CmaCh08G001050 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G001050
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	CMP-sialic acid transporter 1
Location	Cma_Chr08: 558706 .. 562386 (-)
RNA-Seq Expression	CmaCh08G001050
Synteny	CmaCh08G001050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCCGATCTCAACTTCATCTACCCGCGTACTCCGCCTCTCCTCCTCCGGATGCGTTTTTCCTTCTTCACCTCATCTCGATTTCTCGCCATTACGCTCTGGAATTCTTCGCTGTCGCCAAGCCCTAGATTTCTCTCATCTCTGATCTCTGTTGCTGCGCAGATTGCTCGAAATGCAGTGGTACATGGTCGCTTTGCTTCTTACCGTACTTACCAGTTCTCAGGTTTGTGATTCCAAATCAGTACTCTCTCGTTTCACTCAATAGAATTTGAAACTCGGCCTCTTAATTTCAATCACCATTTCGGACAACATGGATGCAGAATGTTCTGTTAGTTGTATAGAAATTTTGATTGTGTTGTTAAGCTATGGTGTAGTAGCTTCGATTGATTTAGTTACTTGATGCAATGAGCTATCGTCACAATTCTAATTAGAATCTGGTCTCTTTTTTCATTTTTGATGCTTTAGAGACTGATTAACGAATCGTTTTTTTTTTTTTTTTACCTTCTATGTATGCAGGGAATTTTAACTACGTTATCACAAAGTAATGGTAGATATGAATATGACTATGCGACCGTCCCCTTTCTTGCAGAAGTTTTTAAGGTGCTTTGCGTTCCTTGAAGCAATGTGATTTTCTTTACTTTTTGTATCATTAATCTATATCTGAATACATATTTGTAGCTTTTAGTGTCAAGTATGTTTCTGTGGAAGGAGAGCCAGAAATCTCCTCCTCCGAAAATGACGACTGATTGGAGGACTGTTCGTTTATATCCGATACCTTCAATTATATATCTCATCCACAACAATGTTCAATTTGCTACCCTGACGTATGTAGATACATCCACATACCAGATAATGGGGAATTTGAAGATTGTCACGACTGGAATTTTGTTCAGGTGATTCTCTACCAAATACAAATGACTGTTACATCAATGCATATCATTTCTTGGATTCTTATTCTCACATAAGAGCAGATATTTCTATTTCCTGATTTAGGCTAGTCCTAAAGAGGAAGCTATCCAACTTGCAGTGGATGGCTATTATTCTGTTGGCAGTTGGGACGACCACAAGCCAGGTATTGCATTTGAAAAGAAAGAACTTCTACTACTTTTATTCGAATCTGGCTTATGGACTTGTTACTAATTATGGGAATTTCATGGAAATAAAATACTCTTGGATATGTCTTCGGTGATCAGTAAGATAGATGAGAAATGGAGGGAAGAGTGATAAGAATAGTCATATTACAGATAATTATGATTTCCTGACTAAAGGCTAGACCTACCTTGGCATCACTGATAGTGGAAGGGTGGAAAAACTAGTTGTGAACACGGACTGAAATGGATGTAATTCCTAATATGAAGAGCAAGAAAGAAATAAGGCTATAGGGCCCAGCAACATTGCTGTAAACCCAGGAAGGGAACAAGGCTTTTTCGGGGACTAGCCCGCTTCCCATTACTCAACGAAGGCTTCCCATTGTCCGGTTCTTTCTGCATGAGCAAAAAAATTGTTTCTCTAATTTGGCTGCCAGCCCATATTATATACAAGAGTGCTCAGCTAACTAACAGAGAGTTAATATTGATAGAGGAATGATGTGCCTGAACCTAACAACCTAACAACAGAATTCGAAAAGTCATAACAAGTCAACTTTGCCTATTTAGTTAGTATGTGCTGCAGCTGCGTAGAATGTTTTTCAGGTTGTAGTATGTTTTAAATCAGAATCTGTTTAGTTTAGTTATTTTATGTAGTGCATATAGGAAATTGAGGATCCAATAGTTATAGAATTGTTGGCTTCTTAGCCTCCTATGCTTTCTCTGCGGTCTTCATTTAGTCTCCCTTTTTCCAAATTAATAGTTAATTATTGATATTTTCTATAAATTTTAATGGGTTTTTTTTTTTCTTTTTGTAATTTTTCATTTATTCAGGTAAAAGGATGTGGAGAGTCTTCATGTGAATCTCTTCTCTCATCACCAATTGAAGGATACATGTTAGGGATTCTTTCTGCTTGTCTTTCAGCATTAGCAGGCATTTATACAGAATTCTTGATGAAGAAAAATAATGATTCTTTATACTGGCAGAATGTTCAGTTATACACGTAGGTATCCATTCTTTTATGTTTATCAGGTTGCTTACTCTTAGTTGTCTTTTAATCTGCTGTTTTATTTTCAAAATGAAGAATATGATTTTCTTCCAAGAATTAAGTTTATGTTCATTTTTTCTCATAAGCGGATTTAGAAGACCAATGGCTGCTTGTAGTGCTTAAAGAAGTCATCAGTTTTTCAACTTTATTCGTGTGATTAGAATGCATTAACATTAGAATCATTTGGATTGTGGTCTTCCAGGTTTGGGTCTATTTTTAATATGGCACGACTTGTCGTGGATGATTTTAGAGGTGGATTTGAGAATGGTCCATGGTGGCAACGTCTATTCAACGGATACAGTATTACTACCTGGATGGTGGTTATTAATCTTGGGTCTACTGGGCTTTTGGTTTCATGGCTGATGAAATATGCCGATAATATTGTTAAGGTAACTGTTTTATCTTCGATAAATACTTCGCTAGCCATCATTATGCTTCATATCTTGTAATACTCATGGTTCGTTTTGTTCAATAATCTAGGTGTATTCTACTTCAATGGCAATGCTTCTGACGACTGTCTTATCTGTACATCTGTTTAACTTCAGACCGACACTGCAGGTGAACTCAGATGCCTATGAAACTGGTTTATAAATTTCCTTTGTTTCACGCTCTTCTTACCATATAGCTGCTACATCTTGAGCCATCATGGTCATAGTGTAGTTATCTCATGTTTGATTTAAGGTAAATTATTACGCAAATTGCAAAAAAGTCTTCAAATTTGTGACTGCGTGTATGTTTCCCACAAAAAAAAAAAAAAAAGAAAGAAAAGACTGCATGTGGGGCCAACTTACCTCAGCATTTTTTGTTTTGTGCTACTTTTTAGAGTTCAATCCTCCCATACCAAAAATGGCTTTTACGTCATTTTTAACCTTTAATACTACTGGCCTTTGTTTTATAAAACAAGAGGAGGCGTGTTAGGTGATTCTCTTAGTATCTTCTTCTAAGAGAGATCGTAAGTAGACAACAGTCTCTACCTTCGTAAATTTCATCCTATATAGCAATGAAAGTTATTGACTTAATGCTGGATCATGGAACACCCATATACACGGTACTCGAGAACTTTCTAACAAAAACAGCATATAGAGATTTTCTTCCTCAATTTGATAGCCTTTGTTTTTTTTTTTTTTGTTTATGAAACAGCTTTTCCTGGGGATTATAGTGTGCATGATGTCTCTGCACATGTATTTTGCTCCTCCTCAGATGCTTGTGGATTTGCCTTCTCCAACGTTAAAATCAGACCCAGAGAGTCTGGCAGAGGCTTCCAGTGATCGTAGATCAGATTCTTGATTCGTTCTAATCTCGAAGCAGTTATTATTTGGTGAGTCTGTATTGATTTACAAAGACCACCATGAAAGTTGTGAACAACTGAGCTTGCCATATTATAGCGCAAGTAATATAAAATGATGTGTAGAGCCCTAGAATTTAGGAACTTATTACTACTTTTTTGCTCAAACTTTCACACCATGGATTGGATGGATCTGTGTTTGTATTTTATCACCAACATTGTTGAAGGATGATGCAAACATTCATTTTAGAAATTCAAGGGAG

