CmaCh07G013440 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh07G013440
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr07: 7648584 .. 7652242 (+)
RNA-Seq ExpressionCmaCh07G013440
SyntenyCmaCh07G013440
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ACCAAAATTAAGATGATTAGACTTCTTTGACCACCAAAATTAACATGGCGAGTCTAATCACTCCAAGGCTTCACCGAAGGTACCCCTAATATTCTCCTCCCATGTCAGGGTCCGGTCTATGCATTGAATTTTAATCTTTACCAACAACGAATGATCTCCACTTAGTTTCTTTCATGTTCAATCAAATCTTTTAGTGGGTATGCAAGCGAATTCTATTCGAAGATCCAAATGTTGCCCAATTTTGTTCTTCGATCATCCTGTGCTCTGAACATTTCCATTGAAAATTTTGTACAACAGGGCTTCCTTTTGCGCCAGAGTTGGATCATATTGATCAGCCCATCTTATGAGCTTACTGTTATCTTTCCATTTTCTTCCTTTACAATCGACTACTCTTCACTTGCAATCTAGGGCGATCGGTATTCTCTTATGGGTCGTTTTGATTTTCCTGTATCAAAACGGGAAAGTTGAGAATAAGAAGAGATTGTTGGGAATGAATTTCAAATGCTTTGAATGAAGTATGGCTGTGTTTCGTATGCGAGAATTTTTAGCTTTGTCAATATAATTTGCATAGATCGGAATACGATTGTTAGGGATGATATAGTCGGAAGTTGTGTGTTCAAATCTTTGATATCTCCAGAATTTGAAGAAATAGAATGCTTGGTCCCATGCTTGCATATCAAAAAATCCTAAATATGCAGATGAAAACTAGATTATAGAGGGATGGCTTTCGTTGTTTTTTTAAAGAAAATCAGCTTCATTGCATATGTATATATACAGATGAATGCATAAGAAATGGGTAGAACAGGACTGTCCCAATTATATTATTGGGGACAAGCAACTGGGCATTGGTTTAAAGTTTCTGATTCCACATGATATTTAGGTGTTTGTTTGTTCTATTTTTCTGATAATTGATGAGATCCCTAGCAACATAATGTGGTTTCTCATTAATTTACAGTTTTTCAAGGAACTTGTTATTTGTTGCTTATTCAGATTCAACTGTCATAAGAAGGAAATCCCCTTTTGGAATATCCTCTGGCCAGGAGCAAGAATTGCCAAAGGATCATACTTAGATTTCCTCTGCAAGACAGTTTGCCACTTAGGGCCAAAGTGAGCTCGCCATTCTTCTTGGGAGCTGTAGTGGGGGAGGTATTGCTTGACACCAGGGAGGTACTCAATACAGTAATCCAAAATTCTTTGATTTTGTGCTAAAATGTGTTCTAACCCATCTGTTCGTATGGAAGATGGAACTGCAGAAGATAAGAAAGCCACTAAGTAGAAAACTTCCTCTTCTGGAGTGGCCAAAGATGTTTTGTTGTTCCATCTGAACCAATGAAAAGTAAAGAAGAATGAGACTGAGAACATGATAAAAAGAAAGTTTTCATATATGAATTAAGTTATGAGGCAATTACTTGGATTTGTTAACTGGGTAGATTATGATGGGGCCATTGCTAGTATCCTTGAGGATGTTACCAAAGACCTCTTGAGCAAAATCGTGTATTTGGGTTCTAGGGATCAGTAGATTTAGCCATGGATGAGGAATTTCCCATAAGCCTTTAGCTCGTAGCTTGTTTTCGGAGACGTGGACACGGTCCAGGAAAGCCAGGTAAGTAACTTCTGATGTGAAGAGGGTGGATGGAATATAGTTCAATCCTGTCAATAAGCTTTCAACTTTCTGCATTAGAAGAAAAATAAGTTAGCAAGCAGTGTTTTATGGGCTGTTTTTGTTTTTAGATGGCAAAACTCCTCACCTTGTTTATAAAGTCAAGTTCATCTGGGTTGAAGTACTTTGCTATTTCCAAGCAGTAGAAAACTTTTCCATCTGAATTGAATTTGCTGGCTTGCAGTGGTTCTTGGGGATTAAAAGAAGATCTCCAGTTATTGAGGAGACCAGTTCTATTAATAAATACAAATCCTTCAATATAATCAAATTGATCATTGGATGATATTAGATGTTCTTGGTCTCTTGTAAATTTGGAGAAGTCTGAGTAAAGTACTCTTATCCATTTTACCTGTCAAAAGTGACGGATTGTGTTTCATAATTTGTGTACCTCGCTTTAATGAAATGGATGGAATATGGCCTTACCATTTTTGGTGCCTTTTCCAAAGAAATCCTTGCCCTTGTTATGATGCCAAACTGTCCAAGCCCGCCAAGAACAGCATGGAAAAGGTCTGCATTTTGATTCTCTGAACAGGCAAACACCTCCCCTTTTCCTGCAAAAGTTCAGACATCTTTAAGGAAATTCCAAACCTTGAAATGCGTTTAGTTGAAGCAAACACTCATGAAACATTTTATTAAGAACAATGAGTTGAGAAAACTAGAACATTACCAGGAAAGAAATAGTTGCTTCTTTGTGAAATGACTAGCAATGTTACATGAAAATTACCTGTGACAACTTCGAGCTGATATACGTTGCTGATTTGGGGTCCATGCCGGAAGGCCTGCCCACTAATGCCAGCATTTGACAAGGTGCCTCCAACAGTAAGATGCAGGTAATCTGTCCAGGATTTTGGTGCCAGCCCTTGTTTAAGAGTTTCATGCAGGATATTTATCCACAGCTCTCCAGCTGAAACGTCCACATAAGGTAATTCCCCTGCATTTATTTTCATTTCTAGCCCCTGAAATGATTCCATATTGATAACTACACCATTATAGGCTTGAGCTTGACCTTGGATGGAATGTCCATGGCCTCTAGCTGCAACCGTCAAGTCAGACGCATATCCCATGCTGAAAATATGGTTTATCGTGTTCGAAATATCGGAGACGGATTTTGGATGTAAGACAGCTAATGGGTATAAATTGTATCTGTTTCCAAAATCGGTTGCTGCTTTATGATTATTGTCAAAGCTGAGGTATCCATCCAATTCCAGTGTTTGCAGTTCATAAGAGGATATATCAGAGGAACCAAAATGGGGAGGAATTGTTGGGGCTGCAAAAAGGTGGTTGGTGCTGTCAGGTATGCAACTGATGTATAGAATTATGTATAACTTGAGGAAAATAATGCTTTGTTTGATGAAGCCAGAAGGCGGCAACCCCATCTTTCCTTAAGGAGAGAAAGAAAGAGTGATAAAAAGAATAAGAGGGAGAGAGAGAGAGAGAGAGCAAAAGGAGAGGTGCTGAAAAGCCTAAGGAATGAAGTGGAATGAAAGAGAATTTAAAGAAGTTCTTGGGTGGCATAGTCAAACATATAGTTGGTGGCATTGGGCGAGCTAGCTACCTGTAGTTCTTTTGGTTCACCTTTTTGAGGTTAAAAAAAAAACAGAGGAGATAAAAAAACTGCCCAAAAGCAAAAGCAAAAACATAAATATTTCCTTTTCCTTTTTCTTTTCTCGATTGACACTTTCTGAAGAACAGTTCTCAACCAAATTTTAGTGAAAGAAAACAAAAATCACCTTGACCATTAATTGAGGAAGGTGCAGAGTGGTGTTGTTTACTGCATGAAGCAAAGATTTTATGTTTCTCCTTATTCCAATCTTGTCAAAATTCACTGTTCGTCTTCTTTACACACTGAATGCGGCTGCAAAACCACTGTAATTGGCTGAATTTTCACTTTTTGTCTGCTGTTCATATATGGTACAGTTTGAATTTAATTTCTCTATTGCAGAGTGAATGGCGGGCTGGCCCCTACTCTGTTTCATGCTTCTTCAAGCTGAGTGTCTGA

