CmaCh08G000130 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh08G000130
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr08: 71431 .. 79921 (-)
RNA-Seq Expression	CmaCh08G000130
Synteny	CmaCh08G000130

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGACCTCTTCAATACTCCAATTCTTTTAATCAAACCTATAACTAGAACTTAAAGGGTATTTTGGTTTTTAATATATAGATGTGGATTTGTTATACAAGGGGCGAGTGAAATAGTAGTGGATGCCGAAGCTTTGTGGGGCATTTGGTTAGTAGTAGCAACACGTAAAACTCGGCCGCGGTAAGGGAGATGGCGGGTGCATTTTGGGGGACTCGGGTGCTGGAGATTGTGAAGAAGCACGATTCTGGAGGTTTAGTCTGGAAGAGAATTAAACTCACTACAACCCGTAAAGCCAACGCCAAGAAAAGGCTTCTTCGAGTTTGGCAGGTTCTCTCTCAATTCCAATCTCACTTCCTTTTTATGCCCGCCATCAGGTTCTGCAAATGATAATTTCATGGTTCTTTGTATACTCTATTGTCTTATATTTTTCATTCCACGCAACGGTACTTCTTATTTAATTCTGGAGGTTCGTCTGGAAATAAATATCAAATATTCGACTATCTGGCAATGCCTTGCTATGAGTTGGTTTTAGGAGTAGAACTTTTGGGGGCTTAGATATAATTGCACGAAGAGTAGGGTAAATAATACAGATAATATCGGAGCAGAAGAAGTAAATTTAGGATTCTTACAATTGCTAACGATGAGACCAGGGATGTGCATTACGTCAGGATATCTATTTGACATCATTTCCATTGCTTATGGTGCATTAAACAGGTATCTCTGTTATTTTTCTGCTCAAATATTTCGCTTATAGTTGCCAAAGTGAGCATAACTTAGCATAATTATATATATCCTGGATCATGAGGTTTGAGGTTTGAGGTTTGAATCCCCTAATTGTAGTTGAACTCAAAAAAAAATATCTCATAGGTGGTTGGATTGCTTTTAAGCTTTAGGATTCATCATGCACTGTGCAGAGAATTCTGCAGCATCACAAATTAATTGAAATGATATATATATATATATATATTTTAATTTTGTCGCTATATACAGAAATGATGTAGGAGTTAGATAATTCCATCTGCTTAATATAGTTGCCCTTTTAGTTTTGGTTGAAGCCTGGAGGTATACCCATTGTTTATAGTCAAAGATCGCAAACATGACATACCAATTTGGTTGTATGGCTTTCTTGGATTGCTTTGACTTCTCGAGGAAGGCTTACATGGGAATTGGACAAAAAGTAGGTTGAAATCACAAATATGACTGAAATGGGAATTGGTTGTGGAAGAGTTTCTCTCATCGTTCAATTTTATTTATTTATTTATTTATTTTTGTTTATTTTAGTTGTTTAGGGAAGAAAGGGGTTTTTCATTTTCCTTTGTTGGTTGCAAAGGTATCTTTCGAGTTTTTAAATTGAATAAGACCCTTGAGAATCTCATTAAAGTAAGGAGGATGCAAAAGAGGGAGATATCGTACACGCACCCCCCCCCCCCCCCCCCAAGAAGCTATCCTAATTGACAGGAATCATTATAACATCATAATTTCAAAAAAGAAACTGACAAAAGTACGTCAAACTAAAGCCAAAAATCTCAGTCTCTGTCAAGGTCAGTGATACTCTATCCTCCAAAATTATTTGTTTGTTTTTCTTTTTTACACGAGAGCTCTTACTGCATTTTTCAATGGGATCTTGCTTTTCCTTCCGAAGAATTTCCACAGATTTGTAAGAAGACATCCTTATTTAATACGAGAAAACACCGAGAAACCCTGAAACACCTGTGCAGAATCTCCCAGCTATTAGCAATAGGAGAATGGTGAATGGGAGATGGTTCTAATATTCTTAGGAGGTTTTACAAAGAATATGCCAACATGGAGTCAATAAACTTTTGGGGTTCCTTTTTCTGCAGTCAGTTTTAGGCTTTTAACCCTTCCAAGTTCCAATTAGAGACACAATTGTACTTTAGAAACTCTGTCTTTCCAAATAGATTAAGAACCTTCTCGTCAAGATCAACAATAGTATCCATAAGAAAGAGGATCAAACATAGACTTACATACAGGATCTTCCATCTTCTAGCATTAGGTTGTTGGGTTGTAAAAAATATCAAGGAAGTCATGTTGAAAAACTACCCACTCTGGTGTCTAAATGTGAGAGGGACTCTTCTAAACTACAATGTCAGGCTTCATGAGTATCTAATCGCATGTATCTACTGAAAACTTTTGAGTTTTCTGATCAAAATAGCTCGGGAAACAAACTTTAGGTGGATGGTTCCCCATCCATGTACACTTTGAAAAAGGAATTTTGTTTCCTTTAGGAAGAGAATTGATTCTCCACAACCTTTTAGCTTCTGGATGGAGTTGCCTAGTTAATGAGTTTTGTATTTATAATTTGTTTTGATTCATGCCATGGAGATCCATTTTGTGATCTCTTGGCTAGAGTGAGTTGGGTAATGTCTTAGCTTCCCTTGAAGTCTTCCATTTATGCACATGTTTGTGTTTAGGTAACATATCTTGTCCACAAAAAAAGGAAAAAAAAAAAAAAAAGAAGAAGAAAAATAATGTTTTGAACTTTTAATATTAAGCATGACTACCTTACCAGTTACATGTTCACATTGATTATTGCATTCATTCGAATGTAGAATAGTTCAAGTTGATAAGCATGGAGGAAATCTTCATGGGCCAACTCAAGATTAGATAGACTCATTGAAAGCAAGTTTAATCAGCAATGCAATATGTGAAATGGCTTTTCTGCCGAAGGGACCGGGGGAAGAACCATTTGACATAAGTCCTTCGAACCTGACATCTGCAGCTGCCTTTAGTGACAACAAGCCATGGACTTTAGATACTGTAACAGCCAAAGGTTTGCATTCACGAAAGGGCCAATGGCTCAGACACTCATGAATATGAAAAAGAAAATAGAAAAAAAGAAAAAAAAAAAAAAAGAGCAGAGAAAGGGACCACTTGACTGGAGGGTGATGGGAGATTGATCTTGGAGAGGATGAGCCATCGAAGTTTATAGATATATGTATAAATTTTTATGAAAAAAAATTGGATTTCTCCTTTAAAGGACTGGCCAGTCCGGGGCGTGATTAGCAAACTCAAAAAAATAAGTCTTTGCTGAAATGATGGAATTAGGAAATTCTTGGCAACATCTTCTCAATAATGCCAACAATCTTGTTGATCTTAAAGCCCATGATGAGTTGTAAGGATTTTCTCCTGTTGACACATCCTAAAAAGCCTTCTTAATTACCCTCTAATTCAAACTCCAAAACATAATGTTGAAGGAAGTTTATTTTTTGAGAGTGTGAAAATGGTTGGGATATGTAGCTTGATGCCTATTTATACTAAAGATATATTTAGTAAATTGAAACCTTATATAGGCCGTGCTCCCATACTTTTCTTCATTATTTGTATTCTCTGTTGTTGTACACACTGAAATCATCAATAAAACTTTTAGCCAATATTCCTCCTTGAATTTTCTCTCTCCTATTCTTTGTGTTCATCTTGATCGAGTGTGCGTTGTTGAGCGATCCTAACAAAAATCTCTCGAATTGGAGGAAGGAGATGAAAATTTCCAACTAATATAGAATAGTTGACAGCAAAAGGAAGAAAATCTTTTCTCTGAAATCCTAAGTCTGGATGGTGCATCCTTATCAACAACCTTCAAATTGAAAAAGAAATTCTTTTTTTGTTCAAAGACGATTTAGAAAAAGGGGATTAGTTTTCTAGCTTCAAACTCGAAATGGATCCAATTCCCAGGGCTCAAAGCTCACCTTTCAAATCTGACTTCAAAGGAGGATTTTTTTTGTTTGCTATTTATGGCTTGGTTTCCAGGGTCTCAATGGATTTATTTGTTGAATTCTTCAGCACAAAAAAAATGTCTTAGAAGCATCCTTGTAAACATTATGAAGGTGTTCCAAATATATATTATTTCCCAGGATGGTATCATTCACAAGTTTTTGAAGGAAGCCATCTTTGACATCCTCATGGAGATCATATGGAAGAATAGTAAAAGACTTTTGCCCTGTCAGCCTGCCTATCCCTTGCTTCTCTAAGATTATAGTTGATCAGCTTAAGGAGCTCTGTGTACTTCACGATCAATTATTTTTTTTTATTATTATAATGCAAAGTTTTGACTCTTGCTTAGTATTAAACGAGCTCATAAATGAATGTCCAAAGTAAGAAACATTGGCTTTTCCAATTAAAATTTTTTAGGCTAAAGGGTTTGGGAAGTACTTCCTTTTAAAGGACAAAGGTTTGTAGAAGAAATTAAGGAAGGTGATCTATACTTGCATTTCTAGTGTAAACTCTTGATTATCATCAATGGAAATCCTAGAGCCATAGCAAATCAGCTCATAGATGAATATGTTTAAAGAAAGAAACGGAAGCATTTTCAATTAACATTTCTTGAAGGCTAAAGGTTTTGGAAAGAACTTCCTTTTAAGGGCTAAAGGTTTTCAGAAGAAATTACGGAAGTTGATCTCCTTTATAGATTAAACTCTTCCATCTTCATCGATGACAAACCTAGAGATATAGTCTTTACTCTTAGAAGTATGAAGCATGGTAAGCCTCTGCTCCCTTCCTCTTTTGTTATTGTAGCTGATTCCCTTTAGTAGGCGCTTTTCAAGAGGCCTCCAAAGTGGCTACATTGTGCGTTTCAATGTGGAAAAGAATGTTGTCCAAGTTCCTTATCTTCGGTTTGCTAATTGCTAATGTATCCTTCTTTTCTCCTCTCTTTCCATGGAATAAGTGCTTAATATTTTGAATATCAAGATTTGTAAGGAATCTTCAGATCTCGATACTATCCAGTCCACAACAAAGCTCCTTATTTTAGATTCCTAAAATCATAGCTGGAGAATTTGGATTTCCACCTACTTTTGCTTACCTCTATACAGAAATCCCAAGACTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTAGGAAATCAATCATCCATTGAAAAAAAATATCAAAGAATACAAGAGCATAAAAAAAAAAAACAATCCCAAAAGATGAAGAACAAGAGCCAAAACTAGAAATGTCTCCAATCCAAAAGGACTAGACCAAGACCATAATTACAAAAAGATCGAGTGACTGACACCCACTAGAAAATATTAAACCTAACAAGCTCCCAAACCTCCTCATTCGACTTCTTTCTGTGTGGAAATTCTATTGTGTCTCTTAAGCTAGCTACCCCTATAAAACAACAAAGAAACTAGCTTTCCACAATACCGTGCCTCTCTCTAAAGGGTGGATACGCCTGCACCTCTTCTAGCAATGGCTGTCTATCTCTGTTACACACCGCACCCCACTAAAACCAAAAAACTCGTCCATCGACTCCAAAGGAAGTTAGCAAACTGGAACTCCCTCAGTAAATGAGCTACATCCTCCACATGCCTCTTTCTTTCAATTTTGATAGATAAAAAAAAAACTCCCCTTCCAAAGGTTGGCAGTCCCATCCTCATCTTAGGTGTCCTTGTAAACCTTCCAACTTGCTACATCGACACAATTTTAATGAATTCCTTTTGGGAGGAAACATTGAACGAAGGAGGCTCTCAATTTTTTTTTTTTTTTTATTGGGAACAATTATGATCTTGGTTTTGTTCTTTTGGATTGGAGTCATTTTTTGTAATTGGATGTTGGACGCCATTTTTTTCAGGATTGATTTTTTGTATGCCTATGTAAAGATTGGTTTCCAGAAATTTTATTTTTAGTTGACTTGTATGTAAAATGATGCTTCGAAATATATCCATCTGAAGATGGTTCATTCTAGAGCCAATGTATTTTCTCCTCTAAATTTTCCATATTTTTATACTTTGTATTTGTACTTTGGAAACATAGACGCTCTGCCTTTTGGTTGTTACCATGGAATTCTATTTTGAATTTCTGTTCTGTTCTCGTTCTTGTTTATATATTGTTTTTTTATAAAATGAAAAATTACCCATTCTTAAAACATCTTTTAAATTGGTGATATGTGTTCTTAATTCGTAGTATTCCTTCTTTCCAGAATGAGGCTGTTCTGAAGGCATGCTCGGAGCCACCTCCGCCTAAATCTTCAAGAGATGGAATTAATCAAGTTGAAAAAAAGGAGTAAGAACTCCATAGGATCCAAAAGAGTTTGACAACTTCGGCATTGCCGTGTCAGTTTTCTTTTTTTCCTATTTTTGCCTTTTAGAAAGGAAGAGTAAACATTAAGTAGGTTTGAGCGATGTCAAAAGTTTTCATCCTCGTATGTAAGCGATAACAATACACTATTGTGCAATTCCTGACTTTGAGTTTCACAGCACTTTTATTCAGGATTTAGTTCTTCACGGTCCTTGCTCCCTCATGAATGACTTTTTTCTTTCAGTAAAGATATTTGATATTTAGCTTTCTGAGCAATTTCACTATTGAAGTTTAGGGCTGAAAATGTCTGAACTGCAGGAGGCAAGCCTTCAAGAAAAATTTCACCCTTTCTATTGTGCAGTGCAGTGCATTTCTAAGTGGTTGCAACCCCTAAAAACACGAGATAGATTGTCTGATCGAGTAGAATAAGCCTTCTTGTATTGGATGTGAGTGACATGAACTTTACATACAGTTCTAATTTGTTTAGTAGCAATTTCTGCTGATATCTCTAAAACTCAAAAAGTTTTTTAGGTTATTCTTGGGGATTTTTTTCCCTTGATGGTTAGTCTGTTTGATTTCAGACCTCAACTTATGAGACCTTCACTTGTTGCTAAAGTAAATTCAGTTCAGAAAGTATGGGTATGAACTTGTTTGTACAGTTTGATACTTAAAGCTTAACTTATATCATACGTTAGGTAGTACTCCTCTCCTAATGGTAGAAGATAAGAGTAGTATATGTGGGTGGGGTTGCTCTCCATCATGGAGATACCTCTCTTCATATCCACTTGTGTATCAGACCGAACCATCTAAACTCTCAAATTTTCTTGAATAACATTTTTTATGCAGCAGCTGTTTTCAGTTTCGTCGTAACTGCTGGGCATGAGCTGTGGCCAACTACAGGTACTTTGCTGCTCAGTTTTTCATTTAATTTTTAGTATGCATTTCTTCAAAGTTTTTCCATTAAAGATTTGGAAATGCGTGTCTCAGAATGTCCGGCATTTACTAACCAACCATTGAACTGGAGAAGTATGTGTAGGTTGAACAAAACAAGGACATGAAAAAAGGAATCATATCCTGATTGTTCTTGTTCCTCACTTGCCTACTGGACCCCACCAACCAGAAATTACCTGGGGTGGATTTATTTTACATTAAGATGATTTTTTTTTTCTTCAGTTCTTTTGCAGAGATTCAGGGAGAAAAAAAAAATGGAGATAGATAAATGTTTTTGTTGCAGGGACGCAAAGCAACCTCTCTTATTTAATGTTTGTCCAAAACAAACAGCTTATAAGAGTGGTTGGGTGAAGAAGTGGTCAGCATACATAATTTTAATTGATGAAAATTCCTTCTCTGATGGGTATTTCTTTTTGTTCTAAATTTCTATATTTCCCTTTGCTTCATGGAGACTTCCCCTTACTATTGCCTTTTGATATGTTTCTAGGATTGGTAGGATTTTTCTTTAAATGTTATTGACCTTATTAGGTTAGCCTACATAAACAAAAAATGATGGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANAGTCTTAGCTGTGAGCTTTGTGGTCTTGACGAGCTGGCCACGTGATTGGCAAATGAGAAATCCCAAGTCAGCAATCCACAGTCTAATCCAATTCCCTCACCTCCTTTCCTCCTTCCCTTTTTTTTTTTTTTTCTCTCTGTCTTGACAATTAAATTTGTTCATAAAAAGGTGAAACGTGAAGAACTACAACTGCCTTTGTTGATTCTAACCTTCCATCACAAGAAATTCCAAGGCCACCTTTTTATTAATTTTCAAATACTGCTTTATATTGACTATGTTAAACAAAACCCCTTTCTTATGTAGAATGATTTCTATGCATCATGCCGCTTCCCCCTTTAACTCAGATTTATTGGATCTGTTAGCGTTTAATTAATTTAAATGAAATCAAACCAATTATTTTGGATTTGATCGATTTTCTACTATCTCTTGATGCAAAAAATTTCATAACATAAAATTATTTGAGGTTGAGGTAGCTAATGGGATGAGTGAACTTGTAGCTTGAGATTAAGAAATTTATGTGTTTCATAAATTTACCACCTATTTTTTTCTTCTTATTCTAATTTTTTTGCTTCGGTCAAAATTTTCCTTCTCTTCCACCACCTAATCGTGGATCTTTATTACCAATTTGTTTTGTTTTTTGACAAGCCGAAGTTATCCAACTGTGAAGGAAACCTTTATAATTATGCCGTCCTTTGCCTTCTTGGCGTCCATTTGGCGGCCATGCATTGGTGTGTGGCCCACTCTCTTAACCTCCGCGCCTTATGATATCACAATCTTTGCGTACAAGGAGTGCCCACCCCTTATTATACTCTCACATTAATTTCAACTATTATTTTTATATTAATAATACGCAGGGCGACGGTGGGTGAGGCAACCGCAGGCCGGCGTGGCCTTGCATGCGTGACA