mRNA sequence

ATCCCGATCTCAACTTCATCTACCCGCGTACTCCGCCTCTCCTCCTCCGGATGCGTTTTTCCTTCTTCACCTCATCTCGATTTCTCGCCATTACGCTCTGGAATTCTTCGCTGTCGCCAAGCCCTAGATTTCTCTCATCTCTGATCTCTGTTGCTGCGCAGATTGCTCGAAATGCAGTGGTACATGGTCGCTTTGCTTCTTACCGTACTTACCAGTTCTCAGGGAATTTTAACTACGTTATCACAAAGTAATGGTAGATATGAATATGACTATGCGACCGTCCCCTTTCTTGCAGAAGTTTTTAAGCTTTTAGTGTCAAGTATGTTTCTGTGGAAGGAGAGCCAGAAATCTCCTCCTCCGAAAATGACGACTGATTGGAGGACTGTTCGTTTATATCCGATACCTTCAATTATATATCTCATCCACAACAATGTTCAATTTGCTACCCTGACGTATGTAGATACATCCACATACCAGATAATGGGGAATTTGAAGATTGTCACGACTGGAATTTTGTTCAGGCTAGTCCTAAAGAGGAAGCTATCCAACTTGCAGTGGATGGCTATTATTCTGTTGGCAGTTGGGACGACCACAAGCCAGGTAAAAGGATGTGGAGAGTCTTCATGTGAATCTCTTCTCTCATCACCAATTGAAGGATACATGTTAGGGATTCTTTCTGCTTGTCTTTCAGCATTAGCAGGCATTTATACAGAATTCTTGATGAAGAAAAATAATGATTCTTTATACTGGCAGAATGTTCAGTTATACACGTTTGGGTCTATTTTTAATATGGCACGACTTGTCGTGGATGATTTTAGAGGTGGATTTGAGAATGGTCCATGGTGGCAACGTCTATTCAACGGATACAGTATTACTACCTGGATGGTGGTTATTAATCTTGGGTCTACTGGGCTTTTGGTTTCATGGCTGATGAAATATGCCGATAATATTGTTAAGGTGTATTCTACTTCAATGGCAATGCTTCTGACGACTGTCTTATCTGTACATCTGTTTAACTTCAGACCGACACTGCAGCTTTTCCTGGGGATTATAGTGTGCATGATGTCTCTGCACATGTATTTTGCTCCTCCTCAGATGCTTGTGGATTTGCCTTCTCCAACGTTAAAATCAGACCCAGAGAGTCTGGCAGAGGCTTCCAGTGATCGTAGATCAGATTCTTGATTCGTTCTAATCTCGAAGCAGTTATTATTTGGTGAGTCTGTATTGATTTACAAAGACCACCATGAAAGTTGTGAACAACTGAGCTTGCCATATTATAGCGCAAGTAATATAAAATGATGTGTAGAGCCCTAGAATTTAGGAACTTATTACTACTTTTTTGCTCAAACTTTCACACCATGGATTGGATGGATCTGTGTTTGTATTTTATCACCAACATTGTTGAAGGATGATGCAAACATTCATTTTAGAAATTCAAGGGAG

Coding sequence (CDS)

ATGCAGTGGTACATGGTCGCTTTGCTTCTTACCGTACTTACCAGTTCTCAGGGAATTTTAACTACGTTATCACAAAGTAATGGTAGATATGAATATGACTATGCGACCGTCCCCTTTCTTGCAGAAGTTTTTAAGCTTTTAGTGTCAAGTATGTTTCTGTGGAAGGAGAGCCAGAAATCTCCTCCTCCGAAAATGACGACTGATTGGAGGACTGTTCGTTTATATCCGATACCTTCAATTATATATCTCATCCACAACAATGTTCAATTTGCTACCCTGACGTATGTAGATACATCCACATACCAGATAATGGGGAATTTGAAGATTGTCACGACTGGAATTTTGTTCAGGCTAGTCCTAAAGAGGAAGCTATCCAACTTGCAGTGGATGGCTATTATTCTGTTGGCAGTTGGGACGACCACAAGCCAGGTAAAAGGATGTGGAGAGTCTTCATGTGAATCTCTTCTCTCATCACCAATTGAAGGATACATGTTAGGGATTCTTTCTGCTTGTCTTTCAGCATTAGCAGGCATTTATACAGAATTCTTGATGAAGAAAAATAATGATTCTTTATACTGGCAGAATGTTCAGTTATACACGTTTGGGTCTATTTTTAATATGGCACGACTTGTCGTGGATGATTTTAGAGGTGGATTTGAGAATGGTCCATGGTGGCAACGTCTATTCAACGGATACAGTATTACTACCTGGATGGTGGTTATTAATCTTGGGTCTACTGGGCTTTTGGTTTCATGGCTGATGAAATATGCCGATAATATTGTTAAGGTGTATTCTACTTCAATGGCAATGCTTCTGACGACTGTCTTATCTGTACATCTGTTTAACTTCAGACCGACACTGCAGCTTTTCCTGGGGATTATAGTGTGCATGATGTCTCTGCACATGTATTTTGCTCCTCCTCAGATGCTTGTGGATTTGCCTTCTCCAACGTTAAAATCAGACCCAGAGAGTCTGGCAGAGGCTTCCAGTGATCGTAGATCAGATTCTTGA

Protein sequence

MQWYMVALLLTVLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFLWKESQKSPPPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVLKRKLSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYTEFLMKKNNDSLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVVINLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSLHMYFAPPQMLVDLPSPTLKSDPESLAEASSDRRSDS

