CmaCh08G003630 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G003630
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RING-type E3 ubiquitin transferase
Location	Cma_Chr08: 2088339 .. 2096022 (+)
RNA-Seq Expression	CmaCh08G003630
Synteny	CmaCh08G003630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAGTCGTTAGGATAAAGCGCGATAGGATGTTTCTCTCGCCAGTGGCCGCACCTGAGAGCAACACGGTCGATTGAATTGAACTCAGTTCCCAACCCTTAATCACTTCCTTCACCCATTCTTCATCCAATTTTCCTTACCAGATTTCAATCAGTCTGCAATCCAATCGAGAATTCCACCTCCGAAGACCCCAAATTCCTCTGCAGTTCCTTCCCTCTTCCCGCGAGAAAAACCGTTGCCGAATTTTTATGTTTCCTCGTTCATTTTCTGTGGCTCTGTTGCTTCAGCTCTGTCGTTTATACGTATTATGAAGAGTAGTACATGGTTCGAGATCTGAAATTGGAATCTACTACCTGTTGAGGATGCTTCCGTGGGGAGGTCTTAGTTGCTGTTTGAGTGCAGCTGCTCTCTATCTTCTTGGAAGGAGTAGTGGCCGGTAAGTTCTTGTTTCTTTAATTTTGGACTTTTCGTGTTTGCATATTGTGAGGAATTACTCATTTGCAAGTTATAGATATGCACCGAAGTTCGCATAGACTAATTTGTTGTTGTTATGGCGTCATAGGGATGCGGAGTTACTGAAATCTGTTACGAGGGTCGATCAGTTGAAGGAACTGGGTAAGCGATTCGCTTTTTTTGAAAGATACAATTATCATTTGGTTTGCTTTCAGTTTTCTAAAATTATTGTCAGAGAGAGGTCGATTTTATGGTGCAGGATATTGTAATTAGGTTCAGGGTCCGCCCTCGCGGTCATTATTTCAATTTGCCATCCTAATCTCTCATTTTAGGAAAGAGTTGCCGCCAGATTGTGGCGGCTTCTTTCCCCCCTCAGAACCTTTAGATGTAGGCTTAAACCATAATCTTTTGTTTCTCTCTCGACTCTCTTACGACCTACTGCATAATACTGCTAGTCACATAGTTCCAGCCTCCAATAATTTCTCGGAAGGCCATATTTTGTGGACAATGTTTAGTGTAATAAAATTTATGAGGGTCTTAGGATTGTGAAACCCCAACAAGTAGTGTGCCTGCCCTGTGTCACAATCATACATTTTCAATCGTATGACGTCATGATCTTGACACGCTCATGACAAGCTTAATGGAAACTCAAGCCTCATTCACATTTTTCATCCGGCTTTGTGGCTTCGTCGAACCTTACGCGAGGTTCTCCTTTGCCAATTGAACACAACTCATGTAGAATCTCATCTTGTACAGCCACACATATCGCATGCATGTTCAATCGTCTGTGACCTTAATCAATCGACTTGCCTCTACACTGGTCAAGATTTGGCTCGACCTTGCCTCTGTTCTAGGACAAGGTCATTCATATGCGTCGTCACATCTCATCTTATCATCTACAACACAACCTTCATATCGTGATGTCATTGGTCATCGTAACCTACACGGACATGTCTATTGAGAACTGACCCCATGTGTCGATCATATAATTAGTGCCTCTTCAACATCCATCCATCTGAGTTCTATTAAGGCCACAATCCTCTCGTATCTATGGCAAGTCATTTGCGAACATCGTACCGGACAACAGGTGCATATTCCAACCTCTGACACATTGGCTGGGGTGCAATGCCAGAACACCCGTGTAGTTCGACACTATCCTTGAAAAACTCATTTTGAAGGAGGTCACCCGAAACACTTGTCCACATTGTGACACACGTATGTACCATAGGGTAGCTCGGTTAGGCCACAAGGCCTAGGGGTGGTGGAGGGTTAACACCATACCTCCCCTGTAGTACATTCTGAAGTATTTTTGGTTTGATAGGACAAGACATGATTTTGACGAACGGTCATATGATCTCGTGGTGCGTTCGTCCAGTATTCGATTGACACCAAATTTGGCAACCTTTCATCTTTCATATGGACGGACTTAACTCTAGAGCTAAATGTCCAAACTCTTTTAGGAACCTTGACTTTCAAGGTTAAGGCCTGGGGCCCTTATCAAGCCTATCTTTGACACTCATGTTAACATTATGCCTCTATCTTGCATATGTCTCAACTTGGCTTCAATGCACACTTTATATGGTGTATTGGATGATGCACCGTCCTCCTCGGTCACATCATGACACTTGTCTTGTCTCGGCCCTTGCATGATCAATTGGGCGCCACTTCTGTGTCACCACCTCGTCATGTCTGCACATGAGGGTCACAATTTACTTTCTTCATGGCATGGTTATGACACCCTGCACTCTCTCAAATTTTCCTTTTCCAAGTCCATTTTTATGTCTGATATTAATTAACAGCCCCCCAACATCTATATTGAAAAGAACGATCACTAATCACCATGTGTTCGTGTTCCGCATATTTCTGAACGATGGCGGGACCTTTTTGAGTTAAAAACATCAGGATTAAATAATGAGATTTGGATTTAATATTCTAAGTCTTCTTGATAACCAAATATAGTAGAGTTAGATAGTTGTTCTGAGGGATTAGTTCACATGCATGCATACGGGCTCAATTCTCATGGACGTATAAAAATGAAGGACTAAAGTGATATTTGTGAAACTTCATGACCCAAGATATTCTTTTTGTTTTCTAGACAACTGCTAAATTAAACCGACGAGTGCTTTCTAGTGCTATTTTTGTTCATTTTGATTTCAATAACCTTTACTAAGAGTCATTTCTTTTGGATCATGGCTATGGAGGTGATGTTGCATGAACTGATACCTTCTTTTTTCAGTTTGTGGTTATTAGTAAGATAAACTCCTTGCATATTGTTCATAGGGGGCTTGTTCTTTGTTCTTGTAACCCTACCGGCATGTTTTGGTACAGAAGCTGTTGAGGATAAGGAATGTCTTGTTCTTTTGCATTTCCTGTTTGGTTTAAATTGTTATTGGAGGTGAGTCATGAGTTAGCGACCACCATTTTTTGGGTGGTTTGCTTTTTTTTTTTAAATCCCAAAGTGTGACTAATACGAATTAGAGGCCCTTTTTGTAGAGTCTAGTGTCTAAGGTTTTTGTTTTCTCTTGGAATAGATTGGGCTTTTGATAACCAGAGTTTCAATTTCCATTTTGATATATTTTTCATTATATCAATGAATAGGGTTTTTTGTTTCAGTATTAACAAACGCTATAGAAATTTTATGTTGCCGTTTTTAAAATTCCCCATTGTGTTGCTGTTATGTTAACCATGAGCAACCCCAAGAGGTGTCTGGGTGGGAAGGGTTTTAGGTGTTTGGTGATACCTACTATGGTCTTGGGTTCAAGCCTCAACTTGAAAACTTAGTAACTTACGACCCTTATTGTCTCCTGGAGTTGGCCTTGGAGTGTGAAGCCTCATAAGGATCAGTGGGGTGAGCTATGAGCATAGTTGGAGGAGTTCCTCTTGATACTCCAATTATTTAAAGAAAAAAAACAAAAAGGAAACCACAAACATCTAATTTGGTTGTCTTTTGTATCATCATGAACTTTAAGGCCACAGGCCAATGTCAAGGATGTTGTTCACTAGGCATCATTACTCACAGGCACATGCTTTGTACTTCAATTGTTTAGGGAAATAGGCCATCCTTAAAAAAGCTAATGGAAAGGAAGCGAGGGAAACTTTTAAAAAGCAATTGTTAGGCTTGTTTTAACACATTTGTTACGTAAACCAGGGAAATTCTTTCTAGAACCGAGAACAATTCTCAAAATTAAATTCTTTGCTTGGCTTATTCCTCATTGGGTAAAATTCTGTTGGTCTTTAGGCTCTAGCTTGCTAGGTTGTATTCTCAAAATATATGGGTGAAATGCTTTCTAGGAGTATTGTATTATCTTGGAGAAGGCCATGGTTGGATGTGTTGTTTAAGATGCCTAAGAATAGGATGTCTGAGAATAAGACGCATGAGAATTAAATAACTGCGTTTGGTGTTCCACGAGAATTGTATCAAAATTTTATATAAATATATAATATTTTGGGTTGACTTCCACGTATACTTCCAACCATTTTGTTTTACTACTTATTTTAGATAATTTGTTATTTTTGTAAATCAAGTTCTTAAATAATTTTGACTATTTTAATTTTAATTTAATTTTTAGTAGTTAATAAATATATTAGGAATAGTATGCCTTCAGTTTTAGGTTTTCGAATTTATTTAGCCATCCATCTTAATAATTATTCTCAAATGAATGATTTTAATGAAGTTATATAAAATTTTAATGGTAAATAATTCTTACAATAATCAAATTGAAGAACTAGCTATGCATCTTGTTATGGTAAATAATCCTCAAGTTATTTATTTTAGAAACATTTCTCTATTTTTCAGCTCAATTGCTTGAGGCTGAATGTGTATTACCTCTGGTTGTTGCAATTTCTGGGAGAGTAAGCTCTGATACACCAATAAATTGCGAGTTTAGTGGGCTGAGGGGAGTAATTGTGGAGGAAACGGTAATGGATGTTATTTTCTTTGTGAGAGTACATTCAACACGACATTGAACCTATGTCAGTTCTGTTTTTTTCCACCTCAGGCAGAACAACACTTTCTGAAGCACAACGATGCAGGATCATGGATTCAGGATTCTGCACTGATGCTCTCCATGAGCAAAGAAGTTCCTTGGTATCTGGTGAGAAATATACTAATTCTATAATGCATAATTGTTTGGGTCAACCCATGTGTAGAGTTGTGTTCATTCTTCACATTTGATGATTGGTGTTATCCCATAAAGTTGTTTTTTTTTTTTTTTTTTACTTTTTTATCAGGATGATGGGACTGGTCGTGCATTTGTGGTGGGAGCTCGAAGTGCCACAAATTTTATATTACCAGTAGTGAGTGAGATATTTGAAGAGTCTGGCAGATCTCTTATGCGTGGAACCTTAGATTATCTCCAAGGTCTTAAGGTCTGTTTTGATCAGTTAATGTTACTTTTAGTACAACGTGCTTGCAGTGGTCTTATTCAACTAATGTTATATTTTTTTTTCCTTTTCAAGATGCTTGGAGTTAAGCAAATAGAGCGTGTACTACCTACTGGCACGTCCTTGACTGTCGTTGGTGAGGTATGGAATTATCATTTTTCATTTGTGCAAACAGCATTCACGATCATGTCCTTATTTACAAAGCAGAACTATGGGAAGCTGAGAAATTTAATGTACTATCTTGGTTCAATTACAAATCATATTATTAGTCTAATACCAGTTACCACCTTCACTTATGTTCTCAGTTCAAATTGAGAAGTCTTTATGTGGAAAATGACTGAATGTTATTACAAATCATATTATTAGACTATAAATGCTTGGTGTTCCTTCACTATAAGGTATAAGACCATACCCAGATAGGAAGCAATTTAATATAGTAACAACAAGTTTCTGTATCATTCTAAAACAATGTATTTAGTGACAAAATCACTATTGTCGATTGTCCAAAGGAAAGCAATTTAATTATTTCATTATCCACAGCTTAGCAGAATGGATGTTTCTTGTGGTCAAATTTTAGTGTTACCATACTCCCAACATTCATTAATTGTCTTTTATATCTCTTTAAATTGTAAAAATTAGATCACTTAAAATAATAGGATCTATAGGATTTAAAATTATTATTGTATTGTACATAAAATCTGTTTTTGAGTCTAGCTTATGTTACTCCATGCAGCAATCATCTTTAAGTCTCTTAATATAGGTAGGCTTACATGATACATGTAGCACTCGTTCTATATTTTAAAACACATTTATGCTTCCGATTGCTCAGTCTTCAAATCTTTGATTGGCCAAAATGTAGTTGTAAAGGAACAAAATAATTAATTATGCATGTCTAGACACAAAATTAAAAGGTTATATTGTGAATTACTTATTATTATTCTTCTGTTTGATCCTTGAGATTATGAATAGGCTGCCAAAGATGACATTGGTACGATTAGAATACAACGACCACACAAAGGGCCATTTTATGTCTCCCCAAAAACAATCGATCAACTCATAAGCAATCTTGGGAAATGGGCCAGGTTGATTATGTACCCTTATCTGCATAGATTCTTTTAATCTCTTCATTTTCCCATAATGTAATGTTTGCAACGGGCATTCATTTCTGTGGCTTGTTATGACATGGATACTTACTAGGTGGTACAAGTATGCTTCCCTGGGTTTGAGCATATTTGGTTTGTATCTCGTCACAAAGCATGCTATTCTTTATCTCTTGGGGAGAAGGCGTCGCTGGAAATATCAGAAAAGGTACGCTGCCTTCAGTTTGTTTACCTGTTAAAGTTCTTTTCATTTCTTCGTTTTCAGATTTGATATTTGATGTTGACTGCTCAGCGTTGTGAATAAGTATATCTAGAAAGCATTTATGATATGTATCACTTTAAGAGACGACCACCTATAAAGATTGATGCTTATGAAATACTAGTCAACCTTGTGTAGATGACCAACTATAAAGATTGATGCTTATGAAATACTAGTCAACCTTGTGGATAACCACTAGTGTCTCTTTTTCCGCCTCATGTTTTTATTTATTTATTTCTCTATGAGCTAGCTGAGAAATATTCTGATCGTACAGGGTCCTAGCTGCAGCTGCCAAGAGATCAAACCAAGAAAATGAAGGTAGAATCCCAACTTTTTGATATGTTGCCTTCTGAATTATATATGCACATCGATGAAACTTAAAATACATTGCTTCAGGGGAAAATGGTACGACTAACAATGGCTCAGATGGTACGAAGAGAGACCGTTCAATGCCAGATCTTTGTGTAATATGTCTTGAGAGAGACTACAATGCCGTTTTTGTCCCGTAAGAGCTCTTTTTCTTCATTCTCCCAACACATACACACGCAAATGTTTCTCACATGCCTGAAACATCTCTATTTAGAGAAGAGAGAAGCAGTGAAATTCTGTAATATTTTCACCAAGTCTAACATGAATGGTGAACAGTCCAAGGAAACACTACAATATTCTTAGAAGAGAGAATTTTAAAGAGATCTTAGATAAGTTTGGTTTTCTTGCCTTTGGTAGCTGCTAATAGTTGGACTTGGAAATGGAATCAGAATACGCCTGTTTTTGATGAGTTAGTGTGGGAGTGGAAGTCTACTCTTAATGGCACTAGAAGTACACCTTGTTTTCTTTATGGGTTTACTGTTGTAAGAAAACATGACTAGGTCCACTTGGTGTTACTTTCTCATGATTGGGACTAAATGGTCAACTTCTAGATTACCCTTGCCACATTGCGCACCTTTTTTTTAAATACACTTTTTCAAGTATATTTAAAATTTACTCGAACAATTTACTTTTAATTTTCTAATCGGGCATCTTTTTCTTGGCTTATGTTTCCTCGCTTGGCTCTTTTTCCCCCTCCTTTTGTTATTTGTTATGTTGTTTTCCAAATTACAATCTTATAAGTGCTATATCCTTATATGGACAATGGAATCTTCCTCTTACGTAATTTTACATGTTAGAATTGTTTTTATTTGAATTATTCATATGCTTATTATAGAACTATTTGATTTTCTTTTCCTAATGGCGTATCACTATCTAGTTATTTGTACACTATATCAGGCCTGAAGGAACTCTTACGTCTTTTATGTACCTTGTCCTGATTGAATCAAATTAATTGCAGTTCAGCATTCTATCATCTCAGTAATTAATCCAAAAAAACTGGTCTGCTGGCTTGATTTCAGGTGCGGCCATATGTGCTGCTGTGTAGCGTGTTGTTCACATTTAACGAACTGTCCACTCTGTCGTCGACGAATTGAGCTGGTAGTAAAGACATACCGCCATTGA