mRNA sequence

TAGACCTCTTCAATACTCCAATTCTTTTAATCAAACCTATAACTAGAACTTAAAGGGTATTTTGGTTTTTAATATATAGATGTGGATTTGTTATACAAGGGGCGAGTGAAATAGTAGTGGATGCCGAAGCTTTGTGGGGCATTTGGTTAGTAGTAGCAACACGTAAAACTCGGCCGCGGTAAGGGAGATGGCGGGTGCATTTTGGGGGACTCGGGTGCTGGAGATTGTGAAGAAGCACGATTCTGGAGGTTTAGTCTGGAAGAGAATTAAACTCACTACAACCCGTAAAGCCAACGCCAAGAAAAGGCTTCTTCGAGTTTGGCAGAATGAGGCTGTTCTGAAGGCATGCTCGGAGCCACCTCCGCCTAAATCTTCAAGAGATGGAATTAATCAAGTTGAAAAAAAGGAGGCGACGGTGGGTGAGGCAACCGCAGGCCGGCGTGGCCTTGCATGCGTGACA

Coding sequence (CDS)

ATGGCGGGTGCATTTTGGGGGACTCGGGTGCTGGAGATTGTGAAGAAGCACGATTCTGGAGGTTTAGTCTGGAAGAGAATTAAACTCACTACAACCCGTAAAGCCAACGCCAAGAAAAGGCTTCTTCGAGTTTGGCAGAATGAGGCTGTTCTGAAGGCATGCTCGGAGCCACCTCCGCCTAAATCTTCAAGAGATGGAATTAATCAAGTTGAAAAAAAGGAGGCGACGGTGGGTGAGGCAACCGCAGGCCGGCGTGGCCTTGCATGCGTGACA

Protein sequence

MAGAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSEPPPPKSSRDGINQVEKKEATVGEATAGRRGLACVT

Homology

[Close]

BLAST of CmaCh08G000130 vs. TAIR 10
Match: AT1G27435.1 (unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 1.1e-22
Identity = 50/64 (78.12%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 3  GAFWGTRVLEIVKKHDSGGLVWKRIKLTTTRKANAKKRLLRVWQNEAVLKACSE---PPP 62
          GAFWGTRV+E+VKKHDSGGL+WKRIKLT TRKANAK RL RVWQNEAVL+AC E   P P
Sbjct: 6  GAFWGTRVMELVKKHDSGGLLWKRIKLTPTRKANAKTRLRRVWQNEAVLRACGESDAPNP 65

Query: 63 PKSS 64
          P +S
Sbjct: 66 PGAS 69

The following BLAST results are available for this feature:

BLAST of CmaCh08G000130 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh08G000130 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G27435.1	1.1e-22	78.13	unknown protein; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bact...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37703:SF2	RIBOSOMAL PROTEIN L31-RELATED	coord: 2..75
None	No IPR available	PANTHER	PTHR37703	RIBOSOMAL PROTEIN L31-RELATED	coord: 2..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh08G000130.1	CmaCh08G000130.1	mRNA