Homology

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BLAST of CmaCh08G001050 vs. ExPASy Swiss-Prot
Match: Q654D9 (CMP-sialic acid transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CSTLP1 PE=2 SV=1)

HSP 1 Score: 524.6 bits (1350), Expect = 8.1e-148
Identity = 257/314 (81.85%), Postives = 286/314 (91.08%), Query Frame = 0


Query: 1   MQWYMVALLLTVLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFLWKESQKS 60
           MQWY+VA LLTVLTSSQGILTTLSQSNG+Y+YDYAT+PFLAE+FKL  SS FLWKE Q S
Sbjct: 1   MQWYLVAALLTVLTSSQGILTTLSQSNGKYKYDYATIPFLAELFKLSFSSFFLWKECQSS 60

Query: 61  PPPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVL 120
            PP+MT +WR++RLY +PS+IYLIHNNVQFATLTYVD STYQIMGNLKIVTTGILFRLVL
Sbjct: 61  SPPRMTKEWRSIRLYLVPSVIYLIHNNVQFATLTYVDPSTYQIMGNLKIVTTGILFRLVL 120

Query: 121 KRKLSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYT 180
           KRKLSNLQWMA++LLAVGTTTSQVKGCG++ C+SL S+P +GYMLGILSACLSALAG+YT
Sbjct: 121 KRKLSNLQWMAVVLLAVGTTTSQVKGCGDAPCDSLFSAPFQGYMLGILSACLSALAGVYT 180

Query: 181 EFLMKKNNDSLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVV 240
           E+LMKKNNDSLYWQNVQLYTFG IFNM  L+  DF+ GFE GPWWQRLFNGYSITTWMVV
Sbjct: 181 EYLMKKNNDSLYWQNVQLYTFGVIFNMGWLIYGDFKAGFERGPWWQRLFNGYSITTWMVV 240

Query: 241 INLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSL 300
            NLGSTGLLVSWLMKY+DNIVKVYSTSMAMLLT VLSV+LFN R TLQLFLGI++C++SL
Sbjct: 241 FNLGSTGLLVSWLMKYSDNIVKVYSTSMAMLLTMVLSVYLFNVRATLQLFLGIVICIISL 300

Query: 301 HMYFAPPQMLVDLP 315
            MYF P  MLV+LP
Sbjct: 301 QMYFMPVNMLVELP 314

[Close]

BLAST of CmaCh08G001050 vs. ExPASy Swiss-Prot
Match: B8B350 (CMP-sialic acid transporter 1 OS=Oryza sativa subsp. indica OX=39946 GN=CSTLP1 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 2.3e-147
Identity = 256/314 (81.53%), Postives = 285/314 (90.76%), Query Frame = 0


Query: 1   MQWYMVALLLTVLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFLWKESQKS 60
           MQWY+VA LLTVLTSSQGILTTLSQSNG+Y+YDYAT+PFLAE+FKL  SS FLWKE Q S
Sbjct: 1   MQWYLVAALLTVLTSSQGILTTLSQSNGKYKYDYATIPFLAELFKLSFSSFFLWKECQSS 60

Query: 61  PPPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVL 120
            PP+MT +WR++RLY +PS+IYLIHNNVQFATLTYVD STYQIMGNLKIVTTGILFRLVL
Sbjct: 61  SPPRMTKEWRSIRLYLVPSVIYLIHNNVQFATLTYVDPSTYQIMGNLKIVTTGILFRLVL 120

Query: 121 KRKLSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYT 180
           KRKLSNLQWMA++LLAVGTTTSQVKGCG++ C+SL S+P +GYMLGILSACLSALAG+YT
Sbjct: 121 KRKLSNLQWMAVVLLAVGTTTSQVKGCGDAPCDSLFSAPFQGYMLGILSACLSALAGVYT 180

Query: 181 EFLMKKNNDSLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVV 240
           E+LMKKNNDSLYWQNVQLYTFG IFNM  L+  DF+ GFE GPWWQRLFNGYSITTWMVV
Sbjct: 181 EYLMKKNNDSLYWQNVQLYTFGVIFNMGWLIYGDFKAGFERGPWWQRLFNGYSITTWMVV 240

Query: 241 INLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSL 300
            NLGSTGLLVSWLMKY+DNIVKVYSTSM MLLT VLSV+LFN R TLQLFLGI++C++SL
Sbjct: 241 FNLGSTGLLVSWLMKYSDNIVKVYSTSMGMLLTMVLSVYLFNVRATLQLFLGIVICIISL 300

Query: 301 HMYFAPPQMLVDLP 315
            MYF P  MLV+LP
Sbjct: 301 QMYFMPVNMLVELP 314

[Close]

