Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCAAAAATTGAAAGTTCAATGGTTATTTCATTTGTTCATCTTTCCATTCACCGAAAAGTTCAATTCTACGATCACTCCTCTGTTTCTGCCTTTTCTTTTCCACTTTCTTGACTTTACGATTATGTTCATTATAATTACTCATTAAGCTAACGCGTTCCAAAGCCATTACATTCCCCTTTCAATCTTGCATGAGTTCATGTGGCTTTCCATTCACTCCATCCCCCTTTCTTCTCACAAAATGTCTTGAATTGTGATTTTCTTCCTGTATTTTGAAATGGGTTTCGATTTCTGAGACGGGTTTGTTGCTTGGATTTTGTGGAGTGGTGAATATATATATATATATATTTGATAATGGGGGTCGTCACTGTTGCGGAGTTGAAGCCGAGTATTTCCGGGAAGAGATCGTTTCGTCCTAGTTCGAGTATAAGGCATGCGACTGAGTGGTAATCTCTTGTTCTAACTCTTGATTACCAGTTTTTTGATGATGGGTTTTTGTGTTGTCTGGTATATGTTTGATAAAATGCCATAGAGACTGTTTGGCTGTTTGGAAATCCTGGATCATGAGTGTTCTGTTGTGGAATTGAAATTCTGGTGACTTTTAGGAGCATTGAGTATTATTAGCTCTTACTTGTCTTCATATGTGTGGCATGTTGAAGATTTATGACTTCTTGTGCTAATTTTAAGTATTAGTTTGTTGTTTTATATGTTTCCTGAAGCATTTGATACCGAGTTGAGCATATACATCTATTTGAATTTGTGGCTAGGCTTTGGTGTTTTTGCTGTTGGAATTGGATGGTTCATGGGATTTTTTTTTTTTTCAAATCTAGTGTTGAACAAAGTATTAGTTCTTCTATTCGAGTTTAGATCCAACTTGATGAAAATTGGAAGTTATGCTCAAAATTGCTGAGTTATGTGAGATCCCACATTAGTTGGGGAGGAGAACGAAACGTTCTTTATAAGGGTATGGAAATCTCTCTCCAGTTGACGTGTTTTAAAAACTTTGAGGGGAAGCTGGAAAGGGAAAACTCAAAGAGGACAATATTTGCTAGAGGTGGGCTTGAGCTGTTACAAATGATATCGGAGCCAGGCTCTAAGCGATGTGTCAACGAGGAGGCTGAGCCCCAAAGAGAGGGTGGATTGGTGGGTCCCACATCGATTGGAGAAGGGAATGAGTGTCGGAGAGGGGGACTGTGAAATCCCACATCGGGTGGGGAGGAGAATGGAACATTCTTTATTATTAGGGTGTGGAAATTTCTCCCTAACAGACATGTTTTAAAAACCTTGAGAGGAAGCTCCGGAGATCATGATTTTTTGGGATGATGTAAAACAGCTCATTCCCTCCGGACTGTAATTTTTCATCAAGCTAAGCTCTGGTTCATAGAGCTTCAAAATTGTGGAAGAAAACAAGTTATGTTTGAAAATAACATAACCCATGAGGTTGACCTTGAACATCTTGAGACCAGGGGACAAGTTCACGAGGATTGGGGCTGATTGCTGTCTTTATTTGCTGCTTTATTATCAATTTGCTGAACTGCAATTCAGTTCTTTTCTAAATCAATTATTTTATAGCTTTGCTATCTCTTGTTTCTCTTGTAAGGACAGACAAATTGTACAACAGTAGACAGAGGATACATATTTTATGGCTTTATATTCTATAGGATGCTTTGCATTGATAGTTTCTTGGATCGAGGAACAACATAGCCCCGGCTGAGCGAATCAATCAACTTCAAAGTAGATTTGTTGTGCGAAGAGTGCGTTATGATCCGTGGCCGCTTGCCTGGTGGGGGTGGCTCTTCTGTTGTGGGTAAACGGGAAACCCGAATCTACAAACCCGAGATCATAAACTATAAGGAGCCTACTGCCAGTGGTTATCTCCGACCATATGGATACTGTTCATGTGTTCTGTTAATGAAGTTGGACTGAACTGTTCCTTCTACCTCCTTGAGATTCTAACTTTTTAGTGTGTATCAGGGTCAGATCCCACATCGGTTGGGGAGGAGAACGAAACATCCTTTACAAGGGTGTGGAAACCTCTCTTGAACAGACGCGTTTTAAAAACTTCGAGGGAAAACTGAAAAAAGACAATATCTACTAGCGGTAGGCTTAGGACTGTTACAATCAGCCTCCTTTGTTCCTTAATAATAGATCCATCATGCTCAGAGTGGGCCACTCTTCTTGTTTGATAATGTCGAGTATAGTGTTCTTGTCCATAATTTTGAGGTGCAGATAAAACCTTGTCATTTCATTCATGCAAAAGGAAAGTTTTCTTTTTATTTTCTTTTTGGCTGATGATAATCTTGGAAGGACCCTGCCAGTACTAACAATTAACAAGCATGTATGTTCATTTTTTCTTATTCATTTGGATGAGTCTTCTTGTTATCCTTATCGTTTCGTTTTCGTTTTAATCTTTCAAATCACAGGCCAATTTCTGATGTCTCTAGTGATCTCGCCATAGAAGTAGGCGGCTCGAGCTTTGCGCTTCACAAGGTATGGGAATTCGGTTTAAAAATCATTACAAATTTGAACTTGTGGTTGATTTTCATCAAGCTTTACTGATCATGCTTCTGGTCCTGGTTTGTTGCTTAGATAGGAGAGATTTTAAGAACCAAAACAATATTGTAGTAGTTTCCTTCAAGATCCACTCTTACAATTGCCAATACTTTGCAGTTTCCTTTAGTTTCTCGTAGCGGAAAGATACGAAAATTATTGTTGGAAGCAAAAGATTCGAAAACGTCCCGGGTTAACCTCTCTACTATTCCTGGTGGACCCGAGGCGTTCGAGCTAACTGCAAAGTTCTGTTATGGTATTAATGTTGAGATTACATTATCAAATGTTGCTATGTTACGTTGCGCTTCTCATTACTTGGAGATGACCGAGGAGTTCGCAGACAGAAACTTGGAAACCCGAACTGAATCGTACCTAAAGGATATGGTATTTCCAAATATATCGAACTCGATATCGGTTCTTCACCGGTGCGAAAGTTTATTACCTTTTTCAGAAGAGATCAATCTGGTAAGCAGACTCATTCATGCGATTGCTAGCAATGCATGCAAAGAGCAGCTGACTTCTGGCCTACTAAAGTTAGATCATAACTATCCGTCCAAAGCTGTTCATAACATCGAGCCAGAAACGCCATCGGATTGGTGGGGGAAGTCACTAACTGTGCTGAATCTCGACTTCTTCCAAAGGGTTCTATCAGCCGTGAAGTCGAAGGGTTTAAAACAGGATATGATCAGCAAGATTTTGATAAACTATGCTCATAATTCCCTTCAAGGCCTTGTTGTTAGAGACCATCATTTAGTGAAGGGAAGTTCCTTAGATTTGGAATTGCAAAGGAAGCAGAGGGTGATCGTTGAGACAATCGTGAGCTTGTTACCGACGCAGTCCCGAAAGAGCCCAGTTCCAATGGCATTCCTTTCAAGTTTGTTAAAAACAGCCATTACTGCTTCGGCTTCGACGTCTTGTAGATCGGACTTGGAGAGACGGATGGGCTTGCAATTGGACCAAGCTATTCTCGAGGACGTTTTAGTTCCTTCAATCACACATGGGATCAACCATAGCACTATGTATGATTCGGAATCAGTAGTGAGGATCTTCTCCATCTTTTTGAACTTGGACGAGGAAGACGACGACGAAGATAGTCACTTGAGAGATGAAAGCGAAATGATGTGTGATTTTGATAGTCCTGGTTCGCCTAAACAAAGTGCAATTCTCAAGGTTTCTAAGCTATTGGATAATTATTTAGCGGAAGTTGCACTCGACTCAAATTTGATGCCTTCAAAGTTCATAGCGTTAGCAGAACTACTTCCCGATCATGCTCGGGCCGTAAGTGATGGCTTGTACCGAGCTGTAGATATCTTTCTCAAAGTAAGCATCTCTCTCACTTATCTCTTCTGTGGCAGAACTTTTTGCAATGTGACAGCATAATTAATCTTCAAACCCGATCTTATTGTTCTTTGCAGGTTCATCCGAACATTAAAGACTCGGAACGTTACCGCCTTTGCAAAACCATCGACTGTCAGAAGCTATCTCAAGAAGCATGTAGCCATGCTGCACAAAATGAAAGGCTACCAGTGCAGATGGCAGTGCAAGTGCTATATTTTGAGCAAATCAGGTTAAGGAATGCAATGAATGGCAACCACAATCAGCTGTTTTTCGGTTCGACGAATGGTAGCCAATTTCCTCTACGATCGAGCAGTGGTGCAGGAAGTGGAGCCATCTCTCCACGGGACAATTACGCATCGGTTCGAAGAGAGAACCGTGAGCTGAAACTCGAAGTTGCTCGAATGAGAATGAGGCTTACAGACTTGGAAAAGGATCATGTTTCCATGAAGCAGGAGCTTGTAAAAACCCATCCTGCAAACAAGCTATTCAAATCATTCACCAAGAAGTTAAGTAAACTCAATGTTCTTTTCAGGATAAACAGCATCAAACCTATAGGGACGAAGAACAGTTCCGAAAACCGGTTCCCGTTTCAAAAACGGAGGCGACATTCGGTTTCGTGACTCTGAATCTATTGTATTTGTATGAGTTAAGTGAGAGTGTATAGTGTAAACTCAAATGTGATCGTCTAATATGAGGTTGATAGCTATTGAGTGTTGATTCTGGCGGTTGCTTTGTTCATTCTCAAATGCAGACATTCTAAGCTTGTGTTCTATATGTAAAGCCTGAATGTGTCACGGTTTCGAGCTCCAATTCAAGCTTCGAGCTCAGCTTATATTGGACATTTTTTTATGATTAGACTCTACAATTCTG
