CmaCh08G001180 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G001180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	WRKY protein
Location	Cma_Chr08: 617192 .. 618506 (-)
RNA-Seq Expression	CmaCh08G001180
Synteny	CmaCh08G001180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTTGTGAATCTAATCCAAGAGCTTAATCAGGGGAGAAACCTCGCTCACCAATTACGCGATCATCTTCATCCTTCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCATCTTCAAATGGCATTCTCTTGATCGATCAGATTCTTCGTTCTTACGAGAACGCGCTTTCTGTTCTCGCCGGCGGCAGCGGCGGCGGCGATGAAGAAATCCCGCCCATCATTGCTGCTGTGAAACATAGAGACGTATCGAAGAAGAGGTAATTTCGTAATCGATTGTTTTGGGATTTTAGGGCTTTGTTGGTTCGTGATTTTGATTGGATTTTAGGGTTTTGTGTTTTGCAGAAAGGTAATGGCGAAATGGAGTGAGCTGGTTAAGATTCCTTCTGTCTCCGCCATTGGAGCTCTTCCTGATGATGGATTTAGCTGGAGAAAGTATGGGCAGAAGGACATTCTTGGATCCAAATTCCCCAGGTCGCTTACCTTTTTATCTCATTATATTCTTCTCTGTTTCAAATCGTGTTCGTAGTGTTCATCTGTTCTTTTGTTCTTGTTCCTGCGGGTTTAATCATCTAAACTGAAAAGAGTTTTTGAGAATCGTTGAGAGATGAATCTTCGATCATTGATCGATTTATAGGTAAGTAATACGTCTCCATTGGTATGCTATTTTGAAGAGCTTATGCTCGAAGTGGATAATATCATACTCCTAATAAATTTTCGATTTGATGGATGAGAACAATGATTATGATCGATTTAGTTCATCACGTCAACGATTTATGAAGTAATATGACAGCAAAACGTAATCATTTTGTTGTGTTTTGGGAATTGCAGAGGCTATTTCAGATGCTCACACCGCTTTGCACAAGGATGTTCAGCAACAAAACTAGTTCAAAGATCAGACAATGATCCATCCATGTATGAAATAACGTACAGAGGTAAACACACCTGCAACAAACCTCTTCATTCAAACACCCCAAAACAAGAACAAAACCCACCACAATCACAGCAACATCCAATGCCAATGCCACCAAAACAAGAACAAGAGGAGCCATTGCAGCAGCAGGATGTCCCATTGTGCCTCACCGTCAGCTCGGACAATGTGGACGACAGCCTCCGACGACCCTTTTGTCCCCTGTCGCCATTGTTTCGATCTGAAGTTGAAGATGCTCAAAGCCCTTTTAGGGGAAGTGAGTTGGAGGGGTTAGAATTTTGGTGTATTGGGGATGGAGATTTGGTCTCAGTTCCGAGTTCGTTCACCAATATTTCCATGGGAGATTTGGAGGAGTATTGTAGTTTGGAATCCTTCTGCTGA

mRNA sequence

ATGGAGTTTGTGAATCTAATCCAAGAGCTTAATCAGGGGAGAAACCTCGCTCACCAATTACGCGATCATCTTCATCCTTCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCATCTTCAAATGGCATTCTCTTGATCGATCAGATTCTTCGTTCTTACGAGAACGCGCTTTCTGTTCTCGCCGGCGGCAGCGGCGGCGGCGATGAAGAAATCCCGCCCATCATTGCTGCTGTGAAACATAGAGACGTATCGAAGAAGAGAAAGGTAATGGCGAAATGGAGTGAGCTGGTTAAGATTCCTTCTGTCTCCGCCATTGGAGCTCTTCCTGATGATGGATTTAGCTGGAGAAAGTATGGGCAGAAGGACATTCTTGGATCCAAATTCCCCAGAGGCTATTTCAGATGCTCACACCGCTTTGCACAAGGATGTTCAGCAACAAAACTAGTTCAAAGATCAGACAATGATCCATCCATGTATGAAATAACGTACAGAGGTAAACACACCTGCAACAAACCTCTTCATTCAAACACCCCAAAACAAGAACAAAACCCACCACAATCACAGCAACATCCAATGCCAATGCCACCAAAACAAGAACAAGAGGAGCCATTGCAGCAGCAGGATGTCCCATTGTGCCTCACCGTCAGCTCGGACAATGTGGACGACAGCCTCCGACGACCCTTTTGTCCCCTGTCGCCATTGTTTCGATCTGAAGTTGAAGATGCTCAAAGCCCTTTTAGGGGAAGTGAGTTGGAGGGGTTAGAATTTTGGTGTATTGGGGATGGAGATTTGGTCTCAGTTCCGAGTTCGTTCACCAATATTTCCATGGGAGATTTGGAGGAGTATTGTAGTTTGGAATCCTTCTGCTGA

