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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAGGATTTTCCTTCTTGTTTCGGCGAAAATGGCGTCCAAATTGCAGATTCTTCGTCTTCTTCTTCTTCGTCGTCTTCGAGTATCAGTAAAGCCGCTCAAAACCTAGTCACCTGCGTCTACCAGTGTAAGTTACGCGGCCGATTGAGCTTCATCGTTCTAACATGGACCAAGCATTTGATGGGACAAGGTCTCTCGCTTCAAATCGAAAACTCTGCTAATCAATACCTCTGTAAGGTAGAAATTAAGCCGTGGCTGTTCTCCAAAAAGAGAGGATCGAAGATCGTCGACGTTGATTTCAATAAAATGGAGATATACTGGGATTTAGCAAACGCCAAATTCGGCTGCGGACCGGAGCCGGAGGAAGGATTCTTCGTTGCTGTGGTATTCGATCGAGAGCTCGTATTCCTCGTCGGTGATTTACCGACGGAAGCTTCCAAGAAGATCACCGGCGTCTCCACTACCACGGCCACGGCGGCGGTGTTTGTGGCGAGGAGAGAGCACGTGTTCGGGAAGAAATCGTACTACGCGAAGGCTCAATTCAGCGAGAAAGGAGAAACGCACAATCTGTGGATCGAATGCGATACTAGTGGAGGATTGAAGGAGCCGAGTTTAGTGATTCGAATCGACAGCAAGACGGCGATGCAGATCAAGAGGCTGAAATGGAAGTTCAGAGGGAATCATACAATTATGGTGGACGGAATTCCGGTGCAGGTCATGTGGGATGTTCATAATTGGCTCTTTGGAAGCTCCGCCATGAGTAGTGCTGTGTTCATGTTTCAAACGCATAAGAGCAGTGGAAGCCATAGCCAATCCAGTTTTGATTCTTCTTCTTCTTCTTCTACTACTTCTTCTTCTTACTGTCAACAGAGTAAAGATTCGAAGTTGCAGGGTTTGGATTTCTCCTTGATGTTATATGCTTGGAGAAATGAATGA mRNA sequence ATGAAGGATTTTCCTTCTTGTTTCGGCGAAAATGGCGTCCAAATTGCAGATTCTTCGTCTTCTTCTTCTTCGTCGTCTTCGAGTATCAGTAAAGCCGCTCAAAACCTAGTCACCTGCGTCTACCAGTGTAAGTTACGCGGCCGATTGAGCTTCATCGTTCTAACATGGACCAAGCATTTGATGGGACAAGGTCTCTCGCTTCAAATCGAAAACTCTGCTAATCAATACCTCTGTAAGGTAGAAATTAAGCCGTGGCTGTTCTCCAAAAAGAGAGGATCGAAGATCGTCGACGTTGATTTCAATAAAATGGAGATATACTGGGATTTAGCAAACGCCAAATTCGGCTGCGGACCGGAGCCGGAGGAAGGATTCTTCGTTGCTGTGGTATTCGATCGAGAGCTCGTATTCCTCGTCGGTGATTTACCGACGGAAGCTTCCAAGAAGATCACCGGCGTCTCCACTACCACGGCCACGGCGGCGGTGTTTGTGGCGAGGAGAGAGCACGTGTTCGGGAAGAAATCGTACTACGCGAAGGCTCAATTCAGCGAGAAAGGAGAAACGCACAATCTGTGGATCGAATGCGATACTAGTGGAGGATTGAAGGAGCCGAGTTTAGTGATTCGAATCGACAGCAAGACGGCGATGCAGATCAAGAGGCTGAAATGGAAGTTCAGAGGGAATCATACAATTATGGTGGACGGAATTCCGGTGCAGGTCATGTGGGATGTTCATAATTGGCTCTTTGGAAGCTCCGCCATGAGTAGTGCTGTGTTCATGTTTCAAACGCATAAGAGCAGTGGAAGCCATAGCCAATCCAGTTTTGATTCTTCTTCTTCTTCTTCTACTACTTCTTCTTCTTACTGTCAACAGAGTAAAGATTCGAAGTTGCAGGGTTTGGATTTCTCCTTGATGTTATATGCTTGGAGAAATGAATGA Coding sequence (CDS) ATGAAGGATTTTCCTTCTTGTTTCGGCGAAAATGGCGTCCAAATTGCAGATTCTTCGTCTTCTTCTTCTTCGTCGTCTTCGAGTATCAGTAAAGCCGCTCAAAACCTAGTCACCTGCGTCTACCAGTGTAAGTTACGCGGCCGATTGAGCTTCATCGTTCTAACATGGACCAAGCATTTGATGGGACAAGGTCTCTCGCTTCAAATCGAAAACTCTGCTAATCAATACCTCTGTAAGGTAGAAATTAAGCCGTGGCTGTTCTCCAAAAAGAGAGGATCGAAGATCGTCGACGTTGATTTCAATAAAATGGAGATATACTGGGATTTAGCAAACGCCAAATTCGGCTGCGGACCGGAGCCGGAGGAAGGATTCTTCGTTGCTGTGGTATTCGATCGAGAGCTCGTATTCCTCGTCGGTGATTTACCGACGGAAGCTTCCAAGAAGATCACCGGCGTCTCCACTACCACGGCCACGGCGGCGGTGTTTGTGGCGAGGAGAGAGCACGTGTTCGGGAAGAAATCGTACTACGCGAAGGCTCAATTCAGCGAGAAAGGAGAAACGCACAATCTGTGGATCGAATGCGATACTAGTGGAGGATTGAAGGAGCCGAGTTTAGTGATTCGAATCGACAGCAAGACGGCGATGCAGATCAAGAGGCTGAAATGGAAGTTCAGAGGGAATCATACAATTATGGTGGACGGAATTCCGGTGCAGGTCATGTGGGATGTTCATAATTGGCTCTTTGGAAGCTCCGCCATGAGTAGTGCTGTGTTCATGTTTCAAACGCATAAGAGCAGTGGAAGCCATAGCCAATCCAGTTTTGATTCTTCTTCTTCTTCTTCTACTACTTCTTCTTCTTACTGTCAACAGAGTAAAGATTCGAAGTTGCAGGGTTTGGATTTCTCCTTGATGTTATATGCTTGGAGAAATGAATGA Protein sequence MKDFPSCFGENGVQIADSSSSSSSSSSSISKAAQNLVTCVYQCKLRGRLSFIVLTWTKHLMGQGLSLQIENSANQYLCKVEIKPWLFSKKRGSKIVDVDFNKMEIYWDLANAKFGCGPEPEEGFFVAVVFDRELVFLVGDLPTEASKKITGVSTTTATAAVFVARREHVFGKKSYYAKAQFSEKGETHNLWIECDTSGGLKEPSLVIRIDSKTAMQIKRLKWKFRGNHTIMVDGIPVQVMWDVHNWLFGSSAMSSAVFMFQTHKSSGSHSQSSFDSSSSSSTTSSSYCQQSKDSKLQGLDFSLMLYAWRNE
Homology
BLAST of CmaCh08G003420 vs. TAIR 10
Match: AT5G28150.1 (Plant protein of unknown function (DUF868) ) HSP 1 Score: 314.7 bits (805), Expect = 8.3e-86 Identity = 161/311 (51.77%), Postives = 224/311 (72.03%), Query Frame = 0 Query: 1 MKDFPSCFGENGVQIADSSSSSSSSSSSISKAAQNLVTCVYQCKLRGRLSFIVLTWTKHL 60 MKDFPSCFGENGVQ+ADSSSSS+S K AQNLVTC+YQC++RGR I +TWTK+L Sbjct: 1 MKDFPSCFGENGVQVADSSSSSNS-----GKNAQNLVTCIYQCRIRGRNCLITVTWTKNL 60
Query: 61 MGQGLSLQIENSANQYLCKVEIKPWLFSKKRGSKIVDVDFNKMEIYWDLANAKFGCGPEP 120 MGQ +++ +++S NQ LCKVEIKPWLF+K++GSK ++ ++++WDL++AKFG GPE Sbjct: 61 MGQSVTVGVDDSCNQSLCKVEIKPWLFTKRKGSKSLEAYSCNIDVFWDLSSAKFGSGPEA 120
Query: 121 EEGFFVAVVFDRELVFLVGDLPTEASKKITGVSTTTATAAVFVARREHVFGKKSYYAKAQ 180 GF+V VV D+E+V L+GD+ EA KK ++ ++ AVF+A++EHVFGK+ + KAQ Sbjct: 121 LGGFYVGVVVDKEMVLLLGDMKKEAFKKTN--ASPSSLGAVFIAKKEHVFGKRVFATKAQ 180
