CmaCh08G005730 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh08G005730
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr08: 3265656 .. 3268312 (+)
RNA-Seq ExpressionCmaCh08G005730
SyntenyCmaCh08G005730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACCGTCAACCTTCTCATGCAGCCAGTAATCTAAACTTCCATTTTCCATGTACGAATACATTAGCAGCCGGCTGCCCTCATGCACACAGTAACCTTGAAGAGTAACCAGGTTCTGGTGTTTGGCTGCAGACAGAGCCTCTACCTCTGCTTTAAATTCCCTTTCCATCAGTCCCAAGTCTCCCGAGAGTTTCTTTACAGCAAGTCTCGTCCCGTTTGCTAATGTTGCTTTGTAAACCAATCCAAAACCACCGCAGCCAATTATGTTTTCTTGATTGAAATCACCAGTGGCCTTCATTATGTCAGAAATGGTAAGCTCCTTGATGTTGTTGGCGTTGTTTGGAAACAGAATGACTATGCTAGTGTTATTGTCAGCATTGTAATTAGAACTAATTGAAATTATGTCCAAATCTATTATGTCGGTATCCCCTCTTGGATCGATCCTCCTCTTGGATAATATCCATAACGCTAGCAGGGAGATGATGAGAGCCAAACCTAAACAGGTGCCCAAGACTAATCCAATTACAAGTTTTTTACTGGAGCTTTTATTTTGAGCGCTGGAATGAGTCACTTTAGTCTGGATAGGGCAAGAGCGCTGCACTATAGCAGGGCCACACAACCCTGAATTTCCTTCATAGCTAGAGCTAGGAAAGGTATTAAACTGACTCCCAGTTGGTATTGGTCCTTGAAGGTCGTTAAAGGCCACGCTAAACCTAGACAAGAAATGAAGTCCACTGAGAGAATGGGGGATTTCACCAGTTAGGTGGTTATGAGAGAGGTCTAATATCTCCAAGTTGCTGAGATTGGAAATTGTATCTGGTATGCTGCCGGAGAAGCTGTTGTTACTCAGGTCTAATGTATGTATAACCTTTAATTGCCCAATTTCCAAAGGAATAGGGCCACTTATGGTGTTGTTGCCCAGGTATAAAGATGGCGGAAGGCTGGAGAGGTGATTGTATTGCTGATTGGTAGCATTATTGGGTGCAACAAAGACGGGCAATGCAAGAAAACTCTGCTTTGCAGGATCGAGAATCTGCTGCGACATCAAAGCCTTCAGTCTGCAAAGCTGGATGGGGAATTTTCCGGAAATTCTATTATTAGACAAGTCAACATAAAACAGACTCGGCAAATCACCTAACCATTCTGGTATTGAACCAACAAGACGATTAAACGACAGGTCCAAGACCTCTAGATTCCTGAGCTTTTCTATCCATGAGGGTACTCTTCCAGTTAACTGACAAGCTCCAATAGCCAAAGCCTGGATATTTTGGAATGCGTTTGCATCTTCAATTATATCCCCATCCGGCAATGCTTCACCGTTATAACTACTGGAGAGGACGAGAGTTCCAAGGTTTCTGCAACCCATCAAACTCCTTAGTGCTCCACTTAAATTGGTTAGATTATTCTTGGAAACTGAAAGGAAGGACAGTGATTGAAGCGCTGCAATTTCTTGAGAAATCTCCCCAGAAAACTGATTACTAGCCAGTCTAACTGCCTTTAGAGACCTGCAGGAGTAAAGAGATGATGGTATACTACCTGTGAACATATTGTTGCCAAGGTCAAGTGTGGTGAGGCTAAGGAGGCGGGAGAAATTAACATTAGAGAGATCTCCCTGCAGCTTATTGACCCGCACATTCACCAAGGTCAGATTGGTGCAATTCATCAGTGATATGGGCAGAGTGCCTGTGAGATTGTTAATATGAAGCGATATCTGTTCCAGTCTGGAGAGCTTTCCAATATCCATTGGGATGGGGCCAATCAAAGAATTGGAGTACAATTCTAGGATTCTGAGGTTGGTGAGATTAACAATTCCCTCGCCAATGTTCCCCGAAAGATGATTAACATGTAAAGAAAGCTCCTTTAGAGAGAGAACATTGTAAAGGTCGGAGGGAATAGAACCAGTGAGACTATTGAAACTCGCTCGAAAAACCTCCAAATTGGGGCAGTTTCCCAGCCCCTGAGGTATTCCACGACTGAATTTATTATTGGAAAAGTCTAATAACCTGAGGGAGCTTATAGATGTAGTATTAACGCAAAAGGAGGTTGGGATGAGACCTGTGAAACTATTGTTGTTGACATTGAAACTGGTCAAACTCCCCGAGATTGCCACTTGCTGGATAAACGAAGCAGGTATTTCCCCAGAGAAACGATTGCTGGACAGATCCAGAGTCTCAATCACGAGTCCAGACGATGAAGGCTGCGGCGGGAACTGACCGGCGAGAAGGTTGTAGCTCAAATTCAAGAACTTGAGGCGACTCAGGGACGTAAAGAAATCGGAAGGTAGAGAACCGTCCAGACGATTATGGGAGAGATCGAGGTGAGAGAGAAAAGCAAGGTTTGTGAGAGATGAAGAGAATTCACCACGAAGACCTCTAGAAGGCAACAAAAGCTTGGTGACTCGGTTGTCATCGCTATTTGCGATAGCTTCACAACTGACTCCTTCCCAGAAACAGCAATCAATCGAAGAAGACCAATTGAAAGACTGTGGAACAGAAGAAGAAGAAGAAGAATTGATGAAAGACCAGAGAGAATCGCGATCAGATGGATTACAAGAAGCTGAAACGGAAAAAGGAGGAAAGAATTGCAAAACCAGAAGGAGGGTCAAAACAAAGAGGTTGAGGAAGTTGAAATTAATGGAGAAATTGGGCACTAAAGGT