mRNA sequence
CCAAAAATTGAAAGTTCAATGGTTATTTCATTTGTTCATCTTTCCATTCACCGAAAAGTTCAATTCTACGATCACTCCTCTGTTTCTGCCTTTTCTTTTCCACTTTCTTGACTTTACGATTATGTTCATTATAATTACTCATTAAGCTAACGCGTTCCAAAGCCATTACATTCCCCTTTCAATCTTGCATGAGTTCATGTGGCTTTCCATTCACTCCATCCCCCTTTCTTCTCACAAAATGTCTTGAATTGTGATTTTCTTCCTGTATTTTGAAATGGGTTTCGATTTCTGAGACGGGTTTGTTGCTTGGATTTTGTGGAGTGGTGAATATATATATATATATATTTGATAATGGGGGTCGTCACTGTTGCGGAGTTGAAGCCGAGTATTTCCGGGAAGAGATCGTTTCGTCCTAGTTCGAGTATAAGGCATGCGACTGAGTGGCCAATTTCTGATGTCTCTAGTGATCTCGCCATAGAAGTAGGCGGCTCGAGCTTTGCGCTTCACAAGTTTCCTTTAGTTTCTCGTAGCGGAAAGATACGAAAATTATTGTTGGAAGCAAAAGATTCGAAAACGTCCCGGGTTAACCTCTCTACTATTCCTGGTGGACCCGAGGCGTTCGAGCTAACTGCAAAGTTCTGTTATGGTATTAATGTTGAGATTACATTATCAAATGTTGCTATGTTACGTTGCGCTTCTCATTACTTGGAGATGACCGAGGAGTTCGCAGACAGAAACTTGGAAACCCGAACTGAATCGTACCTAAAGGATATGGTATTTCCAAATATATCGAACTCGATATCGGTTCTTCACCGGTGCGAAAGTTTATTACCTTTTTCAGAAGAGATCAATCTGGTAAGCAGACTCATTCATGCGATTGCTAGCAATGCATGCAAAGAGCAGCTGACTTCTGGCCTACTAAAGTTAGATCATAACTATCCGTCCAAAGCTGTTCATAACATCGAGCCAGAAACGCCATCGGATTGGTGGGGGAAGTCACTAACTGTGCTGAATCTCGACTTCTTCCAAAGGGTTCTATCAGCCGTGAAGTCGAAGGGTTTAAAACAGGATATGATCAGCAAGATTTTGATAAACTATGCTCATAATTCCCTTCAAGGCCTTGTTGTTAGAGACCATCATTTAGTGAAGGGAAGTTCCTTAGATTTGGAATTGCAAAGGAAGCAGAGGGTGATCGTTGAGACAATCGTGAGCTTGTTACCGACGCAGTCCCGAAAGAGCCCAGTTCCAATGGCATTCCTTTCAAGTTTGTTAAAAACAGCCATTACTGCTTCGGCTTCGACGTCTTGTAGATCGGACTTGGAGAGACGGATGGGCTTGCAATTGGACCAAGCTATTCTCGAGGACGTTTTAGTTCCTTCAATCACACATGGGATCAACCATAGCACTATGTATGATTCGGAATCAGTAGTGAGGATCTTCTCCATCTTTTTGAACTTGGACGAGGAAGACGACGACGAAGATAGTCACTTGAGAGATGAAAGCGAAATGATGTGTGATTTTGATAGTCCTGGTTCGCCTAAACAAAGTGCAATTCTCAAGGTTTCTAAGCTATTGGATAATTATTTAGCGGAAGTTGCACTCGACTCAAATTTGATGCCTTCAAAGTTCATAGCGTTAGCAGAACTACTTCCCGATCATGCTCGGGCCGTAAGTGATGGCTTGTACCGAGCTGTAGATATCTTTCTCAAAGTTCATCCGAACATTAAAGACTCGGAACGTTACCGCCTTTGCAAAACCATCGACTGTCAGAAGCTATCTCAAGAAGCATGTAGCCATGCTGCACAAAATGAAAGGCTACCAGTGCAGATGGCAGTGCAAGTGCTATATTTTGAGCAAATCAGGTTAAGGAATGCAATGAATGGCAACCACAATCAGCTGTTTTTCGGTTCGACGAATGGTAGCCAATTTCCTCTACGATCGAGCAGTGGTGCAGGAAGTGGAGCCATCTCTCCACGGGACAATTACGCATCGGTTCGAAGAGAGAACCGTGAGCTGAAACTCGAAGTTGCTCGAATGAGAATGAGGCTTACAGACTTGGAAAAGGATCATGTTTCCATGAAGCAGGAGCTTGTAAAAACCCATCCTGCAAACAAGCTATTCAAATCATTCACCAAGAAGTTAAGTAAACTCAATGTTCTTTTCAGGATAAACAGCATCAAACCTATAGGGACGAAGAACAGTTCCGAAAACCGGTTCCCGTTTCAAAAACGGAGGCGACATTCGGTTTCGTGACTCTGAATCTATTGTATTTGTATGAGTTAAGTGAGAGTGTATAGTGTAAACTCAAATGTGATCGTCTAATATGAGGTTGATAGCTATTGAGTGTTGATTCTGGCGGTTGCTTTGTTCATTCTCAAATGCAGACATTCTAAGCTTGTGTTCTATATGTAAAGCCTGAATGTGTCACGGTTTCGAGCTCCAATTCAAGCTTCGAGCTCAGCTTATATTGGACATTTTTTTATGATTAGACTCTACAATTCTG
Coding sequence (CDS)
ATGGGGGTCGTCACTGTTGCGGAGTTGAAGCCGAGTATTTCCGGGAAGAGATCGTTTCGTCCTAGTTCGAGTATAAGGCATGCGACTGAGTGGCCAATTTCTGATGTCTCTAGTGATCTCGCCATAGAAGTAGGCGGCTCGAGCTTTGCGCTTCACAAGTTTCCTTTAGTTTCTCGTAGCGGAAAGATACGAAAATTATTGTTGGAAGCAAAAGATTCGAAAACGTCCCGGGTTAACCTCTCTACTATTCCTGGTGGACCCGAGGCGTTCGAGCTAACTGCAAAGTTCTGTTATGGTATTAATGTTGAGATTACATTATCAAATGTTGCTATGTTACGTTGCGCTTCTCATTACTTGGAGATGACCGAGGAGTTCGCAGACAGAAACTTGGAAACCCGAACTGAATCGTACCTAAAGGATATGGTATTTCCAAATATATCGAACTCGATATCGGTTCTTCACCGGTGCGAAAGTTTATTACCTTTTTCAGAAGAGATCAATCTGGTAAGCAGACTCATTCATGCGATTGCTAGCAATGCATGCAAAGAGCAGCTGACTTCTGGCCTACTAAAGTTAGATCATAACTATCCGTCCAAAGCTGTTCATAACATCGAGCCAGAAACGCCATCGGATTGGTGGGGGAAGTCACTAACTGTGCTGAATCTCGACTTCTTCCAAAGGGTTCTATCAGCCGTGAAGTCGAAGGGTTTAAAACAGGATATGATCAGCAAGATTTTGATAAACTATGCTCATAATTCCCTTCAAGGCCTTGTTGTTAGAGACCATCATTTAGTGAAGGGAAGTTCCTTAGATTTGGAATTGCAAAGGAAGCAGAGGGTGATCGTTGAGACAATCGTGAGCTTGTTACCGACGCAGTCCCGAAAGAGCCCAGTTCCAATGGCATTCCTTTCAAGTTTGTTAAAAACAGCCATTACTGCTTCGGCTTCGACGTCTTGTAGATCGGACTTGGAGAGACGGATGGGCTTGCAATTGGACCAAGCTATTCTCGAGGACGTTTTAGTTCCTTCAATCACACATGGGATCAACCATAGCACTATGTATGATTCGGAATCAGTAGTGAGGATCTTCTCCATCTTTTTGAACTTGGACGAGGAAGACGACGACGAAGATAGTCACTTGAGAGATGAAAGCGAAATGATGTGTGATTTTGATAGTCCTGGTTCGCCTAAACAAAGTGCAATTCTCAAGGTTTCTAAGCTATTGGATAATTATTTAGCGGAAGTTGCACTCGACTCAAATTTGATGCCTTCAAAGTTCATAGCGTTAGCAGAACTACTTCCCGATCATGCTCGGGCCGTAAGTGATGGCTTGTACCGAGCTGTAGATATCTTTCTCAAAGTTCATCCGAACATTAAAGACTCGGAACGTTACCGCCTTTGCAAAACCATCGACTGTCAGAAGCTATCTCAAGAAGCATGTAGCCATGCTGCACAAAATGAAAGGCTACCAGTGCAGATGGCAGTGCAAGTGCTATATTTTGAGCAAATCAGGTTAAGGAATGCAATGAATGGCAACCACAATCAGCTGTTTTTCGGTTCGACGAATGGTAGCCAATTTCCTCTACGATCGAGCAGTGGTGCAGGAAGTGGAGCCATCTCTCCACGGGACAATTACGCATCGGTTCGAAGAGAGAACCGTGAGCTGAAACTCGAAGTTGCTCGAATGAGAATGAGGCTTACAGACTTGGAAAAGGATCATGTTTCCATGAAGCAGGAGCTTGTAAAAACCCATCCTGCAAACAAGCTATTCAAATCATTCACCAAGAAGTTAAGTAAACTCAATGTTCTTTTCAGGATAAACAGCATCAAACCTATAGGGACGAAGAACAGTTCCGAAAACCGGTTCCCGTTTCAAAAACGGAGGCGACATTCGGTTTCGTGA