BLAST of CmaCh08G001050 vs. ExPASy Swiss-Prot
Match: Q8LGE9 (CMP-sialic acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=At5g41760 PE=2 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 8.4e-145
Identity = 257/336 (76.49%), Postives = 303/336 (90.18%), Query Frame = 0


Query: 3   WYMVALLLTVLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFLWKE--SQKS 62
           WY VA+LLT+LTSSQGILTTLSQS+G Y+YDYATVPFLAEVFKL++S +FLW+E  +  S
Sbjct: 6   WYFVAVLLTILTSSQGILTTLSQSDGGYKYDYATVPFLAEVFKLIISGLFLWREMRTSSS 65

Query: 63  PPPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVL 122
              ++TTDW++VRL+ IPS+IYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRL L
Sbjct: 66  TTSRITTDWKSVRLFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 125

Query: 123 KRKLSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYT 182
           KRKLS LQWMAI LLAVGTTTSQVKGCGE+SC+SL ++PI+GY+LGILSA LSALAGIYT
Sbjct: 126 KRKLSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALAGIYT 185

Query: 183 EFLMKKNNDSLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVV 242
           EFLMK+NND+LYWQN+QLYTFGS+FN+ARL+ DDFR GFE GPWWQR+F+GYSITTW+VV
Sbjct: 186 EFLMKRNNDTLYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVV 245

Query: 243 INLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSL 302
           +NLGSTGLLVSWLMKYADNIVKVYSTSMAMLLT V S++LF+F+PTLQLFLGI++C+MSL
Sbjct: 246 LNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSL 305

Query: 303 HMYFAPPQMLVDLPSPTLKSDPESLAEASSDRRSDS 337
           HMYFAPP  LVDLP  T ++  ++L +   + ++DS
Sbjct: 306 HMYFAPPHTLVDLP-VTNEAHAKTLKQVVVEEKTDS 340

[Close]

BLAST of CmaCh08G001050 vs. ExPASy Swiss-Prot
Match: B8B7Q4 (CMP-sialic acid transporter 2 OS=Oryza sativa subsp. indica OX=39946 GN=CSTLP2 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 5.4e-59
Identity = 130/303 (42.90%), Postives = 192/303 (63.37%), Query Frame = 0


Query: 5   MVALLLTVLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFL---WKESQKSP 64
           +V L LT+LTSSQ IL   S+  G+YEY   T  F  E  K L+S + L   W     + 
Sbjct: 54  IVTLALTLLTSSQAILIVWSKRAGKYEYSVTTANFSVEALKCLLSLIALYRTWNSQGVTE 113

Query: 65  PPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVLK 124
             +++T +  V +YPIP+I+Y++ N +Q+    YVD   YQI+ NL I++TG+L+R++LK
Sbjct: 114 DNRLSTSFDEVSVYPIPAILYMVKNLLQYYIFAYVDAPAYQILKNLNIISTGVLYRIILK 173

Query: 125 RKLSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYTE 184
           +KLS +QW A ILL  G TT+Q+      S + +L +PI+G+++ I+ A LS  AG+YTE
Sbjct: 174 KKLSEIQWAAFILLCAGCTTAQL----NPSSDHVLQTPIQGWVMAIVMALLSGFAGVYTE 233

Query: 185 FLMKKN-NDSLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVV 244
            ++KK  + ++  QN  LY FG +FN+  + V DF      G      F+GYS  T +++
Sbjct: 234 AIIKKRPSRNINVQNFWLYIFGMLFNLVAICVQDFDAVMNKG-----FFHGYSFITVLMI 293

Query: 245 INLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSL 304
           +N   +G+ VS +MKYADNIVKVYSTS+AMLLT V+SV LF F  +L  FLG  V  +S+
Sbjct: 294 LNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSVSV 347

[Close]

BLAST of CmaCh08G001050 vs. ExPASy Swiss-Prot
Match: Q6ZL17 (CMP-sialic acid transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CSTLP2 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 5.4e-59
Identity = 130/303 (42.90%), Postives = 192/303 (63.37%), Query Frame = 0


Query: 5   MVALLLTVLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFL---WKESQKSP 64
           +V L LT+LTSSQ IL   S+  G+YEY   T  F  E  K L+S + L   W     + 
Sbjct: 54  IVTLALTLLTSSQAILIVWSKRAGKYEYSVTTANFSVEALKCLLSLIALYRTWNSQGVTE 113

Query: 65  PPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVLK 124
             +++T +  V +YPIP+I+Y++ N +Q+    YVD   YQI+ NL I++TG+L+R++LK
Sbjct: 114 DNRLSTSFDEVSVYPIPAILYMVKNLLQYYIFAYVDAPAYQILKNLNIISTGVLYRIILK 173

