CmaCh07G013400 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G013400
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Chromatin-remodeling ATPase INO80
Location	Cma_Chr07: 7611324 .. 7629053 (-)
RNA-Seq Expression	CmaCh07G013400
Synteny	CmaCh07G013400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCGCGTGGAGGCAGGTGTTGATTACTTGAGAGTTATTGCGCGTACGGAGTCTGAGTCTGGTGGTAGGCACGACAAAATTTAGAAATTAATTTGAATTTTTATGTCAATAATAATACGCGCTCTTTACGGTCAATAATACTACGCGCTCCGCTGGCTGCTTCTCCCTTCTTTCTTATTTCTTCAAAGCGAAGGAATAAAAGAAACCCCCGTATTTGAATTTTGATGGCTTTAATAAAATGACAACAATACCCACGTTCCACCCATGACTACAAACCCTTTGACTTTTTCCTTTTTAAGTAAAATAAAAGTCAACGCTCAAAAAATATGTTCCATCCAACGACTATCAATTTTAGTCTTTATCGTAAAATTATTATTAAAATTAATGTAATTTTAAAGACTAATTCGTTACCTAATAAAAACTAATAATTAAATTAGAGATGTTTACAGGGATGGAGACAGGTACGGGGACTCCAAACTTGTATAGCTAACTGGAGAAATCTTTTTTTGCTACCCGTCCTCTCATTCGGGGCAGGTTCCTATGGGCCCCCGACTTATATAGACATCTCTGGCTAGATCTTAGGAATGAAGTAAAAAAAATCTTTTTCAACTCATACCTCCGACTCCTCGCTGTTGCTCAATCTTATTCAACTCATGTAGTGCACTTTCCTTTTCCCCCTCTAAGTTGTCGTACCAATACATTACACGCATTCTATAGATATCATCGCAGATGTTGTTTGGGAGCTTGAAGCTATGGTTCAACATTAATTTAGTTATCAACTTATCCCTTTAATTTTAAAGTTTACGTTTAATTCGATAGAATTAAGAATTAAAATGGTCAAATATATTATTTTATGTTCTAATTGGACAATTGAGCTATTTCAAATGTTTCATTTTTATGTGCATAAAAAGAACAATTAACCCATTTTACTTTGTTGTACTAATTTTCGGGTGGTGCATTAATGTCTATTTAGTAGAGTCGTTTATCACTCGTAATAGTATCTTTCACGATATTACATATCATTCACTTTTATATATAAGATCCCACGTCGTTGAAGAGGGGAACGAATCATTCCTTATAACGGTGTGAAAACCTCTCTCTAGTAGACGTATTTTAAAAACTACGAGAGTTTTGTGCTTGGTGTTCATGCGCTGCTGATTAGTTGCTTTCTTGTTTGTGTTTTAGTAGGGTTGGGTGATTTAATTGTTTTTTTAATGTTTGTTGTTAGGATTGACAGTGGGTTTTAGTCGATTCTTTTTATTTGTTTAGTTTTTTGTTTGAAAGTTTTGGGTCCTGCTACAGCCATTGGTGAACTTCCAACTTCCGCAACCAGAGGATGATTTTCATTATTATGCTTTAATAGTAGTCATGATGAGAGCAGAGGTAGCCCAGGTACATGTTTTTGTGATTAAATCTGTGATATCTGATTCGTCCCCAACTTGCAAATGTACTAGAGATGGAAGATTATGGCTATAAATATATTTTTCTTGAAGAGGGTGTGTACTGATGGTGGATGAATATCAGGTAGAACAAGTACAACCCAGGGTAATGGTACCATGACTAAGAGAGAGTTGAGGTTGGTGAGAAAAAGAAGGCAGTCCCTGAACAGTGAGGAGGAGGATGATGGTGCGAACGATTACTACGGGACGCACGCCACTGAAGAGCGGTATCGGCAAATGCTTGGAGAACACATTAAGAATTATAAGCGAAGGTCTAAACACTCCTCATCTCCCATGCCTGCACGTATGGGTAATTCAGTGTCCAAAGGTAACTCAAGTTGAAGAGCTAGGAGGTCAGGGAGTGAACAACATGAAGGATTGCTTGAAATGGAAACAGCAAATGAATGGCTTAATGATTATAATCCTCATAGACCAGGAATTCATCATGATCCAGATTTTGACCCGCTGCGTACCCCTAACAGGTTTTCTTTTTTAAATGATTATCTTAAGAGTGAGAAGTGTTTTAGTTGTGACATCATCTTAAGATCTTTCTTTCACAGCATTTCATCGAAAGCAGCTAATTGATGCCAAGAGGTTGTCAGCATGTATTATTTATTCCTTATTAGGGTTAGGGATTTTGGTTAAACTTTAGCTTCTAATTATGTACTTTATCTGGAATGTTTGTAGTGTGGTATCTTAAACAGGTGAAAATGAAGGTCAGCAGATCTCTTAAAAGGACAAGGAAATTAGCTAGAGACATGTTGCTCTTTTGGAAGCGTATTGATAAGGAGATGGTATTCTTCTTTTCTTTATGAGATTACCAGGAAGGGACTTGGAATTCAGATAGTGTGCCTGCTGAGGAAGAAGATCCTGAGGAGGCCGAACTGAAGAAGGAGGCACTTACAGTTGCTCAAGATGCAGTCTCGAAGCAGAAAAGGTTAACAAGTGCATTTGATGATGATGTTAAGCACTGTCATAAGCCCTATTCTCTAGGACCAAGACCTATTCTCAAGGTCTTAGCTAATATTTTTTAGGCCTGTTAGTTTATATTTAGGTTTAGCAGAAGGCTATATAATGCCATTCTTTCTCCTGTTGAAATAATCAAGCTTTGTGTGCAATATTGTATGCCTTGAGTAAATTTGGTGTTGTGAGTACATTTGTTCCGCTTTCGGCGCACAACAAGTGGTATCAAAGCCAAATTGTGGTATTTTGGGGTATTGTGAAAGCTTGGGCCTCATCGACCATTAGACGTGCTCACAATCGTGTTTATTCTCTTGAAAATCAATTTTCAAGAATTGTGGTTTTGAGTTTCATCCAGATTAATTATTGCAAATGGCAGAACCATCACGACGTGGATCGAGAGTGTGGATCGAGAGTGTTGATGGAACCAATAATTTTGGTGTTTGTCGAGGCGAAGTTAGCGATTTGTTGGTCATGCAAGACCTCGATGTCTCTCTCCAAGAGGAAATGCCTGAAGACATGACAAAAGCAGAATGGACGAAATTAAATCGGCAAGCCTGTGGAATTATTCGATCCTGTCTTGGCAAGGATCAGAAATATCCATTTATGAAGGTTACCATGGCGAAAGAATTATGGGACAAGCTTGAAGCGAAATATATGAAGAAGAGTGTGGAAAATAAACTTTATTTGAAGAAGAAACTCTTCCGTTTTGATTACAAGGAAGACATCTCAATGGTTGAGCATTTGGATGATTTTAACAAAATCATCACTGATTTGCTCAATCTTGATGTTAAGATTGATGATGAGGACAAGACGTTGTTGTTATTAAACTCTTTGCGTGAATCATACGAGTTTTTAGTAACGACCCTACTACATGGAATCACTAATATTGATTTTGAAGATGTTTCAAATGCCTTAATAAACAATGAGATGCGAAAGAAGGAAAAGGAGACGTATCAAAGCTCTAGCTCAAATGTTCTCACTGCTCATGGAAGGACTTCCAATTGGAAAAAGAACGAATGTGGAGAGTCTCGATTAAAGTCGAGAGGTAGATCTGATAATTGGAGAAAACTTGATAAAAATGAGTGTGCATATTGTCGACAGAAAGGCCATTGGAAAAAAGATTGTTCGATCTTAAAAGAGAAGGGGTCGAAGTCCAATGTGGTTAGAGATGACGACACTGATACAGATGATGCCTTGACAATCTCCCTATCAGTCAGCCAAACCAGTGAATGGATTCTTGATTCTGGGTGCTCCTATCATATGTGTCCCAACAAAGAGATGTTTTTGGACTTCAAAGAGTTCAATGGTGGAGTTGTCTATATGGGAAATGATAGTACTTGTAAGATAATGGGAATCAGCTCAGTACAAATCAAGATGTTTGATGGGGCTATACGAAAACTCAAAGATGTGAGGTATGTCCTTGACTTGAAGAAAAATTTGATTTCACTTGGCGTTTTGGATGCGAGTGGTTATCGCATCATTTTGGAAGGAGGGAATTTGAAAGTAGCTTGTGGAGCTTTGGTGGCAATTACAGGAACTAGAAGAGGTAGCATATACTACCTCAACGGAACCACAATAATTGGGCATGCTGCTGTGGCAAGTTCGAAAGAACAAGACATATCGAAATTATGGCACATGCGACTCGGGCATGCTGGTGAGAAGGCGCTTCAGACACTGGTGAAACAAGGAGTCCTTAAGGGTGCCACAACTGGAAGAATTGATTTCTGTGAACATTGTATATTTGGCAAACAAAAAAATGTGAAGTTTGGTACAACTATACACCAAACAAAGGGCATTTTGGATTATGTTCACACTGATGTATGGGGTCCCACAAAGAATGTCTCATTGGGAGGAAAGAGGTGGTTCGTCACCTTTATTGATGACTACTCGAAGAGAGTTTGGATGTATCCCATGAGGCACAAAAACGAGGTTCTCCAAATCTTCCTAGAGTGGAAGAAAATGGTAGAGAATCAGACGGACAGGAAAATCAAAAGGCTGAGATCAGACAACGGAGGAGAATATACTTATGATCCATTCCTTAAAGTATGCCGAGATGAAGGGATCGTTCGACACTTCACTGTTCCTGGTAAGCCACAACAAAATGGAGTTGCTGAGAGAATGAACCAGACATTAATAGAGAAGGTTCGATGCATATTGTCTCAAGCAGGATTGAGTAAGGCATTTTGGGCTGAGGCTCTCAGTTATGCAGTTCACTTGGTGAATCGTTTACCTGTTTCTGGAAACGGTGGGAGAACTCCGCTTGAGGTATGGTCAGGTAGTCCTGTTAGTGATTATGATAAATTGCATGTGTTTGGGTGTCCTGCTTATTATCATGTGACAGACTCAAAGCTGGATCCTAGAGCAAAAAAAGCCAAGTTTATGGGCTTTAGCAAAGGTGTGAAGGGCTATAGGTTATGGTGTCAGAAACAAGTAAGATTGTGAATAGTCGAGATGTGACATTCGATGAGTCTGGAATGTTTTTGCAGAAAATTGAAAATAATGACGAGGCATTGAAGCAGGTGGAGAAGGTGGTGTTCTCTCCTGATGTGGTTGCTCCTACTGAAGAACCTATTGACCAGGTAAATAATAACTTTGATGTCTTAGAACAGAAAGAGCAAAGTCTTGAGGAGCAAAGCCTTGTAAATGAAAGAGTGGAGGAACCTGAGTCAATCGCCAAGAATAGACCACGAAGGGTAATTCGAAAACCTGCAAGGTTTGATGATACGATAGCATATGCTTTCTCTTTGATTGATGGAGTTCCTAACAGTTACAAAGATGCTATTCAGAGCCCGGATAGCTTACACTGGCAAGAGGCTGTGAATCAGGAGATAGCATCATTGGAGATAAATCAAACTTGGGATTTGGTACAACTTCCAAAAGGTAAGAAGGAAATTGGTTGTAAATGGGTTTTTGCAAAAAAGGAAGACCCTTTTGGTATACGTTATAAGGCTCGACTTGTGGCTAAAGGCTACGCACAAAACGAAGGTATTGATTACAATGAAATTTTCTCACCTGTGGTAAAACATTCTTCGATTCGAATTTTGTTGGCTTTGGTTGCTCAATTTTATCTAGAACTTGCACAACTCGATGTAAAAACTACCTTTTTGCATCGAGATTTGGAAGAAGAAATATATATGGCGCAACCAGTTGATTTTCGAGTAGTTGGACAGCAACATTTAGTATGCAGATTGAAGAAATCTTTGTATGGGCTGAAGCAATCCCCTCGCCAATGGTATAAAAGGTTTGATCATTTCATGGTAGAGCATATGTATACTCATAGTCAATTTGACCATTGTGTGTATTATCGATGTCTCGATAATGGATCGTTTATTTACTTGCTCTTATATGTTGATGATATGTTAATTGCTTCAAAGAGACAGGTGGAGATTGATAATCTCAAAGATGAGCTTTCTAAAACATTTGAAATGAAAGACTTAGGCAATGCAAAGAAAATACTTGGAATGGAGATAGAGCGAGATCGAAAAAAAGGTACAGTCTAGTTGACTCAGTCTCAATATCTACGCAAGGTATTGTCAAAATTTAGTTTGAATGATCCAACCAAACCCGTTAGTACTCCACTTGCTCCTCATTTCAAGCTTAATGCTTCCATGTGTCCAAGTTCTGACGATGACAAAAGGTATATGGAGAACATTCCTTATACAAATGTTGTTGGTGCGTTGATGTATGTTATGGTGTGTACTCGACCTGATCTTTCACACGCAGTAAGCATGGTGAGTCGTTATATGCATAATCCTGGTAAAGAGCATTGGCAGGCTGTAAAATGGATTCTTAGGTACATTCTTGGCACTATTGATGTTGGTATTAAGTTTCAAAAACAAGAAATGTTTAATCTTGACAATCGTGTAGCTGGTTTTGTGGATTCTGATTATGCTGGTGATTTGGATAAGCGACGATCTACTACGGGATATTTATTTATTATGGCTGGTGGACCTGTTTGTTGGCGTTCAACATTGCAGTCTACTGTTGCATTGCATTGTCTACCACCAAAGTAGAGTATATGACAGTAACGGAAGCTTTTAAAGAAGCTATTTGGATGCATGGTTTGATCAATGACTTGGGTATTTTGCAGGGACATATAAATGTATTTTGTGATAGCCAGAGCGCTATTTGCTTGTCAAAAAATCAAGTTCATCATGCTCGTACAAAACACATTGATGTCCGTTTTCACTTTATTCGAGAAATTATTAGCAAAGGGGATATTCGTTTACTAAAAATTGGAACTGCTGATAACCCTGCTGATATGTTGACAAAGGTGATCGCTCGTGAAAAGTTCTGCCATTGTTTGGATCTCATCAACGTCGGAAGGAAGGAGTAGTGTGTTGACGTGGTAACAACCAAATTCGCTATCAACTTGGAGATCTTATGACAAGGTGGAGATTGTTAAACACTGTCATAAGCCCTCTTCTATAGGACCAAGACCTATTCTCAAGGTCTTGCTAATATTTTAGGCTGGTTAGTTTATCTTTAGGTTTAGCAGAAGGCTATATAATGTCATTCTTTCTGCCGTTGAAAAATCAAGTTTTTGTGTGCAATATTGTATGTCTTGAGTGATTTTGGTGTTGTGAGTACATTTGTTGCGCTTTCGGCTCTCAACAGAGCATTCATCTGTTGTGCGCCGAAAGCGGAACAAATGTACTCACAACACCAAATTTACTCAAGGCATACAATATTGCACACAAAGCTTGATTATTTCAACAGCAGAAAGAATGGCATTATATAGCCTTCTGCTAAACCTAAATATAAACTAACAGGCCTAAAAAATATTAGCTAAGACCTTGAGAATAGGTCTTGGTCCTAGAGAATAGGGCTTATGACAGTGCTTAACAATCTCCACCTTGTCATAAGATTTCCAAGTTGATAGTGAATTTGGTTGCTACCACATCAACACACTACTCCTTCCTTCCGACGTTGATGAGATCCAAACAATGGCAGAACTTTTCACGAGCGACCACCTTTGTCAACATATCAGCAGCATATAAGAGCAAGTAGATAAACGATCCATCATCGAGACATCGATAATACACACAATGGTCAAATTGACTATGAGTATACATATGCTCTACCATGAAATGATCAAACCTTTTATACCATTGGCGAGGGGATTGCTTCAGCCCATACAAAGATTTCTTCAATCTGCATACTAAATGTTGCTGTCCAACTACTCGGAAACCAACTGGTTGCGTCATATATATTTCTTCTTCCAAATCTCCATGCAAAAAAGCAGTTTTTACATCGAGTTGTGCAAGCTCAAGATTAAATTGAGCAACCAAAGCCAACAAAATTCGAATCGAAGAATGTTTTACCACAGGTGAGAAAATTTCATTGTAATCAATACCTTCCTTTTGTGCGTAGCCTTTAGCCACAAGTCGAGCCTTATAACGTATACCAAAAGGGTCTTCCTTTTTTGCAAAAACCCATTTACAACCAATTTCCTTCTTACCTTTTGGAAGTTGTACCAAATCCCAAGTTTGATTTATCTCCAATGATGCTATCTCCTGATTCACAGCCTCTTGCCAGTGTAAGCTATCCGGGCTCTGAATAGCATCTTTGTAACTGTTAGGAACTTCATCAATCAAAGAGAAAGCATATGCTATCGTATCATCAAACTTTGCAGGTTTTCGAATTACCCTTCGTGGTCTATTCTTGGCGATTGACTCAGGTTCCTCCACTCTTTCATTTACAAGGCTTTGCTCCTCAAGACTTTGCTCTTTCTGTTCTAAGACATCAAAGTTATTATTTACCTGGTCAATAGGTTCTTCAGTAGGAGCAACCACATCAGGAGAGAACACCACCTTCTCCACCTGCTTCAATGCCTCGTCATTATTTTCAATTTTCTGCAAAAACATTCCAGACTCATCGAATGTCACATCTCGACTATTCACAATCTTACTTGTTTCTGACACCATAACCTATAGTCCTTCACACCTTTGCTAAAGCCCATAAACTTGGCTTTTTCCTTTGCTAAAGCCCATAAACTTGGCTTTTTTTGCTCTAGGATCCAGCTTTGAGTCTGTCACATGATAATAAGCAGGACACCCAAACACATGCAATTTATCATAATCACTAACAGGACTACCTGACCATACCTCAAGCGGAGTTCTCCCACCGTTTCCAGAAACAGGTAAACGATTCACCAAGTGAACTGCATAACTGAGAGCCTCAGCCCAAAATGCCTTACTCAATCCTGCTTGAGACAATATGCATCGAACCTTCTCTATTAATGTCTGGTTCATTCTCTCAGCAACTCCATTTTGTTGTGGCTTACCAGGAACAGTGAAGTGTCGAACGATCCCTTCATCTCGGCATACTTTAAGGAATGGATCATAAGTATATTCTCCTCCGTTGTCTGATCTCAGCCTTTTGATTTTCCTGTCCGTCTGATTCTCTACCATTTTCTTCCACTCTAGGAAGATTTGGAGAACCTCGTTTTTGTGCCTCATGGGATACATCCAAACTCTCTTCGAGTAGTCATCAATAAAGGTGACGAACCACCTCTTTCCTCCCAATGAGACATTCTTTGTGGGACCCCATACATCAGTGTGAACATAATCCAAAATGCCCTTTGTTTGGTGTATAGTTGTACCAAACTTCACATTTTTTTGTTTGCCAAATATACAATGTTCACAGAAATCAATTCTTCCAGTTGTGGCACCCTTAAGGACTCCTTGTTTCACCAGTGTCTGAAGCGCCTTCTCACCAGCATGCCCGAGTCGCATGTGCCATAATTTCGATATGTCTTGTTCTTTCGAACTTGCCACAGCAGCATGCCCAATTATTGTGGTTCCGTTGAGGTAGTATATGCTACCTCTTCTAGTTCCTGTAATTGCCACCAAAGCTCCACAAGCTACTTTCAAATTCCCTCCTTCCAAAATGATGCGATAACCACTCGCATCCAAAACGCCAAGTGAAATCAAATTTTTCTTCAAGTCAAGGACATACCTCACATCTTTGAGTTTTCGTATAGCCCCATCAAACATCTTGATTTGTACTGAGCCGATTCCCATTATCTTACAAGTACTATCATTTCCCATATAGACAACTCCACCATTGAACTCTTTGAAGTCCAAAGACATCTCTTTGTTGGGACACATATGATAGGAGCACCCAGAATCAAGAATCCATTCACTGGTTTGGCTGACTGATAGGGAGATTGTCAAGGCATCATCTGTATCAGTGTCGTCATCTCTAACCACATTGGACTTCGACCCCTTCTCTTTTAAGATCGAACAATCTTTTTTCCAATGGCCTTTCTGTCGACAATATGCACACTCATTTTTATCAAGTTTTCTCCAATTATCAGATCTACCTCTCGACTTTAATCGAGACTCTCCACATTCGTTCTTTTTCCAATTGGAAGTCCTTCCATGAGCAGTGAGAACATTTGAGCTAGAGCTTTGATACGTCTCCTTTTCCTTCTTTCGCATCTCATTGTTTATTAAGGCATTTGAAACATCTTCAAAATCAATATTAGTGATTCCATGTAGTAGGGTCGTTACTAAAAACTCGTAGGATTCCGGCAAAGAGTTTAATAACAACAACGCCTTGTCCTCGTCATCAATCTTAACATCAAGATTGAGCAAATCAGTGATGATTTTGTTAAAATCATCCAAATGCTCAGCCATTGAGATGCCTTCCTTGTAATCAAAACGGAAGAGTTTCTTCTTCAAATAGAGTTTATTTTCCACACTCTTCTTCATATATTTCGCTTCAAGCTTGTCCCATAATTCTTTCGCCATGGTAACCTTCATAAATGGATATTTCTGATCCTTGCCAAGACAGGATCGAATAATTCCACAGGCTTGCCGATTTAATTTCGTCCATTCTGCTTCTGTCATGTCTTCAGGCATTTCCTCTTGGAGAGAGACATCGAGGTCTTGCATGACCAACAAATCGCTAACTTCGCCTCGCCAAACACCAAAATTATTGGTTCCATCAAATTTCTCTACTTCGAGATTGGAACTCCACACTCTCGATCCACGTCGTGATGGTTCTGCCATTTGCAATAATTAATCTGGATGAAACTCAAAACCACAATTCTTGAAAATTGATTTTCAAGAGAATAAACACGATTGTGAGCACGTCTAATGGTCGATGAGGCCCAAGCTTTCACAATACCCCAAAATACCACAACTTGGCTTTGATACCACTTGTTGTGCGCCGAAAGCGGAACAAATGTACTCACAACACCAAATTTACTCAAGGCATACAATATTGCACACAAAGCTTGATTATTTCAACAGAAGAAAGAATGGCATTATATAGCCTTCTGCTAAACCTAAATATAAACTAACAGGCCTAAAAAATATTAGCTAAGACCTTGAGAATAGGTCTTGGTCCTAGAGAATAAAGCTTATGACAGTGTTTAACGAGGTTGCCGGAGCTAATAACATAGATCTGCTTCATCCATGAGTTTTCATTTTTGTTTTTTTTTTTAATTAAAATTTTCTTCCCATTTTGGAGTTTGAGGCAGTTGCAATTTTTTTAGTCAAATTAATTGAACTATATTGTTGTTTGGCAGCTCAACCATGCCTGTAACTTCAACAGTACAGACACCCGAGTTGTTTAAAGGTAGCCTTAAAGCATATCAGCTAAAAGGTCTCCAATGGTTGGTCAATTGTTATGAGCAGGTTGTATGAAGTTCCTGTTAAATGATTATCTTGGATTCTTTTTTGTTGTTGTTAAAAAGTTAAGCTGTAGTGGCATGGTTATCTACAGGGTTTAAATGGTATACTTGCTGATGAAATGGGGCTTGGAAAGACCATTCAGGCAATGGTATTTTTGGCTCATTTGGCTGAGGTAATGATCATACTAAGTTCTTTACTTTAAGTGTTATTTCTTTCTTCGTATTGACTATGATCACTCTCTTGTATCAGGATAAAAATATATGGGGGCCTTTTCTCGTTGTTGCACCTGCGGCTGTCTTGAACAATTGGGTCGATGAAATCAATCGTTTCTGTCCTGACGCCTGTTCTTTTCTTCCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCNCATCTTATTTTTTTCTTGTTGTTTGTTTTCTTTCTTTATCTATCTGGGATGCTGGTTTTCACATCCTCGTTACCAACTATCAGCTACTTGTTGCTGACGAAAAGTATTTTCGGCGTGTTAAGTGGCAATATATGGTATTGGATGAGGCACAGGCAATCAAAAGTTCTACGAGGTTTGTTCCGATTTAGAACCAGTTGGATCAGGATAGGGTGCTATGCTTTTGTTAACATAAAATCGTCTTGCTCGTGCCATGAGTGTTTTAGTAAACAACCAAACAGTTGAATGGTATTAGTCAGCAGAAGCACCACAATTATGACCGTTGTTTTGGCTCTACAGTAATGTGTTATTTTGTTTTCATTAAATTGCAGCATAAGGTGGAAAACACTGCTAAGCTTTAATTGTCAGAACCGCTTGCTGCTTACTGGGACACCCACATTGGATGGGACGTTGGGCCCCGAAAAGGGGTGGATTGTGAGATTTCACATTGGATGGGAGGAGAACAAAACATTCTTTACATGAATGTAGAAACTTTTCCCCAGCAGACGTGTTTTAAAAACCTTGAGGAGAAGCCTGAATGGGAAAGTCCAAAAAGAACAATATCTGCTAGCGGTGGACTTGGGCCGTTACAACAAATGAGTGTAGAATTGCTTGCTTCATTTTTTGTGTGGCCTATGTTATATATTCATCATATCTCAGACTAACTTACAAGAATGTTTTGAGGCTTTAATCTTTCCTCAACAGGAGAGGCTTCAGTCCAACGTTGGGCTTCTTCACACAGCATACACGTTTATTCCAAGGATTCGAGCTCCACCGGTATATTTTTTTTCAAGAAACTAAAACTCGGTGAAATGGTTTTTATCATTTGATGTACTTATTTAATGCTTCGTCGCTGCATCTATTTTGCAGATAGGTATTCACTGCTAAGATAGAAGCTTTACTTACCAAACGGTTGAACAATTGCATGACCCTTGGGTCTGACTTTAACGGACCAGGGAAGCCAAACGAACCCCATCCTTTGATTCAAGAGATTGATTCTGAAATACCAGTTTCCCAGCCTGCTCTTCAGTTGACGTACAGTATTTTCGGGTCCTCCCCTCCAATGCAAAGTTTTGATCCAGCAAAGTTGCTCACGGTTGGTGTTTTTTTCCTACTCATTTTACATTTGACTTCAAGGAATCTTTATATTTTGAAGTAAGGTTCTGTAACGAATTTATGTTAATTTTATATAGGACTCTGGGAAGCTACAAACACTCGATATACTACTGAAACACTTGCGAGCCGAAAATCATCGTGTACTCCTGTTTGCTCAAATGACAAAAATGTTGAATATTCTTGAGGTATTCATTCTTCGTCGGTATTGTTCTTGGCTACTTGAAACTTTAAAACAAGACAATACCTTTTTATAAGCGCCTCAACATTATTGTTTAACTAGGTTTCTGGAGTTCTTGGTTGTTTTTCACAGAATTTCGTGAGAGGAAATTGGTTGTTGGAAGAAAATGCTTAACAAAAAGGAGAGAGAAAATTAACTGAATTCTGACTGAGTTCCGATTTATTTTATTTTCTGAACAAATCTCCTATTTAAAATAAAAATCATTCTAAAAATGGCTGGAGAGTGGCCAACTAAATCTGTGCCACTCCTACAAAATTTCAGTCTAAAATTCTGCTGATTCATTCGACGTGTTTTGTCAAATGGTCAAACTGGCGATTTTCTGAAATCGTGTGAATAAGAAAAAACGGTAAAACTCAGGTTTTATCTAACAATCTCCTCCTAAAACCTATAGTATATCTACCTTACTATTTGAACTCCGATCTTTGAGCGTAGTTCTTCAAATTTCACCCGCGTCAGGGACTTGGTGAAGATGTCTCCAAGTTGTTCCTCTGTTCGGATGTAATCAATTTTGATGAGCCCTCGATCTGCACATTCTCGAATGTAGTGGAATCTGATTTCTATGTGCTTGCTTCGTTCATGCAAAACTGGATTTTTGATCAGGGAGATCGTAGCTTTGTTGTCTACGTATAGCATTGGTGGATCACTTTCTCTCCCGATGAGTTCTTCCATTAGTCGCGCAAGCCAGATCCCTTGTGTTGCTGCCATCGAAGCGGCGATGTATTCTGCTTCACAGGAAGACAAAGCAACTACCTTCTGTTTTGTTGATTGCCAGCAGATTGCGCCGCCTGAGAGAAAGTAGATCATTTCGCTAGTGCTCTTACGATCATCAACGTCACCGGCCATGTCACTATCACTGTAGCCAACTAGTTTGAGTTTCTCCTTTCCGCTCCCTGCGCAGTATCTTACACCCCAGCCTCTGGTTCCGGCTACATAGCGCAGGATGCGCTTGACAGCCACTAAATGCTCCTCCTTAGGTGCTTCCATAAACCGGCTCACATATCCAACAGAATAAGCAAGATCAGGACGAGAGTTTACCAGATAGCGCAAACTCCCGACAATGTTGCGGTAATTGGTGGAGTCGACTGTCGTCGTAGTGCCAGCCTTCCTTAGTTGGAGTCGGGCCTCCATTGGCGTCCTTGTAGGATTACTGTCCACAAGTCCAGTTGTGTCCAGCAGCTTCTTTGCGTATGCACTTTGGCAGATGGAGATGCCGGTAGAATTCTGTTGCACTTCGATGCCGAGATAGTAGCTGAGCACGCCGAGATCGCTCATCTCGAAGTTTTTCGACATCTCCTTCTTGATCCTTCCGAGGACTTCCATGTCACCTCCAGTGATTATGAGGTCGTCGACGTACACTCCCACGATTAGTCGCTTCTTGTCATGGCCGTGCGTGTACATGCCATGCTCAGAGGCGCAACGTTTGAATTTCAGTGACAGTAAGGTACTGTCGAGCTTCGCGTTCCAGGCTCGTGGAGCTTGTCGAAGCCCGTAGAGTGCCTTGTGCAAGCGCAATACTTTATTGGGGTTGTTGTTATCCAGGAAGCCAGGTGGTTGTCGGACATAAACAGTCTCCTTCAGCTCTCCGTTAAGGAAAGCAAACTTTACGTCCATATGGTGAACCTCCCACGAGTAATGTGCTGCAATTGCAAGTAAGAAACGAACGGATTTTAACCTTGCCACTGGCGTAAATACCTCTTCGAAGTCCACTCCTTGCTTCTGGACGTAGCCCTTCGCCACCAGACGGGCCTTGTGCTTCACAACTTCTCCTTTTTCGTTGCGCTTTAGTTTGAAGACCCATTTGAGCCCTATGGTTTGGTGTCCCGGCGGCATATCCTCCAGACTTCACGTCTGATTTTCGGTGATGGATGTCATCTCCTCCTACATTGCCTTCAGCCAGCACGGGTTCTTTTCTGCTTCGGCGAAGGTGTTCGGTTCATCTGCACTGATGGCATGTAGTTCGGCCACTTCTTCGAGCTCGCGCACTGCCAGTCCAGGTGGTTCACCTCCTCCTACTAGGTCGTCCATCCTCCGGTACCTGGCCTCCAGATCAGTATCGTGATCGGCATCCAACGTCGAATCCGCAGTCCGTGGTGTTGCGAATTCCACTGGTTCAGGGGTTGCACCTGCTGGCGGCGGTGACGGCTGCTGATGCTGGGCTCCTTCTTCCGGCTCGGTGACGAGGTACTTCACCGTAAATTGATTTGGATTATGGTCTGCCTCGATCACGTCATTCCACTGCCAGAAGGTGCTTTCGTCGAAGACGACGTCGCGAGACACGTGAGCTCGCCCCCCTATAGGATCATATAGTCTGTACGCCTTGCTCCCGGGTTCATAGCCGATAAAAACGATCTTCAGCCCCCTAGGATCGAGTTTGGCGGGGTGGGGACGTGTTAACTTCATGTATGCGACGCAGCTGAACACGCGAAAATGATGTACCGCTGGTTTTTTGTTGTACCATGCCTCATATGGTGTCTTCCCGTCAAGGCTTCGGGTTGGTGACCGATTGAGGAGATATACGGCCGTCATTACTGCCTCTCCCCAGAATCTCCCAGGCATCCCGGCCGTCACCAACAATGACCTTGCTGTCCCGACGATGGTCTGATTCCGGCGCTCCACCACTCCGTTCTGTTGGGGGGAGTAGGGCGTCGTTAGGTGCCGTTGTATGCCGATTTCGTCACAGTACTTACCGAAACTTGTCGAGGTGAATTCTCCGCCTCGGTCTGTGCGCAACACTCGCATCTTCTTCTCACATTCGGCCTCCGCTCGCGCTTTAATGCACTTAACTGCCTCTGCCGCCTCATGAAGCGGCTTTTGTCATCGACTAACAGGAGGAAGAGACTCTTACCGCCTGGGGTCGCTGGCTTGGCTTGATGGGCCCGCAGATATCGCCGTGTACAAGCTCCAACGGCTCATCGGCTCGATAGGATGTTCGAGACGGAAAGGGTGTGCGCCTCTGTTTGCCGATGAGGCACCCGTCGCACAGCTTGTTCACGCCTTTGATTGCTGGCAAACCGTGCACTAACTCCTCCTTCCGTAGTTTTTCTAGAGCAGGAAAGTTTAAATGCCCGTACCTTGCGTGCCACCTCCAAGATACCTCTTCGGTCTTGGCCGAGAGACTGACAGGTTGCTCTATCTCTAACTCCAGGATGTAAAGATGGTTTGTCGTGCGTCTTGCCTGTGTGAGCAGCCGTCGTTGATTATCGCAAATTTTGAGTAGTTCGCGCTCGATGGAGATGAAGCAGCCTCTCTCATCGAGTTGACCCAGGCTCACAAGGTTAGCCGTGAGCCTTGGGATGGAAGTAGACGTCGGTCAGCTTGCGATGCTCGCCTCCCTTGCTGGCGAACAGGATGGTGCCGCGTCCTTCGATCTCGACGACGGATCCGTCGCTGAATTTCACCATCCCGCGGATCCCCGAGTCGAGTTCGGAGAATGCAGATCTAGCCACGGTCATATGGTTTGTTGCCCCTGTGTCTAGGATCCATTGCTGGTCCTTGTGTTGCTCGCCCCGCTCGCTGATCTGAGCGAACACTCGCTCCTCCTCCAGTTGAATTGGCTCCCCCTCCTCCGTGTCCTTAAAAAAGTGGATCTTCGAGAGCTCCTTCCGCAACTGCTCAATGTTGGATTCCCACACTCGCTGTACCACCGCGGACCCAACGGGATTTGATTCCCTCCCAGGCCTCTCTGGGGGCACAGATCGTAATATGGCGGGCAGTCGTTGTCTCCCTAATCACGGCATCGGCGTGGAGCACGGTGAGCTTGGTGGAGAGAGATGCCAGCATCTCTGGGGGCACAGATCATAATATGGCGGGCAGTCGTTGTCTCCCTAATCACGGCATCGGCGTGGAGCACAGTGAGCTTGGTGGAGAGAGATGCCAGCATCTCTGGGGGCACAGATCGTAAAATATGGCGGGCAGTCGTTGTCTCCCTAATCACGGCATCGACGTGGAGGAGTGAGTGAGTGAGCCTGCCCGAGATGGGCCCCACGATGTGTATGTTTTTACACTTCACATTTTCTACTACTCGAACCTGAGACCTTTGTGATGTTAGGTCAAAGCTCTAACCACTTAAGCTATTCAACTTGTTTGTAGATAGATTGACTCCTCTGCAATGATATACACCGATCTTCAACTTGGCTAAAAAAGGAGAGAGAAAATTAACTGAATTCTGACTGCGTTTCGATTTATTTTATTTTCTGAACGAGTGGCCAACTAAATATGTGTCACTCCCTACAAAATTTCAGTCTAAAATTATGGTGATCCATTCGACCTGTTTTGTCAAACTGGCGATTTTCTGAAATCGTGTGAATAAGAAAAAACGGTAAAACTCAGGTTTTATCTAACATTCTTTTGCTCGCTTTTACAATTACAACATGTTTTTGCAGGATTACATGAATTATCGGAAGTATAAATACCTTAGACTCGATGGATCCTCCACTATAATGGATCGTCGAGATATGGTCGGGGAATTCCAACTTCGGTATGGACTCACTTGACGTCGAAATGATGGTTATTACATCGTTTTCTACTTTCAGAATCTGTTATTTTGTAATGCAATCATGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGGAATGATATTTTTGTGTTCTTATTGAGCACAAGAGCTGGTGGGTTTGGCATTAACTTAACAGCTGCTGATACTGTCATCTTCTATGAAAATGATTGGAATCCGACATTGGATTTGCAGGCGATGGACAGAGCTCACCGTCTCGGACAGACAAAAGACGTTAGTTTCGTTTCATCAGTGAATTTGAGATTTGGGAAAAACCTGCTTTAA