Protein sequence
MGVVTVAELKPSISGKRSFRPSSSIRHATEWPISDVSSDLAIEVGGSSFALHKFPLVSRSGKIRKLLLEAKDSKTSRVNLSTIPGGPEAFELTAKFCYGINVEITLSNVAMLRCASHYLEMTEEFADRNLETRTESYLKDMVFPNISNSISVLHRCESLLPFSEEINLVSRLIHAIASNACKEQLTSGLLKLDHNYPSKAVHNIEPETPSDWWGKSLTVLNLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGLVVRDHHLVKGSSLDLELQRKQRVIVETIVSLLPTQSRKSPVPMAFLSSLLKTAITASASTSCRSDLERRMGLQLDQAILEDVLVPSITHGINHSTMYDSESVVRIFSIFLNLDEEDDDEDSHLRDESEMMCDFDSPGSPKQSAILKVSKLLDNYLAEVALDSNLMPSKFIALAELLPDHARAVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGNHNQLFFGSTNGSQFPLRSSSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKTHPANKLFKSFTKKLSKLNVLFRINSIKPIGTKNSSENRFPFQKRRRHSVS
Homology
BLAST of CmaCh08G003980 vs. ExPASy Swiss-Prot
Match:
Q9SA69 (BTB/POZ domain-containing protein At1g03010 OS=Arabidopsis thaliana OX=3702 GN=At1g03010 PE=2 SV=1)
HSP 1 Score: 874.4 bits (2258), Expect = 7.8e-253
Identity = 466/641 (72.70%), Postives = 540/641 (84.24%), Query Frame = 0
Query: 1 MGVVTVAELKPSISGKRSFRPSSSIRHATEWPISDVSSDLAIEVGGSSFALHKFPLVSRS 60
MG+VTV ELKP+ +GKR FR +S+IRHA+EWPISDVSSDL ++VG SSF LHKFPLVSRS
Sbjct: 1 MGLVTVGELKPAFTGKRGFRLNSTIRHASEWPISDVSSDLTVQVGSSSFCLHKFPLVSRS 60
Query: 61 GKIRKLLLEAKDSKTSRVNLSTIPGGPEAFELTAKFCYGINVEITLSNVAMLRCASHYLE 120
GKIRKLL D K S V LS PGG EAFEL AKFCYGIN+EI L N+A LRCASHYLE
Sbjct: 61 GKIRKLL---ADPKISNVCLSNAPGGSEAFELAAKFCYGINIEINLLNIAKLRCASHYLE 120
Query: 121 MTEEFADRNLETRTESYLKDMVFPNISNSISVLHRCESLLPFSEEINLVSRLIHAIASNA 180
MTE+F++ NL ++TE +LK+ +FP+I NSI VLH CE+L+P SE++NLV+RLI A+A+NA
Sbjct: 121 MTEDFSEENLASKTEHFLKETIFPSILNSIIVLHHCETLIPVSEDLNLVNRLIIAVANNA 180
Query: 181 CKEQLTSGLLKLDHNYPSKAVHNIEPETPSDWWGKSLTVLNLDFFQRVLSAVKSKGLKQD 240
CKEQLTSGLLKLD+++ NIEP+TP DWWGKSL VLNLDFFQRV+SAVKSKGL QD
Sbjct: 181 CKEQLTSGLLKLDYSFSGT---NIEPQTPLDWWGKSLAVLNLDFFQRVISAVKSKGLIQD 240
Query: 241 MISKILINYAHNSLQGLVVRDHHLVKGSSLDLELQRKQRVIVETIVSLLPTQSRKSPVPM 300
+ISKILI+Y + SLQGL+VRD L K LD E ++KQR+IVETIV LLPTQ R+S VPM
Sbjct: 241 VISKILISYTNKSLQGLIVRDPKLEKERVLDSEGKKKQRLIVETIVRLLPTQGRRSSVPM 300
Query: 301 AFLSSLLKTAITASAST---SCRSDLERRMGLQLDQAILEDVLVPSITHGINHSTMYDSE 360
AFLSSLLK I S+S SCRSDLERR+GLQLDQAILEDVL+P +G N +TMYD +
Sbjct: 301 AFLSSLLKMVIATSSSASTGSCRSDLERRIGLQLDQAILEDVLIPINLNGTN-NTMYDID 360
Query: 361 SVVRIFSIFLNLDEEDDDEDSH---LRDESEMMCDFDSPGSPKQSAILKVSKLLDNYLAE 420
S++RIFSIFLNLDE+D++E+ H RDE+EM+ DFDSPGSPKQS+ILKVSKL+DNYLAE
Sbjct: 361 SILRIFSIFLNLDEDDEEEEHHHLQFRDETEMIYDFDSPGSPKQSSILKVSKLMDNYLAE 420
Query: 421 VALDSNLMPSKFIALAELLPDHARAVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQK 480
+A+D NL SKFIALAELLPDHAR +SDGLYRAVDI+LKVHPNIKDSERYRLCKTID QK
Sbjct: 421 IAMDPNLTTSKFIALAELLPDHARIISDGLYRAVDIYLKVHPNIKDSERYRLCKTIDSQK 480
Query: 481 LSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGNHNQL-FFGSTNGSQFPLRSSSG 540
LSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAM+ + F ++N QFP RS SG
Sbjct: 481 LSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMSSSIGPTQFLFNSNCHQFPQRSGSG 540
Query: 541 AGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKTHPANKLFKSF 600
AGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDH+S+KQELVK++P KLFKSF
Sbjct: 541 AGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHISIKQELVKSNPGTKLFKSF 600
Query: 601 TKKLSKLNVLFRINSIKP-IGTKNSSENRFPFQKRRRHSVS 634
KK+SKLN LF +S+KP + K SSE+RF FQ++RRHSVS
Sbjct: 601 AKKISKLNSLFSFSSLKPSLSGKASSESRFLFQRKRRHSVS 634
BLAST of CmaCh08G003980 vs. ExPASy Swiss-Prot
Match:
O82253 (BTB/POZ domain-containing protein SETH6 OS=Arabidopsis thaliana OX=3702 GN=SETH6 PE=3 SV=1)
HSP 1 Score: 746.5 bits (1926), Expect = 2.5e-214
Identity = 412/656 (62.80%), Postives = 506/656 (77.13%), Query Frame = 0
Query: 1 MGVVTVAEL-KPSISGKRSFRPSSSIRHATEWPISDVSSDLAIEVGGSSFALHKFPLVSR 60
MGVVTV E K S++ KR+FRPSSSIRH +WP+SDV+SDL IEVG ++F+LHKFPLVSR