Coding sequence (CDS)

ATGGAGTTTGTGAATCTAATCCAAGAGCTTAATCAGGGGAGAAACCTCGCTCACCAATTACGCGATCATCTTCATCCTTCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCCATCTTCAAATGGCATTCTCTTGATCGATCAGATTCTTCGTTCTTACGAGAACGCGCTTTCTGTTCTCGCCGGCGGCAGCGGCGGCGGCGATGAAGAAATCCCGCCCATCATTGCTGCTGTGAAACATAGAGACGTATCGAAGAAGAGAAAGGTAATGGCGAAATGGAGTGAGCTGGTTAAGATTCCTTCTGTCTCCGCCATTGGAGCTCTTCCTGATGATGGATTTAGCTGGAGAAAGTATGGGCAGAAGGACATTCTTGGATCCAAATTCCCCAGAGGCTATTTCAGATGCTCACACCGCTTTGCACAAGGATGTTCAGCAACAAAACTAGTTCAAAGATCAGACAATGATCCATCCATGTATGAAATAACGTACAGAGGTAAACACACCTGCAACAAACCTCTTCATTCAAACACCCCAAAACAAGAACAAAACCCACCACAATCACAGCAACATCCAATGCCAATGCCACCAAAACAAGAACAAGAGGAGCCATTGCAGCAGCAGGATGTCCCATTGTGCCTCACCGTCAGCTCGGACAATGTGGACGACAGCCTCCGACGACCCTTTTGTCCCCTGTCGCCATTGTTTCGATCTGAAGTTGAAGATGCTCAAAGCCCTTTTAGGGGAAGTGAGTTGGAGGGGTTAGAATTTTGGTGTATTGGGGATGGAGATTTGGTCTCAGTTCCGAGTTCGTTCACCAATATTTCCATGGGAGATTTGGAGGAGTATTGTAGTTTGGAATCCTTCTGCTGA

Protein sequence

MEFVNLIQELNQGRNLAHQLRDHLHPSLSSSSSSSSSSPSSNGILLIDQILRSYENALSVLAGGSGGGDEEIPPIIAAVKHRDVSKKRKVMAKWSELVKIPSVSAIGALPDDGFSWRKYGQKDILGSKFPRGYFRCSHRFAQGCSATKLVQRSDNDPSMYEITYRGKHTCNKPLHSNTPKQEQNPPQSQQHPMPMPPKQEQEEPLQQQDVPLCLTVSSDNVDDSLRRPFCPLSPLFRSEVEDAQSPFRGSELEGLEFWCIGDGDLVSVPSSFTNISMGDLEEYCSLESFC

Homology

[Close]

BLAST of CmaCh08G001180 vs. ExPASy Swiss-Prot
Match: Q9SUP6 (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-28
Identity = 92/257 (35.80%), Postives = 131/257 (50.97%), Query Frame = 0


Query: 6   LIQELNQGRNLAHQLRDHLH--PSLSSSSSSSSSSPSSNGILLIDQILRSYENALSVLAG 65
           L+ EL  G + A +L+  L   PS SSS SS +++ +    +L+ QI+ SYE +L +L  
Sbjct: 14  LLSELINGFDAAKKLQARLREAPSPSSSFSSPATAVAETNEILVKQIVSSYERSLLLLNW 73

Query: 66  GSGGGDEEIPPIIAAV---------------------------------KHRD----VSK 125
            S    + IP  +  V                                  HR      SK
Sbjct: 74  SSSPSVQLIPTPVTVVPVANPGSVPESPASINGSPRSEEFADGGGSSESHHRQDYIFNSK 133

Query: 126 KRKVMAKWSELVKIPSVSAIGALPDDGFSWRKYGQKDILGSKFPRGYFRCSHRFAQGCSA 185
           KRK++ KWSE V+I     +    DD FSWRKYGQKDILG+KFPR Y+RC+HR  Q C A
Sbjct: 134 KRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWA 193