mRNA sequence

ATGAAGCGCGTGGAGGCAGGTGTTGATTACTTGAGATTTTGGGTCCTGCTACAGCCATTGGTGAACTTCCAACTTCCGCAACCAGAGGATGATTTTCATTATTATGCTTTAATAGTAGTCATGATGAGAGCAGAGGTAGCCCAGGTACATGTTTTTGTGATTAAATCTGTGATATCTGATTCGTCCCCAACTTGCAAATGTAGAACAAGTACAACCCAGGGTAATGGTACCATGACTAAGAGAGAGTTGAGGTTGGTGAGAAAAAGAAGGCAGTCCCTGAACAGTGAGGAGGAGGATGATGGTGCGAACGATTACTACGGGACGCACGCCACTGAAGAGCGGTATCGGCAAATGCTTGGAGAACACATTAAGAATTATAAGCGAAGGTCTAAACACTCCTCATCTCCCATGCCTGCACGTATGGGTAATTCAGTGTCCAAAGCAAATGAATGGCTTAATGATTATAATCCTCATAGACCAGGAATTCATCATGATCCAGATTTTGACCCGCTGCGTACCCCTAACAGCTCAACCATGCCTGTAACTTCAACAGTACAGACACCCGAGTTGTTTAAAGGTAGCCTTAAAGCATATCAGCTAAAAGGTCTCCAATGGTTGGTCAATTGTTATGAGCAGGGTTTAAATGGTATACTTGCTGATGAAATGGGGCTTGGAAAGACCATTCAGGCAATGGTATTTTTGGCTCATTTGGCTGAGGAGAGGCTTCAGTCCAACGTTGGGCTTCTTCACACAGCATACACGTTTATTCCAAGGATTCGAGCTCCACCGGTATTCACTGCTAAGATAGAAGCTTTACTTACCAAACGGTTGAACAATTGCATGACCCTTGGGTCTGACTTTAACGGACCAGGGAAGCCAAACGAACCCCATCCTTTGATTCAAGAGATTGATTCTGAAATACCAGTTTCCCAGCCTGCTCTTCAGTTGACGTACAGTATTTTCGGGTCCTCCCCTCCAATGCAAAGTTTTGATCCAGCAAAGTTGCTCACGGACTCTGGGAAGCTACAAACACTCGATATACTACTGAAACACTTGCGAGCCGAAAATCATCGTGTACTCCTGTTTGCTCAAATGACAAAAATGTTGAATATTCTTGAGGTATTCATTCTTCGTCGGAATGATATTTTTGTGTTCTTATTGAGCACAAGAGCTGGTGGGTTTGGCATTAACTTAACAGCTGCTGATACTGTCATCTTCTATGAAAATGATTGGAATCCGACATTGGATTTGCAGGCGATGGACAGAGCTCACCGTCTCGGACAGACAAAAGACGTTAGTTTCGTTTCATCAGTGAATTTGAGATTTGGGAAAAACCTGCTTTAA

Coding sequence (CDS)

ATGAAGCGCGTGGAGGCAGGTGTTGATTACTTGAGATTTTGGGTCCTGCTACAGCCATTGGTGAACTTCCAACTTCCGCAACCAGAGGATGATTTTCATTATTATGCTTTAATAGTAGTCATGATGAGAGCAGAGGTAGCCCAGGTACATGTTTTTGTGATTAAATCTGTGATATCTGATTCGTCCCCAACTTGCAAATGTAGAACAAGTACAACCCAGGGTAATGGTACCATGACTAAGAGAGAGTTGAGGTTGGTGAGAAAAAGAAGGCAGTCCCTGAACAGTGAGGAGGAGGATGATGGTGCGAACGATTACTACGGGACGCACGCCACTGAAGAGCGGTATCGGCAAATGCTTGGAGAACACATTAAGAATTATAAGCGAAGGTCTAAACACTCCTCATCTCCCATGCCTGCACGTATGGGTAATTCAGTGTCCAAAGCAAATGAATGGCTTAATGATTATAATCCTCATAGACCAGGAATTCATCATGATCCAGATTTTGACCCGCTGCGTACCCCTAACAGCTCAACCATGCCTGTAACTTCAACAGTACAGACACCCGAGTTGTTTAAAGGTAGCCTTAAAGCATATCAGCTAAAAGGTCTCCAATGGTTGGTCAATTGTTATGAGCAGGGTTTAAATGGTATACTTGCTGATGAAATGGGGCTTGGAAAGACCATTCAGGCAATGGTATTTTTGGCTCATTTGGCTGAGGAGAGGCTTCAGTCCAACGTTGGGCTTCTTCACACAGCATACACGTTTATTCCAAGGATTCGAGCTCCACCGGTATTCACTGCTAAGATAGAAGCTTTACTTACCAAACGGTTGAACAATTGCATGACCCTTGGGTCTGACTTTAACGGACCAGGGAAGCCAAACGAACCCCATCCTTTGATTCAAGAGATTGATTCTGAAATACCAGTTTCCCAGCCTGCTCTTCAGTTGACGTACAGTATTTTCGGGTCCTCCCCTCCAATGCAAAGTTTTGATCCAGCAAAGTTGCTCACGGACTCTGGGAAGCTACAAACACTCGATATACTACTGAAACACTTGCGAGCCGAAAATCATCGTGTACTCCTGTTTGCTCAAATGACAAAAATGTTGAATATTCTTGAGGTATTCATTCTTCGTCGGAATGATATTTTTGTGTTCTTATTGAGCACAAGAGCTGGTGGGTTTGGCATTAACTTAACAGCTGCTGATACTGTCATCTTCTATGAAAATGATTGGAATCCGACATTGGATTTGCAGGCGATGGACAGAGCTCACCGTCTCGGACAGACAAAAGACGTTAGTTTCGTTTCATCAGTGAATTTGAGATTTGGGAAAAACCTGCTTTAA

Protein sequence

MKRVEAGVDYLRFWVLLQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTSTTQGNGTMTKRELRLVRKRRQSLNSEEEDDGANDYYGTHATEERYRQMLGEHIKNYKRRSKHSSSPMPARMGNSVSKANEWLNDYNPHRPGIHHDPDFDPLRTPNSSTMPVTSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAEERLQSNVGLLHTAYTFIPRIRAPPVFTAKIEALLTKRLNNCMTLGSDFNGPGKPNEPHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLDILLKHLRAENHRVLLFAQMTKMLNILEVFILRRNDIFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVSFVSSVNLRFGKNLL

Homology

[Close]

BLAST of CmaCh07G013400 vs. ExPASy Swiss-Prot
Match: Q8RXS6 (Chromatin-remodeling ATPase INO80 OS=Arabidopsis thaliana OX=3702 GN=INO80 PE=2 SV=2)

HSP 1 Score: 264.6 bits (675), Expect = 2.0e-69
Identity = 151/251 (60.16%), Postives = 170/251 (67.73%), Query Frame = 0


Query: 222  MGLGKTIQAMVFLAHLAEERLQSNVGLLHTAYTFIPRIRAPPV------------FTAKI 281
            +  G T  +   L    ++R  S++ LLH+AYT+IP+ RAPPV             T ++
Sbjct: 1075 LSTGPTRPSFEALVISHQDRFLSSIKLLHSAYTYIPKARAPPVSIHCSDRNSAYRVTEEL 1134

Query: 282  EALLTKRLNNCMTLGSDFNGPGKPNE-PHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQ 341
                 KRL       S+ NGP KPN  PHPLIQEIDSE+PV QPALQLT+ IFGS PPMQ
Sbjct: 1135 HQPWLKRLLIGFARTSEANGPRKPNSFPHPLIQEIDSELPVVQPALQLTHRIFGSCPPMQ 1194

Query: 342  SFDPAKLLTDSGKLQTLDILLKHLRAENHRVLLFAQMTKMLNILEVFI------------ 401
            SFDPAKLLTDSGKLQTLDILLK LRA NHRVLLFAQMTKMLNILE ++            
Sbjct: 1195 SFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDG 1254

Query: 402  --------------LRRNDIFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDR 434
                            R+DIFVFLLSTRAGG GINLTAADTVIFYE+DWNPTLDLQAMDR
Sbjct: 1255 SSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDR 1314

HSP 2 Score: 128.6 bits (322), Expect = 1.7e-28
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 175 NSSTMPVTSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFL 234
           N STMPVTSTVQTPELFKG+LK YQ+KGLQWLVNCYEQGLNGILADEMGLGKTIQAM FL
Sbjct: 566 NPSTMPVTSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFL 625

Query: 235 AHLAEER 242
           AHLAEE+
Sbjct: 626 AHLAEEK 632

HSP 3 Score: 70.1 bits (170), Expect = 7.2e-11
Identity = 51/178 (28.65%), Postives = 75/178 (42.13%), Query Frame = 0


Query: 17  LQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTSTTQGNG 76
           L+PL+ F++P+PED+  YY                    S   D S + +        NG
Sbjct: 19  LEPLMKFRIPKPEDEVDYYG-------------------SSSQDESRSTQGGVVANYSNG 78

Query: 77  TMTKRELRLVRKRRQSLNSEEEDDGANDYYGTHATEERYRQMLGEHIKNYKRRSKHSSSP 136
           + ++      +++R +   + EDD  +D Y  H TEE YR MLGEH++ +K RSK +   
Sbjct: 79  SKSRMNASSKKRKRWTEAEDAEDD--DDLYNQHVTEEHYRSMLGEHVQKFKNRSKETQGN 138

Query: 137 MPARMGNSVSKAN------------------------EWLNDYNPHRPGIHHDPDFDP 171
            P  MG  V K+N                         +  D  PHR G +HD D  P
Sbjct: 139 PPHLMGFPVLKSNVGSYRGRKPGNDYHGRFYDMDNSPNFAADVTPHRRGSYHDRDITP 175

[Close]

BLAST of CmaCh07G013400 vs. ExPASy Swiss-Prot
Match: Q2UTQ9 (Chromatin-remodeling ATPase INO80 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=ino80 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.7e-31
Identity = 88/208 (42.31%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 257  PRIRAPPVFTAKIEALLTKRLN----NCMTLGSDFNGPGKPNEPHPLIQEIDSEIPVS-Q 316
            P   APP+  +         +N    N     + F+ P K  E   L +++D  IP S  
Sbjct: 1129 PAASAPPITVSSSSRAPLSEMNDSLFNVSVRHALFSTPSKQLEQQILEKKLD-PIPYSLP 1188

Query: 317  PALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLDILLKHLRAENHRVLLFAQMTKMLNI 376
            P L    SI G    ++     + +TDSGKL  LD LL+ L+A  HRVLL+ QMT+M+++
Sbjct: 1189 PMLPQPISIKGRYTHIEVPSMRRFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDL 1248