Sbjct: 1 MGVVTVPESNKQSVAAKRAFRPSSSIRHTPQWPVSDVTSDLTIEVGSATFSLHKFPLVSR 60
Query: 61 SGKIRKLLLEAKDSKTSRVNLSTIPGGPEAFELTAKFCYGINVEITLSNVAMLRCASHYL 120
SG+IRKL+LE+KD + +NL+ +PGG E+FEL AKFCYG+ V+ SN+A LRC +HYL
Sbjct: 61 SGRIRKLVLESKD---TNLNLAAVPGGSESFELAAKFCYGVGVQYNSSNIAALRCVAHYL 120
Query: 121 EMTEEFADRNLETRTESYLKDMVFPNISNSISVLHRCESLLPFSEEINLVSRLIHAIASN 180
EMTE+ +++NLE RTE+YLKD +F +ISNSI+VLH CE LLP +EEINLV RL++AIA N
Sbjct: 121 EMTEDLSEKNLEARTEAYLKDSIFNDISNSITVLHSCERLLPVAEEINLVGRLVNAIAVN 180
Query: 181 ACKEQLTSGLLKLDHNYPSKAVHNIEPET--PSDWWGKSLTVLNLDFFQRVLSAVKSKGL 240
ACKEQL SGLLKLD ++ PET P DWWG+SL +L LDFFQRVLSA+KSKGL
Sbjct: 181 ACKEQLASGLLKLDQSFSCGV-----PETAKPCDWWGRSLPILKLDFFQRVLSAMKSKGL 240
Query: 241 KQDMISKILINYAHNSLQGLVVRDHHLVKGSSLDLELQRKQRVIVETIVSLLPTQSRKSP 300
D+IS IL++YA SLQ ++R+ +LVK D +LQRKQR+++E +V LLPTQ+ KS
Sbjct: 241 NHDIISDILMSYARKSLQ--IIREPNLVKS---DSDLQRKQRIVLEAVVGLLPTQANKSS 300
Query: 301 VPMAFLSSLLKTAITASASTSCRSDLERRMGLQLDQAILEDVLVPSITHGINHSTMYDSE 360
+P++FLSSLLKTAI + S SCRSDLERR+ LDQAILED+L+P+ N MYD++
Sbjct: 301 IPISFLSSLLKTAIGSGTSVSCRSDLERRISHLLDQAILEDILIPA-----NIGAMYDTD 360
Query: 361 SVVRIFSIFLNLDE----EDDDEDSHLRDESEM-MCDFDSPGSPKQSAILKVSKLLDNYL 420
SV RIFS+FLNLDE +DDD++ DESEM M DF+ SPKQS+I KVSKL+D+YL
Sbjct: 361 SVQRIFSMFLNLDECEYRDDDDDEEDAVDESEMAMYDFEGAESPKQSSIFKVSKLMDSYL 420
Query: 421 AEVALDSNLMPSKFIALAELLPDHARAVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDC 480
AEVALDS+L PSKFIALAELLPDHAR V DGLYRAVDIFLKVHP++KDSERYRLCKT+ C
Sbjct: 421 AEVALDSSLPPSKFIALAELLPDHARVVCDGLYRAVDIFLKVHPHMKDSERYRLCKTVSC 480
Query: 481 QKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGNHNQLFFGSTNGSQ---FPLR 540
+KLSQ+A SHAAQNERLPVQ+AVQVL++EQ RL+NAM G +N SQ FP R
Sbjct: 481 KKLSQDASSHAAQNERLPVQIAVQVLFYEQTRLKNAMTSGGGT---GGSNQSQFFLFPNR 540
Query: 541 SSSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKTHPANK- 600
S SG SGAISPRDNYASVRRENREL+LEVARMRMRLTDLEKDHVSMK++ VK +
Sbjct: 541 SGSGMASGAISPRDNYASVRRENRELRLEVARMRMRLTDLEKDHVSMKRDFVKPQSRRRR 600
Query: 601 --LFKSFTKKLSKLN-VLFRINSIKPIGT--------KNSSENRFPFQKRRRHSVS 634
+ + ++ L+KLN ++ R S + + + K +SE RF FQKRR HSVS
Sbjct: 601 YGMLRKLSRGLNKLNAIVLRFRSSQSVASSGKKHTEEKTNSERRFMFQKRRCHSVS 635
BLAST of CmaCh08G003980 vs. ExPASy Swiss-Prot
Match:
Q9FKB6 (BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana OX=3702 GN=At5g48800 PE=2 SV=1)
HSP 1 Score: 496.5 bits (1277), Expect = 4.4e-139
Identity = 275/582 (47.25%), Postives = 391/582 (67.18%), Query Frame = 0
Query: 23 SSIRHATEWPISDVSSDLAIEVGGSSFALHKFPLVSRSGKIRKLLLEAKDSKTSRVNLST 82
SS + +EW DV SD+ IEV G +FALHKFPLVSRSG+IR+++ E +DS S+V L
Sbjct: 28 SSRQSCSEWIFRDVPSDITIEVNGGNFALHKFPLVSRSGRIRRIVAEHRDSDISKVELLN 87
Query: 83 IPGGPEAFELTAKFCYGINVEITLSNVAMLRCASHYLEMTEEFADRNLETRTESYLKDMV 142
+PGG E FEL AKFCYGIN EIT SNVA L C S YLEMTEE++ NL +RTE YL+ +V
Sbjct: 88 LPGGAETFELAAKFCYGINFEITSSNVAQLFCVSDYLEMTEEYSKDNLASRTEEYLESIV 147
Query: 143 FPNISNSISVLHRCESLLPFSEEINLVSRLIHAIASNACKEQLTSGLLKLDHNYPSKAVH 202
N+ + VL + E LLP ++E+N++ R I AIAS AC EQ+ S +L+++ +
Sbjct: 148 CKNLEMCVQVLKQSEILLPLADELNIIGRCIDAIASKACAEQIASSFSRLEYSSSGRLHM 207
Query: 203 NIEPETP---SDWWGKSLTVLNLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGLVV 262
+ + ++ DWW + L+VL +D +QRV++A+K +G++ + I L++YA L
Sbjct: 208 SRQVKSSGDGGDWWIEDLSVLRIDLYQRVMNAMKCRGVRPESIGASLVSYAERE---LTK 267
Query: 263 RDHHLVKGSSLDLELQRKQRVIVETIVSLLPTQSRKSPVPMAFLSSLLKTAITASASTSC 322
R H ++ IVETIV+LLP ++ VP++FL LL+ A+ S SC
Sbjct: 268 RSEH--------------EQTIVETIVTLLPVEN--LVVPISFLFGLLRRAVILDTSVSC 327
Query: 323 RSDLERRMGLQLDQAILEDVLVPSITHGINHSTMYDSESVVRIFSIFLNLDEEDDDEDSH 382
R DLERR+G QLD A L+D+L+PS H T++D ++V R I +N ++ D+
Sbjct: 328 RLDLERRLGSQLDMATLDDLLIPSFRHA--GDTLFDIDTVHR---ILVNFSQQGGDDS-- 387
Query: 383 LRDESEMMCDFDSPGSPKQSAILKVSKLLDNYLAEVALDSNLMPSKFIALAELLPDHARA 442
++ E + + DSP SP Q+A+ KV+KL+D+YLAE+A D+NL SKF+ +AE LP HAR
Sbjct: 388 --EDEESVFECDSPHSPSQTAMFKVAKLVDSYLAEIAPDANLDLSKFLLIAEALPPHART 447
Query: 443 VSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLY 502
+ DGLYRA+D++LK H + DS++ +L K ID QKLSQEA +HAAQNERLP+Q VQVLY
Sbjct: 448 LHDGLYRAIDLYLKAHQGLSDSDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLY 507
Query: 503 FEQIRLRNAMNGNHNQLFFGSTNGSQFPLRSSSGAGSGAISPRDNYASVRRENRELKLEV 562
FEQ++LR+++ +++ Q R +SGA S +SP+DNYAS+RRENRELKLE+
Sbjct: 508 FEQLKLRSSLCSSYSDEEPKPKQQQQQSWRINSGALSATMSPKDNYASLRRENRELKLEL 567
Query: 563 ARMRMRLTDLEKDHVSMKQELVKTHPANKLFKSFTKKLSKLN 602
