CmaCh08G002550 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G002550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	WD_REPEATS_REGION domain-containing protein
Location	Cma_Chr08: 1446679 .. 1459333 (-)
RNA-Seq Expression	CmaCh08G002550
Synteny	CmaCh08G002550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAACCAAGTCTTTGCCACGGCGTACGGTTGCTCTTCAGAGCTGAAGCCAGTGCCGGACTTCTGAAGATCCCTCCATCGTTCCTATAAAATCCACCGCCGGCGAGTACCACAAGAATCAGACAACAAATTGAAGTCGAGAGCTGCGTTTAGCTAGCATTGTTCATGAGATTTGAATCTCAATATTCGTTTTCCTGTTGAATTGAAGTAGGTTCCGGTGCTGCTGAACTAAAGAAAGGGAAGAAAAATGTTGAGGCTAAGAGCATTCCGGCCTTCAAACGAGAAGATCGTGAAGATACAGATGCATCCGACCCATCCATGGCTTGTAACCGCCGATGCGTCGGATCACGTTTCTGTATGGAATTGGGAGCATCGGCAGGTCATTTACGAGCTCAAAGCAGGCGGAATTGATCAGAGGCGTCTTGTTGGTGCCAAGTTGGAGAAGCTCGCTGAGGGCGAATTCGGTTCGATCCGTCGAGATTCCTTTTTTTTCTTTAATTGTTATGTTTTGAACAATTTTCTGAATCGTAACCTGAAAATTTTCTGCTGATTTGTGTCTCGTGAACGTGATTGTTAGATTCGAAGGGGAAGCCGACTGAAGCTATACGAGGGGGAAGGTGTGAGTCTGGCATTTCCTCGTTTTCTTTTGTTTGCATCGGTTTGAAAACTAACTCATGGGGTGCACTGTTTGATGCAGTGTGAAGCAGGTAAGTTTTTATGACGACGACGTTCGATTTTGGCAACTGTGGCGGAACCGTTCCGTAGCTGCTGAAGCTCCTTCAGCTGTCAATCAAGTTACATCAGCTTTGAGTTCCCCTGCCCCTTCCACAAAAGGGAGGCATTTTCTAGTTATCTGTTGTGAAAATAAAGCCATATTCTTGGACTTGGTGACAATGCGAGGCCGTGATGTACCGAAGCAGGATCTTGACAATAAATCTCTTCTCTGGTAAGTTTTCACTCTGTTTAATACCCTGATAGTGTGTTTATGGATTAATTTTGTGTTTTTGACTGGAAGTAATCTCGAATATAGTTTTGGAATCCAGGATTTCTTTGTCCCATTTACATTTTGTGATTCCTTGATAGTGTACTGTCTTCAAATGAATCTCAAAGAATGTTTGAACTGAAAGTAGTACTTCAACAAAATAATTCGATATACCTCAATTGGTGTCTGTGGATTGAGTTTGTGAGATCTCACATTGGTTGGAGAGGAGAACGAAACATTGCTTATAAAGGTGTGGAAACCTCTCCTTAGCAGACACGTTTTAAAATCGTGTGGCTGACAACTATACTAATGGGTCAAGGTGGACAATATCTATTAGCAGTGGGCTTGGGCTGTTATAAATGGTATCAGAGCCAGACACTGGGTAGTGTGCCAGCGAATACGCTGGACCCTAAGGAGGTGGATTATGAGATTCCACATCGGTTGGAGAGGGGAGCGAAACATTACTTATAAGGTTGACTGTGATACCTGCTAGCGGTGGACTTGGGCTATTACAGGGTTTGACCTTTGTCTTTATTCAGGTTTTATATTATGGACTACAGTTTCAAAGGAGTAACCATAAAGGAATTTGGTTACCAAAAATCTGTACTGCATCGAAGTGAACATTTTAAAAGGCTCTGCCAAGGAAATGAATCATATTTTTTCGAATTTTCAATGCATTGTCTCTTTTACATTAAATGAAGTCAGTAAAAAGTAATTTATATGTTTTCTATTTTGTCTTCTTCGATCCCATGTTTCTAATCCTTGGATTGTGTTCTTCAACAAGCATCTTGTTTCTCATACAAATGTAGAGAAATTAAGTCTGTTACAGTTTCAAAGGAGTAACCATAAAGGAATTTGGTTACCAAAAATCTGTACTGCATCGAAGTGAACATTTTAAAAGGCTCTGCCAAGGAAATGAATCATATTTTTTCGAATTTTCAATGCATTGTCTCTTTTACATTAAATGAAGTCAGTAAAAAGTAATTTATATGTTTTCTATTTTGTCTTCTTCGATCCCATGTTTCTAATCCTTGGATTGTGTTCTTCAACAAGCATCTTGTTTCTCATACAAATGTAGAGAAATTAAGTCTGTTACAGTATCTAAGCCTTCTTTTCCTGTCCTCCTGAAATTAACAATGAACGATTAAACTTAAAAAAAACTGACAATTTGTTTCCCATTTTTTAGAAGCTGTCTTGTTAATGGACTTGATCCTTGTTGATGCTCCATCCTTTTAAGCCTTTTGAAAAGTAGATTTTTAGGGCATTTTTGTAATCTATTAATACTAATGCACCTACTTTGTCTTGGCTTTTCTTTTGGCTAATGCCCTTAGTCAGTGTTTTCCTAGAATCTCTAACCTCTTGGTCAAGAACACATGCTTCATGTTAGTTGAGATATGCTCATGTTGGCAAATGCTGTTGCGTGAATTATTTGCGCTTGACACAATCATTAACCTTGTTGCATTCTTTATTTTGTTGTTTAACTTGTTTATTTATTAGGGACTTTATGTTTTTATTATCATAAGATGACACATTACTGTTGGATTACATTGTTCCTCTCCTATGATAATAACATAGTAACTGCACTGTCAATAATTTTCTTATTCGTCCTAATGCATGCATTGGGCAAAAGAACATGTCTGTCTCAATATAGACTACATTTTACTTCACGTTTTCTTTCTAACATTCAAATGCTTGAATTTCAAAATTTATGAAAATTTCCATTTTCTTTTTACAATCCAAATCTTTCAAAGTTGATATTTTCAATTAAAGCCTCAATTTCTGTATACCAACATGAGAAATGTAGGAAAATGTGTTATTTAAGCTGCTATCAGAATCTTTTTGTTTGTGGTTAGTGGTTTTGGATCACTAAACTGTTCGTCTTTTTTCCATGTTGCAGCATGGAGTTCCTCTCTAAATCTTCAGGAGCAGATGGTCCTCTTGTGGCCTTTGGTGGATCAGATGGTGTTATTAGGGTCCTCTCAATGCTAACCTGGAAGGTATGGGATATTTACTTATTGGCCAAGTTTGATAGCATTATCAAACTGTTAATTCTTATTTTATCATTTCATATTTTTTTGCAGCTAGTGCGTAGATATACTGGAGGTCATAAAGGATCAATCTCATGTTTGATGACCTTCATAGCTTCCTCGGGTGAGGTAACTCCATAAAATGTTATCTAGCTGTAATGTATGATGGTACATCGATTCTGTTCAATTAATTTGATAGGAAACTTCTCATTTTTATCTAATGAGGTCATTTATTCATTAATTATTGGTTTACTCTACAACTTTTTTGACTTTGTCAATATTGAGAGAGCATGTAAAGTTTGAGGGACCGATGTTTGAATTATAAATATGCGTTTCAATAAGTTGCCCTTTTGAGTTAGCTCTCTTATGTACCCGCTATCTGTCTTCATGTCATATTCTTTTCCTTATCAATGCTTTCCCTGCTTTCCTTCTGGATCTTTTACCGTTTTGTATTTGTAAATTTGATTGCCAGGCACTTCTGGTTTCTGGTGCTAGTGATGGCTTGCTTGTACTCTGGAGTGCGGACAACAGCCAAGATTCACGAGAACTTGTACCAAAACTAAGCTTAAAAGTGCGCCCTCTACCTTCAATTTCTATAACTACTTTGTTAGTAGGTTTGTTAGTTATTATGTTTAAATATTTTATGCTTTTGACTTCTTCAAAAAACTTTCTCTTGCAGTCCAATTTTCTCCATTATTTACCTCTAACTGGTTATTTCTTTGAAATTGAATACTTGATGACTAATGTATTCACATATCCTTTTCATGATCAAATATATTTGTTGTGTGTTCCTCAAAGATTAATGAACTGGGATGATGATAAAATAGATCGTTTGCATTCTTGATAGGCGCATGATGGTGGGGTAGTAGCTGTCGAACTGTCCAGAGTGATTGGAGGTTCTCCACAACTTATCACGATTGGTGCAGACAAAACACTTGCTCTTTGGGACACTATCTCTTTTAAGGTATCGTTGCATATCAATAGTTCATTACATTTTACAATACTGAAGCATTTAGCAGATATTTATTACCTTATCTACTTCCAAGTTCTCTTGAATATTTTATGTTATCCTATTTAATCTATTCTTCTCAGGAATTGCGTCGCATCAAACCTGTTCCAAAATTGGCCTGCCACAGTGTTGCATCTTGGTGTCATCCTCGAGCTCCCAACCTTGATATTCTCACTTGTGTTAAAGATTCCCACATATGGTGTGATTTTTATTTTCTTGTTATTTTTTCGTTTGATTAATGAGTTATGTTAGATAAGAATGTTGAGCATTCTTGTGTTCATTTTGTGAAATAAAGAGCAGTGAGCTTGTGTCAGCTTCCATATATCTCTAGGTTATATTAAATTTCATTTGTGATTTTTCAGTTTTCTTATTGCATCAAGGGTCTTATAGGTTAATGCCTTCACTTTTTCAGGGCTATTGAGCACCCCACGTACTCAGCTCTCACAAGACCTCTTTGTGAACTTTCTTCCCTTGTCCCTCCTCAAGTGCTTGCTCCAAACAAGAAAGTTAGGGTACGTCTTTTACCACAAGCATGAATCTTGTAAATATTCCTAATAAGTTTGTTTTGTCTTGGTTTCGCCTAGATTTTTGTTGTTTTGTTGGGGGTTTCTTCCTAGCCCCATGGTGTTCTTGCATCTTCTTCTTTCTTCTATTCTTCCCAAGAGAATTCTTTTTGCTTCCTCTTAGCGAAATCAAATAACATGAATTATCAAACAGCTACCCTATCTCATGTTGCTGGCTTATTGTATGATTGCTCATCGGTCTCATGTTGCAGGTTTACTGTATGATTGCTCATCCTTTACAACCTCATCTTGTTGCTACTGGAACCAATATTGGTGTTATCATCAGTGAACTTGATGCTAGATCTCTTCCAGCAGTAGCTCCTCTTCCAACTCCATCAGGCAGCCAAGAGCATGCTGCTGTTTATATCGTTGAAAGGGAACTAAAGTTGCTAAATTTTCAATTGTCACACACAACCAATCCATCCTTGGGAAACAATGGATCCTTATCTGAAGGAGGAAGGTTAAAGGGAGATGAGGTGCTACAAGTAAAGCAGGTCAAAAAGCACATCAGTACTCCTGTTCCACACGATGCATATTCGGTTCTTTCTGTTAGCAGTTCCGGAAAGTAAGTTTGCCCCCTATTCCTCTTGTTTGAACCTTTTTGTGTAAAATGAATTGTATATTTGGTTGTGCATCCATAATCATAGAAGATGGATTAGCAGATTTTTCCCCTTTTTTCCTTTTAACAAAACTAGTCATTGATGAAATGAAAAAAGATAAATAATCAAAAGATAAAAACTCTACAAGCGAGTGAAAGCGAAAACTAAAATTATAAAGATAATAAATGTCTCGAGTAATAATTACAAAAAAAAACTATTATTTTCAGTGTCTCGAGTAATAAGCAACCAATACGTGGGTGTATTTTTTTTTTTTTTTTTGTTTATCCTGTATATATGTAGTAAATGTCTATTTTATTGGCCGGGAATTTATTGCTCTCTGACTTGACAGTTTTGCTGTCTTTCTGTAACTTGCTATTCTTTGCCACCATTGATTTCTAGTAGATTAAATCAAGAATCTGGTTAGAAGTTGTAGTTTCATTGGAAAGTCACAATCATTTTGATGCAGGTACCTTGCTATAATTTGGCCTGATATTCCCTACTTTTCCATCTACAAAGTAAGTGACTGGTCCATTGTTGATTCTGGAAGTGCGAGGCTTTTGGCCTGGGATACATGTCGAGACAGGTTTGCTTTGCTTGAATCTGCTGTACCTCCTAGATTTCCTGTAATTCCTAAGGGCGGATCATCACGGAAAGCAAAGGAGGCTGCTGCAGCAGCAGCACAAGCAGCGGCTGCAGCTGCTTCTGCTGCTTCCTCGGCCAGTGTTCAAGTTCGTATATTGCTCGATGATGGAACGTCAAACATATTAATGAGGTCTATTGGTAGCCGCAACGAACCGGTATTTCAAGTCTATCTGTTCTCTTTTGTCTTCCCTTTTCCTTTTCTTCATTACGCATTAGAAGGTTAAGTAAGCTAAAACTTGTTACTTGTTACTTGCAAATTCCAATTGCCAAATTCCATTTCCAATTCCAATTTCCATGAAAATTTTACCAATTTCAAAACTTACTTGAGATTTGATCATCCTCCCCTTCTTCTTCCTCCATATTCACGGAAGCGCAATGAACAGTCAAAATTCCACCAGCCACCAAAATCACATAATTTACTCGAAACTCACACACACTGTTGGCGAAACACAAAGGTACAACGCAGCGCCACAATTGCAAAAAGTGTATCTTCACTGCACCAGCGACTGACAACACTTCACTTTCGATTTAGGATCCGACATGTTCAAGCTCTGATTTGATTACTTTAGGAAGCGAAAAGAGGGGGAGAATACAAAAAAAAAACTGCCAGGGTTTACATTGTATATAGAATTGCATAATTAGATACAAACCTAAGAGGTCTATTTATGCTAATGAGAGCAATATGCAAAGACTAATCTACCATTACGAAATGAATCCAAATCAAATAAAACCTAACCTAATCTAACAATCATCATTATATACTAAAGAAATACAAAATGTTGGTGAGAAATTTCCACAATTAGAATTCCCAAGGGGGATTACAAAAATACCCTCTCATTGGCTTTGGTCATAGAAATATTCTTGAAACAAGAATAATAAAGCATATGGGGCTCTCTAATCTTAATTGTCTAATATCTAGCTATTTCTTATAGAATTGTCTGATAATCAGAGGTCTGCATTTCTTTTTACAGTTATTGGATATTCTACTGCTTTCATCCCTTGCCATGTCAAACTAAAATGAGCTCTGCTAGTCGTTGCATTTTTCATATTTGTTGTCTCATTTACTTTACATCATTATTCAGTATGAGGAGAAAATAATTTAGCTAAAATAAAATTTTTAGGTTGTGGGTTTGCATGGTGGGGCTCTACTTGGCGTTGCATATCGAACATCCAGGAGAATTAGTCCTGTTGCTGCAACAGCAATTTCAACAATGCCTTTATCAGGATTCGGTAACAGTGGTGTTTCTTCCTTTACAAGTTTCGACGATGGTTTTTCTTCCCATAAATCTTCGGCTGAAACAACTCCACCAAACTTTCAATTGTATAGGTTTGTGTAACTTTGATTTTATTTATTTTGCACGGCTCATTTATTTATTTCTTTCTTTTCTTCTTTTTGTTCTAGATAAGAAATGGAACTTATTCCAATCAAAAAGAGGAATACTCACCCAAAAAGTCAACGGACACTAGAAAAGGCTCTGATTGGCATGAATCGCAAATAAATTATAGTTACAACAATCTATATTATTTCCCATTATTTGGTGCCAAAGACTTGAGTTATTTTAGAACAAACATTTAGTGAAATCATGTTTGGTTAGTTTTCCTTTTTGGAAGTCTCAAATAGTTCTTTTCTTACGGATTATTTATCCTGGACTTCTAAAGGGCGAGTTTATACCTTTACAAGTCACCACCTTTATACTTCTAAATACAAGTTTTTCATACTTTTCTTTTTTATTCACTCTGGATGGTGTATATCATGCAGCTGGGAAACTTTTCAGCCTGTCGGTGCGCTTCTTCCCCAGCCAGAGTGGACTGCATGGGATCAAACTGTTGAATACTGTGCCTTAGCATATCAGCATTACATTGTCATATCTTCTCTGCGTCCTCAGTATAGGTACTTGGGTGATGTAGCAATTCCATATGCTACTGGAGCTGTCTGGCACCGTAGACAACTATTTGTGGCTACTCCAACTACTATAGAGTAAGCTACATTTCCCCCTTGCTTGCGTAATTTCTTGTTTGATTCCTGGCTTAATGTTCATCATATTTCTCATGAATTTGTTTTCTTCCCAATAAATTGCAAGAGTTGTAAGGCAGGCCCCGTTAATGGAAAAAAACAAACTATTATTAGAAGCACTCCCTTTCCTCTATACTCCGAAAATTGGAAATGAAGAGGCATCTTTTCTGGGAATTGAAAAGACACTGCATAACCTTTCCCCTTCCAAAGCTCTTGCTGCCTCACTGTTCAGGCTCCTGAACGCCATAGATGCGTCGACAGGCCTCCTTCTGTCACTGTTCTCCATCAGTTTCGTCTGCTGCATATCGGCTGTGTCCCTTCCACTTCTTGCACCCCTTAGTTCTATTTTGCCTTTGTTTTCTTTTATCCTTAGCCACCCCTCCTCGCTGTTAGCTTTGTCTGGTGCCGCCTGACCGTACTCTCTTTCGGTTTTCTTCTTTAAACCCTAGCTTCCGCTTTTTCCCCTTGATTCCCTCTGTTTTTTTTCTGTTGTCTTCAACTGCTGCTTCCCGTCTCTTTCTTATATTATTCATTTGTTTCTTTCCTCTCGTCACCTAGTCCATCCTTTTCCCTCCATCCCCTTACGTTGTGTCACTAGCTGCAACAGCTACCACCTAGCCATTTCCAAGGAGGTGATGAGTTGTTGTATCTGTAATCATTATTCACATTTGATATGAAAATGACATGGGGTTTGTTGATTCGTTGAAGATCTCCTGCTAAAACTCTTTCATGTTCCGAGGGGATGTCAGCCCATACACCCCCATTATCCACCAGTAAGATTGTTGCTGAAGAGATAGCAAATGGAGATGGAAAAGACCTCTGAATAGATTCAAAGACAGTTATTTTCCTCTTTCCACATCAACAATATTCCTCTGGAGGAACCAACCAATGTACTTCGCTCTCCAAACTGATTTGATCATCCTCCTATCCATCTTGCTCAACTTTCTCTTGAAGGATAACTACATCTGGGCTAAACATTACTAATTATGTAACATATGGTTCATATGGGCTTCTCAAATTTTAAGTATTCTTCTTCTACCATTTTGATCAATCTTGTTCATTGTTATGTGTGTTTCCATTGAGAGAACTGGGAAAAATTTCTACCATCTCTATTGTTTCTGGTGAGGCTTAGTGGAGAAAGGGGAGATTGAGTATTCTGGAGCGAAGAGAGTACTCAGTCTTTTTTTCTTTGCTCATTCAAATAACTTTTCTCATTTGTCTGTCTTTGTCATTTAATGTAATTCATATTCTTTGATATCTTATAAATTATTTGAAGTTCTAGATATCTGATCGTTATGATAGAAATTTGAGTTTTATAAATTTTAAGTAAATACTACTAGAAGTCTAGAACTCAGGTACTTAAGTTCTGCTGCTTGATTTAGATGCGTTTTTGTGGATGCTGGAGTTGCACCTATTGACATTGAAACGAAAAGGATGAAAGACGAGATGAAGTTGAAAGAAGCACAAGCTAAAGCCATTGCTGAGCATGGGGACTTAGCTCTTATTACTGTAGATGGCCCTCAAACTGTTAACCAAGAAAGGATAACGTTGAGGCCCCCAATGCTTCAGGTCAAATATCCTTCCCTTTCTTTGTACGTGACTATCCGTGGTCACAATATTAGCCATGTTGTTTGATTTTGGGTCCACACAATGTGAATCTTGATTTGATCATGCATATCCTTGACAATATGGGAAGACCTTTCCTACTGACTTCAGAATACATGCAGGTTCTGATCGGGAAAGTCTCTTCCAGTGTGAAATTTAACAATTTAAAATTTTCTTATAGTTCTGATAAAAACCTCTTCAAAACTATAGAAAATACTGATGACATTTGGTTTACCATTTGGAAACTAGTTCTTAAAACCAAGGGGAACAAAAAAATATCATTATTTTTTGAAACCTTTTGCTGAACCCTTTGCTCAAAATAGTGTTTCTACAACTTAATTTTGGTATATAGCAGTATATGGTTCTTGAATCGTATGAATTTCTTTCTTATCTTTTAATATTAATTTTACCTTAAAATTTCAGGTGGTGCGACTAGCATCATTTCAGCAAGCTCCTTCTGTGCCACCATTTTTATCATTACCCAAACAGTCGAAAGTGGATTCAGATGACTCAATGATGCAAAAAGAGTTTGAAGAAAGAAGAGCTAACGAGATAGCAGTTGGCGGTGGTGGAGTGTCAGTGGCTGTTACTCGTTTCCCAGCTGAGCAGAAACGCCCTGTAGGACCTCTAGTTGTGGTTGGTGTTCGAGATGGTGTTCTCTGGTTGATTGACAGGTACTTGAATCTTGTAGTTTATTGCAATGTAAAGGACATAACTACACTTCCTCCCAAAAGAAAGAACAAGTGTTGAAGTTTTTCAGCTCAAATTTTCAACCCGGTTCTCTGTCGGTTCGTGTATTTTCATTGTGTTAGACCATCCCAGAATTATTGGTGAAAGTTCACTAAATCTTTCATCCAACGATGTGCTTGTGGAGTATTTACAAAATTACACTACCGTTCTTAGAGTTTATACCATCACTTATCAACCCCTTTCACATTTCCAATGTCATTATCTCTTATGCTTGGAAGGGTTCATGAATTACGCTGCTTGATTTTTCTTGGCCAGGTACATGAGTGCACATGCTTTATCCTTAAATCATCCCGGTATTCGGTGCCGATGTCTTGCTGCCTACGGTGATGCTGTCAGTGCTGTCAAATGGTATTGGCTATTTTCTCATTCTCTTACATGTTGGCAATAGCCAGAATTGTTTCAAGTCCTAAATACTTCTTTTTCCTGCAGGGCAAGTAGGCTTGGTAGAGAACATCATGATGACCTAGCCCAATTTATGCTTGGAATGGGCTATGCCACCGAAGCTTTACATCTGCATGGAATATCTAAAAGGTAAACAAACACTTGCAGGAAAGATGCTACCCTACTGTAGAAATAAAATGCATATGTTTGCTGTTACATCAAGATTTTTTATTAGAAAGCATACAAACATGTACACCCATTTTCGTGGTTTGTTGCCGTTTACGAGCCCCCTTATACAGAGTTCCTCAATCACTCTTTGACTAGTAGCTTGGATTCTATCGCTCGATATGAGGTCACTGTGTTAATCAAAGCCATATTAGTTGCATAACAATCTGATTACTCTAGTCCTAGTTCTAATTGTTGAAAATTTCAGATTGGAATTTGATCTGGCCATGCAAGGAAATGATTTAAAAAGAGCACTTCAGTGTCTTCTTACAATGAGCAACAGCAGGGATATGGGGCAAGATAATACAGGGCTTGATTTGAATGACATTCTCAGCCTAACAACTAAAAAGGAAGATATTGTGGAAACATTTCAAGGAATTACGAAATTTGCTAAAGAGTTTTTGGATTTGATTGATGCTGCTGATGCTACTGGACAAGCCGATATCGCTCGTGAGGCTCTAAAGAGGTTAGCTGCTGCAGGTTCCTTGAAAGGTGCTTTACAGGGTCATGAGTTGAGAGGATTGGCTCTGCGATTAGCGAATCATGGAGAGTTGACACGACTGAGTGTATGTACTTTAAATAATTAGTCTCCAATGGTCCGTTTATGGTAAATGACGATGTAAATGCTACAGGGATTGGTAAACAATTTGATCTCGATCGGCTCGGGACGTGAAGCAGCGTTTGCAGCTGCAGTCTTGGGAGACAATGCTCTCATGGAAAAAGCATGGCAAGACACAGGAATGCTTGCGGAAGCTGTGCTTCATGCTCATGTATGTCATCTTTAGCTGTGTTGTATCTGTACTTTTGATTGTGTATTAACTTACGTGCAATTTCCAGGCTCATGGTCGACCGACATTGAAAAACTTGGTCGAGTCTTGGAACAAAATGCTTCAAAAGGAATTGGCGCACACTGTGTCGGAGAAGACCGATGCCACAGCTGCATTTTTTGCATCCCTCGAGGAACCGAAACTCACAAGCTTGGCAGATGCAGGCAAGAAGCCTGCAATTGAAATCCTTCCTCCTGGAATGCCTACTTTGTCATCTTCCATTTTAGCTCCCAAGAAGCCAACTCCTGGTGCACAAGGAGCATTGCAGCAACCAGCCAAGCCATTGCTTCTGGAAGCACCACCTGCTAATCCGCAACCACCACCAGACGGTACACCGAACCAATCAGAACTAAGCGAACAGGTTTTGGATGGCAAAGCCCCGACGTCAACAACAGGTACCGACACATCTCCGACTACTCCAGCAGAAAATGTTCCTACGACATCAAATGGTTCCGAGCCATCTGATGTACAACTATCATCCTTTAACACGACACTAGTAGAGACTCAAATACCATCGTCCGTAACTAATACAGAACATTCAGAGGCTGTTGTAGAGGCGGCCGAGATTCAGAATTCCTCTGTTCACAATTCATCGTCGACAAATGATGCAGCACTGCCATCGGAGGCCCCATCTGAGATGCCCGAGCTTCAGAATACCTCTCTTCCAAATGTATCACAATTTTGAAATCCAGCCATAGTTTAGTATAGAAAGGGAGGTTGATTTGTTCCCAGCTGTTGTAATGTATCTTCGTGTGTTTGATTGGCAGTTGCATATATCTTTTAGTTTATTATTGCATTAAATTTAGTACACTCATTCCATTATATATGCGGTTTGCATATATTCTTATGTTCATTGTTGCATTATGTTTAGAACACACTCGTTCCATTATGTGTGGTGGCCTTTGATTAGGTTGGTCATCTTCTGTGAAGATGTGAGTTGTATTTTATGTTTTTCATTGTTTTCGAAGATGTTTTTACCTGTCAATGAGTGTTCCAAAAGTGATGCATGTCAATTAATATTTACCTCAAAT