Query: 377  LEVFILRRN--------------------------DIFVFLLSTRAGGFGINLTAADTVI 434
            +E ++  RN                          +IFVFLLSTRAGG GINLTAADTVI
Sbjct: 1249 MEEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPEIFVFLLSTRAGGLGINLTAADTVI 1308

HSP 2 Score: 79.3 bits (194), Expect = 1.2e-13
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0


Query: 185 VQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAE 240
           +  P +    LK YQLKGL WLVN YEQG+NGILADEMGLGKTIQ++  +A+LAE
Sbjct: 623 ISQPTMLTAKLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAE 677

[Close]

BLAST of CmaCh07G013400 vs. ExPASy Swiss-Prot
Match: Q5BAZ5 (Chromatin-remodeling ATPase INO80 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=ino80 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.7e-31
Identity = 88/207 (42.51%), Postives = 116/207 (56.04%), Query Frame = 0


Query: 257  PRIRAPPV--FTAKIEALLTKR--LNNCMTLGSDFNGPGKPNEPHPLIQEIDSEIPVSQP 316
            P   APP+   ++  EAL+  +  L N     + F  P K  E   + Q++D       P
Sbjct: 1234 PAASAPPITLVSSGQEALIETQDALFNVPVQHALFGTPSKAMEEQIIEQQLDPTPYSLPP 1293

Query: 317  ALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLDILLKHLRAENHRVLLFAQMTKMLNIL 376
             L    S  G    ++     + +TDSGKL  LD LL+ L+A  HRVLL+ QMT+M++++
Sbjct: 1294 MLPEPISTKGRYTHIEVPSMRRFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLM 1353

Query: 377  EVFILRRN--------------------------DIFVFLLSTRAGGFGINLTAADTVIF 434
            E ++  RN                          DIFVFLLSTRAGG GINLTAADTVIF
Sbjct: 1354 EEYLTYRNYKYCRLDGSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIF 1413

HSP 2 Score: 77.8 bits (190), Expect = 3.5e-13
Identity = 44/101 (43.56%), Postives = 58/101 (57.43%), Query Frame = 0


Query: 139 ARMGNSVSKANEWLNDYNPHRPGIHHDPDFDPLRTPNSSTMPVTSTVQTPELFKGSLKAY 198
           A   ++V KA E    ++          D   L   N +++     +  P +    LK Y
Sbjct: 743 ANAQSAVQKAQERARAFDDPNKSTMDTMDDSELNFQNPTSLG-DIEISQPTMLTAKLKEY 802

Query: 199 QLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAE 240
           QLKGL WLVN YEQG+NGILADEMGLGKTIQ++  +A+LAE
Sbjct: 803 QLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAE 842

[Close]

BLAST of CmaCh07G013400 vs. ExPASy Swiss-Prot
Match: Q9ULG1 (Chromatin-remodeling ATPase INO80 OS=Homo sapiens OX=9606 GN=INO80 PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 3.7e-31
Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 335  LLTDSGKLQTLDILLKHLRAENHRVLLFAQMTKMLNILEVFIL----------------- 394
            L+TDSGKL  LD+LL  L+++ HRVL+++QMT+M+++LE +++                 
Sbjct: 1096 LITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISE 1155

Query: 395  ---------RRNDIFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQ 434
                      RNDIFVFLLSTRAGG GINLTAADTVIFY++DWNPT+D QAMDRAHRLGQ
Sbjct: 1156 RRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1215

HSP 2 Score: 86.3 bits (212), Expect = 9.8e-16
Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 185 VQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAEER--- 244
           +  P +F G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++  LAHLAE     
Sbjct: 508 IPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIW 567

Query: 245 -------LQSNVGLLHTAYT-FIPRIRAPP 264
                    S +   H  +T F+P+ +  P
Sbjct: 568 GPFLIISPASTLNNWHQEFTRFVPKFKVLP 597

[Close]

BLAST of CmaCh07G013400 vs. ExPASy Swiss-Prot
Match: Q6ZPV2 (Chromatin-remodeling ATPase INO80 OS=Mus musculus OX=10090 GN=Ino80 PE=1 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 4.8e-31
Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 0


Query: 335  LLTDSGKLQTLDILLKHLRAENHRVLLFAQMTKMLNILEVFIL----------------- 394
            L+TDSGKL  LD+LL  L+++ HRVL+++QMT+M+++LE +++                 
Sbjct: 1099 LITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISE 1158

Query: 395  ---------RRNDIFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQ 434
                      RNDIFVFLLSTRAGG GINLTAADTVIFY++DWNPT+D QAMDRAHRLGQ
Sbjct: 1159 RRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQ 1218

HSP 2 Score: 86.3 bits (212), Expect = 9.8e-16
Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 0


Query: 185 VQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAEER--- 244
           +  P +F G LK YQLKG+ WL N YEQG+NGILADEMGLGKT+Q++  LAHLAE     
Sbjct: 510 IPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIW 569

Query: 245 -------LQSNVGLLHTAYT-FIPRIRAPP 264
                    S +   H  +T F+P+ +  P
Sbjct: 570 GPFLIISPASTLNNWHQEFTRFVPKFKVLP 599

[Close]

BLAST of CmaCh07G013400 vs. ExPASy TrEMBL
Match: A0A6J1EH30 (Chromatin-remodeling ATPase INO80 OS=Cucurbita moschata OX=3662 GN=LOC111432477 PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 3.8e-79
Identity = 171/232 (73.71%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 240  ERLQSNVGLLHTAYTFIPRIRAPPV--------FTAK-IEAL---LTKRLNNCMTLGSDF 299
            ERLQSNVGLLH AYTFIPRIRAPP+        FT + +E L     KRL       SDF
Sbjct: 1087 ERLQSNVGLLHAAYTFIPRIRAPPIGIHCSDRSFTYRTVEQLHDPWVKRLFIGFARTSDF 1146

Query: 300  NGPGKPNEPHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLDI 359
            NGPGKPNEPHPLIQEIDSEIPVSQPALQLTY IFGSSPPMQSFDPAKLLTDSGKLQTLDI
Sbjct: 1147 NGPGKPNEPHPLIQEIDSEIPVSQPALQLTYGIFGSSPPMQSFDPAKLLTDSGKLQTLDI 1206

Query: 360  LLKHLRAENHRVLLFAQMTKMLNILEVFI-------LR-------------------RND 419
            LLK LRAENHR+LLFAQMTKMLNILE ++       LR                   RND
Sbjct: 1207 LLKRLRAENHRILLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVREFQLRND 1266

Query: 420  IFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVS 434
            IFVFLLSTRAGG GINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDV+
Sbjct: 1267 IFVFLLSTRAGGLGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVT 1318

[Close]

BLAST of CmaCh07G013400 vs. ExPASy TrEMBL
Match: A0A6J1EH30 (Chromatin-remodeling ATPase INO80 OS=Cucurbita moschata OX=3662 GN=LOC111432477 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.9e-47
Identity = 116/179 (64.80%), Postives = 119/179 (66.48%), Query Frame = 0


Query: 17  LQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTSTTQGNG 76
           L+PLVNFQLPQPEDDF YYA                   +   D S     RT TTQGNG
Sbjct: 18  LEPLVNFQLPQPEDDFDYYA-------------------NSSHDESRDSPGRTITTQGNG 77

Query: 77  TMTKRELRLVRKRRQSLNSEEEDD-GANDYYGTHATEERYRQMLGEHIKNYKRRSKHSSS 136
           TMTKREL LVRKRRQSLNSEEE+D GANDYYGTH TEERYRQMLGEHIKNYKRRSKH  S
Sbjct: 78  TMTKRELSLVRKRRQSLNSEEEEDHGANDYYGTHVTEERYRQMLGEHIKNYKRRSKH-PS 137

Query: 137 PMPARMGNSVSKAN-------------------EWLNDYNPHRPGIHHDPDFDPLRTPN 176
           PMPARMGNSVSK N                   E  NDYNPHRPGIHHDPDF  L TPN
Sbjct: 138 PMPARMGNSVSKGNSSLRARRSGSEQHEGFLEMETANDYNPHRPGIHHDPDFASLLTPN 176

HSP 2 Score: 129.0 bits (323), Expect = 4.8e-26
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 177 STMPVTSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH 236
           STMPVTSTVQTPELFKGSLK YQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH
Sbjct: 565 STMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH 624

Query: 237 LAEER 242
           LAE++
Sbjct: 625 LAEDK 629

HSP 3 Score: 305.4 bits (781), Expect = 3.8e-79
Identity = 171/232 (73.71%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 240  ERLQSNVGLLHTAYTFIPRIRAPPV--------FTAK-IEAL---LTKRLNNCMTLGSDF 299
            ERLQSNVGLLH AYTFIPRIRAPP+        FT + +E L     KRL       SDF
Sbjct: 1028 ERLQSNVGLLHAAYTFIPRIRAPPIGIHCSDRSFTYRTVEQLHDPWVKRLFIGFARTSDF 1087

Query: 300  NGPGKPNEPHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLDI 359
            NGPGKPNEPHPLIQEIDSEIPVSQPALQLTY IFGSSPPMQSFDPAKLLTDSGKLQTLDI
Sbjct: 1088 NGPGKPNEPHPLIQEIDSEIPVSQPALQLTYGIFGSSPPMQSFDPAKLLTDSGKLQTLDI 1147

Query: 360  LLKHLRAENHRVLLFAQMTKMLNILEVFI-------LR-------------------RND 419
            LLK LRAENHR+LLFAQMTKMLNILE ++       LR                   RND
Sbjct: 1148 LLKRLRAENHRILLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVREFQLRND 1207

Query: 420  IFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVS 434
            IFVFLLSTRAGG GINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDV+
Sbjct: 1208 IFVFLLSTRAGGLGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVT 1259