Query: 125 RKLSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYTE 184
           +KLS +QW A ILL  G TT+Q+      S + +L +PI+G+++ I+ A LS  AG+YTE
Sbjct: 174 KKLSEIQWAAFILLCAGCTTAQL----NPSSDHVLQTPIQGWVMAIVMALLSGFAGVYTE 233

Query: 185 FLMKKN-NDSLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVV 244
            ++KK  + ++  QN  LY FG +FN+  + V DF      G      F+GYS  T +++
Sbjct: 234 AIIKKRPSRNINVQNFWLYIFGMLFNLVAICVQDFDAVMNKG-----FFHGYSFITVLMI 293

Query: 245 INLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSL 304
           +N   +G+ VS +MKYADNIVKVYSTS+AMLLT V+SV LF F  +L  FLG  V  +S+
Sbjct: 294 LNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFGFHLSLAFFLGSTVVSVSV 347

[Close]

BLAST of CmaCh08G001050 vs. TAIR 10
Match: AT5G41760.1 (Nucleotide-sugar transporter family protein )

HSP 1 Score: 514.6 bits (1324), Expect = 5.9e-146
Identity = 257/336 (76.49%), Postives = 303/336 (90.18%), Query Frame = 0


Query: 3   WYMVALLLTVLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFLWKE--SQKS 62
           WY VA+LLT+LTSSQGILTTLSQS+G Y+YDYATVPFLAEVFKL++S +FLW+E  +  S
Sbjct: 6   WYFVAVLLTILTSSQGILTTLSQSDGGYKYDYATVPFLAEVFKLIISGLFLWREMRTSSS 65

Query: 63  PPPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVL 122
              ++TTDW++VRL+ IPS+IYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRL L
Sbjct: 66  TTSRITTDWKSVRLFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 125

Query: 123 KRKLSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYT 182
           KRKLS LQWMAI LLAVGTTTSQVKGCGE+SC+SL ++PI+GY+LGILSA LSALAGIYT
Sbjct: 126 KRKLSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALAGIYT 185

Query: 183 EFLMKKNNDSLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVV 242
           EFLMK+NND+LYWQN+QLYTFGS+FN+ARL+ DDFR GFE GPWWQR+F+GYSITTW+VV
Sbjct: 186 EFLMKRNNDTLYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVV 245

Query: 243 INLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSL 302
           +NLGSTGLLVSWLMKYADNIVKVYSTSMAMLLT V S++LF+F+PTLQLFLGI++C+MSL
Sbjct: 246 LNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSL 305

Query: 303 HMYFAPPQMLVDLPSPTLKSDPESLAEASSDRRSDS 337
           HMYFAPP  LVDLP  T ++  ++L +   + ++DS
Sbjct: 306 HMYFAPPHTLVDLP-VTNEAHAKTLKQVVVEEKTDS 340

[Close]

BLAST of CmaCh08G001050 vs. TAIR 10
Match: AT5G41760.2 (Nucleotide-sugar transporter family protein )

HSP 1 Score: 514.6 bits (1324), Expect = 5.9e-146
Identity = 257/336 (76.49%), Postives = 303/336 (90.18%), Query Frame = 0


Query: 3   WYMVALLLTVLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFLWKE--SQKS 62
           WY VA+LLT+LTSSQGILTTLSQS+G Y+YDYATVPFLAEVFKL++S +FLW+E  +  S
Sbjct: 6   WYFVAVLLTILTSSQGILTTLSQSDGGYKYDYATVPFLAEVFKLIISGLFLWREMRTSSS 65

Query: 63  PPPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVL 122
              ++TTDW++VRL+ IPS+IYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRL L
Sbjct: 66  TTSRITTDWKSVRLFVIPSLIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLFL 125

Query: 123 KRKLSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYT 182
           KRKLS LQWMAI LLAVGTTTSQVKGCGE+SC+SL ++PI+GY+LGILSA LSALAGIYT
Sbjct: 126 KRKLSKLQWMAIGLLAVGTTTSQVKGCGEASCDSLFTAPIQGYLLGILSAGLSALAGIYT 185

Query: 183 EFLMKKNNDSLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVV 242
           EFLMK+NND+LYWQN+QLYTFGS+FN+ARL+ DDFR GFE GPWWQR+F+GYSITTW+VV
Sbjct: 186 EFLMKRNNDTLYWQNLQLYTFGSLFNVARLIADDFRHGFEKGPWWQRIFDGYSITTWLVV 245

