CmaCh08G005240 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh08G005240
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionCytokinin riboside 5'-monophosphate phosphoribohydrolase
LocationCma_Chr08: 3025662 .. 3028042 (-)
RNA-Seq ExpressionCmaCh08G005240
SyntenyCmaCh08G005240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATAAATGCAAAAGCTCCGAGGATTCCACAGAGCTATATATAAAGCTAAGGTTAGAGAGTGGATGATTAAGTTGAGGCCCATCATGTACTAAGAGGGGAAGGGATGCAGGACAACAAAATGATAAAAGCCAAGTTGTTAGTCAGAGACAGATGAACAGAAAAGGAAAGAGAATGGGTTCAAGTTTATTGCCATGAATTCCACAAGAATTCAAAGAGTGGGTCGCGTCTTGTTGGTGTCGAGACGATAAAAGGATGAGAAGATAGAGATCTCGTTAAAGCAGACGAGATTTTGTCTGACAGAAAGAAATAGCTAACTCACAAAATCAAAGGTTGTTGTCTCCTAATTCCTCTCAACTCTGTGTGTGTGTGTGTGTGTGTGTGAAGAATGGAGGGAACAGATTTATCTTCGACAACTGAACAGAAATTGGGAAGATTCAAAAGGGTGTGTGTATTCTGTGGCAGCAAAGCTGGATACAAGTCTACATATGCTGAAGCCACCATTGAACTTGGTAAAATACTGGTAATTTCTACATCAATCAATGGACTATACTATAATTACAAGTATTTATTCTATATTTTTTGCTCTTCTCGTTCTTCTTCAAGTTGTATGTAATGTTTTCCCACAAAAGTTGAAAGTCCTAATCTTTTCTTGGTTGTATCAGGTTCAGAGAAAAATAGACTTGGTTTATGGGGGAGGAAGTGTGGGCCTAATGGGTTTGATCTCTCAAACTGTGTTCTCTGGAGGCTGCCATGTACTTGGGTATGTTTTCATACAAATTTACATTTCTGTTTACCATGTTGCTAATTTTGTTGTTTCATTCATGATGTACAGAGTGATTCCCAAGGCACTTCAGATTCATGAGGTACCTTTTCTGCAAGTTTCCTTCCTAGGTCTTTTGGAATGTAAGCTGTTTTCTTTTTCTTTGTTAAATTAATGAAACCCCACTTGTAGATATCAGGAGAGACTGTCGGAGAAGTGAAAACAGTAGCAGATATGCACCAAAGGAAGTCAGAAATGGCAAAACATGCTGATGCATTTGTAGCTCTTCCAGGTTATTATAACAAATATAGACTGTGTGTGTATTTGCCCTGAAAATGGCTTGTTTCATTTACTTAACTGGCAGAAACTTAAAATCCGTTGAATTAGGTGGCTATGGAACCATGGAAGAATTGCTAGAGATGATAACTTGGGCTCAGCTAGGAATTCATGACAAGCCAGTAAGATATGGATTTTTATTGACAACTTTCTGGAAAAAAGAGTAAAGAATACGACAAAGATGGTTTTTCAGATCTCCATTCTTTACTTCCTTGGTTCATTCACAATTCCAACAGTGTTCTTGAGAACAACTAATAACAAAAAAACAAGAAACAGAGATGTGATTGGAGTGGTTTATTGTTATCTTGCCCTTTTATTGGTTTTGAAAAATGTGTTATCAGGTAGGATTGCTAAATGTAGATGGGTACTACGACAGCTTGCTTGCCTTATTCGACAAAGGAGTAGAGGAAGGTTTCATAGACAATGCAGCCAGGAAAATAGTGGTAATAGCAAACACAGCAGAGGAACTAATACAGACAATGGAGGTAGGAAGGGGAGAAGGTGCTCTATTAGAGGTTGCTGAATTATTGGTGGGAAACAGATTTTTGTCCGAAAAGGCACGAAAAGAAAGGATTACTCATTGTATTTTGGCTATGTTTTGCAGGAGTATGTGGCTGTCCATGACAAGGTTGCACCCAGACAAAGATGGGAAGTGGACCAATAATCAGAGTCTACTCAAAGTGGGCAATCCTTGAGATCTTAGATCTCAATCACCATCGAGCAAGCCATTTGTATAAATATCTGGGGTTGTGTGCTCAAATTTGATCAAGGGGATTACCAAAAGATAGACCAGATCTCTCTATCTCTCTCTCAAGATCCTCAATCTTGATCAATTATTTGTACATCCTTAAAGATGACCTGTATTAAATTCCACTAAGAATCAATGGAATAGTAAGATCTTTCTCTCTCATCAGGCCATTGACTAACTTAAAAAAGGCAAGGGAAAACAAGTTATACATGGTTAATGGTACAAAATAGGTGTCCAAAAGGCAATGAAAGAGAAGAAGACATTTTGGAGGGTAGGGATGCAAGGAGAAGAGACCCTCCAACTTGACCATTGTACCAATGGTGCAGCAAAGTTCATTATTACATTGTGATGTGTGGATAGCAGTATTTTGGATTTTGGGTCTTTATTCACTGAGCTGGGACCCTCCCTGCAGAGTGACCCATTTGTTTCCTAGTGGCTTCTTTTCTCTTCTCTTCTCCTCAATTTCTTTCCATTAATATGTTTATCAGACAATCTTTTCCTTCTCGTTAGTGCTGTCAAAAACACATTATGTTCCAG