mRNA sequence

ACCAAAATTAAGATGATTAGACTTCTTTGACCACCAAAATTAACATGGCGAGTCTAATCACTCCAAGGCTTCACCGAAGGTACCCCTAATATTCTCCTCCCATGTCAGGGTCCGGTCTATGCATTGAATTTTAATCTTTACCAACAACGAATGATCTCCACTTAGTTTCTTTCATGTTCAATCAAATCTTTTAGTGGGTATGCAAGCGAATTCTATTCGAAGATCCAAATGTTGCCCAATTTTGTTCTTCGATCATCCTGTGCTCTGAACATTTCCATTGAAAATTTTGTACAACAGGGCTTCCTTTTGCGCCAGAGTTGGATCATATTGATCAGCCCATCTTATGAGCTTACTGTTATCTTTCCATTTTCTTCCTTTACAATCGACTACTCTTCACTTGCAATCTAGGGCGATCGGTATTCTCTTATGGGTCGTTTTGATTTTCCTGTATCAAAACGGGAAAGTTGAGAATAAGAAGAGATTGTTGGGAATGAATTTCAAATGCTTTGAATGAAGTATGGCTGTGTTTCGTATGCGAGAATTTTTAGCTTTGTCAATATAATTTGCATAGATCGGAATACGATTGTTAGGGATGATATAGTCGGAAGTTGTGTGTTCAAATCTTTGATATCTCCAGAATTTGAAGAAATAGAATGCTTGGTCCCATGCTTGCATATCAAAAAATCCTAAATATGCAGATGAAAACTAGATTATAGAGGGATGGCTTTCGTTGTTTTTTTAAAGAAAATCAGCTTCATTGCATATGTATATATACAGATGAATGCATAAGAAATGGGTAGAACAGGACTGTCCCAATTATATTATTGGGGACAAGCAACTGGGCATTGGTTTAAAGTTTCTGATTCCACATGATATTTAGGTGTTTGTTTGTTCTATTTTTCTGATAATTGATGAGATCCCTAGCAACATAATGTGGTTTCTCATTAATTTACAGTTTTTCAAGGAACTTGTTATTTGTTGCTTATTCAGATTCAACTGTCATAAGAAGGAAATCCCCTTTTGGAATATCCTCTGGCCAGGAGCAAGAATTGCCAAAGGATCATACTTAGATTTCCTCTGCAAGACAGTTTGCCACTTAGGGCCAAAGTGAGCTCGCCATTCTTCTTGGGAGCTGTAGTGGGGGAGGTATTGCTTGACACCAGGGAGGTACTCAATACAGTAATCCAAAATTCTTTGATTTTGTGCTAAAATGTGTTCTAACCCATCTGTTCGTATGGAAGATGGAACTGCAGAAGATAAGAAAGCCACTAAGTAGAAAACTTCCTCTTCTGGAGTGGCCAAAGATGTTTTGTTGTTCCATCTGAACCAATGAAAAGTAAAGAAGAATGAGACTGAGAACATGATAAAAAGAAAGTTTTCATATATGAATTAAGTTATGAGGCAATTACTTGGATTTGTTAACTGGGTAGATTATGATGGGGCCATTGCTAGTATCCTTGAGGATGTTACCAAAGACCTCTTGAGCAAAATCGTGTATTTGGGTTCTAGGGATCAGTAGATTTAGCCATGGATGAGGAATTTCCCATAAGCCTTTAGCTCGTAGCTTGTTTTCGGAGACGTGGACACGGTCCAGGAAAGCCAGGTAAGTAACTTCTGATGTGAAGAGGGTGGATGGAATATAGTTCAATCCTGTCAATAAGCTTTCAACTTTCTGCATTAGAAGAAAAATAAGTTAGCAAGCAGTGTTTTATGGGCTGTTTTTGTTTTTAGATGGCAAAACTCCTCACCTTGTTTATAAAGTCAAGTTCATCTGGGTTGAAGTACTTTGCTATTTCCAAGCAGTAGAAAACTTTTCCATCTGAATTGAATTTGCTGGCTTGCAGTGGTTCTTGGGGATTAAAAGAAGATCTCCAGTTATTGAGGAGACCAGTTCTATTAATAAATACAAATCCTTCAATATAATCAAATTGATCATTGGATGATATTAGATGTTCTTGGTCTCTTGTAAATTTGGAGAAGTCTGAGTAAAGTACTCTTATCCATTTTACCTGTCAAAAGTGACGGATTGTGTTTCATAATTTGTGTACCTCGCTTTAATGAAATGGATGGAATATGGCCTTACCATTTTTGGTGCCTTTTCCAAAGAAATCCTTGCCCTTGTTATGATGCCAAACTGTCCAAGCCCGCCAAGAACAGCATGGAAAAGGTCTGCATTTTGATTCTCTGAACAGGCAAACACCTCCCCTTTTCCTGCAAAAGTTCAGACATCTTTAAGGAAATTCCAAACCTTGAAATGCGTTTAGTTGAAGCAAACACTCATGAAACATTTTATTAAGAACAATGAGTTGAGAAAACTAGAACATTACCAGGAAAGAAATAGTTGCTTCTTTGTGAAATGACTAGCAATGTTACATGAAAATTACCTGTGACAACTTCGAGCTGATATACGTTGCTGATTTGGGGTCCATGCCGGAAGGCCTGCCCACTAATGCCAGCATTTGACAAGGTGCCTCCAACAGTAAGATGCAGGTAATCTGTCCAGGATTTTGGTGCCAGCCCTTGTTTAAGAGTTTCATGCAGGATATTTATCCACAGCTCTCCAGCTGAAACGTCCACATAAGGCTTGAGCTTGACCTTGGATGGAATGTCCATGGCCTCTAGCTGCAACCGTCAAGTCAGACGCATATCCCATGCTGAAAATATGGTTTATCGTGTTCGAAATATCGGAGACGGATTTTGGATTGTTTGCAGTTCATAAGAGGATATATCAGAGGAACCAAAATGGGGAGGAATTGTTGGGGCTGCAAAAAGGTGGTTGGTGCTGTCAGAGTGAATGGCGGGCTGGCCCCTACTCTGTTTCATGCTTCTTCAAGCTGAGTGTCTGA