AR+RMRL DLEK+H+ MK+++ ++H + K SF+KK+ KL+
Sbjct: 568 ARLRMRLNDLEKEHICMKRDMQRSH-SRKFMSSFSKKMGKLS 580
BLAST of CmaCh08G003980 vs. ExPASy Swiss-Prot
Match:
Q9C9Z7 (BTB/POZ domain-containing protein At3g08570 OS=Arabidopsis thaliana OX=3702 GN=At3g08570 PE=2 SV=2)
HSP 1 Score: 441.4 bits (1134), Expect = 1.7e-122
Identity = 258/577 (44.71%), Postives = 373/577 (64.64%), Query Frame = 0
Query: 34 SDVSSDLAIEVGGSSFALHKFPLVSRSGKIRKLLLEAKDSKT--SRVNLSTIPGGPEAFE 93
SDV+ D+ I V G SF LHKFPLV+R GKIRK++ E K+S + S L PGG + FE
Sbjct: 32 SDVAGDITIVVDGESFLLHKFPLVARCGKIRKMVAEMKESSSNLSHTELRDFPGGSKTFE 91
Query: 94 LTAKFCYGINVEITLSNVAMLRCASHYLEMTEEFADRNLETRTESYLKDMVFPNISNSIS 153
L KFCYGIN EIT+SNV +RCA+ YLEMTE+F + NL RTE+YL+ + F ++ S+
Sbjct: 92 LAMKFCYGINFEITISNVVAIRCAAGYLEMTEDFKEENLIARTETYLEQVAFRSLEKSVE 151
Query: 154 VLHRCESLLP--FSEEINLVSRLIHAIASNACKEQLTSGLLKLDHNYPSKAVHNIEPETP 213
VL CE+L P +E ++ R + AIA NAC+EQL GL +L+ S ++
Sbjct: 152 VLCSCETLYPQDIAETAHIPDRCVEAIAVNACREQLVLGLSRLNRGTES---GELKRGDS 211
Query: 214 SDWWGKSLTVLNLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGLVVRDHHLVKGSS 273
+WW + L+ L +D++ RV+SA+ GL+ + I L++YA SL+G+ + + +
Sbjct: 212 PEWWIEDLSALRIDYYARVVSAMARTGLRSESIITSLMHYAQESLKGI----RNCKERTK 271
Query: 274 LDL-ELQRKQRVIVETIVSLLPTQSRKSPVPMAFLSSLLKTAITASASTSCRSDLERRMG 333
LD + +QR ++E IVSL P + VP++FL +L+ IT + + SCR +LERR+
Sbjct: 272 LDSGTFENEQRNVLEAIVSLFPNDN----VPLSFLFGMLRVGITINVAISCRLELERRIA 331
Query: 334 LQLDQAILEDVLVPSITHGINHSTMYDSESVVRIFSIFLNL--DEEDDDEDSHLRDESEM 393
QL+ L+D+L+P + G +MYD ++V RI FL +EE+ DED +E+E
Sbjct: 332 QQLETVSLDDLLIPVVRDG---DSMYDVDTVHRILVCFLKKIEEEEEYDEDCCYENETEN 391
Query: 394 MCDFDSPGSPKQSAILKVSKLLDNYLAEVALDSNLMPSKFIALAELLPDHARAVSDGLYR 453
+ GS S++LKV +++D YLAE+A D L KF+AL E+LPD+AR + DGLYR
Sbjct: 392 L-----TGSMCHSSLLKVGRIMDAYLAEIAPDPCLSLHKFMALIEILPDYARVMDDGLYR 451
Query: 454 AVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLR 513
A+D+FLK HP++ + E LCK ID QKLSQEAC+H AQN+RLP+QM V+VLY EQ+R++
Sbjct: 452 AIDMFLKGHPSLNEQECKSLCKFIDTQKLSQEACNHVAQNDRLPMQMVVRVLYSEQLRMK 511
Query: 514 NAMNGNHNQLFFGSTNGSQFPLRSSSGAGSGAISPRDNYASVRRENRELKLEVARMRMRL 573
N M+G + G SQ + SS S A+SPRD YAS+RRENRELKLE++R+R+RL
Sbjct: 512 NVMSGESGE---GLLLSSQ---KHSSENPSRAVSPRDTYASLRRENRELKLEISRVRVRL 571
Query: 574 TDLEKDHVSMKQELV-KTHPANKLFKSFTKKLSKLNV 603
T+LEK+ + MKQ ++ K+ L S +K + ++++
Sbjct: 572 TELEKEQILMKQGMMEKSGHGGTLLTSLSKGIGRISI 583
BLAST of CmaCh08G003980 vs. ExPASy Swiss-Prot
Match:
Q66GP0 (BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana OX=3702 GN=SR1IP1 PE=1 SV=2)
HSP 1 Score: 429.1 bits (1102), Expect = 8.7e-119
Identity = 262/639 (41.00%), Postives = 385/639 (60.25%), Query Frame = 0
Query: 13 ISGKRSFRPSSSIRHATEWPIS-DVSSDLAIEVGGSSFALHKFPLVSRSGKIRKLLLE-A 72
+S K+ SS+++ +EW S +VSSD+ + VG +SF+LHKFPL+S+ G I+KL+ E +
Sbjct: 1 MSAKKKDLLSSAMKRTSEWISSQEVSSDVTVHVGEASFSLHKFPLMSKCGFIKKLVSESS 60
Query: 73 KDSKTSRVNLSTIPGGPEAFELTAKFCYGINVEITLSNVAMLRCASHYLEMTEEFADRNL 132
KDS ++ + + IPGG EAFEL AKFCYGIN +++ N+AMLRCA+ YLEMTEE + NL
Sbjct: 61 KDSDSTVIKIPDIPGGSEAFELAAKFCYGINFDMSTENIAMLRCAAEYLEMTEEHSVENL 120
Query: 133 ETRTESYLKDMVFPNISNSISVLHRCESLLPFSEEINLVSRLIHAIASNACKEQLTSGLL 192
R E+YL ++ ++S+SI+VLH+ E LLP +E + LVSR I AIA C+E
Sbjct: 121 VVRAEAYLNEVALKSLSSSITVLHKSEKLLPIAERVKLVSRCIDAIAYMTCQESHFCSPS 180
Query: 193 KLDHNYPSKAVHNIEPETPSDWWGKSLTVLNLDFFQRVLSAVKSKGLKQDMISKILINYA 252
+ V + DWW + LTVL +D FQRVL A+ ++G KQ + +L+ YA
Sbjct: 181 SSNSGNNEVVVQQQSKQPVVDWWAEDLTVLRIDSFQRVLIAMMARGFKQYGLGPVLMLYA 240
Query: 253 HNSLQGLVVRDHHLVKGSSLDLELQRKQRVIVETIVSLLPTQSRKSPVPMAFLSSLLKTA 312
SL+GL + + K ++ + + ++RVI+ETIVSLLP + K+ + ++FLS LL+ A
Sbjct: 241 QKSLRGLEIFGKGMKK---IEPKQEHEKRVILETIVSLLPRE--KNAMSVSFLSMLLRAA 300
Query: 313 ITASASTSCRSDLERRMGLQLDQAILEDVLVPSITHGINHSTMYDSESVVRIFSIFLNLD 372
I + +CR DLE RMGLQL QA+L+D+L+PS + +HS M+D+++V RI +L +
Sbjct: 301 IFLETTVACRLDLENRMGLQLGQAVLDDLLIPSYSFTGDHS-MFDTDTVQRILMNYLEFE 360
Query: 373 EEDDDEDSHLRDESEMMCDFDSPGSPKQSAILKVSKLLDNYLAEVALDSNLMPSKFIALA 432
E + G + +V KLL+NY+AE+A D N+ KFI LA
Sbjct: 361 VEG--------------VRLSNNGVDLAGDMERVGKLLENYMAEIASDRNVSLQKFIGLA 420
Query: 433 ELLPDHARAVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLP 492
EL+P+ +R DG+YRAVDI+LK HPN+ D ER ++C +DCQKLS+EAC+HAAQN+RLP
Sbjct: 421 ELIPEQSRVTEDGMYRAVDIYLKAHPNMSDVERKKVCSLMDCQKLSREACAHAAQNDRLP 480
Query: 493 VQMAVQVLYFEQIRLRNAMNGNHNQLFFGSTNGSQFPLRSSSGAGSGAISPRDNYASVRR 552