mRNA sequence

TGAGTCGTTAGGATAAAGCGCGATAGGATGTTTCTCTCGCCAGTGGCCGCACCTGAGAGCAACACGGTCGATTGAATTGAACTCAGTTCCCAACCCTTAATCACTTCCTTCACCCATTCTTCATCCAATTTTCCTTACCAGATTTCAATCAGTCTGCAATCCAATCGAGAATTCCACCTCCGAAGACCCCAAATTCCTCTGCAGTTCCTTCCCTCTTCCCGCGAGAAAAACCGTTGCCGAATTTTTATGTTTCCTCGTTCATTTTCTGTGGCTCTGTTGCTTCAGCTCTGTCGTTTATACGTATTATGAAGAGTAGTACATGGTTCGAGATCTGAAATTGGAATCTACTACCTGTTGAGGATGCTTCCGTGGGGAGGTCTTAGTTGCTGTTTGAGTGCAGCTGCTCTCTATCTTCTTGGAAGGAGTAGTGGCCGGGATGCGGAGTTACTGAAATCTGTTACGAGGGTCGATCAGTTGAAGGAACTGGCTCAATTGCTTGAGGCTGAATGTGTATTACCTCTGGTTGTTGCAATTTCTGGGAGAGTAAGCTCTGATACACCAATAAATTGCGAGTTTAGTGGGCTGAGGGGAGTAATTGTGGAGGAAACGGCAGAACAACACTTTCTGAAGCACAACGATGCAGGATCATGGATTCAGGATTCTGCACTGATGCTCTCCATGAGCAAAGAAGTTCCTTGGTATCTGGATGATGGGACTGGTCGTGCATTTGTGGTGGGAGCTCGAAGTGCCACAAATTTTATATTACCAGTAGTGAGTGAGATATTTGAAGAGTCTGGCAGATCTCTTATGCGTGGAACCTTAGATTATCTCCAAGGTCTTAAGATGCTTGGAGTTAAGCAAATAGAGCGTGTACTACCTACTGGCACGTCCTTGACTGTCGTTGGTGAGGCTGCCAAAGATGACATTGGTACGATTAGAATACAACGACCACACAAAGGGCCATTTTATGTCTCCCCAAAAACAATCGATCAACTCATAAGCAATCTTGGGAAATGGGCCAGGTGGTACAAGTATGCTTCCCTGGGTTTGAGCATATTTGGTTTGTATCTCGTCACAAAGCATGCTATTCTTTATCTCTTGGGGAGAAGGCGTCGCTGGAAATATCAGAAAAGGGTCCTAGCTGCAGCTGCCAAGAGATCAAACCAAGAAAATGAAGGGGAAAATGGTACGACTAACAATGGCTCAGATGGTACGAAGAGAGACCGTTCAATGCCAGATCTTTGTGTAATATGTCTTGAGAGAGACTACAATGCCGTTTTTGTCCCGTGCGGCCATATGTGCTGCTGTGTAGCGTGTTGTTCACATTTAACGAACTGTCCACTCTGTCGTCGACGAATTGAGCTGGTAGTAAAGACATACCGCCATTGA

Coding sequence (CDS)

ATGCTTCCGTGGGGAGGTCTTAGTTGCTGTTTGAGTGCAGCTGCTCTCTATCTTCTTGGAAGGAGTAGTGGCCGGGATGCGGAGTTACTGAAATCTGTTACGAGGGTCGATCAGTTGAAGGAACTGGCTCAATTGCTTGAGGCTGAATGTGTATTACCTCTGGTTGTTGCAATTTCTGGGAGAGTAAGCTCTGATACACCAATAAATTGCGAGTTTAGTGGGCTGAGGGGAGTAATTGTGGAGGAAACGGCAGAACAACACTTTCTGAAGCACAACGATGCAGGATCATGGATTCAGGATTCTGCACTGATGCTCTCCATGAGCAAAGAAGTTCCTTGGTATCTGGATGATGGGACTGGTCGTGCATTTGTGGTGGGAGCTCGAAGTGCCACAAATTTTATATTACCAGTAGTGAGTGAGATATTTGAAGAGTCTGGCAGATCTCTTATGCGTGGAACCTTAGATTATCTCCAAGGTCTTAAGATGCTTGGAGTTAAGCAAATAGAGCGTGTACTACCTACTGGCACGTCCTTGACTGTCGTTGGTGAGGCTGCCAAAGATGACATTGGTACGATTAGAATACAACGACCACACAAAGGGCCATTTTATGTCTCCCCAAAAACAATCGATCAACTCATAAGCAATCTTGGGAAATGGGCCAGGTGGTACAAGTATGCTTCCCTGGGTTTGAGCATATTTGGTTTGTATCTCGTCACAAAGCATGCTATTCTTTATCTCTTGGGGAGAAGGCGTCGCTGGAAATATCAGAAAAGGGTCCTAGCTGCAGCTGCCAAGAGATCAAACCAAGAAAATGAAGGGGAAAATGGTACGACTAACAATGGCTCAGATGGTACGAAGAGAGACCGTTCAATGCCAGATCTTTGTGTAATATGTCTTGAGAGAGACTACAATGCCGTTTTTGTCCCGTGCGGCCATATGTGCTGCTGTGTAGCGTGTTGTTCACATTTAACGAACTGTCCACTCTGTCGTCGACGAATTGAGCTGGTAGTAAAGACATACCGCCATTGA