[Close]

BLAST of CmaCh07G013400 vs. ExPASy TrEMBL
Match: A0A6J1EBE0 (Chromatin-remodeling ATPase INO80 OS=Cucurbita moschata OX=3662 GN=LOC111432477 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.2e-34
Identity = 87/118 (73.73%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 78  MTKRELRLVRKRRQSLNSEEEDD-GANDYYGTHATEERYRQMLGEHIKNYKRRSKHSSSP 137
           MTKREL LVRKRRQSLNSEEE+D GANDYYGTH TEERYRQMLGEHIKNYKRRSKH  SP
Sbjct: 1   MTKRELSLVRKRRQSLNSEEEEDHGANDYYGTHVTEERYRQMLGEHIKNYKRRSKH-PSP 60

Query: 138 MPARMGNSVSKAN-------------------EWLNDYNPHRPGIHHDPDFDPLRTPN 176
           MPARMGNSVSK N                   E  NDYNPHRPGIHHDPDF  L TPN
Sbjct: 61  MPARMGNSVSKGNSSLRARRSGSEQHEGFLEMETANDYNPHRPGIHHDPDFASLLTPN 117

HSP 2 Score: 129.0 bits (323), Expect = 4.8e-26
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 177 STMPVTSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH 236
           STMPVTSTVQTPELFKGSLK YQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH
Sbjct: 506 STMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH 565

Query: 237 LAEER 242
           LAE++
Sbjct: 566 LAEDK 570

HSP 3 Score: 305.4 bits (781), Expect = 3.8e-79
Identity = 171/232 (73.71%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 240  ERLQSNVGLLHTAYTFIPRIRAPPV--------FTAK-IEAL---LTKRLNNCMTLGSDF 299
            ERLQSNVGLLH AYTFIPRIRAPP+        FT + +E L     KRL       SDF
Sbjct: 1087 ERLQSNVGLLHAAYTFIPRIRAPPIGIHCSDRSFTYRTVEQLHDPWVKRLFIGFARTSDF 1146

Query: 300  NGPGKPNEPHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLDI 359
            NGPGKPNEPHPLIQEIDSEIPVSQPALQLTY IFGSSPPMQSFDPAKLLTDSGKLQTLDI
Sbjct: 1147 NGPGKPNEPHPLIQEIDSEIPVSQPALQLTYGIFGSSPPMQSFDPAKLLTDSGKLQTLDI 1206

Query: 360  LLKHLRAENHRVLLFAQMTKMLNILEVFI-------LR-------------------RND 419
            LLK LRAENHR+LLFAQMTKMLNILE ++       LR                   RND
Sbjct: 1207 LLKRLRAENHRILLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVREFQLRND 1266

Query: 420  IFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVS 434
            IFVFLLSTRAGG GINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDV+
Sbjct: 1267 IFVFLLSTRAGGLGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVT 1318

[Close]

BLAST of CmaCh07G013400 vs. ExPASy TrEMBL
Match: A0A6J1EEE8 (Chromatin-remodeling ATPase INO80 OS=Cucurbita moschata OX=3662 GN=LOC111432477 PE=3 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 2.9e-47
Identity = 116/179 (64.80%), Postives = 119/179 (66.48%), Query Frame = 0


Query: 17  LQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTSTTQGNG 76
           L+PLVNFQLPQPEDDF YYA                   +   D S     RT TTQGNG
Sbjct: 18  LEPLVNFQLPQPEDDFDYYA-------------------NSSHDESRDSPGRTITTQGNG 77

Query: 77  TMTKRELRLVRKRRQSLNSEEEDD-GANDYYGTHATEERYRQMLGEHIKNYKRRSKHSSS 136
           TMTKREL LVRKRRQSLNSEEE+D GANDYYGTH TEERYRQMLGEHIKNYKRRSKH  S
Sbjct: 78  TMTKRELSLVRKRRQSLNSEEEEDHGANDYYGTHVTEERYRQMLGEHIKNYKRRSKH-PS 137

Query: 137 PMPARMGNSVSKAN-------------------EWLNDYNPHRPGIHHDPDFDPLRTPN 176
           PMPARMGNSVSK N                   E  NDYNPHRPGIHHDPDF  L TPN
Sbjct: 138 PMPARMGNSVSKGNSSLRARRSGSEQHEGFLEMETANDYNPHRPGIHHDPDFASLLTPN 176

HSP 2 Score: 129.0 bits (323), Expect = 4.8e-26
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 177 STMPVTSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH 236
           STMPVTSTVQTPELFKGSLK YQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH
Sbjct: 565 STMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH 624

Query: 237 LAEER 242
           LAE++
Sbjct: 625 LAEDK 629

HSP 3 Score: 300.4 bits (768), Expect = 1.2e-77
Identity = 355/1327 (26.75%), Postives = 364/1327 (27.43%), Query Frame = 0


Query: 11   LRFWVLLQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTS 70
            L FWVLLQPLVNFQLPQPEDDF YYA                   +   D S     RT 
Sbjct: 18   LEFWVLLQPLVNFQLPQPEDDFDYYA-------------------NSSHDESRDSPGRTI 77

Query: 71   TTQGNGTMTKRELRLVRKRRQSLNSEEEDD-GANDYYGTHATEERYRQMLGEHIKNYKRR 130
            TTQGNGTMTKREL LVRKRRQSLNSEEE+D GANDYYGTH TEERYRQMLGEHIKNYKRR
Sbjct: 78   TTQGNGTMTKRELSLVRKRRQSLNSEEEEDHGANDYYGTHVTEERYRQMLGEHIKNYKRR 137

Query: 131  SKHSSSPMPARMGNSVSKAN-------------------EWLNDYNPHRPGIHHDPDFDP 190
            SKH  SPMPARMGNSVSK N                   E  NDYNPHRPGIHHDPDF  
Sbjct: 138  SKH-PSPMPARMGNSVSKGNSSLRARRSGSEQHEGFLEMETANDYNPHRPGIHHDPDFAS 197

Query: 191  LRTPN------------------------------------------------------- 250
            L TPN                                                       
Sbjct: 198  LLTPNRVIYEPAYLDIGDGIIYKIPPTYAKLAASLNLPSFSDIQVEEVYLEGTLDLGSLT 257

Query: 251  ------------------------------------------------------------ 310
                                                                        
Sbjct: 258  SMIADDKRFGNRSQAGMGDPRHQYESLQARLDALSASNSSQKFSLKVSDIGLNSSIPEGA 317

Query: 311  ------------------------------------------------------------ 370
                                                                        
Sbjct: 318  AGSIKRAILSEGGVLQIYYVKVLEKGDTYEIIERSLPKKQNVKKDPSVIEREEMEKIGKI 377

Query: 371  ------------------------------------------------------------ 430
                                                                        
Sbjct: 378  WVNIVRRDLPKHHRNFTAFHRKQLIDAKRFSEICQREVKMKVSRSLKMMRGAAIRTRKLA 437

Query: 431  ------------------------------------------------------------ 434
                                                                        
Sbjct: 438  RDMLLFWKRIDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQ 497

[Close]

BLAST of CmaCh07G013400 vs. ExPASy TrEMBL
Match: A0A6J1EAZ7 (Chromatin-remodeling ATPase INO80 OS=Cucurbita moschata OX=3662 GN=LOC111432477 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.2e-77
Identity = 355/1327 (26.75%), Postives = 364/1327 (27.43%), Query Frame = 0


Query: 11   LRFWVLLQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTS 70
            L FWVLLQPLVNFQLPQPEDDF YYA                   +   D S     RT 
Sbjct: 18   LEFWVLLQPLVNFQLPQPEDDFDYYA-------------------NSSHDESRDSPGRTI 77

Query: 71   TTQGNGTMTKRELRLVRKRRQSLNSEEEDD-GANDYYGTHATEERYRQMLGEHIKNYKRR 130
            TTQGNGTMTKREL LVRKRRQSLNSEEE+D GANDYYGTH TEERYRQMLGEHIKNYKRR
Sbjct: 78   TTQGNGTMTKRELSLVRKRRQSLNSEEEEDHGANDYYGTHVTEERYRQMLGEHIKNYKRR 137

Query: 131  SKHSSSPMPARMGNSVSKAN-------------------EWLNDYNPHRPGIHHDPDFDP 190
            SKH  SPMPARMGNSVSK N                   E  NDYNPHRPGIHHDPDF  
Sbjct: 138  SKH-PSPMPARMGNSVSKGNSSLRARRSGSEQHEGFLEMETANDYNPHRPGIHHDPDFAS 197

Query: 191  LRTPN------------------------------------------------------- 250
            L TPN                                                       
Sbjct: 198  LLTPNRVIYEPAYLDIGDGIIYKIPPTYAKLAASLNLPSFSDIQVEEVYLEGTLDLGSLT 257

Query: 251  ------------------------------------------------------------ 310
                                                                        
Sbjct: 258  SMIADDKRFGNRSQAGMGDPRHQYESLQARLDALSASNSSQKFSLKVSDIGLNSSIPEGA 317

Query: 311  ------------------------------------------------------------ 370
                                                                        
Sbjct: 318  AGSIKRAILSEGGVLQIYYVKVLEKGDTYEIIERSLPKKQNVKKDPSVIEREEMEKIGKI 377

Query: 371  ------------------------------------------------------------ 430
                                                                        
Sbjct: 378  WVNIVRRDLPKHHRNFTAFHRKQLIDAKRFSEICQREVKMKVSRSLKMMRGAAIRTRKLA 437

Query: 431  ------------------------------------------------------------ 434
                                                                        
Sbjct: 438  RDMLLFWKRIDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQ 497

[Close]