mRNA sequence

AAAAAACCAAGTCTTTGCCACGGCGTACGGTTGCTCTTCAGAGCTGAAGCCAGTGCCGGACTTCTGAAGATCCCTCCATCGTTCCTATAAAATCCACCGCCGGCGAGTACCACAAGAATCAGACAACAAATTGAAGTCGAGAGCTGCGTTTAGCTAGCATTGTTCATGAGATTTGAATCTCAATATTCGTTTTCCTGTTGAATTGAAGTAGGTTCCGGTGCTGCTGAACTAAAGAAAGGGAAGAAAAATGTTGAGGCTAAGAGCATTCCGGCCTTCAAACGAGAAGATCGTGAAGATACAGATGCATCCGACCCATCCATGGCTTGTAACCGCCGATGCGTCGGATCACGTTTCTGTATGGAATTGGGAGCATCGGCAGGTCATTTACGAGCTCAAAGCAGGCGGAATTGATCAGAGGCGTCTTGTTGGTGCCAAGTTGGAGAAGCTCGCTGAGGGCGAATTCGATTCGAAGGGGAAGCCGACTGAAGCTATACGAGGGGGAAGTGTGAAGCAGGTAAGTTTTTATGACGACGACGTTCGATTTTGGCAACTGTGGCGGAACCGTTCCGTAGCTGCTGAAGCTCCTTCAGCTGTCAATCAAGTTACATCAGCTTTGAGTTCCCCTGCCCCTTCCACAAAAGGGAGGCATTTTCTAGTTATCTGTTGTGAAAATAAAGCCATATTCTTGGACTTGGTGACAATGCGAGGCCGTGATGTACCGAAGCAGGATCTTGACAATAAATCTCTTCTCTGCATGGAGTTCCTCTCTAAATCTTCAGGAGCAGATGGTCCTCTTGTGGCCTTTGGTGGATCAGATGGTGTTATTAGGGTCCTCTCAATGCTAACCTGGAAGCTAGTGCGTAGATATACTGGAGGTCATAAAGGATCAATCTCATGTTTGATGACCTTCATAGCTTCCTCGGGTGAGGCACTTCTGGTTTCTGGTGCTAGTGATGGCTTGCTTGTACTCTGGAGTGCGGACAACAGCCAAGATTCACGAGAACTTGTACCAAAACTAAGCTTAAAAGCGCATGATGGTGGGGTAGTAGCTGTCGAACTGTCCAGAGTGATTGGAGGTTCTCCACAACTTATCACGATTGGTGCAGACAAAACACTTGCTCTTTGGGACACTATCTCTTTTAAGGAATTGCGTCGCATCAAACCTGTTCCAAAATTGGCCTGCCACAGTGTTGCATCTTGGTGTCATCCTCGAGCTCCCAACCTTGATATTCTCACTTGTGTTAAAGATTCCCACATATGGGCTATTGAGCACCCCACGTACTCAGCTCTCACAAGACCTCTTTGTGAACTTTCTTCCCTTGTCCCTCCTCAAGTGCTTGCTCCAAACAAGAAAGTTAGGGTTTACTGTATGATTGCTCATCCTTTACAACCTCATCTTGTTGCTACTGGAACCAATATTGGTGTTATCATCAGTGAACTTGATGCTAGATCTCTTCCAGCAGTAGCTCCTCTTCCAACTCCATCAGGCAGCCAAGAGCATGCTGCTGTTTATATCGTTGAAAGGGAACTAAAGTTGCTAAATTTTCAATTGTCACACACAACCAATCCATCCTTGGGAAACAATGGATCCTTATCTGAAGGAGGAAGGTTAAAGGGAGATGAGGTGCTACAAGTAAAGCAGGTCAAAAAGCACATCAGTACTCCTGTTCCACACGATGCATATTCGGTTCTTTCTGTTAGCAGTTCCGGAAAGTACCTTGCTATAATTTGGCCTGATATTCCCTACTTTTCCATCTACAAAGTAAGTGACTGGTCCATTGTTGATTCTGGAAGTGCGAGGCTTTTGGCCTGGGATACATGTCGAGACAGGTTTGCTTTGCTTGAATCTGCTGTACCTCCTAGATTTCCTGTAATTCCTAAGGGCGGATCATCACGGAAAGCAAAGGAGGCTGCTGCAGCAGCAGCACAAGCAGCGGCTGCAGCTGCTTCTGCTGCTTCCTCGGCCAGTGTTCAAGTTCGTATATTGCTCGATGATGGAACGTCAAACATATTAATGAGGTCTATTGGTAGCCGCAACGAACCGGTTGTGGGTTTGCATGGTGGGGCTCTACTTGGCGTTGCATATCGAACATCCAGGAGAATTAGTCCTGTTGCTGCAACAGCAATTTCAACAATGCCTTTATCAGGATTCGGTAACAGTGGTGTTTCTTCCTTTACAAGTTTCGACGATGGTTTTTCTTCCCATAAATCTTCGGCTGAAACAACTCCACCAAACTTTCAATTGTATAGCTGGGAAACTTTTCAGCCTGTCGGTGCGCTTCTTCCCCAGCCAGAGTGGACTGCATGGGATCAAACTGTTGAATACTGTGCCTTAGCATATCAGCATTACATTGTCATATCTTCTCTGCGTCCTCAGTATAGGTACTTGGGTGATGTAGCAATTCCATATGCTACTGGAGCTGTCTGGCACCGTAGACAACTATTTGTGGCTACTCCAACTACTATAGAATGCGTTTTTGTGGATGCTGGAGTTGCACCTATTGACATTGAAACGAAAAGGATGAAAGACGAGATGAAGTTGAAAGAAGCACAAGCTAAAGCCATTGCTGAGCATGGGGACTTAGCTCTTATTACTGTAGATGGCCCTCAAACTGTTAACCAAGAAAGGATAACGTTGAGGCCCCCAATGCTTCAGGTGGTGCGACTAGCATCATTTCAGCAAGCTCCTTCTGTGCCACCATTTTTATCATTACCCAAACAGTCGAAAGTGGATTCAGATGACTCAATGATGCAAAAAGAGTTTGAAGAAAGAAGAGCTAACGAGATAGCAGTTGGCGGTGGTGGAGTGTCAGTGGCTGTTACTCGTTTCCCAGCTGAGCAGAAACGCCCTGTAGGACCTCTAGTTGTGGTTGGTGTTCGAGATGGTGTTCTCTGGTTGATTGACAGGTACATGAGTGCACATGCTTTATCCTTAAATCATCCCGGTATTCGGTGCCGATGTCTTGCTGCCTACGGTGATGCTGTCAGTGCTGTCAAATGGGCAAGTAGGCTTGGTAGAGAACATCATGATGACCTAGCCCAATTTATGCTTGGAATGGGCTATGCCACCGAAGCTTTACATCTGCATGGAATATCTAAAAGATTGGAATTTGATCTGGCCATGCAAGGAAATGATTTAAAAAGAGCACTTCAGTGTCTTCTTACAATGAGCAACAGCAGGGATATGGGGCAAGATAATACAGGGCTTGATTTGAATGACATTCTCAGCCTAACAACTAAAAAGGAAGATATTGTGGAAACATTTCAAGGAATTACGAAATTTGCTAAAGAGTTTTTGGATTTGATTGATGCTGCTGATGCTACTGGACAAGCCGATATCGCTCGTGAGGCTCTAAAGAGGTTAGCTGCTGCAGGTTCCTTGAAAGGTGCTTTACAGGGTCATGAGTTGAGAGGATTGGCTCTGCGATTAGCGAATCATGGAGAGTTGACACGACTGAGTGGATTGGTAAACAATTTGATCTCGATCGGCTCGGGACGTGAAGCAGCGTTTGCAGCTGCAGTCTTGGGAGACAATGCTCTCATGGAAAAAGCATGGCAAGACACAGGAATGCTTGCGGAAGCTGTGCTTCATGCTCATGCTCATGGTCGACCGACATTGAAAAACTTGGTCGAGTCTTGGAACAAAATGCTTCAAAAGGAATTGGCGCACACTGTGTCGGAGAAGACCGATGCCACAGCTGCATTTTTTGCATCCCTCGAGGAACCGAAACTCACAAGCTTGGCAGATGCAGGCAAGAAGCCTGCAATTGAAATCCTTCCTCCTGGAATGCCTACTTTGTCATCTTCCATTTTAGCTCCCAAGAAGCCAACTCCTGGTGCACAAGGAGCATTGCAGCAACCAGCCAAGCCATTGCTTCTGGAAGCACCACCTGCTAATCCGCAACCACCACCAGACGGTACACCGAACCAATCAGAACTAAGCGAACAGGTTTTGGATGGCAAAGCCCCGACGTCAACAACAGGTACCGACACATCTCCGACTACTCCAGCAGAAAATGTTCCTACGACATCAAATGGTTCCGAGCCATCTGATGTACAACTATCATCCTTTAACACGACACTAGTAGAGACTCAAATACCATCGTCCGTAACTAATACAGAACATTCAGAGGCTGTTGTAGAGGCGGCCGAGATTCAGAATTCCTCTGTTCACAATTCATCGTCGACAAATGATGCAGCACTGCCATCGGAGGCCCCATCTGAGATGCCCGAGCTTCAGAATACCTCTCTTCCAAATGTATCACAATTTTGAAATCCAGCCATAGTTTAGTATAGAAAGGGAGGTTGATTTGTTCCCAGCTGTTGTAATGTATCTTCGTGTGTTTGATTGGCAGTTGCATATATCTTTTAGTTTATTATTGCATTAAATTTAGTACACTCATTCCATTATATATGCGGTTTGCATATATTCTTATGTTCATTGTTGCATTATGTTTAGAACACACTCGTTCCATTATGTGTGGTGGCCTTTGATTAGGTTGGTCATCTTCTGTGAAGATGTGAGTTGTATTTTATGTTTTTCATTGTTTTCGAAGATGTTTTTACCTGTCAATGAGTGTTCCAAAAGTGATGCATGTCAATTAATATTTACCTCAAAT