VQ VQVLY+EQ RLR + + S + + P + ++ S D + ++R
Sbjct: 481 VQTIVQVLYYEQQRLRGEVTND-------SDSPAPPPPQPAAVLPPKLSSYTDELSKLKR 540
Query: 553 ENRELKLEVARMRMRLTDLEKD-HVSMKQELVKTHPANKL---------------FKSFT 612
EN++LKLE+ +M+M+L + EK+ + T+P++ + S +
Sbjct: 541 ENQDLKLELLKMKMKLKEFEKESEKKTSSSTISTNPSSPISTASTGKPPLPRKSFINSVS 600
Query: 613 KKLSKLNVLFRINSIKPIGTKNSSENRFPFQKRRRHSVS 634
KKL KLN SI P + R K RRHS+S
Sbjct: 601 KKLGKLNPF----SITPY----NGRGRTKPPKDRRHSIS 604
BLAST of CmaCh08G003980 vs. TAIR 10
Match:
AT1G03010.1 (Phototropic-responsive NPH3 family protein )
HSP 1 Score: 874.4 bits (2258), Expect = 5.6e-254
Identity = 466/641 (72.70%), Postives = 540/641 (84.24%), Query Frame = 0
Query: 1 MGVVTVAELKPSISGKRSFRPSSSIRHATEWPISDVSSDLAIEVGGSSFALHKFPLVSRS 60
MG+VTV ELKP+ +GKR FR +S+IRHA+EWPISDVSSDL ++VG SSF LHKFPLVSRS
Sbjct: 1 MGLVTVGELKPAFTGKRGFRLNSTIRHASEWPISDVSSDLTVQVGSSSFCLHKFPLVSRS 60
Query: 61 GKIRKLLLEAKDSKTSRVNLSTIPGGPEAFELTAKFCYGINVEITLSNVAMLRCASHYLE 120
GKIRKLL D K S V LS PGG EAFEL AKFCYGIN+EI L N+A LRCASHYLE
Sbjct: 61 GKIRKLL---ADPKISNVCLSNAPGGSEAFELAAKFCYGINIEINLLNIAKLRCASHYLE 120
Query: 121 MTEEFADRNLETRTESYLKDMVFPNISNSISVLHRCESLLPFSEEINLVSRLIHAIASNA 180
MTE+F++ NL ++TE +LK+ +FP+I NSI VLH CE+L+P SE++NLV+RLI A+A+NA
Sbjct: 121 MTEDFSEENLASKTEHFLKETIFPSILNSIIVLHHCETLIPVSEDLNLVNRLIIAVANNA 180
Query: 181 CKEQLTSGLLKLDHNYPSKAVHNIEPETPSDWWGKSLTVLNLDFFQRVLSAVKSKGLKQD 240
CKEQLTSGLLKLD+++ NIEP+TP DWWGKSL VLNLDFFQRV+SAVKSKGL QD
Sbjct: 181 CKEQLTSGLLKLDYSFSGT---NIEPQTPLDWWGKSLAVLNLDFFQRVISAVKSKGLIQD 240
Query: 241 MISKILINYAHNSLQGLVVRDHHLVKGSSLDLELQRKQRVIVETIVSLLPTQSRKSPVPM 300
+ISKILI+Y + SLQGL+VRD L K LD E ++KQR+IVETIV LLPTQ R+S VPM
Sbjct: 241 VISKILISYTNKSLQGLIVRDPKLEKERVLDSEGKKKQRLIVETIVRLLPTQGRRSSVPM 300
Query: 301 AFLSSLLKTAITASAST---SCRSDLERRMGLQLDQAILEDVLVPSITHGINHSTMYDSE 360
AFLSSLLK I S+S SCRSDLERR+GLQLDQAILEDVL+P +G N +TMYD +
Sbjct: 301 AFLSSLLKMVIATSSSASTGSCRSDLERRIGLQLDQAILEDVLIPINLNGTN-NTMYDID 360
Query: 361 SVVRIFSIFLNLDEEDDDEDSH---LRDESEMMCDFDSPGSPKQSAILKVSKLLDNYLAE 420
S++RIFSIFLNLDE+D++E+ H RDE+EM+ DFDSPGSPKQS+ILKVSKL+DNYLAE
Sbjct: 361 SILRIFSIFLNLDEDDEEEEHHHLQFRDETEMIYDFDSPGSPKQSSILKVSKLMDNYLAE 420
Query: 421 VALDSNLMPSKFIALAELLPDHARAVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQK 480
+A+D NL SKFIALAELLPDHAR +SDGLYRAVDI+LKVHPNIKDSERYRLCKTID QK
Sbjct: 421 IAMDPNLTTSKFIALAELLPDHARIISDGLYRAVDIYLKVHPNIKDSERYRLCKTIDSQK 480
Query: 481 LSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGNHNQL-FFGSTNGSQFPLRSSSG 540
LSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAM+ + F ++N QFP RS SG
Sbjct: 481 LSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMSSSIGPTQFLFNSNCHQFPQRSGSG 540
Query: 541 AGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKTHPANKLFKSF 600
AGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDH+S+KQELVK++P KLFKSF
Sbjct: 541 AGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHISIKQELVKSNPGTKLFKSF 600
Query: 601 TKKLSKLNVLFRINSIKP-IGTKNSSENRFPFQKRRRHSVS 634
KK+SKLN LF +S+KP + K SSE+RF FQ++RRHSVS
Sbjct: 601 AKKISKLNSLFSFSSLKPSLSGKASSESRFLFQRKRRHSVS 634
BLAST of CmaCh08G003980 vs. TAIR 10
Match:
AT2G47860.1 (Phototropic-responsive NPH3 family protein )
HSP 1 Score: 746.5 bits (1926), Expect = 1.7e-215
Identity = 412/656 (62.80%), Postives = 506/656 (77.13%), Query Frame = 0
Query: 1 MGVVTVAEL-KPSISGKRSFRPSSSIRHATEWPISDVSSDLAIEVGGSSFALHKFPLVSR 60
MGVVTV E K S++ KR+FRPSSSIRH +WP+SDV+SDL IEVG ++F+LHKFPLVSR
Sbjct: 1 MGVVTVPESNKQSVAAKRAFRPSSSIRHTPQWPVSDVTSDLTIEVGSATFSLHKFPLVSR 60
Query: 61 SGKIRKLLLEAKDSKTSRVNLSTIPGGPEAFELTAKFCYGINVEITLSNVAMLRCASHYL 120
SG+IRKL+LE+KD + +NL+ +PGG E+FEL AKFCYG+ V+ SN+A LRC +HYL
Sbjct: 61 SGRIRKLVLESKD---TNLNLAAVPGGSESFELAAKFCYGVGVQYNSSNIAALRCVAHYL 120
Query: 121 EMTEEFADRNLETRTESYLKDMVFPNISNSISVLHRCESLLPFSEEINLVSRLIHAIASN 180
EMTE+ +++NLE RTE+YLKD +F +ISNSI+VLH CE LLP +EEINLV RL++AIA N
Sbjct: 121 EMTEDLSEKNLEARTEAYLKDSIFNDISNSITVLHSCERLLPVAEEINLVGRLVNAIAVN 180
Query: 181 ACKEQLTSGLLKLDHNYPSKAVHNIEPET--PSDWWGKSLTVLNLDFFQRVLSAVKSKGL 240
ACKEQL SGLLKLD ++ PET P DWWG+SL +L LDFFQRVLSA+KSKGL
Sbjct: 181 ACKEQLASGLLKLDQSFSCGV-----PETAKPCDWWGRSLPILKLDFFQRVLSAMKSKGL 240
Query: 241 KQDMISKILINYAHNSLQGLVVRDHHLVKGSSLDLELQRKQRVIVETIVSLLPTQSRKSP 300
D+IS IL++YA SLQ ++R+ +LVK D +LQRKQR+++E +V LLPTQ+ KS
Sbjct: 241 NHDIISDILMSYARKSLQ--IIREPNLVKS---DSDLQRKQRIVLEAVVGLLPTQANKSS 300
Query: 301 VPMAFLSSLLKTAITASASTSCRSDLERRMGLQLDQAILEDVLVPSITHGINHSTMYDSE 360