Query: 186 TKLVQRSDNDPSMYEITYRGKHTCNKPLHSNTPKQEQNPPQSQQHPMPMPPKQEQEEPLQ 224
           TK VQRSD D +++E+TYRG HTC++ +    P      P+ +Q     P   ++ + + 
Sbjct: 194 TKQVQRSDGDATVFEVTYRGTHTCSQAITRTPPLAS---PEKRQDTRVKPAITQKPKDI- 253

[Close]

BLAST of CmaCh08G001180 vs. ExPASy Swiss-Prot
Match: Q9FL62 (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana OX=3702 GN=WRKY30 PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.0e-26
Identity = 75/195 (38.46%), Postives = 109/195 (55.90%), Query Frame = 0


Query: 11  NQGRNLAHQLRDHLHPSLSSSSSSSSSSPSSNGILLIDQILRSYENALSVL-------AG 70
           N+   L  + RD+ H   S+SS  +          L  +IL+SY  +L+++         
Sbjct: 15  NEINELMIEGRDYAHQFGSASSQETREH-------LAKKILQSYHKSLTIMNYSGELDQV 74

Query: 71  GSGGG-----DEEIPPIIAAVKHRDVSKKRKVMAKWSELVKIPSVSAIGALPDDGFSWRK 130
             GGG     D +  P++       +   +K M +WS  V+I   + +    DDGFSWRK
Sbjct: 75  SQGGGSPKSDDSDQEPLV-------IKSSKKSMPRWSSKVRIAPGAGVDRTLDDGFSWRK 134

Query: 131 YGQKDILGSKFPRGYFRCSHRFAQGCSATKLVQRSDNDPSMYEITYRGKHTCNKPLHSNT 190
           YGQKDILG+KFPRGY+RC++R +QGC ATK VQRSD +  + EI+YRG H+C++  +  T
Sbjct: 135 YGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRGIHSCSQAANVGT 194

Query: 191 --PKQEQNPPQSQQH 192
             P Q   P Q+Q+H
Sbjct: 195 TMPIQNLEPNQTQEH 195

[Close]

BLAST of CmaCh08G001180 vs. ExPASy Swiss-Prot
Match: Q8H0Y8 (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana OX=3702 GN=WRKY41 PE=1 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 1.8e-26
Identity = 80/211 (37.91%), Postives = 116/211 (54.98%), Query Frame = 0


Query: 5   NLIQELNQGRNLAHQLRDHLHPSLSSSSSSSSSSPSSNGILLIDQILRSYENALSVLAGG 64
           +L+ EL  G   A QL+    PSLS+SSS  ++    N   L+  I+ S++ A+ +L G 
Sbjct: 10  SLLNELIHGLKAAKQLQGSSSPSLSASSSYLTTEIKEN---LLHNIVSSFKKAILMLNGS 69

Query: 65  SGGGDEEI----------------PPIIAA---------VKHRDV---SKKRKVMAKWSE 124
           +   +  I                P  I           V+ ++    SKKRK++ KW+E
Sbjct: 70  TTQHNPTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKMLPKWTE 129

Query: 125 LVKIPSVSAIGALPDDGFSWRKYGQKDILGSKFPRGYFRCSHRFAQGCSATKLVQRSDND 184
            V+I     +    DD FSWRKYGQKDILG+KFPR Y+RC+ R  Q C ATK VQRSD D
Sbjct: 130 QVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSDGD 189

Query: 185 PSMYEITYRGKHTCNKPLHSNTPKQEQNPPQ 188
           P+++E+TYRG HTC++ +    P++ +  P+
Sbjct: 190 PTIFEVTYRGTHTCSQGI--PLPEKRETKPK 215

[Close]

BLAST of CmaCh08G001180 vs. ExPASy Swiss-Prot
Match: Q9SKD9 (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana OX=3702 GN=WRKY46 PE=1 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25
Identity = 75/185 (40.54%), Postives = 103/185 (55.68%), Query Frame = 0


Query: 1   MEFVNLIQELNQGRNLAHQLRDHLHPSLSSSSSSSSSSPSSNGILLIDQILRSYENALSV 60
           ME   +I EL  G+ LA++L ++L  + S  S+ +          LI  ILR Y+NA+ +
Sbjct: 3   MEEKLVINELELGKELANRLMNNLKHTSSVDSNKT----------LISDILRIYQNAIFM 62