mRNA sequence

AATAAATGCAAAAGCTCCGAGGATTCCACAGAGCTATATATAAAGCTAAGGTTAGAGAGTGGATGATTAAGTTGAGGCCCATCATGTACTAAGAGGGGAAGGGATGCAGGACAACAAAATGATAAAAGCCAAGTTGTTAGTCAGAGACAGATGAACAGAAAAGGAAAGAGAATGGGTTCAAGTTTATTGCCATGAATTCCACAAGAATTCAAAGAGTGGGTCGCGTCTTGTTGGTGTCGAGACGATAAAAGGATGAGAAGATAGAGATCTCGTTAAAGCAGACGAGATTTTGTCTGACAGAAAGAAATAGCTAACTCACAAAATCAAAGGTTGTTGTCTCCTAATTCCTCTCAACTCTGTGTGTGTGTGTGTGTGTGTGTGAAGAATGGAGGGAACAGATTTATCTTCGACAACTGAACAGAAATTGGGAAGATTCAAAAGGGTGTGTGTATTCTGTGGCAGCAAAGCTGGATACAAGTCTACATATGCTGAAGCCACCATTGAACTTGGTAAAATACTGGTTCAGAGAAAAATAGACTTGGTTTATGGGGGAGGAAGTGTGGGCCTAATGGGTTTGATCTCTCAAACTGTGTTCTCTGGAGGCTGCCATGTACTTGGAGTGATTCCCAAGGCACTTCAGATTCATGAGATATCAGGAGAGACTGTCGGAGAAGTGAAAACAGTAGCAGATATGCACCAAAGGAAGTCAGAAATGGCAAAACATGCTGATGCATTTGTAGCTCTTCCAGGTGGCTATGGAACCATGGAAGAATTGCTAGAGATGATAACTTGGGCTCAGCTAGGAATTCATGACAAGCCAGTAGGATTGCTAAATGTAGATGGGTACTACGACAGCTTGCTTGCCTTATTCGACAAAGGAGTAGAGGAAGGTTTCATAGACAATGCAGCCAGGAAAATAGTGGTAATAGCAAACACAGCAGAGGAACTAATACAGACAATGGAGGTAGGAAGGGGAGAAGGTGCTCTATTAGAGGAGTATGTGGCTGTCCATGACAAGGTTGCACCCAGACAAAGATGGGAAGTGGACCAATAATCAGAGTCTACTCAAAGTGGGCAATCCTTGAGATCTTAGATCTCAATCACCATCGAGCAAGCCATTTGTATAAATATCTGGGGTTGTGTGCTCAAATTTGATCAAGGGGATTACCAAAAGATAGACCAGATCTCTCTATCTCTCTCTCAAGATCCTCAATCTTGATCAATTATTTGTACATCCTTAAAGATGACCTGTATTAAATTCCACTAAGAATCAATGGAATAGTAAGATCTTTCTCTCTCATCAGGCCATTGACTAACTTAAAAAAGGCAAGGGAAAACAAGTTATACATGGTTAATGGTACAAAATAGGTGTCCAAAAGGCAATGAAAGAGAAGAAGACATTTTGGAGGGTAGGGATGCAAGGAGAAGAGACCCTCCAACTTGACCATTGTACCAATGGTGCAGCAAAGTTCATTATTACATTGTGATGTGTGGATAGCAGTATTTTGGATTTTGGGTCTTTATTCACTGAGCTGGGACCCTCCCTGCAGAGTGACCCATTTGTTTCCTAGTGGCTTCTTTTCTCTTCTCTTCTCCTCAATTTCTTTCCATTAATATGTTTATCAGACAATCTTTTCCTTCTCGTTAGTGCTGTCAAAAACACATTATGTTCCAG