Coding sequence (CDS)

ATGTTGAGGCTAAGAGCATTCCGGCCTTCAAACGAGAAGATCGTGAAGATACAGATGCATCCGACCCATCCATGGCTTGTAACCGCCGATGCGTCGGATCACGTTTCTGTATGGAATTGGGAGCATCGGCAGGTCATTTACGAGCTCAAAGCAGGCGGAATTGATCAGAGGCGTCTTGTTGGTGCCAAGTTGGAGAAGCTCGCTGAGGGCGAATTCGATTCGAAGGGGAAGCCGACTGAAGCTATACGAGGGGGAAGTGTGAAGCAGGTAAGTTTTTATGACGACGACGTTCGATTTTGGCAACTGTGGCGGAACCGTTCCGTAGCTGCTGAAGCTCCTTCAGCTGTCAATCAAGTTACATCAGCTTTGAGTTCCCCTGCCCCTTCCACAAAAGGGAGGCATTTTCTAGTTATCTGTTGTGAAAATAAAGCCATATTCTTGGACTTGGTGACAATGCGAGGCCGTGATGTACCGAAGCAGGATCTTGACAATAAATCTCTTCTCTGCATGGAGTTCCTCTCTAAATCTTCAGGAGCAGATGGTCCTCTTGTGGCCTTTGGTGGATCAGATGGTGTTATTAGGGTCCTCTCAATGCTAACCTGGAAGCTAGTGCGTAGATATACTGGAGGTCATAAAGGATCAATCTCATGTTTGATGACCTTCATAGCTTCCTCGGGTGAGGCACTTCTGGTTTCTGGTGCTAGTGATGGCTTGCTTGTACTCTGGAGTGCGGACAACAGCCAAGATTCACGAGAACTTGTACCAAAACTAAGCTTAAAAGCGCATGATGGTGGGGTAGTAGCTGTCGAACTGTCCAGAGTGATTGGAGGTTCTCCACAACTTATCACGATTGGTGCAGACAAAACACTTGCTCTTTGGGACACTATCTCTTTTAAGGAATTGCGTCGCATCAAACCTGTTCCAAAATTGGCCTGCCACAGTGTTGCATCTTGGTGTCATCCTCGAGCTCCCAACCTTGATATTCTCACTTGTGTTAAAGATTCCCACATATGGGCTATTGAGCACCCCACGTACTCAGCTCTCACAAGACCTCTTTGTGAACTTTCTTCCCTTGTCCCTCCTCAAGTGCTTGCTCCAAACAAGAAAGTTAGGGTTTACTGTATGATTGCTCATCCTTTACAACCTCATCTTGTTGCTACTGGAACCAATATTGGTGTTATCATCAGTGAACTTGATGCTAGATCTCTTCCAGCAGTAGCTCCTCTTCCAACTCCATCAGGCAGCCAAGAGCATGCTGCTGTTTATATCGTTGAAAGGGAACTAAAGTTGCTAAATTTTCAATTGTCACACACAACCAATCCATCCTTGGGAAACAATGGATCCTTATCTGAAGGAGGAAGGTTAAAGGGAGATGAGGTGCTACAAGTAAAGCAGGTCAAAAAGCACATCAGTACTCCTGTTCCACACGATGCATATTCGGTTCTTTCTGTTAGCAGTTCCGGAAAGTACCTTGCTATAATTTGGCCTGATATTCCCTACTTTTCCATCTACAAAGTAAGTGACTGGTCCATTGTTGATTCTGGAAGTGCGAGGCTTTTGGCCTGGGATACATGTCGAGACAGGTTTGCTTTGCTTGAATCTGCTGTACCTCCTAGATTTCCTGTAATTCCTAAGGGCGGATCATCACGGAAAGCAAAGGAGGCTGCTGCAGCAGCAGCACAAGCAGCGGCTGCAGCTGCTTCTGCTGCTTCCTCGGCCAGTGTTCAAGTTCGTATATTGCTCGATGATGGAACGTCAAACATATTAATGAGGTCTATTGGTAGCCGCAACGAACCGGTTGTGGGTTTGCATGGTGGGGCTCTACTTGGCGTTGCATATCGAACATCCAGGAGAATTAGTCCTGTTGCTGCAACAGCAATTTCAACAATGCCTTTATCAGGATTCGGTAACAGTGGTGTTTCTTCCTTTACAAGTTTCGACGATGGTTTTTCTTCCCATAAATCTTCGGCTGAAACAACTCCACCAAACTTTCAATTGTATAGCTGGGAAACTTTTCAGCCTGTCGGTGCGCTTCTTCCCCAGCCAGAGTGGACTGCATGGGATCAAACTGTTGAATACTGTGCCTTAGCATATCAGCATTACATTGTCATATCTTCTCTGCGTCCTCAGTATAGGTACTTGGGTGATGTAGCAATTCCATATGCTACTGGAGCTGTCTGGCACCGTAGACAACTATTTGTGGCTACTCCAACTACTATAGAATGCGTTTTTGTGGATGCTGGAGTTGCACCTATTGACATTGAAACGAAAAGGATGAAAGACGAGATGAAGTTGAAAGAAGCACAAGCTAAAGCCATTGCTGAGCATGGGGACTTAGCTCTTATTACTGTAGATGGCCCTCAAACTGTTAACCAAGAAAGGATAACGTTGAGGCCCCCAATGCTTCAGGTGGTGCGACTAGCATCATTTCAGCAAGCTCCTTCTGTGCCACCATTTTTATCATTACCCAAACAGTCGAAAGTGGATTCAGATGACTCAATGATGCAAAAAGAGTTTGAAGAAAGAAGAGCTAACGAGATAGCAGTTGGCGGTGGTGGAGTGTCAGTGGCTGTTACTCGTTTCCCAGCTGAGCAGAAACGCCCTGTAGGACCTCTAGTTGTGGTTGGTGTTCGAGATGGTGTTCTCTGGTTGATTGACAGGTACATGAGTGCACATGCTTTATCCTTAAATCATCCCGGTATTCGGTGCCGATGTCTTGCTGCCTACGGTGATGCTGTCAGTGCTGTCAAATGGGCAAGTAGGCTTGGTAGAGAACATCATGATGACCTAGCCCAATTTATGCTTGGAATGGGCTATGCCACCGAAGCTTTACATCTGCATGGAATATCTAAAAGATTGGAATTTGATCTGGCCATGCAAGGAAATGATTTAAAAAGAGCACTTCAGTGTCTTCTTACAATGAGCAACAGCAGGGATATGGGGCAAGATAATACAGGGCTTGATTTGAATGACATTCTCAGCCTAACAACTAAAAAGGAAGATATTGTGGAAACATTTCAAGGAATTACGAAATTTGCTAAAGAGTTTTTGGATTTGATTGATGCTGCTGATGCTACTGGACAAGCCGATATCGCTCGTGAGGCTCTAAAGAGGTTAGCTGCTGCAGGTTCCTTGAAAGGTGCTTTACAGGGTCATGAGTTGAGAGGATTGGCTCTGCGATTAGCGAATCATGGAGAGTTGACACGACTGAGTGGATTGGTAAACAATTTGATCTCGATCGGCTCGGGACGTGAAGCAGCGTTTGCAGCTGCAGTCTTGGGAGACAATGCTCTCATGGAAAAAGCATGGCAAGACACAGGAATGCTTGCGGAAGCTGTGCTTCATGCTCATGCTCATGGTCGACCGACATTGAAAAACTTGGTCGAGTCTTGGAACAAAATGCTTCAAAAGGAATTGGCGCACACTGTGTCGGAGAAGACCGATGCCACAGCTGCATTTTTTGCATCCCTCGAGGAACCGAAACTCACAAGCTTGGCAGATGCAGGCAAGAAGCCTGCAATTGAAATCCTTCCTCCTGGAATGCCTACTTTGTCATCTTCCATTTTAGCTCCCAAGAAGCCAACTCCTGGTGCACAAGGAGCATTGCAGCAACCAGCCAAGCCATTGCTTCTGGAAGCACCACCTGCTAATCCGCAACCACCACCAGACGGTACACCGAACCAATCAGAACTAAGCGAACAGGTTTTGGATGGCAAAGCCCCGACGTCAACAACAGGTACCGACACATCTCCGACTACTCCAGCAGAAAATGTTCCTACGACATCAAATGGTTCCGAGCCATCTGATGTACAACTATCATCCTTTAACACGACACTAGTAGAGACTCAAATACCATCGTCCGTAACTAATACAGAACATTCAGAGGCTGTTGTAGAGGCGGCCGAGATTCAGAATTCCTCTGTTCACAATTCATCGTCGACAAATGATGCAGCACTGCCATCGGAGGCCCCATCTGAGATGCCCGAGCTTCAGAATACCTCTCTTCCAAATGTATCACAATTTTGA