Coding sequence (CDS)

ATGGAATGTCCATGGCCTCTAGCTGCAACCGTCAAGTCAGACGCATATCCCATGCTGAAAATATGGTTTATCGTGTTCGAAATATCGGAGACGGATTTTGGATTGTTTGCAGTTCATAAGAGGATATATCAGAGGAACCAAAATGGGGAGGAATTGTTGGGGCTGCAAAAAGGTGGTTGGTGCTGTCAGAGTGAATGGCGGGCTGGCCCCTACTCTGTTTCATGCTTCTTCAAGCTGAGTGTCTGA

Protein sequence

MECPWPLAATVKSDAYPMLKIWFIVFEISETDFGLFAVHKRIYQRNQNGEELLGLQKGGWCCQSEWRAGPYSVSCFFKLSV
Homology
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BLAST of CmaCh07G013440 vs. NCBI nr
Match: KAG6603188.1 (hypothetical protein SDJN03_03797, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 92.8 bits (229), Expect = 1.4e-15
Identity = 46/68 (67.65%), Postives = 50/68 (73.53%), Query Frame = 0 

Query: 1  MECPWPLAATVKSDAYPMLKIWFIVFEISETDFG-----LFAVHKRIYQRNQNGEELLGL 60
          MECPWPLAATV SD YP+LKIWFIV +ISET+ G     +FA H  IYQRNQN  ELL L
Sbjct: 1  MECPWPLAATVNSDTYPILKIWFIVRDISETELGCNTANVFAGHTLIYQRNQNKVELLRL 60

Query: 61 QKGGWCCQ 64
            GG CCQ
Sbjct: 61 HIGGSCCQ 68

The following BLAST results are available for this feature:
BLAST of CmaCh07G013440 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G013440 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh07G013440 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6603188.11.4e-1567.65hypothetical protein SDJN03_03797, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmaCh07G013440 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh07G013440.1CmaCh07G013440.1mRNA