+P++FLSSLLKTAI + S SCRSDLERR+ LDQAILED+L+P+ N MYD++
Sbjct: 301 IPISFLSSLLKTAIGSGTSVSCRSDLERRISHLLDQAILEDILIPA-----NIGAMYDTD 360
Query: 361 SVVRIFSIFLNLDE----EDDDEDSHLRDESEM-MCDFDSPGSPKQSAILKVSKLLDNYL 420
SV RIFS+FLNLDE +DDD++ DESEM M DF+ SPKQS+I KVSKL+D+YL
Sbjct: 361 SVQRIFSMFLNLDECEYRDDDDDEEDAVDESEMAMYDFEGAESPKQSSIFKVSKLMDSYL 420
Query: 421 AEVALDSNLMPSKFIALAELLPDHARAVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDC 480
AEVALDS+L PSKFIALAELLPDHAR V DGLYRAVDIFLKVHP++KDSERYRLCKT+ C
Sbjct: 421 AEVALDSSLPPSKFIALAELLPDHARVVCDGLYRAVDIFLKVHPHMKDSERYRLCKTVSC 480
Query: 481 QKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGNHNQLFFGSTNGSQ---FPLR 540
+KLSQ+A SHAAQNERLPVQ+AVQVL++EQ RL+NAM G +N SQ FP R
Sbjct: 481 KKLSQDASSHAAQNERLPVQIAVQVLFYEQTRLKNAMTSGGGT---GGSNQSQFFLFPNR 540
Query: 541 SSSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKTHPANK- 600
S SG SGAISPRDNYASVRRENREL+LEVARMRMRLTDLEKDHVSMK++ VK +
Sbjct: 541 SGSGMASGAISPRDNYASVRRENRELRLEVARMRMRLTDLEKDHVSMKRDFVKPQSRRRR 600
Query: 601 --LFKSFTKKLSKLN-VLFRINSIKPIGT--------KNSSENRFPFQKRRRHSVS 634
+ + ++ L+KLN ++ R S + + + K +SE RF FQKRR HSVS
Sbjct: 601 YGMLRKLSRGLNKLNAIVLRFRSSQSVASSGKKHTEEKTNSERRFMFQKRRCHSVS 635
BLAST of CmaCh08G003980 vs. TAIR 10
Match:
AT2G47860.3 (Phototropic-responsive NPH3 family protein )
HSP 1 Score: 733.4 bits (1892), Expect = 1.5e-211
Identity = 412/679 (60.68%), Postives = 506/679 (74.52%), Query Frame = 0
Query: 1 MGVVTVAEL-KPSISGKRSFRPSSSIRHATEWPISDVSSDLAIEVGGSSFALHK------ 60
MGVVTV E K S++ KR+FRPSSSIRH +WP+SDV+SDL IEVG ++F+LHK
Sbjct: 1 MGVVTVPESNKQSVAAKRAFRPSSSIRHTPQWPVSDVTSDLTIEVGSATFSLHKVTKFNK 60
Query: 61 -----------------FPLVSRSGKIRKLLLEAKDSKTSRVNLSTIPGGPEAFELTAKF 120
FPLVSRSG+IRKL+LE+KD + +NL+ +PGG E+FEL AKF
Sbjct: 61 LRRKKRNCFTQTRSLLQFPLVSRSGRIRKLVLESKD---TNLNLAAVPGGSESFELAAKF 120
Query: 121 CYGINVEITLSNVAMLRCASHYLEMTEEFADRNLETRTESYLKDMVFPNISNSISVLHRC 180
CYG+ V+ SN+A LRC +HYLEMTE+ +++NLE RTE+YLKD +F +ISNSI+VLH C
Sbjct: 121 CYGVGVQYNSSNIAALRCVAHYLEMTEDLSEKNLEARTEAYLKDSIFNDISNSITVLHSC 180
Query: 181 ESLLPFSEEINLVSRLIHAIASNACKEQLTSGLLKLDHNYPSKAVHNIEPET--PSDWWG 240
E LLP +EEINLV RL++AIA NACKEQL SGLLKLD ++ PET P DWWG
Sbjct: 181 ERLLPVAEEINLVGRLVNAIAVNACKEQLASGLLKLDQSFSCGV-----PETAKPCDWWG 240
Query: 241 KSLTVLNLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGLVVRDHHLVKGSSLDLEL 300
+SL +L LDFFQRVLSA+KSKGL D+IS IL++YA SLQ ++R+ +LVK D +L
Sbjct: 241 RSLPILKLDFFQRVLSAMKSKGLNHDIISDILMSYARKSLQ--IIREPNLVKS---DSDL 300
Query: 301 QRKQRVIVETIVSLLPTQSRKSPVPMAFLSSLLKTAITASASTSCRSDLERRMGLQLDQA 360
QRKQR+++E +V LLPTQ+ KS +P++FLSSLLKTAI + S SCRSDLERR+ LDQA
Sbjct: 301 QRKQRIVLEAVVGLLPTQANKSSIPISFLSSLLKTAIGSGTSVSCRSDLERRISHLLDQA 360
Query: 361 ILEDVLVPSITHGINHSTMYDSESVVRIFSIFLNLDE----EDDDEDSHLRDESEM-MCD 420
ILED+L+P+ N MYD++SV RIFS+FLNLDE +DDD++ DESEM M D
Sbjct: 361 ILEDILIPA-----NIGAMYDTDSVQRIFSMFLNLDECEYRDDDDDEEDAVDESEMAMYD 420
Query: 421 FDSPGSPKQSAILKVSKLLDNYLAEVALDSNLMPSKFIALAELLPDHARAVSDGLYRAVD 480
F+ SPKQS+I KVSKL+D+YLAEVALDS+L PSKFIALAELLPDHAR V DGLYRAVD
Sbjct: 421 FEGAESPKQSSIFKVSKLMDSYLAEVALDSSLPPSKFIALAELLPDHARVVCDGLYRAVD 480
Query: 481 IFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAM 540
IFLKVHP++KDSERYRLCKT+ C+KLSQ+A SHAAQNERLPVQ+AVQVL++EQ RL+NAM
Sbjct: 481 IFLKVHPHMKDSERYRLCKTVSCKKLSQDASSHAAQNERLPVQIAVQVLFYEQTRLKNAM 540
Query: 541 NGNHNQLFFGSTNGSQ---FPLRSSSGAGSGAISPRDNYASVRRENRELKLEVARMRMRL 600
G +N SQ FP RS SG SGAISPRDNYASVRRENREL+LEVARMRMRL
Sbjct: 541 TSGGGT---GGSNQSQFFLFPNRSGSGMASGAISPRDNYASVRRENRELRLEVARMRMRL 600
Query: 601 TDLEKDHVSMKQELVKTHPANK---LFKSFTKKLSKLN-VLFRINSIKPIGT-------- 634
TDLEKDHVSMK++ VK + + + ++ L+KLN ++ R S + + +
Sbjct: 601 TDLEKDHVSMKRDFVKPQSRRRRYGMLRKLSRGLNKLNAIVLRFRSSQSVASSGKKHTEE 658
BLAST of CmaCh08G003980 vs. TAIR 10
Match:
AT2G47860.2 (Phototropic-responsive NPH3 family protein )
HSP 1 Score: 587.8 bits (1514), Expect = 1.0e-167
Identity = 334/535 (62.43%), Postives = 407/535 (76.07%), Query Frame = 0
Query: 121 MTEEFADRNLETRTESYLKDMVFPNISNSISVLHRCESLLPFSEEINLVSRLIHAIASNA 180
MTE+ +++NLE RTE+YLKD +F +ISNSI+VLH CE LLP +EEINLV RL++AIA NA
Sbjct: 1 MTEDLSEKNLEARTEAYLKDSIFNDISNSITVLHSCERLLPVAEEINLVGRLVNAIAVNA 60
Query: 181 CKEQLTSGLLKLDHNYPSKAVHNIEPET--PSDWWGKSLTVLNLDFFQRVLSAVKSKGLK 240
CKEQL SGLLKLD ++ PET P DWWG+SL +L LDFFQRVLSA+KSKGL
Sbjct: 61 CKEQLASGLLKLDQSFSCGV-----PETAKPCDWWGRSLPILKLDFFQRVLSAMKSKGLN 120