Query: 243 INLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSL 302
           +NLGSTGLLVSWLMKYADNIVKVYSTSMAMLLT V S++LF+F+PTLQLFLGI++C+MSL
Sbjct: 246 LNLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTMVASIYLFSFKPTLQLFLGIVICIMSL 305

Query: 303 HMYFAPPQMLVDLPSPTLKSDPESLAEASSDRRSDS 337
           HMYFAPP  LVDLP  T ++  ++L +   + ++DS
Sbjct: 306 HMYFAPPHTLVDLP-VTNEAHAKTLKQVVVEEKTDS 340

[Close]

BLAST of CmaCh08G001050 vs. TAIR 10
Match: AT4G35335.1 (Nucleotide-sugar transporter family protein )

HSP 1 Score: 221.1 bits (562), Expect = 1.4e-57
Identity = 128/305 (41.97%), Postives = 188/305 (61.64%), Query Frame = 0


Query: 5   MVALLLTVLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFL---WKESQKSP 64
           +V   LT+LTSSQ IL   S+  G+YEY   T  FL    K  +S + L   WK    + 
Sbjct: 53  VVTCALTILTSSQAILIVWSKRAGKYEYSVTTANFLVGTLKCALSLLALTRIWKNEGVTD 112

Query: 65  PPKMTTDWRTVRLYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVLK 124
             +++T +  V+++PIP+ +YL  N +Q+    YVD   YQI+ NL I++TG+L+R++LK
Sbjct: 113 DNRLSTTFDEVKVFPIPAALYLFKNLLQYYIFAYVDAPGYQILKNLNIISTGVLYRIILK 172

Query: 125 RKLSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYTE 184
           RKLS +QW   ILL  G TT+Q+     S+ + +L + + G+ + I+ A LS  AG+YTE
Sbjct: 173 RKLSEIQWAGFILLCCGCTTAQL----NSNSDRVLQTSLPGWTMAIVMALLSGFAGVYTE 232

Query: 185 FLMKKN-NDSLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVV 244
            ++KK  + ++  QN  LY FG  FN   +V+ DF      G      F+GYS  T +++
Sbjct: 233 AIIKKRPSRNINVQNFWLYVFGMAFNAVAIVIQDFDAVANKG-----FFHGYSFITLLMI 292

Query: 245 INLGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSL 304
           +N   +G+ VS +MKYADNIVKVYSTS+AMLLT V+SV LFNF  +L  FLG  V  +S+
Sbjct: 293 LNHALSGIAVSMVMKYADNIVKVYSTSVAMLLTAVVSVFLFNFHLSLAFFLGSTVVSVSV 348

Query: 305 HMYFA 306
           +++ A
Sbjct: 353 YLHSA 348

[Close]

BLAST of CmaCh08G001050 vs. TAIR 10
Match: AT3G59360.1 (UDP-galactose transporter 6 )

HSP 1 Score: 140.2 bits (352), Expect = 3.0e-33
Identity = 83/304 (27.30%), Postives = 168/304 (55.26%), Query Frame = 0


Query: 12  VLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFLWKESQ-----KSPPPKMT 71
           +L   Q +L  +S+ +G++ +   +V FL E+ K++ + + L  +++     + P   ++
Sbjct: 51  MLVGLQPVLVYMSKVDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVS 110

Query: 72  TDWRTVR---LYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVLKRK 131
           T  +  R   L  +P+++Y I+N ++F    Y + +T +++ NLK++   +L ++V+KR+
Sbjct: 111 TFVQAARNNVLLAVPALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRR 170

Query: 132 LSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYTEFL 191
            S +QW A+ LL +G + +Q++   E +    +      Y+  ++   + ++A ++ E+ 
Sbjct: 171 FSIIQWEALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYA 230

Query: 192 MKKNND-SLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVVIN 251
           +K   D S+Y QN+ LY +G+IFN   ++          GP    +  G+S  T  +++N
Sbjct: 231 LKSQYDTSIYLQNLFLYGYGAIFNFLGIL----GTVIYKGPGSFDILQGHSRATMFLILN 290

Query: 252 LGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSLHM 307
             + G+L S+  KYAD I+K YS+++A + T + S  LF    T+   LGI +  +S+H 
Sbjct: 291 NAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQ 350

[Close]

BLAST of CmaCh08G001050 vs. TAIR 10
Match: AT3G59360.2 (UDP-galactose transporter 6 )

HSP 1 Score: 140.2 bits (352), Expect = 3.0e-33
Identity = 83/304 (27.30%), Postives = 168/304 (55.26%), Query Frame = 0