Query: 181 FSEKGETHNLWIECDTSGGLKEPSLVIRIDSKTAMQIKRLKWKFRGNHTIMVDGIPVQVM 240 G+ H+L IECDT+ + +P LV+R+D KT +Q+KRLKWKFRGN TI+V+ + V+V+ Sbjct: 181 LFADGKFHDLLIECDTN--VTDPCLVVRVDGKTLLQVKRLKWKFRGNDTIVVNKMTVEVL 240
Query: 241 WDVHNWLFGSSAMSSAVFMFQTHKSSGSHSQSSFDSSSSSSTTSSSYCQQSKDSKLQGLD 300 WDVH+WLFG +AVFMF+T +S ++ S S +TT +SK Sbjct: 241 WDVHSWLFGLPTTGNAVFMFRTCQS----TEKSLSFSQDVTTT---------NSKSHSFG 289
Query: 301 FSLMLYAWRNE 312 FSL+LYAW++E Sbjct: 301 FSLILYAWKSE 289
BLAST of CmaCh08G003420 vs. TAIR 10
Match: AT3G04860.1 (Plant protein of unknown function (DUF868) ) HSP 1 Score: 312.4 bits (799), Expect = 4.1e-85 Identity = 160/312 (51.28%), Postives = 222/312 (71.15%), Query Frame = 0 Query: 1 MKDFPSCFGENGVQIADSSSSSSSSSSSISKAAQNLVTCVYQCKLRGRLSFIVLTWTKHL 60 M+DFPSC GENGVQIADSSSSSS+ + AQNLV C+Y+C++RGR I +TWTK+L Sbjct: 1 MRDFPSCSGENGVQIADSSSSSSA-----GRNAQNLVICIYRCRIRGRTCLITVTWTKNL 60
Query: 61 MGQGLSLQIENSANQYLCKVEIKPWLFSKKRGSKIVDVDFNKMEIYWDLANAKFGCGPEP 120 MGQ +++ +++S N+ LCKVEIKPWLF+K++GSK ++ ++++WDL++AKFG PEP Sbjct: 61 MGQCVTVGVDDSCNRSLCKVEIKPWLFTKRKGSKTLEAYACNIDVFWDLSSAKFGSSPEP 120
Query: 121 EEGFFVAVVFDRELVFLVGDLPTEASKKITGVSTTTATAAVFVARREHVFGKKSYYAKAQ 180 GF+V VV D+E+V L+GD+ EA KK T + +++ AVF+A++EHVFGK+++ KAQ Sbjct: 121 LGGFYVGVVVDKEMVLLLGDMKKEAFKK-TNAAPSSSLGAVFIAKKEHVFGKRTFATKAQ 180
Query: 181 FSEKGETHNLWIECDTSGGLKEPSLVIRIDSKTAMQIKRLKWKFRGNHTIMVDGIPVQVM 240 FS G+TH+L IECDTS L +P L++R+D K MQ++RL WKFRGN TI+V+ I V+V+ Sbjct: 181 FSGDGKTHDLVIECDTS--LSDPCLIVRVDGKILMQVQRLHWKFRGNDTIIVNRISVEVL 240
Query: 241 WDVHNWLFG-SSAMSSAVFMFQTHKSSGSHSQSSFDSSSSSSTTSSSYCQQSKDSKLQGL 300 WDVH+W FG S+ +AVFMF+T S + S+ Q SK Q Sbjct: 241 WDVHSWFFGLPSSPGNAVFMFRT---------------CQSVEKTWSFTQVPTSSKSQSF 289
Query: 301 DFSLMLYAWRNE 312 FSL+LYAW+NE Sbjct: 301 GFSLILYAWKNE 289
BLAST of CmaCh08G003420 vs. TAIR 10