Protein sequence

MLRLRAFRPSNEKIVKIQMHPTHPWLVTADASDHVSVWNWEHRQVIYELKAGGIDQRRLVGAKLEKLAEGEFDSKGKPTEAIRGGSVKQVSFYDDDVRFWQLWRNRSVAAEAPSAVNQVTSALSSPAPSTKGRHFLVICCENKAIFLDLVTMRGRDVPKQDLDNKSLLCMEFLSKSSGADGPLVAFGGSDGVIRVLSMLTWKLVRRYTGGHKGSISCLMTFIASSGEALLVSGASDGLLVLWSADNSQDSRELVPKLSLKAHDGGVVAVELSRVIGGSPQLITIGADKTLALWDTISFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELSSLVPPQVLAPNKKVRVYCMIAHPLQPHLVATGTNIGVIISELDARSLPAVAPLPTPSGSQEHAAVYIVERELKLLNFQLSHTTNPSLGNNGSLSEGGRLKGDEVLQVKQVKKHISTPVPHDAYSVLSVSSSGKYLAIIWPDIPYFSIYKVSDWSIVDSGSARLLAWDTCRDRFALLESAVPPRFPVIPKGGSSRKAKEAAAAAAQAAAAAASAASSASVQVRILLDDGTSNILMRSIGSRNEPVVGLHGGALLGVAYRTSRRISPVAATAISTMPLSGFGNSGVSSFTSFDDGFSSHKSSAETTPPNFQLYSWETFQPVGALLPQPEWTAWDQTVEYCALAYQHYIVISSLRPQYRYLGDVAIPYATGAVWHRRQLFVATPTTIECVFVDAGVAPIDIETKRMKDEMKLKEAQAKAIAEHGDLALITVDGPQTVNQERITLRPPMLQVVRLASFQQAPSVPPFLSLPKQSKVDSDDSMMQKEFEERRANEIAVGGGGVSVAVTRFPAEQKRPVGPLVVVGVRDGVLWLIDRYMSAHALSLNHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLHGISKRLEFDLAMQGNDLKRALQCLLTMSNSRDMGQDNTGLDLNDILSLTTKKEDIVETFQGITKFAKEFLDLIDAADATGQADIAREALKRLAAAGSLKGALQGHELRGLALRLANHGELTRLSGLVNNLISIGSGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVESWNKMLQKELAHTVSEKTDATAAFFASLEEPKLTSLADAGKKPAIEILPPGMPTLSSSILAPKKPTPGAQGALQQPAKPLLLEAPPANPQPPPDGTPNQSELSEQVLDGKAPTSTTGTDTSPTTPAENVPTTSNGSEPSDVQLSSFNTTLVETQIPSSVTNTEHSEAVVEAAEIQNSSVHNSSSTNDAALPSEAPSEMPELQNTSLPNVSQF

Homology

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BLAST of CmaCh08G002550 vs. ExPASy Swiss-Prot
Match: Q54K14 (TSET complex member tstF OS=Dictyostelium discoideum OX=44689 GN=tstF PE=1 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 9.0e-41
Identity = 225/961 (23.41%), Postives = 379/961 (39.44%), Query Frame = 0


Query: 85   GSVKQVSFYDDDVRFWQLWRNRSVAAEAPSAVNQVTSALSSPAPSTKGRHFLVICCENKA 144
            G +K + FYD           RS   + P         +S   PS     ++V+  EN+ 
Sbjct: 229  GQIKFIYFYDK--------HTRSCKDKKPKISQNKLQNISKAQPSVGIEDYIVVVAENRI 288

Query: 145  IFLDLVTMRGRDVPKQDLDNKSLLCMEFLSKSSGADGPLVAFGGSDGVIRVLSMLTWKLV 204
            +F++  + R R+V     +NKS   +EF S S     P VAFGG D +IR+ +   W++ 
Sbjct: 289  VFINYHSQRLREVKIPAFENKSPNSVEFFSNS-----PFVAFGGPDSMIRLWNTEKWEIE 348

Query: 205  RRYTGGHKGSISCLMTFIASSGEALLVSGASDGLLVLWSADNSQDSRELVPKLSLKAHDG 264
            ++  G  KG+I  L   I   GE  LVSG +DG + +W+         L  + S K H+ 
Sbjct: 349  KQLAGHPKGTIVKLKA-IEIEGE-FLVSGGTDGFVCVWNVKTG----SLATQFS-KVHE- 408

Query: 265  GVVAVELSRVIGGSPQLITIGADKTLALWDTISFKELRRIKPVPKLACHSVASWCHPRAP 324
             +V +    V G   Q++ +  D+ + ++D  + KE+ ++    K    S+ ++ H R  
Sbjct: 409  -IVDLSYDYVTG---QVMALTQDRHIMIYDLNTLKEVSKVS-CGKKEFFSIEAYYHSRF- 468

Query: 325  NLDILTCVKDSHIWAIEHPTYSALTRPL-CELSSLVPPQVLAPNKKVRVYCMIAHPLQPH 384
            N D+L  +K      +   + S  T+    +L +L+ P   +  +K ++Y ++ HPLQPH
Sbjct: 469  NQDLLLGMKQPA--QVSFFSRSGSTKEYSIDLDALLNP---SKKEKSKLYKVVQHPLQPH 528

Query: 385  LVATGTNIGVIISELDARSLPAVAPLPTPSGSQEHAAVYIVERELKLLNFQLSHTTNPSL 444
            L+    N  V I    A S+P                              +  TT  SL
Sbjct: 529  LLLCWLNKSVYIVSTLATSIP------------------------------MQVTTFNSL 588

Query: 445  GNNGSL--SEGGRLKGDEVLQVKQVKKHISTPVP---HDAYSVLSVSSSGKYLAIIWPDI 504
             N+ ++     G L    +  V   +K + TP+    ++ Y  L +S SGKYL+I     
Sbjct: 589  SNDHTVYYPFAGYLYSSSLTNVLTCEK-VQTPIQLSLNENYK-LDISPSGKYLSIHAISS 648

Query: 505  PYFSIYKVSDWSIVDSGSARLLAWDTCRDRFALLESAVPPRFPVIPKGGSSRKAKEAAAA 564
              + I ++S W I++ G A  +AW          +S V  +F  + K   S  + +    
Sbjct: 649  GNYQILEISTWKILEKGQALDVAWSGKGK-----DSTVDEKFGKLEKILESVDSVKKKKT 708

Query: 565  AAQAAAAAASAASSASVQVRILL---DDGTSNILMRSIGSRNEPVVGLHGGALLGVAYRT 624
                 +   S     +V  +ILL   +   +N++   +   NE  +   GG +LGV ++ 
Sbjct: 709  LGILPSIVKSTKKEETVISKILLKTKEFNNNNVVQELLLHANEDRIS--GGLMLGVYHKE 768

Query: 625  SRR----ISPVAATAISTMPLSGFGNSGVSSFTSFDDGFSSHKSSA-------------- 684
            S      ++  +  +I +   SG  +SG S+  +   G SS  +SA              
Sbjct: 769  STNSNGTLNYGSGGSIGSGSGSGTISSGSSNLINGSVGGSSSNNSANSNNSNNNNNNNNN 828