Protein sequence

MLPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVDQLKELAQLLEAECVLPLVVAISGRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGTGRAFVVGARSATNFILPVVSEIFEESGRSLMRGTLDYLQGLKMLGVKQIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASLGLSIFGLYLVTKHAILYLLGRRRRWKYQKRVLAAAAKRSNQENEGENGTTNNGSDGTKRDRSMPDLCVICLERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTYRH

Homology

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BLAST of CmaCh08G003630 vs. ExPASy Swiss-Prot
Match: Q8L7N4 (E3 ubiquitin-protein ligase SP1 OS=Arabidopsis thaliana OX=3702 GN=SP1 PE=1 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 8.2e-148
Identity = 254/343 (74.05%), Postives = 299/343 (87.17%), Query Frame = 0


Query: 1   MLPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVDQLKELAQLLEAEC-VLPLVVAIS 60
           M+PWGG++CCLSAAALYLLGRSSGRDAE+L++VTRV+QLKELAQLLE +  +LP +VA+S
Sbjct: 1   MIPWGGVTCCLSAAALYLLGRSSGRDAEVLETVTRVNQLKELAQLLELDSKILPFIVAVS 60

Query: 61  GRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT 120
           GRV S+TPI CE SG+RGVIVEETAEQHFLKHN+ GSW+QDSALMLSMSKEVPW+LDDGT
Sbjct: 61  GRVGSETPIKCEHSGIRGVIVEETAEQHFLKHNETGSWVQDSALMLSMSKEVPWFLDDGT 120

Query: 121 GRAFVVGARSATNFILPVVSEIFEESGRSLMRGTLDYLQGLKMLGVKQIERVLPTGTSLT 180
            R  V+GAR AT F L V SE+FEESGRSL+RGTLDYLQGLKMLGVK+IERVLPTG  LT
Sbjct: 121 SRVHVMGARGATGFALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGIPLT 180

Query: 181 VVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASLGLSIFGLYLVT 240
           +VGEA KDDIG  RIQ+P +GPFYVS K++DQLISNLGKW+R YKYAS+G ++ G++L+T
Sbjct: 181 IVGEAVKDDIGEFRIQKPDRGPFYVSSKSLDQLISNLGKWSRLYKYASMGFTVLGVFLIT 240

Query: 241 KHAILYLLGRRRRWKYQKRVLAAAAKRSNQENEGENGTTNNGSDGTKRDRSMPDLCVICL 300
           KH I  +L RRRR + QKRVL AAAKR+  E+EG NGT  + SD TK++ ++PDLCVICL
Sbjct: 241 KHVIDSVLERRRRRQLQKRVLDAAAKRAELESEGSNGTRESISDSTKKEDAVPDLCVICL 300

Query: 301 ERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTYRH 343
           E++YNAVFVPCGHMCCC AC SHLT+CPLCRRRI+L VKTYRH
Sbjct: 301 EQEYNAVFVPCGHMCCCTACSSHLTSCPLCRRRIDLAVKTYRH 343

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BLAST of CmaCh08G003630 vs. ExPASy Swiss-Prot
Match: Q94HV7 (E3 ubiquitin-protein ligase SPL1 OS=Arabidopsis thaliana OX=3702 GN=SPL1 PE=2 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 2.7e-90
Identity = 178/351 (50.71%), Postives = 235/351 (66.95%), Query Frame = 0


Query: 1   MLPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVDQLKELAQLLEAEC-VLPLVVAIS 60
           M+   G +CCL   ALYLL RS+GRD   +KS+TRV QLK+L QL+E E  V+PL++A+S
Sbjct: 1   MIHLAGFTCCLGGVALYLLTRSTGRD---IKSITRVYQLKDLEQLVEVESKVVPLIIAVS 60

Query: 61  GRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT 120
           G V S+TPI CE S + GV ++ TAEQ  L+ N   SW+++S LM  M+KEVPWYLDDGT
Sbjct: 61  GDVGSETPIKCEHSYVLGVFLKRTAEQQVLRRNWRFSWVRNSTLMQPMTKEVPWYLDDGT 120

Query: 121 GRAFVVGARSATNFILPVVSEIFEESGR-SLMRGTLDYLQGLKMLGVKQIERVLPTGTSL 180
           GR  V  ++      L V S++FE++   SL++G L YL+G K+LGV+ +ERV+P GT L
Sbjct: 121 GRVNVDVSQGELGLALTVGSDVFEKAEPVSLVQGALGYLKGFKILGVRHVERVVPIGTPL 180

Query: 181 TVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASLGLSIFGLYLV 240
           TVVGEA +D +G +RIQ+P +GPFYV+   +DQLIS LG  +R +KYAS+GL++ G+ L+
Sbjct: 181 TVVGEAVRDGMGNVRIQKPEQGPFYVTYIPLDQLISKLGDLSRRFKYASMGLTVLGVILI 240