Match: AT2G04220.1 (Plant protein of unknown function (DUF868) ) HSP 1 Score: 194.5 bits (493), Expect = 1.3e-49 Identity = 111/286 (38.81%), Postives = 163/286 (56.99%), Query Frame = 0 Query: 31 KAAQNLVTCVYQCKLRGRLSFIVLTWTKHLMGQGLSLQIENSAN--QYLCKVEIKPWLFS 90 K AQ+ VTC+YQ + G + + W+K+LM L + + N Y CKV++KPW F Sbjct: 25 KTAQSTVTCIYQAHISGFWRNVTVLWSKNLMNHSLMVMVTNVEGDMNYCCKVDLKPWHFW 84
Query: 91 KKRGSKIVDVDFNKMEIYWDLANAKFGCGPEPEEGFFVAVVFDRELVFLVGDLPTEASKK 150 K+G K DV+ N +E+YWD +AKF PEP F+VA+V + E+V LVGD +A K+ Sbjct: 85 NKKGYKSFDVEGNPVEVYWDFRSAKFTSSPEPSSDFYVALVSEEEVVLLVGDYKKKAFKR 144
Query: 151 ITGVSTTTATAAVFVARREHVFGKKSYYAKAQFSEKGETHNLWIECDTSGGLKEPSLVIR 210 T AA+F ++E+VFGKK + +A+F ++ + H + +E TSG KEP + I Sbjct: 145 -TKSRPALVEAALFY-KKENVFGKKCFTTRAKFYDRKKEHEIIVESSTSGP-KEPEMWIS 204
Query: 211 IDSKTAMQIKRLKWKFRGNHTIMVDGIPVQVMWDVHNWLFGSSAMSSAVFMFQ---THKS 270 ID +Q+K L+WKFRGN T++VD PVQV WDV++WLF +F+F+ T S Sbjct: 205 IDGIVLIQVKNLQWKFRGNQTVLVDKQPVQVFWDVYDWLFSMPGTGHGLFIFKPGTTEDS 264
Query: 271 SGSHSQSSFDSSSSSSTTSSSYCQQSKDSKLQGLDFSLMLYAWRNE 312 S S T++ S +K S +F L L+A++ E Sbjct: 265 DMEGSGHGGGGGGESDTSTGSRYYSTKSSNPWPPEFCLFLHAYKLE 307
BLAST of CmaCh08G003420 vs. TAIR 10
Match: AT4G12690.1 (Plant protein of unknown function (DUF868) ) HSP 1 Score: 193.0 bits (489), Expect = 3.7e-49 Identity = 108/299 (36.12%), Postives = 176/299 (58.86%), Query Frame = 0 Query: 16 ADSSSSSSSSSSSIS-KAAQNLVTCVYQCKLRGRLSFIVLTWTKHLMGQGLSLQIENSAN 75 ++SS++ + ++ K AQ+ VTC+YQ + G + + W+K+LM L++ + + Sbjct: 5 SESSTAEKITEDPVTYKTAQSSVTCIYQAHMVGFWRNVRVLWSKNLMNHSLTVMVTSVQG 64
Query: 76 --QYLCKVEIKPWLFSKKRGSKIVDVDFNKMEIYWDLANAKFGCGPEPEEGFFVAVVFDR 135 Y CKV++KPW F K+G K +V+ N++++YWD +AKF GPEP F+VA+V + Sbjct: 65 DMNYCCKVDLKPWHFWYKKGYKSFEVEGNQVDVYWDFRSAKFNGGPEPSSDFYVALVSEE 124
Query: 136 ELVFLVGDLPTEASKKITGVSTTTATAAVFVARREHVFGKKSYYAKAQFSEKGETHNLWI 195 E+V L+GD +A K+ T + AA+F ++E+VFGKK + +A+F ++ H + + Sbjct: 125 EVVLLLGDHKKKAFKR-TKSRPSLVDAALFY-KKENVFGKKIFSTRAKFHDRKREHEIVV 184
Query: 196 ECDTSGGLKEPSLVIRIDSKTAMQIKRLKWKFRGNHTIMVDGIPVQVMWDVHNWLFGSSA 255 E T G KEP + I +D +Q++ L+WKFRGN T++VD PVQV WDV++WLF + Sbjct: 185 ESST--GAKEPEMWISVDGIVLVQVRNLQWKFRGNQTVLVDKEPVQVFWDVYDWLFSTPG 244
Query: 256 MSSAVFMFQTHKSSGSHSQSSFDSSSSSSTTSSSYCQQSKDSKLQGLDFSLMLYAWRNE 312 +F+F+ S + + S+SSS++SS +C L LYAW+ E Sbjct: 245 TGHGLFIFKPESGESETSNETKNCSASSSSSSSEFC--------------LFLYAWKLE 285
BLAST of CmaCh08G003420 vs. TAIR 10
Match: AT4G12690.2 (Plant protein of unknown function (DUF868) ) HSP 1 Score: 193.0 bits (489), Expect = 3.7e-49 Identity = 108/299 (36.12%), Postives = 176/299 (58.86%), Query Frame = 0 Query: 16 ADSSSSSSSSSSSIS-KAAQNLVTCVYQCKLRGRLSFIVLTWTKHLMGQGLSLQIENSAN 75 ++SS++ + ++ K AQ+ VTC+YQ + G + + W+K+LM L++ + + Sbjct: 5 SESSTAEKITEDPVTYKTAQSSVTCIYQAHMVGFWRNVRVLWSKNLMNHSLTVMVTSVQG 64
Query: 76 --QYLCKVEIKPWLFSKKRGSKIVDVDFNKMEIYWDLANAKFGCGPEPEEGFFVAVVFDR 135 Y CKV++KPW F K+G K +V+ N++++YWD +AKF GPEP F+VA+V + Sbjct: 65 DMNYCCKVDLKPWHFWYKKGYKSFEVEGNQVDVYWDFRSAKFNGGPEPSSDFYVALVSEE 124
Query: 136 ELVFLVGDLPTEASKKITGVSTTTATAAVFVARREHVFGKKSYYAKAQFSEKGETHNLWI 195 E+V L+GD +A K+ T + AA+F ++E+VFGKK + +A+F ++ H + + Sbjct: 125 EVVLLLGDHKKKAFKR-TKSRPSLVDAALFY-KKENVFGKKIFSTRAKFHDRKREHEIVV 184
Query: 196 ECDTSGGLKEPSLVIRIDSKTAMQIKRLKWKFRGNHTIMVDGIPVQVMWDVHNWLFGSSA 255 E T G KEP + I +D +Q++ L+WKFRGN T++VD PVQV WDV++WLF + Sbjct: 185 ESST--GAKEPEMWISVDGIVLVQVRNLQWKFRGNQTVLVDKEPVQVFWDVYDWLFSTPG 244
Query: 256 MSSAVFMFQTHKSSGSHSQSSFDSSSSSSTTSSSYCQQSKDSKLQGLDFSLMLYAWRNE 312 +F+F+ S + + S+SSS++SS +C L LYAW+ E Sbjct: 245 TGHGLFIFKPESGESETSNETKNCSASSSSSSSEFC--------------LFLYAWKLE 285
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR008586 | Protein of unknown function DUF868, plant | PFAM | PF05910 | DUF868 | coord: 33..309 e-value: 6.2E-99 score: 331.1 |
IPR008586 | Protein of unknown function DUF868, plant | PANTHER | PTHR31972 | EXPRESSED PROTEIN | coord: 1..310 |
None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 268..293 |
None | No IPR available | PANTHER | PTHR31972:SF67 | PLANT/T24G3-80 PROTEIN | coord: 1..310 |
Relationships
The following mRNA feature(s) are a part of this gene:
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