Query: 685  -------------------------ETTPPNFQLYSWETFQPVGALLPQPEWTAWDQTVE 744
                                     ET   +FQL  W T QPVG  LP P    WDQ   
Sbjct: 829  NSNNSNNNNNSSQPILEPPIITTGEETESKSFQLLDWWTLQPVGESLPPPLKIYWDQNQT 888

Query: 745  YCALAYQHYIVISSLRPQYRYLGDVAIPYATGAVWHRRQLFVATPTTIECVFVDAGVAPI 804
            +CA+A+ HY  +  LRP +  L   ++   T AVWH   LF +T   I+C+F        
Sbjct: 889  HCAIAFTHYFFVFKLRPTFHMLCRWSLG-ITSAVWHNNTLFFSTHNDIQCIFPH------ 948

Query: 805  DIETKRMKDEMKLKEAQAKAIAEHGDLALITVDGPQTVNQERITLRPPMLQVVRLASFQQ 864
                                  +H    +I       V  E          +  L+S   
Sbjct: 949  ----------------------KHESSPIILASSTGNVFPE---------DLYDLSSGSL 1008

Query: 865  APSVP--PFLSLPKQSKVDSDDSMMQKEFEERRANEIAVGGGGVSVAVTRFPAEQKRPVG 924
            + S P   F +LP                                           +P G
Sbjct: 1009 STSKPNQSFSTLP-----------------------------------------NIKPTG 1039

Query: 925  PLVVVGVRDGVLWLIDRYMSAHALSLNHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDL 984
            P+ ++ V +  L L+D     + + L H  ++   LA       A+K ++ +  ++H  +
Sbjct: 1069 PISLIEVNNEGLVLLDSNYKFYCIPLTHYLLKFFILAQMEAIDLAMKCSTMVDPKYHYLM 1039

Query: 985  AQFMLGMGYATEALHLHGISKRLEFDLAMQGNDLKRALQCLLTMSNSRDMGQDNTGLDLN 992
            A+F+   G+  E L ++GIS  L+  + +     + +L  +  ++ +   GQ  T  + N
Sbjct: 1129 AKFLTVRGHPKECLQMNGISNFLKLQICLNNEAFETSLDIVPLITEAIKSGQSITNENNN 1039

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BLAST of CmaCh08G002550 vs. ExPASy Swiss-Prot
Match: Q0CCS0 (Probable cytosolic iron-sulfur protein assembly protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=cia1 PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 2.3e-04
Identity = 37/134 (27.61%), Postives = 57/134 (42.54%), Query Frame = 0


Query: 182 PLVAFGGSDGVIRVLSMLTWKLVRRYTGGHKGSISCLMTFIASSGEALLVSGASDGLLVL 241
           P+VA   SD  +RV S+  ++L+   TGGHK S+          GE++L +G+ D  + +
Sbjct: 32  PIVATCSSDKTVRVYSLSNFRLLSTITGGHKRSVRTCAWKPHVQGESVLATGSFDATVGI 91

Query: 242 W-------------------SADNSQDSRELVPKLSLKAHDGGVVAVELSRVIGGSPQLI 297
           W                   S D   DS E    + L  HD  V +V  S        L 
Sbjct: 92  WRRWDSYGLLSSDHTTAAAASEDADSDSDEWRFAVLLDGHDSEVKSVSWS---ASGMLLA 151

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BLAST of CmaCh08G002550 vs. ExPASy Swiss-Prot
Match: Q54S79 (WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum OX=44689 GN=wdr3 PE=3 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 4.0e-04
Identity = 38/116 (32.76%), Postives = 58/116 (50.00%), Query Frame = 0


Query: 180 DGPLVAFGGSDGVIRVLSMLTWKLVRRYTGGHKGSISCLMTFIASSGEALLVSGASDGLL 239
           DG L+A G SDG IR+ SM  ++L +    GH+GS++  MTF       +LVSG+ D  +
Sbjct: 70  DGALLASGYSDGSIRIWSMSDYQL-QAVFNGHRGSVT-TMTFNRLGN--ILVSGSKDTEV 129

Query: 240 VLWSADNSQDSRELVPKLSLKAHDGGVVAVELSRVIGGSPQLITIGADKTLALWDT 296
           ++W                L+ H   + +V+L   +  S  LIT   D  + +WDT
Sbjct: 130 IVWDIITESG------LFRLRGHRDQITSVKL---LERSNHLITSSKDGFIKIWDT 172

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BLAST of CmaCh08G002550 vs. TAIR 10
Match: AT5G24710.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 2009.6 bits (5205), Expect = 0.0e+00
Identity = 1051/1353 (77.68%), Postives = 1158/1353 (85.59%), Query Frame = 0


Query: 1    MLRLRAFRPSNEKIVKIQMHPTHPWLVTADASDHVSVWNWEHRQVIYELKAGGIDQRRLV 60
            MLR RAFR +N KIVKIQ+HPTHPWLVTAD SDHVSVWNWEHRQVIYELKAGG+D+RRLV
Sbjct: 1    MLRARAFRQTNGKIVKIQVHPTHPWLVTADDSDHVSVWNWEHRQVIYELKAGGVDERRLV 60

Query: 61   GAKLEKLAEGEFDSKGKPTEAIRGGSVKQVSFYDDDVRFWQLWRNRSVAAEAPSAVNQVT 120
            GAKLEKLAEGE D K KPTEAIRGGSVKQV FYDDDVR+WQLWRNRS AAE+PSAVN +T
Sbjct: 61   GAKLEKLAEGESDYKAKPTEAIRGGSVKQVKFYDDDVRYWQLWRNRSAAAESPSAVNHLT 120

Query: 121  SALSSPAPSTKGRHFLVICCENKAIFLDLVTMRGRDVPKQDLDNKSLLCMEFLSKSSGAD 180
            SA +SPAPSTKGRHFLVICCENKAIFLDLVTMRGRDVPKQ+LDNKSLLCMEFLS+SSG D
Sbjct: 121  SAFTSPAPSTKGRHFLVICCENKAIFLDLVTMRGRDVPKQELDNKSLLCMEFLSRSSGGD 180

Query: 181  GPLVAFGGSDGVIRVLSMLTWKLVRRYTGGHKGSISCLMTFIASSGEALLVSGASDGLLV 240
            GPLVAFG +DGVIRVLSM+TWKL RRYTGGHKGSI CLM F+ASSGEALLVSG SDGLLV
Sbjct: 181  GPLVAFGSTDGVIRVLSMITWKLARRYTGGHKGSIYCLMNFMASSGEALLVSGGSDGLLV 240

Query: 241  LWSADNSQDSRELVPKLSLKAHDGGVVAVELSRVIGGSPQLITIGADKTLALWDTISFKE 300
            LWSAD+  DSRELVPKLSLKAHDGGVVAVELSRV G +PQLITIGADKTLA+WDT++FKE
Sbjct: 241  LWSADHGADSRELVPKLSLKAHDGGVVAVELSRVSGSAPQLITIGADKTLAIWDTMTFKE 300

Query: 301  LRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELSSLVP 360
            LRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIW+IEHPTYSALTRPLCELSSLVP
Sbjct: 301  LRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWSIEHPTYSALTRPLCELSSLVP 360

Query: 361  PQVLAPNKKVRVYCMIAHPLQPHLVATGTNIGVIISELDARSLPAVAPLPTPSGSQEHAA 420
            PQVLA ++K+RVYCM+AHPLQPHLVATGTN+G+I+SE D R++P+ APLP   GS+E++A
Sbjct: 361  PQVLATHRKLRVYCMVAHPLQPHLVATGTNVGIIVSEFDPRAIPSAAPLPALPGSRENSA 420

Query: 421  VYIVERELKLLNFQLSHTTNPSLGNNGSLSEGGRLKGD--EVLQVKQVKKHISTPVPHDA 480
            +YI+ RELKLLNFQLS+T NPSLGNN +LSE G  KGD  E L VKQ KK I  PVPHD+
Sbjct: 421  IYILGRELKLLNFQLSNTANPSLGNNSALSESGLSKGDPGEQLTVKQTKKQIVAPVPHDS 480

Query: 481  YSVLSVSSSGKYLAIIWPDIPYFSIYKVSDWSIVDSGSARLLAWDTCRDRFALLESAVPP 540
            YSVLSVSSSGKY+A++WPDI YFSIYKVSDWSIVDSGSARLLAWDTCRDRFA+LES +P 
Sbjct: 481  YSVLSVSSSGKYVAVVWPDILYFSIYKVSDWSIVDSGSARLLAWDTCRDRFAILESVLPH 540

Query: 541  RFPVIPKGGSSRKAKEAAAAAAQAAAAAASAASSASVQVRILLDDGTSNILMRSIGSRNE 600
            R P+IPKGGSSRKAKEAAAAAAQ AAAAASAASSASVQVRILLDDGTSNILMRS+G R+E
Sbjct: 541  RMPIIPKGGSSRKAKEAAAAAAQ-AAAAASAASSASVQVRILLDDGTSNILMRSVGGRSE 600

