARLLGSPLDVLVSQSYLRL 134
           PCPP V+    W  G+L E   N SWK A + + +  + Y+ RLLG+P ++   +  LR 
Sbjct: 61  PCPPLVDVER-WDTGELVEVLDNFSWKAATVREELSGHYYVVRLLGTPEELTFHKVNLRA 120

Query: 135 RQAWRDGQWFLLGKAFEDLGSLPGNKQTVPDMVKSKVQQLATALP 175
           R++W+D +W  +GK     GSL  +  T  D V  K+Q    ++P
Sbjct: 121 RKSWQDERWVAIGKI---SGSLKSSTLTGSD-VHQKLQPHRNSMP 160

[Close]
BLAST of CmaCh08G006380 vs. TAIR 10
Match: AT2G25590.1 (Plant Tudor-like protein )

HSP 1 Score: 127.9 bits (320), Expect = 2.1e-29
Identity = 64/135 (47.41%), Postives = 91/135 (67.41%), Query Frame = 0 

Query: 15  MRLRKGDQVEVYSQEEVSSGSWSCAEIVSGNGRTYSVRYFQTE----EAVE-KVPRWAIR 74
           MR R+G +VEV+S +E S G W  AEI+SGNG TY+VRY+  E    E VE +VPR  IR
Sbjct: 1   MRFRRGSRVEVFSIKEASYGVWRSAEIISGNGHTYNVRYYSFEIANNEVVEDRVPRKIIR 60

Query: 75  PCPPPVEGPNVWAAGDLAEAFHNS-SWKQARIMQIIGVNCYLARLLGSPLDVLVSQSYLR 134
           PCPP V+  + W AG+L E   N+ SWK A +++++    Y+ RLLG+  ++ V + YLR
Sbjct: 61  PCPPQVD-VDRWEAGELVEVLDNNISWKTATVLEVLSGRYYVVRLLGAKAELTVHKVYLR 120

Query: 135 LRQAWRDGQWFLLGK 144
            RQ+W+D +W ++GK
Sbjct: 121 ARQSWQDERWVMIGK 134

The following BLAST results are available for this feature:
BLAST of CmaCh08G006380 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
O228972.7e-0528.57DUF724 domain-containing protein 6 OS=Arabidopsis thaliana OX=3702 GN=DUF6 PE=2 ... [more]
BLAST of CmaCh08G006380 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G32440.13.1e-4135.96Plant Tudor-like RNA-binding protein [more]
AT4G32440.23.8e-3936.22Plant Tudor-like RNA-binding protein [more]
AT5G20030.15.5e-3832.15Plant Tudor-like RNA-binding protein [more]
AT4G32440.31.4e-3044.24Plant Tudor-like RNA-binding protein [more]
AT2G25590.12.1e-2947.41Plant Tudor-like protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014002Agenet domain, plant typeSMARTSM00743agenet_At_2coord: 79..135
e-value: 6.1E-4
score: 29.1
coord: 15..76
e-value: 7.0E-9
score: 45.5
IPR005491ENT domainSMARTSM01191ENT_2coord: 317..387
e-value: 6.7E-7
score: 38.9
IPR005491ENT domainPROSITEPS51138ENTcoord: 317..403
score: 10.529129
IPR008395Agenet-like domainPFAMPF05641Agenetcoord: 20..73
e-value: 1.5E-11
score: 44.6
IPR036142ENT domain-like superfamilyGENE3D1.10.1240.40ENT domaincoord: 311..425
e-value: 1.4E-10
score: 43.2
IPR036142ENT domain-like superfamilySUPERFAMILY158639ENT-likecoord: 313..387
NoneNo IPR availablePANTHERPTHR31917:SF63JHL25H03.10-LIKE PROTEINcoord: 15..201
NoneNo IPR availablePANTHERPTHR31917AGENET DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 15..201

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G006380.1CmaCh08G006380.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005634 nucleus