Query: 241 TKHAILYL-------LGRRRRWKYQKRVLAAAAKRSNQENEGENGTTNNGSDGTKRDRSM 300
           +K  I Y+       L RRRR    KRV+ AAA+R+     G          GT RD   
Sbjct: 241 SKPVIEYILKRIEDTLERRRRQFALKRVVDAAARRAKPVTGG----------GTSRDGDT 300

Query: 301 PDLCVICLERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTYRH 343
           PDLCV+CL++ YN  FV CGHMCCC  C   L  CPLCR RI+ V+K YRH
Sbjct: 301 PDLCVVCLDQKYNTAFVECGHMCCCTPCSLQLRTCPLCRERIQQVLKIYRH 338

[Close]

BLAST of CmaCh08G003630 vs. ExPASy Swiss-Prot
Match: Q557E7 (E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum OX=44689 GN=cblA-1 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 30/81 (37.04%), Postives = 43/81 (53.09%), Query Frame = 0


Query: 267 SNQENEGENGTTNNGSDGTKRDRS------MPDLCVICLERDYNAVFVPCGHMCCCVACC 326
           +N  N   N   NN S  TKR+ +        DLC +C++ + N VF+ CGH+ CC  C 
Sbjct: 584 NNNNNNNNNNNNNNSSSTTKRNNNNNGSDESKDLCTVCMDNEINTVFLECGHLSCCSLCS 643

Query: 327 SHLTNCPLCRRRIELVVKTYR 342
             L  CP+CR RI  V+  ++
Sbjct: 644 VKLKKCPICRSRITRVINIFK 664

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BLAST of CmaCh08G003630 vs. ExPASy Swiss-Prot
Match: Q80ZI6 (E3 ubiquitin-protein ligase LRSAM1 OS=Mus musculus OX=10090 GN=Lrsam1 PE=1 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-08
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 0


Query: 295 CVICLERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTY 341
           CV+CLER+   VF+ CGH+CCC  CC  L  CPLCR+ I   ++ Y
Sbjct: 679 CVVCLEREAQMVFLTCGHVCCCQQCCQPLRTCPLCRQEISQRLRIY 724

[Close]

BLAST of CmaCh08G003630 vs. ExPASy Swiss-Prot
Match: Q9SYH3 (E3 ubiquitin-protein ligase SPL2 OS=Arabidopsis thaliana OX=3702 GN=SPL2 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.6e-08
Identity = 50/183 (27.32%), Postives = 91/183 (49.73%), Query Frame = 0


Query: 163 LGVKQIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARW 222
           +G+  IE++LP G  +T VG  + ++ G   I+     P+++S  T D++I +L +   +
Sbjct: 212 VGLLDIEKILPPGKDITAVGIYSFNN-GVPEIKSCQDLPYFLSEMTKDKMIEDLMEQTNF 271

Query: 223 YKYASLGLSIFGLYLVTKHAILYLLGRRRRWKYQKRVLAAAAKRSNQENEGENGTTNNGS 282
               S+ L I  + +++ +A +    + ++W +Q R L      S  ++E E+   +   
Sbjct: 272 IFLGSVILGIVSVGILS-YAAVRTWNKWKQWNHQ-RELPQRPNDSVVDDEPED--ADEIP 331

Query: 283 DGTKRDRSMPDLCVICLERDYNAVFVPCGHMCCCVACCSHL-----TNCPLCRRRIELVV 341
           DG        +LCVIC+ R     F+PCGH+ CC  C S +       CP+C + I   +
Sbjct: 332 DG--------ELCVICVSRRRVPAFIPCGHVVCCRRCASTVERELNPKCPVCLQSIRGSM 381

[Close]

BLAST of CmaCh08G003630 vs. TAIR 10
Match: AT1G63900.1 (E3 Ubiquitin ligase family protein )

HSP 1 Score: 524.6 bits (1350), Expect = 5.8e-149
Identity = 254/343 (74.05%), Postives = 299/343 (87.17%), Query Frame = 0


Query: 1   MLPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVDQLKELAQLLEAEC-VLPLVVAIS 60
           M+PWGG++CCLSAAALYLLGRSSGRDAE+L++VTRV+QLKELAQLLE +  +LP +VA+S
Sbjct: 1   MIPWGGVTCCLSAAALYLLGRSSGRDAEVLETVTRVNQLKELAQLLELDSKILPFIVAVS 60

Query: 61  GRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT 120
           GRV S+TPI CE SG+RGVIVEETAEQHFLKHN+ GSW+QDSALMLSMSKEVPW+LDDGT
Sbjct: 61  GRVGSETPIKCEHSGIRGVIVEETAEQHFLKHNETGSWVQDSALMLSMSKEVPWFLDDGT 120

Query: 121 GRAFVVGARSATNFILPVVSEIFEESGRSLMRGTLDYLQGLKMLGVKQIERVLPTGTSLT 180
            R  V+GAR AT F L V SE+FEESGRSL+RGTLDYLQGLKMLGVK+IERVLPTG  LT
Sbjct: 121 SRVHVMGARGATGFALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGIPLT 180

Query: 181 VVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASLGLSIFGLYLVT 240
           +VGEA KDDIG  RIQ+P +GPFYVS K++DQLISNLGKW+R YKYAS+G ++ G++L+T
Sbjct: 181 IVGEAVKDDIGEFRIQKPDRGPFYVSSKSLDQLISNLGKWSRLYKYASMGFTVLGVFLIT 240