Query: 61  LAGGSGGGDEEIPPIIAAVKHRDVSKKRKVMAKWSELVKI-PSVSAIGALPDDGFSWRKY 120
           L+        +    I     ++V KKRKV  K +E VK+  +        DDG  WRKY
Sbjct: 63  LSFNQDKNILKRSLEIDGKDSKNVFKKRKVSEKNTEKVKVFVATEQENGSIDDGHCWRKY 122

Query: 121 GQKDILGSKFPRGYFRCSHRFAQGCSATKLVQRSDNDPSMYEITYRGKHTCNKPLHSNTP 180
           GQK+I GSK PR Y+RC+HRF Q C A K VQ+SD DPS++E+ Y G HTCN   +  +P
Sbjct: 123 GQKEIHGSKNPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTCN---NITSP 174

Query: 181 KQEQN 185
           K   N
Sbjct: 183 KTTTN 174

[Close]

BLAST of CmaCh08G001180 vs. ExPASy Swiss-Prot
Match: Q0DFT7 (Transcription factor WRKY19 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.2e-24
Identity = 73/192 (38.02%), Postives = 99/192 (51.56%), Query Frame = 0


Query: 4   VNLIQELNQGRNLAHQLRDHLHPSLSSSSSSSSSSPSSNGILLIDQILRSYENALSVLAG 63
           + L  EL Q R +A +L   + P   ++     +  SS     +D+ +R        LA 
Sbjct: 13  IMLATELAQLRAMARELEAKMDPDRVAARELCRALASS-----VDRSIR--------LAA 72

Query: 64  GSGGGDEEIPPIIAAVKHRDVSKKRKVMAKWSELVKIPSVSAIGALPDDGFSWRKYGQKD 123
                 E  PP           KKRK MAK    V++ SV    +L DDG SWRKYGQKD
Sbjct: 73  SCFPPPEHPPPAAGNAGRDAAFKKRKGMAKVRRQVRVTSVQDTASL-DDGLSWRKYGQKD 132

Query: 124 ILGSKFPRGYFRCSHRFAQGCSATKLVQRSDNDPSMYEITYRGKHTCNK----------- 183
           ILG+K+PR YFRC+HR  QGC+ATK VQR+D DP ++++ Y G HTC +           
Sbjct: 133 ILGAKYPRAYFRCTHRHTQGCNATKQVQRADGDPLLFDVVYLGDHTCGQAAVAAAAQSAP 190

Query: 184 PLHSNTPKQEQN 185
           P H+   +Q Q+
Sbjct: 193 PEHAGQEQQRQS 190

[Close]

BLAST of CmaCh08G001180 vs. TAIR 10
Match: AT4G23810.1 (WRKY family transcription factor )

HSP 1 Score: 128.3 bits (321), Expect = 1.0e-29
Identity = 92/257 (35.80%), Postives = 131/257 (50.97%), Query Frame = 0


Query: 6   LIQELNQGRNLAHQLRDHLH--PSLSSSSSSSSSSPSSNGILLIDQILRSYENALSVLAG 65
           L+ EL  G + A +L+  L   PS SSS SS +++ +    +L+ QI+ SYE +L +L  
Sbjct: 14  LLSELINGFDAAKKLQARLREAPSPSSSFSSPATAVAETNEILVKQIVSSYERSLLLLNW 73

Query: 66  GSGGGDEEIPPIIAAV---------------------------------KHRD----VSK 125
            S    + IP  +  V                                  HR      SK
Sbjct: 74  SSSPSVQLIPTPVTVVPVANPGSVPESPASINGSPRSEEFADGGGSSESHHRQDYIFNSK 133

Query: 126 KRKVMAKWSELVKIPSVSAIGALPDDGFSWRKYGQKDILGSKFPRGYFRCSHRFAQGCSA 185
           KRK++ KWSE V+I     +    DD FSWRKYGQKDILG+KFPR Y+RC+HR  Q C A
Sbjct: 134 KRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWA 193

Query: 186 TKLVQRSDNDPSMYEITYRGKHTCNKPLHSNTPKQEQNPPQSQQHPMPMPPKQEQEEPLQ 224
           TK VQRSD D +++E+TYRG HTC++ +    P      P+ +Q     P   ++ + + 
Sbjct: 194 TKQVQRSDGDATVFEVTYRGTHTCSQAITRTPPLAS---PEKRQDTRVKPAITQKPKDI- 253

[Close]

BLAST of CmaCh08G001180 vs. TAIR 10
Match: AT5G24110.1 (WRKY DNA-binding protein 30 )

HSP 1 Score: 122.1 bits (305), Expect = 7.4e-28
Identity = 75/195 (38.46%), Postives = 109/195 (55.90%), Query Frame = 0


Query: 11  NQGRNLAHQLRDHLHPSLSSSSSSSSSSPSSNGILLIDQILRSYENALSVL-------AG 70
           N+   L  + RD+ H   S+SS  +          L  +IL+SY  +L+++         
Sbjct: 15  NEINELMIEGRDYAHQFGSASSQETREH-------LAKKILQSYHKSLTIMNYSGELDQV 74

Query: 71  GSGGG-----DEEIPPIIAAVKHRDVSKKRKVMAKWSELVKIPSVSAIGALPDDGFSWRK 130
             GGG     D +  P++       +   +K M +WS  V+I   + +    DDGFSWRK
Sbjct: 75  SQGGGSPKSDDSDQEPLV-------IKSSKKSMPRWSSKVRIAPGAGVDRTLDDGFSWRK 134

Query: 131 YGQKDILGSKFPRGYFRCSHRFAQGCSATKLVQRSDNDPSMYEITYRGKHTCNKPLHSNT 190
           YGQKDILG+KFPRGY+RC++R +QGC ATK VQRSD +  + EI+YRG H+C++  +  T
Sbjct: 135 YGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRGIHSCSQAANVGT 194

Query: 191 --PKQEQNPPQSQQH 192
             P Q   P Q+Q+H
Sbjct: 195 TMPIQNLEPNQTQEH 195

[Close]

BLAST of CmaCh08G001180 vs. TAIR 10
Match: AT4G11070.1 (WRKY family transcription factor )

HSP 1 Score: 121.3 bits (303), Expect = 1.3e-27
Identity = 80/211 (37.91%), Postives = 116/211 (54.98%), Query Frame = 0


Query: 5   NLIQELNQGRNLAHQLRDHLHPSLSSSSSSSSSSPSSNGILLIDQILRSYENALSVLAGG 64
           +L+ EL  G   A QL+    PSLS+SSS  ++    N   L+  I+ S++ A+ +L G 
Sbjct: 10  SLLNELIHGLKAAKQLQGSSSPSLSASSSYLTTEIKEN---LLHNIVSSFKKAILMLNGS 69

Query: 65  SGGGDEEI----------------PPIIAA---------VKHRDV---SKKRKVMAKWSE 124
           +   +  I                P  I           V+ ++    SKKRK++ KW+E
Sbjct: 70  TTQHNPTIELAPDPLAHPGKVPGSPASITGNPRSEEFFNVRSKEFNLSSKKRKMLPKWTE 129

Query: 125 LVKIPSVSAIGALPDDGFSWRKYGQKDILGSKFPRGYFRCSHRFAQGCSATKLVQRSDND 184
            V+I     +    DD FSWRKYGQKDILG+KFPR Y+RC+ R  Q C ATK VQRSD D
Sbjct: 130 QVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSDGD 189

Query: 185 PSMYEITYRGKHTCNKPLHSNTPKQEQNPPQ 188
           P+++E+TYRG HTC++ +    P++ +  P+
Sbjct: 190 PTIFEVTYRGTHTCSQGI--PLPEKRETKPK 215

[Close]

BLAST of CmaCh08G001180 vs. TAIR 10
Match: AT2G46400.1 (WRKY DNA-binding protein 46 )

HSP 1 Score: 118.6 bits (296), Expect = 8.2e-27
Identity = 75/185 (40.54%), Postives = 103/185 (55.68%), Query Frame = 0


Query: 1   MEFVNLIQELNQGRNLAHQLRDHLHPSLSSSSSSSSSSPSSNGILLIDQILRSYENALSV 60
           ME   +I EL  G+ LA++L ++L  + S  S+ +          LI  ILR Y+NA+ +
Sbjct: 3   MEEKLVINELELGKELANRLMNNLKHTSSVDSNKT----------LISDILRIYQNAIFM 62