Coding sequence (CDS)

ATGGAGGGAACAGATTTATCTTCGACAACTGAACAGAAATTGGGAAGATTCAAAAGGGTGTGTGTATTCTGTGGCAGCAAAGCTGGATACAAGTCTACATATGCTGAAGCCACCATTGAACTTGGTAAAATACTGGTTCAGAGAAAAATAGACTTGGTTTATGGGGGAGGAAGTGTGGGCCTAATGGGTTTGATCTCTCAAACTGTGTTCTCTGGAGGCTGCCATGTACTTGGAGTGATTCCCAAGGCACTTCAGATTCATGAGATATCAGGAGAGACTGTCGGAGAAGTGAAAACAGTAGCAGATATGCACCAAAGGAAGTCAGAAATGGCAAAACATGCTGATGCATTTGTAGCTCTTCCAGGTGGCTATGGAACCATGGAAGAATTGCTAGAGATGATAACTTGGGCTCAGCTAGGAATTCATGACAAGCCAGTAGGATTGCTAAATGTAGATGGGTACTACGACAGCTTGCTTGCCTTATTCGACAAAGGAGTAGAGGAAGGTTTCATAGACAATGCAGCCAGGAAAATAGTGGTAATAGCAAACACAGCAGAGGAACTAATACAGACAATGGAGGTAGGAAGGGGAGAAGGTGCTCTATTAGAGGAGTATGTGGCTGTCCATGACAAGGTTGCACCCAGACAAAGATGGGAAGTGGACCAATAA

Protein sequence

MEGTDLSSTTEQKLGRFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGLISQTVFSGGCHVLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEELLEMITWAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVGRGEGALLEEYVAVHDKVAPRQRWEVDQ
Homology
[Close]
BLAST of CmaCh08G005240 vs. ExPASy Swiss-Prot
Match: Q8RUN2 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis thaliana OX=3702 GN=LOG1 PE=1 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 1.2e-75
Identity = 140/207 (67.63%), Postives = 167/207 (80.68%), Query Frame = 0 

Query: 16  RFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGLISQTVFSGGCH 75
           +FKR+CVFCGS AG K +Y +A IELG  LV R IDLVYGGGS+GLMGLISQ VF+GG H
Sbjct: 6   KFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGGRH 65

Query: 76  VLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEELLEMIT 135
           V+GVIPK L   EI+GETVGEVK VADMHQRK+EMAKH+DAF+ALPGGYGT+EELLE+IT
Sbjct: 66  VIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVIT 125

Query: 136 WAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVG 195
           WAQLGIHDKPVGLLNV+GYY+SLL+  DK VEEGFI   AR I+V A +A+EL++     
Sbjct: 126 WAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKK---- 185

Query: 196 RGEGALLEEYVAVHDKVAPRQRWEVDQ 223
                 LE+YV  H+KVA ++ WE++Q
Sbjct: 186 ------LEDYVPRHEKVASKKSWEMEQ 202

[Close]
BLAST of CmaCh08G005240 vs. ExPASy Swiss-Prot
Match: Q7XDB8 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL10 PE=2 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.0e-74
Identity = 139/205 (67.80%), Postives = 162/205 (79.02%), Query Frame = 0 

Query: 16  RFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGLISQTVFSGGCH 75
           RFKR+CVFCGS  G K +Y +A IELG  LV R IDLVYGGGS+GLMGL+SQ VF GG H
Sbjct: 5   RFKRICVFCGSSQGKKRSYHDAAIELGNELVARSIDLVYGGGSIGLMGLVSQAVFDGGRH 64

Query: 76  VLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEELLEMIT 135
           V+GVIPK L   EISGETVGEV+ VADMHQRK+EMA+ +DAF+ALPGGYGT+EELLE+IT
Sbjct: 65  VIGVIPKTLMTPEISGETVGEVRPVADMHQRKAEMARQSDAFIALPGGYGTLEELLEVIT 124

Query: 136 WAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVG 195
           WAQLGIH KPVGLLNVDGYY+SLL   DK VEEGFI+ +AR+I+V+A TAEEL+      
Sbjct: 125 WAQLGIHHKPVGLLNVDGYYNSLLTFIDKAVEEGFINTSARRIIVMAPTAEELMDK---- 184

Query: 196 RGEGALLEEYVAVHDKVAPRQRWEV 221
                 LEEYV  HD+VA +  WE+
Sbjct: 185 ------LEEYVPYHDRVASKLNWEM 199

[Close]
BLAST of CmaCh08G005240 vs. ExPASy Swiss-Prot
Match: B9F166 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL2 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.5e-73
Identity = 142/225 (63.11%), Postives = 168/225 (74.67%), Query Frame = 0 

Query: 1   MEGTDLSSTTEQKL---GRFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGG 60
           ME  D  +T E  +    RF+RVCVFCGS  G K  Y +A IELGK LV R IDLVYGGG
Sbjct: 1   MEIKDEETTAEVAMVVQSRFRRVCVFCGSSHGKKKIYQDAAIELGKELVARNIDLVYGGG 60

Query: 61  SVGLMGLISQTVFSGGCHVLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAF 120
           SVGLMGL+SQ V +GG HV+GVIPK L   EISGETVGEVK V+DMHQRK+EMA+ +DAF
Sbjct: 61  SVGLMGLVSQAVHNGGRHVIGVIPKTLMPREISGETVGEVKAVSDMHQRKAEMARQSDAF 120

Query: 121 VALPGGYGTMEELLEMITWAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARK 180
           +ALPGGYGT+EELLE+I WAQLGIHDKPVGLLNVDGYY+ LL+  DK VEEGFI  +AR 
Sbjct: 121 IALPGGYGTLEELLEVIAWAQLGIHDKPVGLLNVDGYYNPLLSFIDKAVEEGFIRPSARH 180

Query: 181 IVVIANTAEELIQTMEVGRGEGALLEEYVAVHDKVAPRQRWEVDQ 223
           I+V+A T +ELI+           LEEY   H+KV  + +WE++Q
Sbjct: 181 IIVLAPTPKELIEK----------LEEYSPQHEKVVSKMKWEMEQ 215

[Close]
BLAST of CmaCh08G005240 vs. ExPASy Swiss-Prot
Match: Q8L8B8 (Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis thaliana OX=3702 GN=LOG3 PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 3.3e-73
Identity = 132/207 (63.77%), Postives = 164/207 (79.23%), Query Frame = 0 

Query: 16  RFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGLISQTVFSGGCH 75
           +F+R+CVFCGS  G KS+Y +A ++LG  LV R IDLVYGGGS+GLMGL+SQ V  GG H
Sbjct: 12  KFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRH 71

Query: 76  VLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEELLEMIT 135
           V+G+IPK L   E++GETVGEV+ VADMHQRK+EMAKH+DAF+ALPGGYGT+EELLE+IT
Sbjct: 72  VIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVIT 131

Query: 136 WAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVG 195
           WAQLGIHDKPVGLLNVDGYY+SLL+  DK VEEGFI   AR+I+V A TA+EL++     
Sbjct: 132 WAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKK---- 191

Query: 196 RGEGALLEEYVAVHDKVAPRQRWEVDQ 223
                 LEEY   H++VA +  WE+++
Sbjct: 192 ------LEEYAPCHERVATKLCWEMER 208

[Close]
BLAST of CmaCh08G005240 vs. ExPASy Swiss-Prot
Match: Q0JBP5 (Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza sativa subsp. japonica OX=39947 GN=LOGL6 PE=2 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 4.3e-73
Identity = 134/207 (64.73%), Postives = 163/207 (78.74%), Query Frame = 0 

Query: 16  RFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGLISQTVFSGGCH 75
           RF+R+CVFCGS  G K +Y +A +ELGK LV R IDLVYGGGSVGLMGL+SQ V++GG H
Sbjct: 26  RFRRICVFCGSSQGKKKSYQDAAVELGKELVARNIDLVYGGGSVGLMGLVSQAVYNGGRH 85

Query: 76  VLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEELLEMIT 135
           V+GVIPK L   EI+GETVGEVK VADMHQRK+EMA+ +DAF+ALPGGYGT+EELLE+I 
Sbjct: 86  VIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMARQSDAFIALPGGYGTLEELLEVIA 145

Query: 136 WAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVG 195
           WAQLGIHDKPVGLLNVDGYY+SLL+  DK VEE FI  +AR I+V+A T +EL++     
Sbjct: 146 WAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEEFISPSARHIIVLAPTPKELLEK---- 205

Query: 196 RGEGALLEEYVAVHDKVAPRQRWEVDQ 223
                 LE Y   HDKV P+ +WE+++
Sbjct: 206 ------LEAYSPRHDKVVPKMQWEMEK 222

[Close]
BLAST of CmaCh08G005240 vs. TAIR 10
Match: AT2G28305.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 284.3 bits (726), Expect = 8.6e-77
Identity = 140/207 (67.63%), Postives = 167/207 (80.68%), Query Frame = 0 

Query: 16  RFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGLISQTVFSGGCH 75
           +FKR+CVFCGS AG K +Y +A IELG  LV R IDLVYGGGS+GLMGLISQ VF+GG H
Sbjct: 6   KFKRICVFCGSSAGNKVSYKDAAIELGTELVSRNIDLVYGGGSIGLMGLISQAVFNGGRH 65

Query: 76  VLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEELLEMIT 135
           V+GVIPK L   EI+GETVGEVK VADMHQRK+EMAKH+DAF+ALPGGYGT+EELLE+IT
Sbjct: 66  VIGVIPKTLMPREITGETVGEVKAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVIT 125

Query: 136 WAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVG 195
           WAQLGIHDKPVGLLNV+GYY+SLL+  DK VEEGFI   AR I+V A +A+EL++     
Sbjct: 126 WAQLGIHDKPVGLLNVEGYYNSLLSFIDKAVEEGFISPTARHIIVSAPSAKELVKK---- 185

Query: 196 RGEGALLEEYVAVHDKVAPRQRWEVDQ 223
                 LE+YV  H+KVA ++ WE++Q
Sbjct: 186 ------LEDYVPRHEKVASKKSWEMEQ 202

[Close]
BLAST of CmaCh08G005240 vs. TAIR 10
Match: AT2G37210.1 (lysine decarboxylase family protein )

HSP 1 Score: 276.2 bits (705), Expect = 2.3e-74
Identity = 132/207 (63.77%), Postives = 164/207 (79.23%), Query Frame = 0 

Query: 16  RFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGLISQTVFSGGCH 75
           +F+R+CVFCGS  G KS+Y +A ++LG  LV R IDLVYGGGS+GLMGL+SQ V  GG H
Sbjct: 12  KFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRH 71

Query: 76  VLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEELLEMIT 135
           V+G+IPK L   E++GETVGEV+ VADMHQRK+EMAKH+DAF+ALPGGYGT+EELLE+IT
Sbjct: 72  VIGIIPKTLMPRELTGETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVIT 131

Query: 136 WAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQTMEVG 195
           WAQLGIHDKPVGLLNVDGYY+SLL+  DK VEEGFI   AR+I+V A TA+EL++     
Sbjct: 132 WAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPTAREIIVSAPTAKELVKK---- 191

Query: 196 RGEGALLEEYVAVHDKVAPRQRWEVDQ 223
                 LEEY   H++VA +  WE+++
Sbjct: 192 ------LEEYAPCHERVATKLCWEMER 208

[Close]
BLAST of CmaCh08G005240 vs. TAIR 10
Match: AT3G53450.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 274.2 bits (700), Expect = 8.9e-74
Identity = 134/218 (61.47%), Postives = 169/218 (77.52%), Query Frame = 0 

Query: 5   DLSSTTEQKLGRFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGL 64
           ++++ T QK  +F R+CVFCGS  G KS+Y +A ++LG  LV R IDLVYGGGS+GLMGL
Sbjct: 2   EVNNETMQK-SKFGRICVFCGSSQGKKSSYQDAAVDLGNELVLRNIDLVYGGGSIGLMGL 61

Query: 65  ISQTVFSGGCHVLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGY 124
           +SQ V  GG HV+GVIPK L   E++GETVGEV+ VADMHQRK+EMA+H+DAF+ALPGGY
Sbjct: 62  VSQAVHDGGRHVIGVIPKTLMPRELTGETVGEVRAVADMHQRKAEMARHSDAFIALPGGY 121

Query: 125 GTMEELLEMITWAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANT 184
           GT+EELLE+ITWAQLGIHDKPVGLLNVDGYY+SLL+  DK VEEGFI   AR+I++ A T
Sbjct: 122 GTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISTNARQIIISAPT 181

Query: 185 AEELIQTMEVGRGEGALLEEYVAVHDKVAPRQRWEVDQ 223
           A+EL++           LEEY   H+ VA +  WE+++
Sbjct: 182 AKELVKK----------LEEYSPCHESVATKLCWEIER 208

[Close]
BLAST of CmaCh08G005240 vs. TAIR 10
Match: AT5G11950.1 (Putative lysine decarboxylase family protein )

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-72
Identity = 134/212 (63.21%), Postives = 166/212 (78.30%), Query Frame = 0 

Query: 11  EQKLGRFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGLISQTVF 70
           + +  RF+++CVFCGS +G++  +++A IELG  LV+RKIDLVYGGGSVGLMGLIS+ V+
Sbjct: 3   DNQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVY 62

Query: 71  SGGCHVLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEEL 130
            GG HVLG+IPKAL   EISGETVG+V+ VADMH+RK+ MA+ A+AF+ALPGGYGTMEEL
Sbjct: 63  EGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEEL 122

Query: 131 LEMITWAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQ 190
           LEMITW+QLGIH K VGLLNVDGYY++LLALFD GVEEGFI   AR IVV A TA+EL++
Sbjct: 123 LEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELME 182

Query: 191 TMEVGRGEGALLEEYVAVHDKVAPRQRWEVDQ 223
            M          EEY   H  VA  + W+V++
Sbjct: 183 KM----------EEYTPSHMHVASHESWKVEE 204

[Close]
BLAST of CmaCh08G005240 vs. TAIR 10
Match: AT5G11950.2 (Putative lysine decarboxylase family protein )

HSP 1 Score: 270.4 bits (690), Expect = 1.3e-72
Identity = 134/212 (63.21%), Postives = 166/212 (78.30%), Query Frame = 0 

Query: 11  EQKLGRFKRVCVFCGSKAGYKSTYAEATIELGKILVQRKIDLVYGGGSVGLMGLISQTVF 70
           + +  RF+++CVFCGS +G++  +++A IELG  LV+RKIDLVYGGGSVGLMGLIS+ V+
Sbjct: 3   DNQRSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVY 62

Query: 71  SGGCHVLGVIPKALQIHEISGETVGEVKTVADMHQRKSEMAKHADAFVALPGGYGTMEEL 130
            GG HVLG+IPKAL   EISGETVG+V+ VADMH+RK+ MA+ A+AF+ALPGGYGTMEEL
Sbjct: 63  EGGLHVLGIIPKALMPIEISGETVGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEEL 122

Query: 131 LEMITWAQLGIHDKPVGLLNVDGYYDSLLALFDKGVEEGFIDNAARKIVVIANTAEELIQ 190
           LEMITW+QLGIH K VGLLNVDGYY++LLALFD GVEEGFI   AR IVV A TA+EL++
Sbjct: 123 LEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPGARNIVVSAPTAKELME 182

Query: 191 TMEVGRGEGALLEEYVAVHDKVAPRQRWEVDQ 223
            M          EEY   H  VA  + W+V++
Sbjct: 183 KM----------EEYTPSHMHVASHESWKVEE 204

The following BLAST results are available for this feature:
BLAST of CmaCh08G005240 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8RUN21.2e-7567.63Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 OS=Arabidopsis tha... [more]
Q7XDB81.0e-7467.80Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL10 OS=Oryz... [more]
B9F1661.5e-7363.11Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL2 OS=Oryza... [more]
Q8L8B83.3e-7363.77Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 OS=Arabidopsis tha... [more]
Q0JBP54.3e-7364.73Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL6 OS=Oryza... [more]
BLAST of CmaCh08G005240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G28305.18.6e-7767.63Putative lysine decarboxylase family protein [more]
AT2G37210.12.3e-7463.77lysine decarboxylase family protein [more]
AT3G53450.18.9e-7461.47Putative lysine decarboxylase family protein [more]
AT5G11950.11.3e-7263.21Putative lysine decarboxylase family protein [more]
AT5G11950.21.3e-7263.21Putative lysine decarboxylase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031100LOG familyPFAMPF03641Lysine_decarboxcoord: 62..192
e-value: 5.6E-43
score: 146.2
IPR005269Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGTIGRFAMTIGR00730TIGR00730coord: 18..193
e-value: 1.5E-57
score: 192.2
NoneNo IPR availableGENE3D3.40.50.450coord: 7..194
e-value: 7.8E-80
score: 268.9
NoneNo IPR availablePANTHERPTHR31223:SF51CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG4-RELATEDcoord: 10..222
NoneNo IPR availablePANTHERPTHR31223LOG FAMILY PROTEIN YJL055Wcoord: 10..222
NoneNo IPR availableSUPERFAMILY102405MCP/YpsA-likecoord: 16..192

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh08G005240.1CmaCh08G005240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009691 cytokinin biosynthetic process
cellular_component GO:0005829 cytosol
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005634 nucleus
molecular_function GO:0102682 N6-(Delta2-isopentenyl)-adenosine 5'-monophosphate phosphoribohydrolase activity