Query: 241 QDMISKILINYAHNSLQGLVVRDHHLVKGSSLDLELQRKQRVIVETIVSLLPTQSRKSPV 300
D+IS IL++YA SLQ ++R+ +LVK D +LQRKQR+++E +V LLPTQ+ KS +
Sbjct: 121 HDIISDILMSYARKSLQ--IIREPNLVKS---DSDLQRKQRIVLEAVVGLLPTQANKSSI 180
Query: 301 PMAFLSSLLKTAITASASTSCRSDLERRMGLQLDQAILEDVLVPSITHGINHSTMYDSES 360
P++FLSSLLKTAI + S SCRSDLERR+ LDQAILED+L+P+ N MYD++S
Sbjct: 181 PISFLSSLLKTAIGSGTSVSCRSDLERRISHLLDQAILEDILIPA-----NIGAMYDTDS 240
Query: 361 VVRIFSIFLNLDE----EDDDEDSHLRDESEM-MCDFDSPGSPKQSAILKVSKLLDNYLA 420
V RIFS+FLNLDE +DDD++ DESEM M DF+ SPKQS+I KVSKL+D+YLA
Sbjct: 241 VQRIFSMFLNLDECEYRDDDDDEEDAVDESEMAMYDFEGAESPKQSSIFKVSKLMDSYLA 300
Query: 421 EVALDSNLMPSKFIALAELLPDHARAVSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQ 480
EVALDS+L PSKFIALAELLPDHAR V DGLYRAVDIFLKVHP++KDSERYRLCKT+ C+
Sbjct: 301 EVALDSSLPPSKFIALAELLPDHARVVCDGLYRAVDIFLKVHPHMKDSERYRLCKTVSCK 360
Query: 481 KLSQEACSHAAQNERLPVQMAVQVLYFEQIRLRNAMNGNHNQLFFGSTNGSQ---FPLRS 540
KLSQ+A SHAAQNERLPVQ+AVQVL++EQ RL+NAM G +N SQ FP RS
Sbjct: 361 KLSQDASSHAAQNERLPVQIAVQVLFYEQTRLKNAMTSGGGT---GGSNQSQFFLFPNRS 420
Query: 541 SSGAGSGAISPRDNYASVRRENRELKLEVARMRMRLTDLEKDHVSMKQELVKTHPANK-- 600
SG SGAISPRDNYASVRRENREL+LEVARMRMRLTDLEKDHVSMK++ VK +
Sbjct: 421 GSGMASGAISPRDNYASVRRENRELRLEVARMRMRLTDLEKDHVSMKRDFVKPQSRRRRY 480
Query: 601 -LFKSFTKKLSKLN-VLFRINSIKPIGT--------KNSSENRFPFQKRRRHSVS 634
+ + ++ L+KLN ++ R S + + + K +SE RF FQKRR HSVS
Sbjct: 481 GMLRKLSRGLNKLNAIVLRFRSSQSVASSGKKHTEEKTNSERRFMFQKRRCHSVS 517
BLAST of CmaCh08G003980 vs. TAIR 10
Match:
AT5G48800.1 (Phototropic-responsive NPH3 family protein )
HSP 1 Score: 496.5 bits (1277), Expect = 3.2e-140
Identity = 275/582 (47.25%), Postives = 391/582 (67.18%), Query Frame = 0
Query: 23 SSIRHATEWPISDVSSDLAIEVGGSSFALHKFPLVSRSGKIRKLLLEAKDSKTSRVNLST 82
SS + +EW DV SD+ IEV G +FALHKFPLVSRSG+IR+++ E +DS S+V L
Sbjct: 28 SSRQSCSEWIFRDVPSDITIEVNGGNFALHKFPLVSRSGRIRRIVAEHRDSDISKVELLN 87
Query: 83 IPGGPEAFELTAKFCYGINVEITLSNVAMLRCASHYLEMTEEFADRNLETRTESYLKDMV 142
+PGG E FEL AKFCYGIN EIT SNVA L C S YLEMTEE++ NL +RTE YL+ +V
Sbjct: 88 LPGGAETFELAAKFCYGINFEITSSNVAQLFCVSDYLEMTEEYSKDNLASRTEEYLESIV 147
Query: 143 FPNISNSISVLHRCESLLPFSEEINLVSRLIHAIASNACKEQLTSGLLKLDHNYPSKAVH 202
N+ + VL + E LLP ++E+N++ R I AIAS AC EQ+ S +L+++ +
Sbjct: 148 CKNLEMCVQVLKQSEILLPLADELNIIGRCIDAIASKACAEQIASSFSRLEYSSSGRLHM 207
Query: 203 NIEPETP---SDWWGKSLTVLNLDFFQRVLSAVKSKGLKQDMISKILINYAHNSLQGLVV 262
+ + ++ DWW + L+VL +D +QRV++A+K +G++ + I L++YA L
Sbjct: 208 SRQVKSSGDGGDWWIEDLSVLRIDLYQRVMNAMKCRGVRPESIGASLVSYAERE---LTK 267
Query: 263 RDHHLVKGSSLDLELQRKQRVIVETIVSLLPTQSRKSPVPMAFLSSLLKTAITASASTSC 322
R H ++ IVETIV+LLP ++ VP++FL LL+ A+ S SC
Sbjct: 268 RSEH--------------EQTIVETIVTLLPVEN--LVVPISFLFGLLRRAVILDTSVSC 327
Query: 323 RSDLERRMGLQLDQAILEDVLVPSITHGINHSTMYDSESVVRIFSIFLNLDEEDDDEDSH 382
R DLERR+G QLD A L+D+L+PS H T++D ++V R I +N ++ D+
Sbjct: 328 RLDLERRLGSQLDMATLDDLLIPSFRHA--GDTLFDIDTVHR---ILVNFSQQGGDDS-- 387
Query: 383 LRDESEMMCDFDSPGSPKQSAILKVSKLLDNYLAEVALDSNLMPSKFIALAELLPDHARA 442
++ E + + DSP SP Q+A+ KV+KL+D+YLAE+A D+NL SKF+ +AE LP HAR
Sbjct: 388 --EDEESVFECDSPHSPSQTAMFKVAKLVDSYLAEIAPDANLDLSKFLLIAEALPPHART 447
Query: 443 VSDGLYRAVDIFLKVHPNIKDSERYRLCKTIDCQKLSQEACSHAAQNERLPVQMAVQVLY 502
+ DGLYRA+D++LK H + DS++ +L K ID QKLSQEA +HAAQNERLP+Q VQVLY
Sbjct: 448 LHDGLYRAIDLYLKAHQGLSDSDKKKLSKLIDFQKLSQEAGAHAAQNERLPLQSIVQVLY 507
Query: 503 FEQIRLRNAMNGNHNQLFFGSTNGSQFPLRSSSGAGSGAISPRDNYASVRRENRELKLEV 562
FEQ++LR+++ +++ Q R +SGA S +SP+DNYAS+RRENRELKLE+
Sbjct: 508 FEQLKLRSSLCSSYSDEEPKPKQQQQQSWRINSGALSATMSPKDNYASLRRENRELKLEL 567
Query: 563 ARMRMRLTDLEKDHVSMKQELVKTHPANKLFKSFTKKLSKLN 602
AR+RMRL DLEK+H+ MK+++ ++H + K SF+KK+ KL+
Sbjct: 568 ARLRMRLNDLEKEHICMKRDMQRSH-SRKFMSSFSKKMGKLS 580
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SA69 | 7.8e-253 | 72.70 | BTB/POZ domain-containing protein At1g03010 OS=Arabidopsis thaliana OX=3702 GN=A... | [more] |
O82253 | 2.5e-214 | 62.80 | BTB/POZ domain-containing protein SETH6 OS=Arabidopsis thaliana OX=3702 GN=SETH6... | [more] |
Q9FKB6 | 4.4e-139 | 47.25 | BTB/POZ domain-containing protein At5g48800 OS=Arabidopsis thaliana OX=3702 GN=A... | [more] |
Q9C9Z7 | 1.7e-122 | 44.71 | BTB/POZ domain-containing protein At3g08570 OS=Arabidopsis thaliana OX=3702 GN=A... | [more] |
Q66GP0 | 8.7e-119 | 41.00 | BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis thaliana OX=3702 GN=SR1I... | [more] |