Query: 241 KHAILYLLGRRRRWKYQKRVLAAAAKRSNQENEGENGTTNNGSDGTKRDRSMPDLCVICL 300
           KH I  +L RRRR + QKRVL AAAKR+  E+EG NGT  + SD TK++ ++PDLCVICL
Sbjct: 241 KHVIDSVLERRRRRQLQKRVLDAAAKRAELESEGSNGTRESISDSTKKEDAVPDLCVICL 300

Query: 301 ERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTYRH 343
           E++YNAVFVPCGHMCCC AC SHLT+CPLCRRRI+L VKTYRH
Sbjct: 301 EQEYNAVFVPCGHMCCCTACSSHLTSCPLCRRRIDLAVKTYRH 343

[Close]

BLAST of CmaCh08G003630 vs. TAIR 10
Match: AT1G63900.2 (E3 Ubiquitin ligase family protein )

HSP 1 Score: 518.8 bits (1335), Expect = 3.2e-147
Identity = 254/347 (73.20%), Postives = 299/347 (86.17%), Query Frame = 0


Query: 1   MLPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVDQLKELAQLLEAEC-VLPLVVAIS 60
           M+PWGG++CCLSAAALYLLGRSSGRDAE+L++VTRV+QLKELAQLLE +  +LP +VA+S
Sbjct: 1   MIPWGGVTCCLSAAALYLLGRSSGRDAEVLETVTRVNQLKELAQLLELDSKILPFIVAVS 60

Query: 61  GRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT 120
           GRV S+TPI CE SG+RGVIVEETAEQHFLKHN+ GSW+QDSALMLSMSKEVPW+LDDGT
Sbjct: 61  GRVGSETPIKCEHSGIRGVIVEETAEQHFLKHNETGSWVQDSALMLSMSKEVPWFLDDGT 120

Query: 121 GRAFVVGARSATNFILPVVSEIFEESGRSLMRGTLDYLQGLKMLGVKQIERVLPTGTSLT 180
            R  V+GAR AT F L V SE+FEESGRSL+RGTLDYLQGLKMLGVK+IERVLPTG  LT
Sbjct: 121 SRVHVMGARGATGFALTVGSEVFEESGRSLVRGTLDYLQGLKMLGVKRIERVLPTGIPLT 180

Query: 181 VVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASLGLSIFGLYLVT 240
           +VGEA KDDIG  RIQ+P +GPFYVS K++DQLISNLGKW+R YKYAS+G ++ G++L+T
Sbjct: 181 IVGEAVKDDIGEFRIQKPDRGPFYVSSKSLDQLISNLGKWSRLYKYASMGFTVLGVFLIT 240

Query: 241 KHAILYLLGRRRRWKYQK----RVLAAAAKRSNQENEGENGTTNNGSDGTKRDRSMPDLC 300
           KH I  +L RRRR + QK    RVL AAAKR+  E+EG NGT  + SD TK++ ++PDLC
Sbjct: 241 KHVIDSVLERRRRRQLQKSCFCRVLDAAAKRAELESEGSNGTRESISDSTKKEDAVPDLC 300

Query: 301 VICLERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTYRH 343
           VICLE++YNAVFVPCGHMCCC AC SHLT+CPLCRRRI+L VKTYRH
Sbjct: 301 VICLEQEYNAVFVPCGHMCCCTACSSHLTSCPLCRRRIDLAVKTYRH 347

[Close]

BLAST of CmaCh08G003630 vs. TAIR 10
Match: AT1G59560.1 (E3 Ubiquitin ligase family protein )

HSP 1 Score: 333.6 bits (854), Expect = 1.9e-91
Identity = 178/351 (50.71%), Postives = 235/351 (66.95%), Query Frame = 0


Query: 1   MLPWGGLSCCLSAAALYLLGRSSGRDAELLKSVTRVDQLKELAQLLEAEC-VLPLVVAIS 60
           M+   G +CCL   ALYLL RS+GRD   +KS+TRV QLK+L QL+E E  V+PL++A+S
Sbjct: 1   MIHLAGFTCCLGGVALYLLTRSTGRD---IKSITRVYQLKDLEQLVEVESKVVPLIIAVS 60

Query: 61  GRVSSDTPINCEFSGLRGVIVEETAEQHFLKHNDAGSWIQDSALMLSMSKEVPWYLDDGT 120
           G V S+TPI CE S + GV ++ TAEQ  L+ N   SW+++S LM  M+KEVPWYLDDGT
Sbjct: 61  GDVGSETPIKCEHSYVLGVFLKRTAEQQVLRRNWRFSWVRNSTLMQPMTKEVPWYLDDGT 120

Query: 121 GRAFVVGARSATNFILPVVSEIFEESGR-SLMRGTLDYLQGLKMLGVKQIERVLPTGTSL 180
           GR  V  ++      L V S++FE++   SL++G L YL+G K+LGV+ +ERV+P GT L
Sbjct: 121 GRVNVDVSQGELGLALTVGSDVFEKAEPVSLVQGALGYLKGFKILGVRHVERVVPIGTPL 180

Query: 181 TVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARWYKYASLGLSIFGLYLV 240
           TVVGEA +D +G +RIQ+P +GPFYV+   +DQLIS LG  +R +KYAS+GL++ G+ L+
Sbjct: 181 TVVGEAVRDGMGNVRIQKPEQGPFYVTYIPLDQLISKLGDLSRRFKYASMGLTVLGVILI 240

Query: 241 TKHAILYL-------LGRRRRWKYQKRVLAAAAKRSNQENEGENGTTNNGSDGTKRDRSM 300
           +K  I Y+       L RRRR    KRV+ AAA+R+     G          GT RD   
Sbjct: 241 SKPVIEYILKRIEDTLERRRRQFALKRVVDAAARRAKPVTGG----------GTSRDGDT 300

Query: 301 PDLCVICLERDYNAVFVPCGHMCCCVACCSHLTNCPLCRRRIELVVKTYRH 343
           PDLCV+CL++ YN  FV CGHMCCC  C   L  CPLCR RI+ V+K YRH
Sbjct: 301 PDLCVVCLDQKYNTAFVECGHMCCCTPCSLQLRTCPLCRERIQQVLKIYRH 338

[Close]

BLAST of CmaCh08G003630 vs. TAIR 10
Match: AT1G54150.1 (E3 Ubiquitin ligase family protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-09
Identity = 50/183 (27.32%), Postives = 91/183 (49.73%), Query Frame = 0


Query: 163 LGVKQIERVLPTGTSLTVVGEAAKDDIGTIRIQRPHKGPFYVSPKTIDQLISNLGKWARW 222
           +G+  IE++LP G  +T VG  + ++ G   I+     P+++S  T D++I +L +   +
Sbjct: 212 VGLLDIEKILPPGKDITAVGIYSFNN-GVPEIKSCQDLPYFLSEMTKDKMIEDLMEQTNF 271

Query: 223 YKYASLGLSIFGLYLVTKHAILYLLGRRRRWKYQKRVLAAAAKRSNQENEGENGTTNNGS 282
               S+ L I  + +++ +A +    + ++W +Q R L      S  ++E E+   +   
Sbjct: 272 IFLGSVILGIVSVGILS-YAAVRTWNKWKQWNHQ-RELPQRPNDSVVDDEPED--ADEIP 331

Query: 283 DGTKRDRSMPDLCVICLERDYNAVFVPCGHMCCCVACCSHL-----TNCPLCRRRIELVV 341
           DG        +LCVIC+ R     F+PCGH+ CC  C S +       CP+C + I   +
Sbjct: 332 DG--------ELCVICVSRRRVPAFIPCGHVVCCRRCASTVERELNPKCPVCLQSIRGSM 381

[Close]

BLAST of CmaCh08G003630 vs. TAIR 10
Match: AT3G23280.1 (XB3 ortholog 5 in Arabidopsis thaliana )

HSP 1 Score: 52.4 bits (124), Expect = 8.5e-07
Identity = 23/64 (35.94%), Postives = 38/64 (59.38%), Query Frame = 0


Query: 282 SDGTKRDRSMPDLCVICLERDYNAVFVPCGHMCCCVACCSHLTN----CPLCRRRIELVV 341
           ++G +++      C ICL+    AV VPCGH+  C++C   + +    CP+CR +I+ V+
Sbjct: 398 TEGERKEDGNTGTCAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVI 457

The following BLAST results are available for this feature:

BLAST of CmaCh08G003630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7N4	8.2e-148	74.05	E3 ubiquitin-protein ligase SP1 OS=Arabidopsis thaliana OX=3702 GN=SP1 PE=1 SV=1	[more]
Q94HV7	2.7e-90	50.71	E3 ubiquitin-protein ligase SPL1 OS=Arabidopsis thaliana OX=3702 GN=SPL1 PE=2 SV...	[more]
Q557E7	1.0e-09	37.04	E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum OX=44689 GN=cblA-1 ...	[more]
Q80ZI6	1.5e-08	52.17	E3 ubiquitin-protein ligase LRSAM1 OS=Mus musculus OX=10090 GN=Lrsam1 PE=1 SV=1	[more]
Q9SYH3	2.6e-08	27.32	E3 ubiquitin-protein ligase SPL2 OS=Arabidopsis thaliana OX=3702 GN=SPL2 PE=2 SV...	[more]

BLAST of CmaCh08G003630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G63900.1	5.8e-149	74.05	E3 Ubiquitin ligase family protein	[more]
AT1G63900.2	3.2e-147	73.20	E3 Ubiquitin ligase family protein	[more]
AT1G59560.1	1.9e-91	50.71	E3 Ubiquitin ligase family protein	[more]
AT1G54150.1	1.8e-09	27.32	E3 Ubiquitin ligase family protein	[more]
AT3G23280.1	8.5e-07	35.94	XB3 ortholog 5 in Arabidopsis thaliana	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 293..335 e-value: 6.3E-12 score: 45.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 266..287
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 268..285
None	No IPR available	CDD	cd16515	RING-HC_LRSAM1	coord: 294..333 e-value: 1.26295E-20 score: 81.5633
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 294..336
IPR022170	E3 Ubiquitin ligase MUL1-like	PFAM	PF12483	GIDE	coord: 86..235 e-value: 1.4E-36 score: 125.3
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 262..341 e-value: 2.5E-16 score: 60.8
IPR044231	E3 ubiquitin-protein ligase SP1-like	PANTHER	PTHR47568	FAMILY NOT NAMED	coord: 1..309
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 295..330 score: 11.132002

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G003630.1	CmaCh08G003630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006996	organelle organization
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity