CmaCh08G005050 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCCTTTTGCTTCAAACCTTCAACAAGCACTGTTCCAAGTTCTACAATCATCACCATAGCCGCCATGGAAACAGAGCTTCGTTCTCTGTTTCGCTTCTTCAGGCCTTCGACGCTGAGGTCTCGTCTTGTCTGAATCAACTCCTGTTGTTGAGCTCCGATTCGACAACGTTGTCTTTTCATTGGCTTCTTCAGCTTCTTCAAGCTCTGCCTGTTCTCCATCGGGCTTTTTCCAAATTGGTTGTCGATTTAGACTGCCCTGTTGCGAAATGGGGCGCCGATTTGGTTGATGGGTATTTGAATTATAGTTTAAATTTGCTTGATCTTCTCAATTCCGTCAGTTTTTCTTTATCCCAACTGGGGAATTCGCGGCTTTCCCTTGCTTATGCTCTGAGTTTGGTTCGGAGCTCGCCGTTAATGGCGGTGGCCCGTCTGAAACCGATTGTTATGAAGAGGAATTTTGTGGGATTGGAAAACAGAGGAATTGTGGTTGATCGGAAGAAGAGTTGCTCCGGCGAGGAGTGGGCGATAGAGAGCGCGTTGGTGACAATGATGGGAATTGGGTATTGGGTCTGTGGGATTGTGATTTCTGGATGTGAGGGAGACTCGACGGCGTATTTGGAGATGAGAAGATTAGCCGCCGGCGTGACGGTTCCAGCGTTTAAAGAGTTGGATTCGGTAGTTTCCAAGAAGGGGAATGTGCCGGAGGAGGTGAAGGAGGTGAACTGTGCGGCGAAGGAGGTCGTCGGCAGCGGTGGCGGCGGCGATGGAGAGGCGGCGGAGGAGATGAGGAGGAGATTAGAGAGATTGGAGAAGGCGGTGGAGAGATTGGTGCAGGAGGTGGATGGAAGATTCTCGGAGATTCTCGACGGAAGAAGCCGATTGCTTGATGCTTTCAGACAACCCAAACATTAA ATGCTCCTTTTGCTTCAAACCTTCAACAAGCACTGTTCCAAGTTCTACAATCATCACCATAGCCGCCATGGAAACAGAGCTTCGTTCTCTGTTTCGCTTCTTCAGGCCTTCGACGCTGAGGTCTCGTCTTGTCTGAATCAACTCCTGTTGTTGAGCTCCGATTCGACAACGTTGTCTTTTCATTGGCTTCTTCAGCTTCTTCAAGCTCTGCCTGTTCTCCATCGGGCTTTTTCCAAATTGGTTGTCGATTTAGACTGCCCTGTTGCGAAATGGGGCGCCGATTTGGTTGATGGGTATTTGAATTATAGTTTAAATTTGCTTGATCTTCTCAATTCCGTCAGTTTTTCTTTATCCCAACTGGGGAATTCGCGGCTTTCCCTTGCTTATGCTCTGAGTTTGGTTCGGAGCTCGCCGTTAATGGCGGTGGCCCGTCTGAAACCGATTGTTATGAAGAGGAATTTTGTGGGATTGGAAAACAGAGGAATTGTGGTTGATCGGAAGAAGAGTTGCTCCGGCGAGGAGTGGGCGATAGAGAGCGCGTTGGTGACAATGATGGGAATTGGGTATTGGGTCTGTGGGATTGTGATTTCTGGATGTGAGGGAGACTCGACGGCGTATTTGGAGATGAGAAGATTAGCCGCCGGCGTGACGGTTCCAGCGTTTAAAGAGTTGGATTCGGTAGTTTCCAAGAAGGGGAATGTGCCGGAGGAGGTGAAGGAGGTGAACTGTGCGGCGAAGGAGGTCGTCGGCAGCGGTGGCGGCGGCGATGGAGAGGCGGCGGAGGAGATGAGGAGGAGATTAGAGAGATTGGAGAAGGCGGTGGAGAGATTGGTGCAGGAGGTGGATGGAAGATTCTCGGAGATTCTCGACGGAAGAAGCCGATTGCTTGATGCTTTCAGACAACCCAAACATTAA ATGCTCCTTTTGCTTCAAACCTTCAACAAGCACTGTTCCAAGTTCTACAATCATCACCATAGCCGCCATGGAAACAGAGCTTCGTTCTCTGTTTCGCTTCTTCAGGCCTTCGACGCTGAGGTCTCGTCTTGTCTGAATCAACTCCTGTTGTTGAGCTCCGATTCGACAACGTTGTCTTTTCATTGGCTTCTTCAGCTTCTTCAAGCTCTGCCTGTTCTCCATCGGGCTTTTTCCAAATTGGTTGTCGATTTAGACTGCCCTGTTGCGAAATGGGGCGCCGATTTGGTTGATGGGTATTTGAATTATAGTTTAAATTTGCTTGATCTTCTCAATTCCGTCAGTTTTTCTTTATCCCAACTGGGGAATTCGCGGCTTTCCCTTGCTTATGCTCTGAGTTTGGTTCGGAGCTCGCCGTTAATGGCGGTGGCCCGTCTGAAACCGATTGTTATGAAGAGGAATTTTGTGGGATTGGAAAACAGAGGAATTGTGGTTGATCGGAAGAAGAGTTGCTCCGGCGAGGAGTGGGCGATAGAGAGCGCGTTGGTGACAATGATGGGAATTGGGTATTGGGTCTGTGGGATTGTGATTTCTGGATGTGAGGGAGACTCGACGGCGTATTTGGAGATGAGAAGATTAGCCGCCGGCGTGACGGTTCCAGCGTTTAAAGAGTTGGATTCGGTAGTTTCCAAGAAGGGGAATGTGCCGGAGGAGGTGAAGGAGGTGAACTGTGCGGCGAAGGAGGTCGTCGGCAGCGGTGGCGGCGGCGATGGAGAGGCGGCGGAGGAGATGAGGAGGAGATTAGAGAGATTGGAGAAGGCGGTGGAGAGATTGGTGCAGGAGGTGGATGGAAGATTCTCGGAGATTCTCGACGGAAGAAGCCGATTGCTTGATGCTTTCAGACAACCCAAACATTAA MLLLLQTFNKHCSKFYNHHHSRHGNRASFSVSLLQAFDAEVSSCLNQLLLLSSDSTTLSFHWLLQLLQALPVLHRAFSKLVVDLDCPVAKWGADLVDGYLNYSLNLLDLLNSVSFSLSQLGNSRLSLAYALSLVRSSPLMAVARLKPIVMKRNFVGLENRGIVVDRKKSCSGEEWAIESALVTMMGIGYWVCGIVISGCEGDSTAYLEMRRLAAGVTVPAFKELDSVVSKKGNVPEEVKEVNCAAKEVVGSGGGGDGEAAEEMRRRLERLEKAVERLVQEVDGRFSEILDGRSRLLDAFRQPKH Homology
BLAST of CmaCh08G005050 vs. ExPASy Swiss-Prot
Match: Q9LMM6 (Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.9e-07 Identity = 39/119 (32.77%), Postives = 66/119 (55.46%), Query Frame = 0
BLAST of CmaCh08G005050 vs. ExPASy Swiss-Prot
Match: A2Z9A6 (UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2) HSP 1 Score: 56.2 bits (134), Expect = 7.4e-07 Identity = 74/266 (27.82%), Postives = 120/266 (45.11%), Query Frame = 0
BLAST of CmaCh08G005050 vs. ExPASy Swiss-Prot
Match: Q337C0 (UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 9.6e-07 Identity = 56/202 (27.72%), Postives = 91/202 (45.05%), Query Frame = 0
BLAST of CmaCh08G005050 vs. TAIR 10
Match: AT1G01550.1 (Protein of unknown function (DUF793) ) HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08 Identity = 39/119 (32.77%), Postives = 66/119 (55.46%), Query Frame = 0
BLAST of CmaCh08G005050 vs. TAIR 10
Match: AT1G01550.2 (Protein of unknown function (DUF793) ) HSP 1 Score: 58.2 bits (139), Expect = 1.4e-08 Identity = 39/119 (32.77%), Postives = 66/119 (55.46%), Query Frame = 0
BLAST of CmaCh08G005050 vs. TAIR 10
Match: AT2G46080.1 (CONTAINS InterPro DOMAIN/s: Protein BYPASS related (InterPro:IPR008511); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF793) (TAIR:AT1G01550.2); Has 153 Blast hits to 139 proteins in 20 species: Archae - 0; Bacteria - 2; Metazoa - 1; Fungi - 0; Plants - 150; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 8.9e-08 Identity = 68/307 (22.15%), Postives = 131/307 (42.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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