Query: 12  VLTSSQGILTTLSQSNGRYEYDYATVPFLAEVFKLLVSSMFLWKESQ-----KSPPPKMT 71
           +L   Q +L  +S+ +G++ +   +V FL E+ K++ + + L  +++     + P   ++
Sbjct: 51  MLVGLQPVLVYMSKVDGKFNFSPISVNFLTEIAKVIFAIVMLLIQARHQKVGEKPLLSVS 110

Query: 72  TDWRTVR---LYPIPSIIYLIHNNVQFATLTYVDTSTYQIMGNLKIVTTGILFRLVLKRK 131
           T  +  R   L  +P+++Y I+N ++F    Y + +T +++ NLK++   +L ++V+KR+
Sbjct: 111 TFVQAARNNVLLAVPALLYAINNYLKFTMQLYFNPATVKMLSNLKVLVIAVLLKMVMKRR 170

Query: 132 LSNLQWMAIILLAVGTTTSQVKGCGESSCESLLSSPIEGYMLGILSACLSALAGIYTEFL 191
            S +QW A+ LL +G + +Q++   E +    +      Y+  ++   + ++A ++ E+ 
Sbjct: 171 FSIIQWEALALLLIGISVNQLRSLPEGATAIGIPLATGAYVCTVIFVTVPSMASVFNEYA 230

Query: 192 MKKNND-SLYWQNVQLYTFGSIFNMARLVVDDFRGGFENGPWWQRLFNGYSITTWMVVIN 251
           +K   D S+Y QN+ LY +G+IFN   ++          GP    +  G+S  T  +++N
Sbjct: 231 LKSQYDTSIYLQNLFLYGYGAIFNFLGIL----GTVIYKGPGSFDILQGHSRATMFLILN 290

Query: 252 LGSTGLLVSWLMKYADNIVKVYSTSMAMLLTTVLSVHLFNFRPTLQLFLGIIVCMMSLHM 307
             + G+L S+  KYAD I+K YS+++A + T + S  LF    T+   LGI +  +S+H 
Sbjct: 291 NAAQGILSSFFFKYADTILKKYSSTVATIFTGIASAALFGHVITMNFLLGISIVFISMHQ 350

The following BLAST results are available for this feature:

BLAST of CmaCh08G001050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q654D9	8.1e-148	81.85	CMP-sialic acid transporter 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CSTLP1...	[more]
B8B350	2.3e-147	81.53	CMP-sialic acid transporter 1 OS=Oryza sativa subsp. indica OX=39946 GN=CSTLP1 P...	[more]
Q8LGE9	8.4e-145	76.49	CMP-sialic acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=At5g41760 PE=2 ...	[more]
B8B7Q4	5.4e-59	42.90	CMP-sialic acid transporter 2 OS=Oryza sativa subsp. indica OX=39946 GN=CSTLP2 P...	[more]
Q6ZL17	5.4e-59	42.90	CMP-sialic acid transporter 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CSTLP2...	[more]

BLAST of CmaCh08G001050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41760.1	5.9e-146	76.49	Nucleotide-sugar transporter family protein	[more]
AT5G41760.2	5.9e-146	76.49	Nucleotide-sugar transporter family protein	[more]
AT4G35335.1	1.4e-57	41.97	Nucleotide-sugar transporter family protein	[more]
AT3G59360.1	3.0e-33	27.30	UDP-galactose transporter 6	[more]
AT3G59360.2	3.0e-33	27.30	UDP-galactose transporter 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007271	Nucleotide-sugar transporter	PIRSF	PIRSF005799	UDP-gal_transpt	coord: 1..336 e-value: 1.6E-103 score: 344.0
IPR007271	Nucleotide-sugar transporter	PFAM	PF04142	Nuc_sug_transp	coord: 4..303 e-value: 8.9E-57 score: 192.6
IPR007271	Nucleotide-sugar transporter	PANTHER	PTHR10231	NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER	coord: 4..312
None	No IPR available	TIGRFAM	TIGR00803	TIGR00803	coord: 77..303 e-value: 1.2E-30 score: 104.8
None	No IPR available	PANTHER	PTHR10231:SF43	UDP-GALACTOSE TRANSLOCATOR	coord: 4..312
None	No IPR available	SUPERFAMILY	103481	Multidrug resistance efflux transporter EmrE	coord: 63..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G001050.1	CmaCh08G001050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0090481	pyrimidine nucleotide-sugar transmembrane transport
biological_process	GO:0015739	sialic acid transport
cellular_component	GO:0030173	integral component of Golgi membrane
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015165	pyrimidine nucleotide-sugar transmembrane transporter activity
molecular_function	GO:0015136	sialic acid transmembrane transporter activity