mRNA sequence

ATGCACCGTCAACCTTCTCATGCAGCCAGTAATCTAAACTTCCATTTTCCATGTACGAATACATTAGCAGCCGGCTGCCCTCATGCACACAGTAACCTTGAAGAATGGCGGAAGGCTGGAGAGGTGATTGTATTGCTGATTGGTAGCATTATTGGGTGCAACAAAGACGGGCAATGCAAGAAAACTCTGCTTTGCAGGATCGAGAATCTGCTGCGACATCAAAGCCTTCAGTCTGCAAAGCTGGATGGGGAATTTTCCGGAAATTCTATTATTAGACAAGTATTTCCCCAGAGAAACGATTGCTGGACAGATCCAGAGTCTCAATCACGAGTCCAGACGATGAAGGCTGCGGCGGGAACTGACCGGCGAGAAGAGAATTCACCACGAAGACCTCTAGAAGGCAACAAAAGCTTGGTGACTCGGTTGTCATCGCTATTTGCGATAGCTTCACAACTGACTCCTTCCCAGAAACAGCAATCAATCGAAGAAGACCAATTGAAAGACTGTGGAACAGAAGAAGAAGAAGAAGAATTGATGAAAGACCAGAGAGAATCGCGATCAGATGGATTACAAGAAGCTGAAACGGAAAAAGGAGGAAAGAATTGCAAAACCAGAAGGAGGGTCAAAACAAAGAGGTTGAGGAAGTTGAAATTAATGGAGAAATTGGGCACTAAAGGT

Coding sequence (CDS)

ATGCACCGTCAACCTTCTCATGCAGCCAGTAATCTAAACTTCCATTTTCCATGTACGAATACATTAGCAGCCGGCTGCCCTCATGCACACAGTAACCTTGAAGAATGGCGGAAGGCTGGAGAGGTGATTGTATTGCTGATTGGTAGCATTATTGGGTGCAACAAAGACGGGCAATGCAAGAAAACTCTGCTTTGCAGGATCGAGAATCTGCTGCGACATCAAAGCCTTCAGTCTGCAAAGCTGGATGGGGAATTTTCCGGAAATTCTATTATTAGACAAGTATTTCCCCAGAGAAACGATTGCTGGACAGATCCAGAGTCTCAATCACGAGTCCAGACGATGAAGGCTGCGGCGGGAACTGACCGGCGAGAAGAGAATTCACCACGAAGACCTCTAGAAGGCAACAAAAGCTTGGTGACTCGGTTGTCATCGCTATTTGCGATAGCTTCACAACTGACTCCTTCCCAGAAACAGCAATCAATCGAAGAAGACCAATTGAAAGACTGTGGAACAGAAGAAGAAGAAGAAGAATTGATGAAAGACCAGAGAGAATCGCGATCAGATGGATTACAAGAAGCTGAAACGGAAAAAGGAGGAAAGAATTGCAAAACCAGAAGGAGGGTCAAAACAAAGAGGTTGAGGAAGTTGAAATTAATGGAGAAATTGGGCACTAAAGGT

Protein sequence

MHRQPSHAASNLNFHFPCTNTLAAGCPHAHSNLEEWRKAGEVIVLLIGSIIGCNKDGQCKKTLLCRIENLLRHQSLQSAKLDGEFSGNSIIRQVFPQRNDCWTDPESQSRVQTMKAAAGTDRREENSPRRPLEGNKSLVTRLSSLFAIASQLTPSQKQQSIEEDQLKDCGTEEEEEELMKDQRESRSDGLQEAETEKGGKNCKTRRRVKTKRLRKLKLMEKLGTKG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..201
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..211
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 5.0

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G005730.1CmaCh08G005730.1mRNA