Query: 61  LAGGSGGGDEEIPPIIAAVKHRDVSKKRKVMAKWSELVKI-PSVSAIGALPDDGFSWRKY 120
           L+        +    I     ++V KKRKV  K +E VK+  +        DDG  WRKY
Sbjct: 63  LSFNQDKNILKRSLEIDGKDSKNVFKKRKVSEKNTEKVKVFVATEQENGSIDDGHCWRKY 122

Query: 121 GQKDILGSKFPRGYFRCSHRFAQGCSATKLVQRSDNDPSMYEITYRGKHTCNKPLHSNTP 180
           GQK+I GSK PR Y+RC+HRF Q C A K VQ+SD DPS++E+ Y G HTCN   +  +P
Sbjct: 123 GQKEIHGSKNPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTCN---NITSP 174

Query: 181 KQEQN 185
           K   N
Sbjct: 183 KTTTN 174

[Close]

BLAST of CmaCh08G001180 vs. TAIR 10
Match: AT4G11070.2 (WRKY family transcription factor )

HSP 1 Score: 116.3 bits (290), Expect = 4.1e-26
Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 0


Query: 85  SKKRKVMAKWSELVKIPSVSAIGALPDDGFSWRKYGQKDILGSKFPRGYFRCSHRFAQGC 144
           SKKRK++ KW+E V+I     +    DD FSWRKYGQKDILG+KFPR Y+RC+ R  Q C
Sbjct: 83  SKKRKMLPKWTEQVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYC 142

Query: 145 SATKLVQRSDNDPSMYEITYRGKHTCNKPLHSNTPKQEQNPPQ 188
            ATK VQRSD DP+++E+TYRG HTC++ +    P++ +  P+
Sbjct: 143 WATKQVQRSDGDPTIFEVTYRGTHTCSQGI--PLPEKRETKPK 183

The following BLAST results are available for this feature:

BLAST of CmaCh08G001180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SUP6	1.5e-28	35.80	Probable WRKY transcription factor 53 OS=Arabidopsis thaliana OX=3702 GN=WRKY53 ...	[more]
Q9FL62	1.0e-26	38.46	Probable WRKY transcription factor 30 OS=Arabidopsis thaliana OX=3702 GN=WRKY30 ...	[more]
Q8H0Y8	1.8e-26	37.91	Probable WRKY transcription factor 41 OS=Arabidopsis thaliana OX=3702 GN=WRKY41 ...	[more]
Q9SKD9	1.2e-25	40.54	Probable WRKY transcription factor 46 OS=Arabidopsis thaliana OX=3702 GN=WRKY46 ...	[more]
Q0DFT7	2.2e-24	38.02	Transcription factor WRKY19 OS=Oryza sativa subsp. japonica OX=39947 GN=WRKY19 P...	[more]

BLAST of CmaCh08G001180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23810.1	1.0e-29	35.80	WRKY family transcription factor	[more]
AT5G24110.1	7.4e-28	38.46	WRKY DNA-binding protein 30	[more]
AT4G11070.1	1.3e-27	37.91	WRKY family transcription factor	[more]
AT2G46400.1	8.2e-27	40.54	WRKY DNA-binding protein 46	[more]
AT4G11070.2	4.1e-26	53.40	WRKY family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003657	WRKY domain	SMART	SM00774	WRKY_cls	coord: 110..172 e-value: 4.9E-41 score: 152.3
IPR003657	WRKY domain	PFAM	PF03106	WRKY	coord: 111..171 e-value: 1.2E-26 score: 92.7
IPR003657	WRKY domain	PROSITE	PS50811	WRKY	coord: 105..173 score: 23.617107
IPR036576	WRKY domain superfamily	GENE3D	2.20.25.80	WRKY domain	coord: 100..174 e-value: 2.1E-28 score: 99.9
IPR036576	WRKY domain superfamily	SUPERFAMILY	118290	WRKY DNA-binding domain	coord: 109..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..188
None	No IPR available	PANTHER	PTHR32096:SF102	WRKY TRANSCRIPTION FACTOR 46-RELATED	coord: 2..282
IPR044810	WRKY transcription factor, plant	PANTHER	PTHR32096	WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED	coord: 2..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G001180.1	CmaCh08G001180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048583	regulation of response to stimulus
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0043565	sequence-specific DNA binding