Query: 601  PVVGLHGGALLGVAYRTSRRISPVAATAIST---MPLSGFGNSGVSSFTSFDDGFSSHKS 660
            PV+GLHGGALLG+ YRTSRRISPVAATAIST   MPLSGFGNS VSSF+S+DDGFSS K 
Sbjct: 601  PVIGLHGGALLGIGYRTSRRISPVAATAISTIQSMPLSGFGNSNVSSFSSYDDGFSSQK- 660

Query: 661  SAETTPPNFQLYSWETFQPVGALLPQPEWTAWDQTVEYCALAYQHYIVISSLRPQYRYLG 720
            SAE+ P N+QLYSWE F+PVG +LPQPEWTAWDQTVEYCA AYQ Y+VISSLRPQYRYLG
Sbjct: 661  SAESAPLNYQLYSWENFEPVGGMLPQPEWTAWDQTVEYCAFAYQQYMVISSLRPQYRYLG 720

Query: 721  DVAIPYATGAVWHRRQLFVATPTTIECVFVDAGVAPIDIETKRMKDEMKLKEAQAKAIAE 780
            DVAI +ATGAVWHRRQLFVATPTTIECVFVDAGV+ IDIET++MK+EMKLKEAQA+A+AE
Sbjct: 721  DVAIAHATGAVWHRRQLFVATPTTIECVFVDAGVSEIDIETRKMKEEMKLKEAQARAVAE 780

Query: 781  HGDLALITVDGPQTVNQERITLRPPMLQVVRLASFQQAPSVPPFLSLPKQSKVDSDDSMM 840
            HG+LALITV+G Q   QERI+LRPPMLQVVRLASFQ APSVPPFLSLP+QS+ DSDD M 
Sbjct: 781  HGELALITVEGSQAAKQERISLRPPMLQVVRLASFQNAPSVPPFLSLPRQSRGDSDDIM- 840

Query: 841  QKEFEERRANEIAVGGGGVSVAVTRFPAEQKRPVGPLVVVGVRDGVLWLIDRYMSAHALS 900
                +ERR NE+AVGGGGVSVAVTRFP EQKRPVGPLVV GVRDGVLWLIDRYM AHA+S
Sbjct: 841  ----DERRVNEVAVGGGGVSVAVTRFPVEQKRPVGPLVVAGVRDGVLWLIDRYMCAHAIS 900

Query: 901  LNHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLHGISKRLEF 960
            LNHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHL GISKRLEF
Sbjct: 901  LNHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEF 960

Query: 961  DLAMQGNDLKRALQCLLTMSNSRDMGQDNTGLDLNDILSLT-TKKEDIVETFQGITKFAK 1020
            DLAMQ NDLKRAL CLLTMSNS+D+GQD  GLDL+DILSLT TKKED+VE  +GI KFAK
Sbjct: 961  DLAMQSNDLKRALHCLLTMSNSKDIGQDGVGLDLSDILSLTATKKEDVVEAVEGIVKFAK 1020

Query: 1021 EFLDLIDAADATGQADIAREALKRLAAAGSLKGALQGHELRGLALRLANHGELTRLSGLV 1080
            EFLDLIDAADATG ADIAREALKRLA AGS+KGALQGHELRGL+LRLANHGELTRLSGLV
Sbjct: 1021 EFLDLIDAADATGHADIAREALKRLATAGSVKGALQGHELRGLSLRLANHGELTRLSGLV 1080

Query: 1081 NNLISIGSGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVESWNKM 1140
            NNLISIG GRE+AF+AAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLV++WNK 
Sbjct: 1081 NNLISIGLGRESAFSAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNKT 1140

Query: 1141 LQKELAHTVSEKTDATAAFFASLEEPKLTSLADAGKKPAIEILPPGMPTLSSSILAPKKP 1200
            LQKE+    S KTDA +AF ASLE+PKLTSL+DA +KP IEILPPGM ++ +SI APKKP
Sbjct: 1141 LQKEVEKAPSSKTDAASAFLASLEDPKLTSLSDASRKPPIEILPPGMSSIFASITAPKKP 1200

Query: 1201 ---TPGAQG------ALQQPAKPLLLEAPPANPQPPPDGTPNQSELSEQ-------VLDG 1260
                  AQ       AL++P KPL +EAPP++  P  +  P  +  +E        V + 
Sbjct: 1201 LLTQKTAQPEVAKPLALEEPTKPLAIEAPPSSEAPQTESAPETAAAAESPAPETAAVAES 1260

Query: 1261 KAP-TSTTGTDTSPTTPAENV--PTTSNGSEPSDVQLSSFNTTLVETQIPSSVTNTEHSE 1320
             AP T+      +  T A  V  P T   SEP  V+     T+L E   PSS  NTE   
Sbjct: 1261 PAPGTAAVAEAPASETAAAPVDGPVTETVSEPPPVEKE--ETSLEEKSDPSSTPNTE--- 1320

Query: 1321 AVVEAAEIQNSSVHNSSSTNDAALPSEAPSEMP 1329
                A   +N+S   ++  +    P E  +  P
Sbjct: 1321 ---TATSTENTSQTTTTPESVTTAPPEPITTAP 1338

[Close]

BLAST of CmaCh08G002550 vs. TAIR 10
Match: AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 47.8 bits (112), Expect = 8.2e-05
Identity = 34/129 (26.36%), Postives = 64/129 (49.61%), Query Frame = 0


Query: 180 DGPLVAFGGSDGVIRVLSMLTWKLVRRYTGGHKGSISCLMTFIASSGEALLVSGASDGLL 239
           +G  +  GG  G I +  + T KL++++  GH  S++CL   + S  ++LLVSG+ DG +
Sbjct: 89  EGTYLVGGGISGDIYLWEVATGKLLKKW-HGHYRSVTCL---VFSGDDSLLVSGSQDGSI 148

Query: 240 VLWSADNSQDSRELVPKLSLKAHDGGVVAVELSRVI----GGSPQLITIGADKTLALWDT 299
            +WS     D  +     +L  H+     + ++ ++    G +  +I+   D+T  +W  
Sbjct: 149 RVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSL 208

Query: 300 ISFKELRRI 305
              K L+ I
Sbjct: 209 SRGKLLKNI 213

[Close]

BLAST of CmaCh08G002550 vs. TAIR 10
Match: AT1G49540.1 (elongator protein 2 )

HSP 1 Score: 44.3 bits (103), Expect = 9.1e-04
Identity = 25/87 (28.74%), Postives = 44/87 (50.57%), Query Frame = 0


Query: 171 EFLSKSSGADGPLVAFGGSDGVIRVLSMLT----WKLVRRYTGGHKGSISCLMTFIASSG 230
           +F  K+   D   +  G SDG+I +  + T    W+ V +    HK  ++C+  ++ S  
Sbjct: 72  KFAFKAKKLDRQYLLSGDSDGIIILWELSTLNNDWRHVLQLPLSHKKGVTCITAYMVSET 131

Query: 231 EALLVSGASDGLLVLWSAD-NSQDSRE 253
           +A+  S +SDG++ +W     SQ S E
Sbjct: 132 DAMFASASSDGVVNVWDVSFPSQPSEE 158

The following BLAST results are available for this feature:

BLAST of CmaCh08G002550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54K14	9.0e-41	23.41	TSET complex member tstF OS=Dictyostelium discoideum OX=44689 GN=tstF PE=1 SV=1	[more]
Q0CCS0	2.3e-04	27.61	Probable cytosolic iron-sulfur protein assembly protein 1 OS=Aspergillus terreus...	[more]
Q54S79	4.0e-04	32.76	WD repeat-containing protein 3 homolog OS=Dictyostelium discoideum OX=44689 GN=w...	[more]

BLAST of CmaCh08G002550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24710.1	0.0e+00	77.68	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49180.1	8.2e-05	26.36	Transducin/WD40 repeat-like superfamily protein	[more]
AT1G49540.1	9.1e-04	28.74	elongator protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 1..39 e-value: 28.0 score: 7.9 coord: 200..243 e-value: 0.12 score: 21.5 coord: 252..294 e-value: 0.62 score: 18.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 259..303 score: 8.770704
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 225..396 e-value: 6.2E-13 score: 50.3
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 5..224 e-value: 1.3E-13 score: 52.8
None	No IPR available	GENE3D	1.25.40.470		coord: 904..1153 e-value: 6.8E-29 score: 103.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1211..1225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1303..1341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1211..1271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1226..1271
None	No IPR available	PANTHER	PTHR45521	TSET COMPLEX MEMBER TSTF	coord: 1..1325
None	No IPR available	PANTHER	PTHR45521:SF3	BNAC07G49640D PROTEIN	coord: 1..1325
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 6..388

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G002550.1	CmaCh08G002550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding