CmaCh08G005360 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGCCCTAGGTTCAGGCGCGAGCGAGAGCTTCTTTCCTTCTCCGAACGAACAATGAAGTGCGTGGAATTCGTTCTTTTTTCCACTTTCCATTTCCCTCCACTGCTTATATCTTATTCAAATCTTCTCTTACTTGTTTAATCAACCTTTTCAATCGTCTTTTCTTCCATTTTCCGCTTCTAACTTCGATCGCCATGTCTAAAAGGTGAGGTTCTGTTCTTTTGTTTCGATTTTGCTTCTTTCTATGTTCTTGTTGATTTTGTCTGGCAGATGCTTGTTTGTTCGTTTTCTCGTGTATTTTTAAAAGTTTTGATGATTTGATGGCAGATTACGCGCTTTTTTTTTTTTTTTTTTTTTTTTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTCTTGAATAGTATCTTCCGGTTCATGGTTTTCTTTTGTTTGGATGTACCTTCTCGAGTAATCTTGATCATGGTTCTTTGGTATGTGGTTTGATATTAGGTATAAACTATTTTGAGGGGCTGGGTGATCAAATATGTGGTTGGAAATGTTTGGTATTCGAGTTTTCACGAAAGCTGTTTTGTTTTGTGGTTGTTGTTGAGGCTGGACTTTGTGTTTTATGAAGTTTTGTTATTGTATATCTTGGAATTAACACGTTCTTAGCGTCTTAATTTACTTTGGTGGATTGTTTAGGGTTCTATGCAAGTATTTTGCGCATGGAGCATGCTTGAAAGGGGAGTATTGTGAGTTTTCGCATGACTGGACGGCTCCACCTAGCAATGTAAATATTACTTCCACTCCTCTGCATTGCTATGCATTTTAATGTAAACCAACTGTCAGTTTGGCACTCCTATCAATCTTTCTTTCTGATGTATCATTCGTGAAACAGGTTTGCACTTACTATCAAAAGGGAAGGTGTGCTTTTGGCAGTCGATGCAGATATGACCATGTTAAAGCTTCTCATGCAGAGTCATCCGCTTCTTCGAATTCTCAGCAACCTCACATGTCTGAATCTGTTTCAATAGCTCATACTCTATTATCAAGTCCACTTTCTCCTTCACCTGGGTCGACAATTGAGCTTGCTGGTTCAAAGATATCCTGTCTTCCCTCGCACGTTGAATCTGCTTGGAGTGTAGAGTGTGAGCTTCCATCTGGTCTTGATGATTGGGGGAGTAGGGAGACAAGGATTATTAGTCCAGCCGATTTACCTATTTGCTCTTTTTCTGCTGCTGGTACTAATTGTCCACGTGGTGATAATTGCCCTCACATTCATGGGGACTTATGTCCCACGTGCGGAAAACAATGTTTACATCCTTTTAGGACGGATGAAAGGGAGGAGCATATGAAGGCATGTGAGAAAAAGCAAAAACATCTTGAGTCTTTGAAACATAGCCAAGAAATAGAGTGCAGTGTCTGCCTCGAGCGTGTTCTTTCTAAAACCGAAATAGCCGAGAGGAAGTTTGGGCTTCTATCAGAATGTGATCATCCGTTCTGCATTTCTTGTATTAGAAACTGGCGTAATAGTTCATCTACCTCCGGAATGGATGTTAACAGTGCTTTAAGAGCCTGCCCAATTTGTAGGAAGCTATCATACTTTGTTATTCCAAGCGTCATTTGGTATTCTTCCAAGGAAGAAAAACAAGAGATTGTTGATAGCTACAAGTCAAAGCTGCGGTAAATTTATGTTCTTAATTCCTAATATTTGATTACATTCTGGATACTATTAAATTTTGTCCATTCTGTTCCTGTTTTTTATGTTTTATAACCAAACTCATTTTTATCTGTGCCATATCAAATGTAATCTGAAAATCTCCATAGTCCACAGGAATGATCAATATGCTTTCTAGAAGAATGGAAACTGCATAACTGCTCTAAAGTAATTGTGTGAGCTGTTGAAATAATTTCTGTACTCTGATCCTGCAACTTTATATTATTTTCATGCACAGATCAATCGATTGCAAGCACTTTAACTTTGGAAATGGGAACTGCCCATTTGGATCTAGTTGTTTTTACAAGGTAAATTTGTCTCTGAAATCATCTACTTCAGTTTTCTTATCCTGATTATGCTCTTCTAAGCAAGCTGGATGTTGCTGTGGCCTTTGGAATTGCAATTTTCCTGAAATTTTTTCTTCTTCCTTTTTTTTTCTCTATTCCTTTATCCATATTGCCTTTTAACCGATCATTGATATGCTGAATGGAAATCTCAACCTGTTTGGTTGTTCTAATATTTGAATGCCTGTGAAGTATGTTGATTAGTTACATCTTTGGTTTCGTGGACATGAGTTTACGGAAGGAATTCTTTCTGTGATCTGGAGACGGAAATATAGTGCAACGGAAGATTGTTTTTGTTCCTATGATCCTTCGATGGTTTTATAAGCGTCTCCATTTACCATGGCCATCCCAATCATGGTGGGGTAGATATGTGGAATCGTACTCAATTTTAACTTGCATGTTGACAAAGTAAATTTGCTGATCATTTGGCCAGCTTTTTCACTATGTTTTTGTTCAATTTTTTTTGCTATTAGGGTGCTCATAATAATAGACTACCAATATGATGAAAAATATATAAATTTCTGGTTCAGTGCCTCTTAGCGTGTTTCATTTTGTTCTTTTGACACATAATGGTAAGGGTGCCTCTTTCTTGTCTATTTTTTTTTTTTTAACAAAAAAACCCAAAGGATTCCTCCATTTCTCATAGGTATCTCTCTTGGGAAGCCCTGTCTCAGTTAAAATAGTTCGAGGGTGAGGACGAGGCATGAAGTCCCTTTCTTTTCTCCCACCTGTGTTCCTACTATAACCAAATCTCATAAATAATAACTTGCTTTGGTATATACTATAGATAATCTATATCCATTTTCTTTTTGTTTTCTGTTTCTAAAATTCATGCTTTATAACCAATATCACTGTTCTGTAATCTATTTTTAAAAAATCCTAAACAAATTATTTTTGGAAAGTAGATTTTAAAACTATGTTAATTGTGCTTGAGGGGAACTAAGAATTTAAAAGTGCTTTTAAAATGTGATAAACAAGAAAATGTATGATCTTAAAATTTACTTGAGTCTTTGAATAACAATTTTCTTTAGTCTTCAATTTAGTTTTGAGGATATTTTAAAAGCCTACTTTTTTTTTTTTTTTAATTAAAAACAAAATGTCAAGAAAATTTTTAATAGTTAAAAGAAAACCCTCCAAATTTTTGGTTTTATGTTTCTAAAATTTGGCTGAGAATTTTAAACTGGCTTTTGAAAAGCAGAAAACAAAAATACTAAACTAAGAAATGGTTGGTTAATTTTTGAAAATTTAAAATTCTATGTTTATTAAGCAAGGCCTAAGGTTTATCTACAAATGTCCATGTAATTTGTGGGGACAAGTTCACAAGTTCTCAAACAAAATCTTTGCAATTACTTTTGTTGCTGTCTTAGAAAATTTTCTGGGCTCAATCTGGCTGAAAGTGATGTGCTTACTACTTTGGCTGATTGGCTCTGCAACCTCTGTTTAGTGATGTCTTATCGGTCTTAGTTAAATTACCAATATGATGAAATTATTTAATTTTGCAATCCAATATTTTATTGCTAGACCTCCTATAGAAAAAAGAAAAAGAATGTATTGCTAGACCTGTTATAATTGGGTGAAGATAATGGACTTCTCTGTTTCAAATTAATAAAAGTAATATACTTACAGCTATTTGATTTAAAAGTGTTATCATGAGGATATTGTAGGTTAGCACCATAGAATTACTGGAGGGGCCTCTTCTAAATTGCGTTATTTTAATTAGAAAAACTGTTATTGGAATCATTCATCAGTTCTAAAGCCAATCCATATGCTTGCAAATCATCTGCGCGTGTCTATTTTGGAGAATAAATATGCAACTGCTCTGTCACATTCTTCTGTCTCCCAAAAACTTTCAGTCAGCTTTTGTGGTAAATGTTGAAAGATGTGGTAGACATAAGCAGTGCTGTTCATTGCGCATTCTGTTGTCATTTAATTTCATTAGAGCAGATTGGCTTTCCAGTCTTTTGATTGATACAATGTTTGTTGTGTTCCAGCACTTGGTCAAGCCTGGTTCATACACATGGAAATATCACAGGCCACCTCCGCACCGACCACGATCTCAGAGAACTCCTCCTAGCAGATCTAATATTGTGGATATGGATGCCTTTTTTGATATGTTTCAAGACTTAGAGGATTTGGATTTTAGTGCTGAAGATTTAGATTTTGAAGAGCTAACACCTTTGGAGATGGCATTTGTTCTAATGCAGTTGGGTTGTGAAGCCAACTTGTCAAGTGATGAGGAGAATTATAGTTTTTGAACTACATTTTTTATAGGTAGTTGTGCCTGATGTAAATTGGGTCTTTCACGAGTTCCTTTCTTGTCTTTGCCCAGATATTTGCTATTCTAGCATTTTTGGTCACATAGCAGTGCCCTACGTGCAAAAATACAGGCTCGTAGACTTTGTTAATTGTCACAAACGCCATTATTGGGGAATGATACTTCACGATAAGCTTTAGTCATTTGTCCTAGGGCAAATTAGTTGCTGAGTTACCAAGATGACGCTGATCTATATATGGGAGACCCCTTTTCGTTATGTGTAGATATTACTATGACTTCGGAAGTCTTGTATCTTACTGCTGGGAATTAGGAATATCTTTTACTTGCTATCTTTCATCATTCATAGATTTTATGCAGAGTTTTGTTTCACCCTCTTGCTTTCCCAAGCCAATTGTGGGCTCCTAATGTTTGATTTGGTGATTTCTTTGTTTGCAGTTGTGTGAAGTGTTTTTTTTCCTTCTCTTCGAATATTTGGTTTCTTTACTTTCCAAATCTTATATGTCATTTTCTGCCTTTGAAGTGTTTGCAATTCTGCCTTTTAGTCTGCTGTATTAACTTCAAATGAGATACAAATTTTGATGTGATTTTCTCATTGCAGCACGCACATCGGGATGGCCGGTTGGAAGAGGTAGCACTGCGTCACATTGGGAATCAAGACGGCCTCACTATTATAGCTAAAAACATTAGGTTTTGTTTTGTGCATTTGCTTGATATTGTCCATTTCTTGTGCAATTTCGCCTTTTATTAATTTGATGCTATTTCTAGGTTGTCCGACTTCCTTAGTGACTTGCATATCAGGTGA AAAAAGCCCTAGGTTCAGGCGCGAGCGAGAGCTTCTTTCCTTCTCCGAACGAACAATGAAGTGCGTGGAATTCGTTCTTTTTTCCACTTTCCATTTCCCTCCACTGCTTATATCTTATTCAAATCTTCTCTTACTTGTTTAATCAACCTTTTCAATCGTCTTTTCTTCCATTTTCCGCTTCTAACTTCGATCGCCATGTCTAAAAGGGTTCTATGCAAGTATTTTGCGCATGGAGCATGCTTGAAAGGGGAGTATTGTGAGTTTTCGCATGACTGGACGGCTCCACCTAGCAATGTTTGCACTTACTATCAAAAGGGAAGGTGTGCTTTTGGCAGTCGATGCAGATATGACCATGTTAAAGCTTCTCATGCAGAGTCATCCGCTTCTTCGAATTCTCAGCAACCTCACATGTCTGAATCTGTTTCAATAGCTCATACTCTATTATCAAGTCCACTTTCTCCTTCACCTGGGTCGACAATTGAGCTTGCTGGTTCAAAGATATCCTGTCTTCCCTCGCACGTTGAATCTGCTTGGAGTGTAGAGTGTGAGCTTCCATCTGGTCTTGATGATTGGGGGAGTAGGGAGACAAGGATTATTAGTCCAGCCGATTTACCTATTTGCTCTTTTTCTGCTGCTGGTACTAATTGTCCACGTGGTGATAATTGCCCTCACATTCATGGGGACTTATGTCCCACGTGCGGAAAACAATGTTTACATCCTTTTAGGACGGATGAAAGGGAGGAGCATATGAAGGCATGTGAGAAAAAGCAAAAACATCTTGAGTCTTTGAAACATAGCCAAGAAATAGAGTGCAGTGTCTGCCTCGAGCGTGTTCTTTCTAAAACCGAAATAGCCGAGAGGAAGTTTGGGCTTCTATCAGAATGTGATCATCCGTTCTGCATTTCTTGTATTAGAAACTGGCGTAATAGTTCATCTACCTCCGGAATGGATGTTAACAGTGCTTTAAGAGCCTGCCCAATTTGTAGGAAGCTATCATACTTTGTTATTCCAAGCGTCATTTGGTATTCTTCCAAGGAAGAAAAACAAGAGATTGTTGATAGCTACAAGTCAAAGCTGCGATCAATCGATTGCAAGCACTTTAACTTTGGAAATGGGAACTGCCCATTTGGATCTAGTTGTTTTTACAAGCACGCACATCGGGATGGCCGGTTGGAAGAGGTAGCACTGCGTCACATTGGGAATCAAGACGGCCTCACTATTATAGCTAAAAACATTAGGTTGTCCGACTTCCTTAGTGACTTGCATATCAGGTGA ATGTCTAAAAGGGTTCTATGCAAGTATTTTGCGCATGGAGCATGCTTGAAAGGGGAGTATTGTGAGTTTTCGCATGACTGGACGGCTCCACCTAGCAATGTTTGCACTTACTATCAAAAGGGAAGGTGTGCTTTTGGCAGTCGATGCAGATATGACCATGTTAAAGCTTCTCATGCAGAGTCATCCGCTTCTTCGAATTCTCAGCAACCTCACATGTCTGAATCTGTTTCAATAGCTCATACTCTATTATCAAGTCCACTTTCTCCTTCACCTGGGTCGACAATTGAGCTTGCTGGTTCAAAGATATCCTGTCTTCCCTCGCACGTTGAATCTGCTTGGAGTGTAGAGTGTGAGCTTCCATCTGGTCTTGATGATTGGGGGAGTAGGGAGACAAGGATTATTAGTCCAGCCGATTTACCTATTTGCTCTTTTTCTGCTGCTGGTACTAATTGTCCACGTGGTGATAATTGCCCTCACATTCATGGGGACTTATGTCCCACGTGCGGAAAACAATGTTTACATCCTTTTAGGACGGATGAAAGGGAGGAGCATATGAAGGCATGTGAGAAAAAGCAAAAACATCTTGAGTCTTTGAAACATAGCCAAGAAATAGAGTGCAGTGTCTGCCTCGAGCGTGTTCTTTCTAAAACCGAAATAGCCGAGAGGAAGTTTGGGCTTCTATCAGAATGTGATCATCCGTTCTGCATTTCTTGTATTAGAAACTGGCGTAATAGTTCATCTACCTCCGGAATGGATGTTAACAGTGCTTTAAGAGCCTGCCCAATTTGTAGGAAGCTATCATACTTTGTTATTCCAAGCGTCATTTGGTATTCTTCCAAGGAAGAAAAACAAGAGATTGTTGATAGCTACAAGTCAAAGCTGCGATCAATCGATTGCAAGCACTTTAACTTTGGAAATGGGAACTGCCCATTTGGATCTAGTTGTTTTTACAAGCACGCACATCGGGATGGCCGGTTGGAAGAGGTAGCACTGCGTCACATTGGGAATCAAGACGGCCTCACTATTATAGCTAAAAACATTAGGTTGTCCGACTTCCTTAGTGACTTGCATATCAGGTGA MSKRVLCKYFAHGACLKGEYCEFSHDWTAPPSNVCTYYQKGRCAFGSRCRYDHVKASHAESSASSNSQQPHMSESVSIAHTLLSSPLSPSPGSTIELAGSKISCLPSHVESAWSVECELPSGLDDWGSRETRIISPADLPICSFSAAGTNCPRGDNCPHIHGDLCPTCGKQCLHPFRTDEREEHMKACEKKQKHLESLKHSQEIECSVCLERVLSKTEIAERKFGLLSECDHPFCISCIRNWRNSSSTSGMDVNSALRACPICRKLSYFVIPSVIWYSSKEEKQEIVDSYKSKLRSIDCKHFNFGNGNCPFGSSCFYKHAHRDGRLEEVALRHIGNQDGLTIIAKNIRLSDFLSDLHIR Homology
BLAST of CmaCh08G005360 vs. ExPASy Swiss-Prot
Match: E0X9N4 (Putative RING-type E3 ubiquitin transferase C3H69 OS=Arabidopsis thaliana OX=3702 GN=At3g63550 PE=3 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 2.0e-136 Identity = 233/359 (64.90%), Postives = 286/359 (79.67%), Query Frame = 0
BLAST of CmaCh08G005360 vs. ExPASy Swiss-Prot
Match: Q5ZA07 (E3 ubiquitin-protein ligase makorin OS=Oryza sativa subsp. japonica OX=39947 GN=MKRN PE=2 SV=1) HSP 1 Score: 476.5 bits (1225), Expect = 2.7e-133 Identity = 238/368 (64.67%), Postives = 269/368 (73.10%), Query Frame = 0
BLAST of CmaCh08G005360 vs. ExPASy Swiss-Prot
Match: Q6IDS6 (E3 ubiquitin-protein ligase makorin OS=Arabidopsis thaliana OX=3702 GN=MKRN PE=2 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 2.4e-126 Identity = 219/358 (61.17%), Postives = 264/358 (73.74%), Query Frame = 0
BLAST of CmaCh08G005360 vs. ExPASy Swiss-Prot
Match: Q9ERV1 (Probable E3 ubiquitin-protein ligase makorin-2 OS=Mus musculus OX=10090 GN=Mkrn2 PE=1 SV=2) HSP 1 Score: 243.0 bits (619), Expect = 5.0e-63 Identity = 144/399 (36.09%), Postives = 206/399 (51.63%), Query Frame = 0
BLAST of CmaCh08G005360 vs. ExPASy Swiss-Prot
Match: Q4VBT5 (Probable E3 ubiquitin-protein ligase makorin-1 OS=Danio rerio OX=7955 GN=mkrn1 PE=2 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.1e-62 Identity = 132/346 (38.15%), Postives = 192/346 (55.49%), Query Frame = 0
BLAST of CmaCh08G005360 vs. TAIR 10
Match: AT3G08505.2 (zinc finger (CCCH-type/C3HC4-type RING finger) family protein ) HSP 1 Score: 453.4 bits (1165), Expect = 1.7e-127 Identity = 219/358 (61.17%), Postives = 264/358 (73.74%), Query Frame = 0
BLAST of CmaCh08G005360 vs. TAIR 10
Match: AT3G08505.1 (zinc finger (CCCH-type/C3HC4-type RING finger) family protein ) HSP 1 Score: 453.4 bits (1165), Expect = 1.7e-127 Identity = 219/358 (61.17%), Postives = 264/358 (73.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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