BLAST of CmaCh07G013400 vs. NCBI nr
Match: KAG7027645.1 (DNA helicase INO80, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.9 bits (964), Expect = 4.7e-100
Identity = 359/1156 (31.06%), Postives = 366/1156 (31.66%), Query Frame = 0


Query: 11   LRFWVLLQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTS 70
            L FWVLLQPLVNFQLPQPEDDF YYA                   +   D S     RT 
Sbjct: 96   LEFWVLLQPLVNFQLPQPEDDFDYYA-------------------NSSHDESRGSPGRTI 155

Query: 71   TTQGNGTMTKRELRLVRKRRQSLNSEEEDDGANDYYGTHATEERYRQMLGEHIKNYKRRS 130
            TTQGNGTMTKREL LVRKRRQSLNSEEEDDGANDYYGTH TEERYRQMLGEHIKNYKRRS
Sbjct: 156  TTQGNGTMTKRELSLVRKRRQSLNSEEEDDGANDYYGTHVTEERYRQMLGEHIKNYKRRS 215

Query: 131  KHSSSPMPARMGNSVSKAN-------------------EWLNDYNPHRPGIHHDPDFDPL 190
            KH SSPMPARMGNSVSK N                   E  NDYNPHRPGIHHDPDF  L
Sbjct: 216  KH-SSPMPARMGNSVSKGNSSLRARRSGSEQHEGFLEMETANDYNPHRPGIHHDPDFASL 275

Query: 191  RTPN-------------------------------------------------------- 250
            RTPN                                                        
Sbjct: 276  RTPNRVIYEPAYLDIGDGIIYKIPPTYDKLAASLNLPSFSDIQVEEVYLEGTLDLGSLAS 335

Query: 251  ------------------------------------------------------------ 310
                                                                        
Sbjct: 336  MIADDKRFGNRSQAGMGDPRHQYESLQARLDALSASNSSQKFSLKVSDIGLNSSIPEGAA 395

Query: 311  ------------------------------------------------------------ 370
                                                                        
Sbjct: 396  GSIKRAILSEGGMLQIYYVKVLEKGDTYEIIERSLPKKQNVKKDPSVIEREEMEKIGKIW 455

Query: 371  ------------------------------------------------------------ 430
                                                                        
Sbjct: 456  VNIVRRDLPKHHRNFTAFHRKQLIDAKRSLKMMRGAAIRTRKLARDMLLFWKRIDKEMAE 515

Query: 431  ------------------------------------------------------------ 434
                                                                        
Sbjct: 516  VRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSNLHPSEALPLGDE 575

[Close]

BLAST of CmaCh07G013400 vs. NCBI nr
Match: XP_023517690.1 (DNA helicase INO80-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.0 bits (798), Expect = 8.3e-81
Identity = 358/1326 (27.00%), Postives = 366/1326 (27.60%), Query Frame = 0


Query: 11   LRFWVLLQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTS 70
            L FWVL QPLVNFQLPQPEDDF YYA                   +   D S     RT 
Sbjct: 18   LEFWVLRQPLVNFQLPQPEDDFDYYA-------------------NSSHDESRGSPGRTI 77

Query: 71   TTQGNGTMTKRELRLVRKRRQSLNSEEEDDGANDYYGTHATEERYRQMLGEHIKNYKRRS 130
            TTQGNGTMTKREL LVRKRRQSLNSEEEDDGANDYYGTH TEERYRQMLGEHIK YKRRS
Sbjct: 78   TTQGNGTMTKRELSLVRKRRQSLNSEEEDDGANDYYGTHVTEERYRQMLGEHIKIYKRRS 137

Query: 131  KHSSSPMPARMGNSVSKAN-------------------EWLNDYNPHRPGIHHDPDFDPL 190
            KHSSSPMPARMGNSVSK N                   E  NDYNPHRPGI+HDPDF PL
Sbjct: 138  KHSSSPMPARMGNSVSKGNSSLRARRSGSEQHEGFLEMETANDYNPHRPGIYHDPDFAPL 197

Query: 191  RTPN-------------------------------------------------------- 250
            RTPN                                                        
Sbjct: 198  RTPNRVIYEPAYLDIGDGIIYKIPPTYDKLAASLNLPSFSDIQVEEVYLEGTLDLGSLAS 257

Query: 251  ------------------------------------------------------------ 310
                                                                        
Sbjct: 258  MIADDKRFGNRSQAGMGDPRHQYESLQARLDALSASNSSQKFSLKVSDIGLNSSIPEGAA 317

Query: 311  ------------------------------------------------------------ 370
                                                                        
Sbjct: 318  GSIKRAILSEGGVLQIYYVKVLEKGDTYEIIERSLPKKQNVKKDPSVIEREELEKIGKIW 377

Query: 371  ------------------------------------------------------------ 430
                                                                        
Sbjct: 378  VNIVRRDLPKHHRNFTAFHRKQLIDAKRFSEICQREVKMKVSRSLKMMRGVAIRTRKLAR 437

Query: 431  ------------------------------------------------------------ 434
                                                                        
Sbjct: 438  DMLLFWKRIDKEMAEVRKREEREAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQN 497

[Close]

BLAST of CmaCh07G013400 vs. NCBI nr
Match: KAG6595683.1 (Chromatin-remodeling ATPase INO80, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.8 bits (782), Expect = 6.0e-79
Identity = 172/233 (73.82%), Postives = 179/233 (76.82%), Query Frame = 0


Query: 239  EERLQSNVGLLHTAYTFIPRIRAPPV--------FTAK-IEAL---LTKRLNNCMTLGSD 298
            +ERLQSNVGLLH AYTFIPR RAPP+        FT + +E L     KRL       SD
Sbjct: 1164 QERLQSNVGLLHAAYTFIPRTRAPPIGIHCSDRSFTYQTVERLHDPWVKRLFIGFARTSD 1223

Query: 299  FNGPGKPNEPHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLD 358
            FNGPGKPNEPHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLD
Sbjct: 1224 FNGPGKPNEPHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLD 1283

Query: 359  ILLKHLRAENHRVLLFAQMTKMLNILEVFI-------LR-------------------RN 418
            ILLK LRAENHRVLLFAQMTKMLNILE ++       LR                   RN
Sbjct: 1284 ILLKRLRAENHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVREFQLRN 1343

Query: 419  DIFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVS 434
            DIFVFLLSTRAGG GINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDV+
Sbjct: 1344 DIFVFLLSTRAGGLGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVT 1396

[Close]

BLAST of CmaCh07G013400 vs. NCBI nr
Match: KAG6595683.1 (Chromatin-remodeling ATPase INO80, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 209.9 bits (533), Expect = 4.5e-50
Identity = 119/178 (66.85%), Postives = 121/178 (67.98%), Query Frame = 0


Query: 17  LQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTSTTQGNG 76
           L+PLVNFQLPQPEDDF YYA                   +   D S     RT TTQGNG
Sbjct: 96  LEPLVNFQLPQPEDDFDYYA-------------------NSSHDESRGSPGRTITTQGNG 155

Query: 77  TMTKRELRLVRKRRQSLNSEEEDDGANDYYGTHATEERYRQMLGEHIKNYKRRSKHSSSP 136
           TMTKREL LVRKRRQSLNSEEEDDGANDYYGTH TEERYRQMLGEHIKNYKRRSKH SSP
Sbjct: 156 TMTKRELSLVRKRRQSLNSEEEDDGANDYYGTHVTEERYRQMLGEHIKNYKRRSKH-SSP 215

Query: 137 MPARMGNSVSKAN-------------------EWLNDYNPHRPGIHHDPDFDPLRTPN 176
           MPARMGNSVSK N                   E  NDYNPHRPGIHHDPDF  LRTPN
Sbjct: 216 MPARMGNSVSKGNSSLRARRSGSEQHEGFLEMETANDYNPHRPGIHHDPDFASLRTPN 253

HSP 2 Score: 129.0 bits (323), Expect = 1.0e-25
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 177 STMPVTSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH 236
           STMPVTSTVQTPELFKGSLK YQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH
Sbjct: 642 STMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH 701

Query: 237 LAEER 242
           LAE++
Sbjct: 702 LAEDK 706

HSP 3 Score: 305.4 bits (781), Expect = 7.8e-79
Identity = 171/232 (73.71%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 240  ERLQSNVGLLHTAYTFIPRIRAPPV--------FTAK-IEAL---LTKRLNNCMTLGSDF 299
            ERLQSNVGLLH AYTFIPRIRAPP+        FT + +E L     KRL       SDF
Sbjct: 1028 ERLQSNVGLLHAAYTFIPRIRAPPIGIHCSDRSFTYRTVEQLHDPWVKRLFIGFARTSDF 1087

Query: 300  NGPGKPNEPHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLDI 359
            NGPGKPNEPHPLIQEIDSEIPVSQPALQLTY IFGSSPPMQSFDPAKLLTDSGKLQTLDI
Sbjct: 1088 NGPGKPNEPHPLIQEIDSEIPVSQPALQLTYGIFGSSPPMQSFDPAKLLTDSGKLQTLDI 1147

Query: 360  LLKHLRAENHRVLLFAQMTKMLNILEVFI-------LR-------------------RND 419
            LLK LRAENHR+LLFAQMTKMLNILE ++       LR                   RND
Sbjct: 1148 LLKRLRAENHRILLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVREFQLRND 1207

Query: 420  IFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVS 434
            IFVFLLSTRAGG GINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDV+
Sbjct: 1208 IFVFLLSTRAGGLGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVT 1259

[Close]

BLAST of CmaCh07G013400 vs. NCBI nr
Match: XP_022925146.1 (DNA helicase INO80-like isoform X5 [Cucurbita moschata])

HSP 1 Score: 156.8 bits (395), Expect = 4.5e-34
Identity = 87/118 (73.73%), Postives = 88/118 (74.58%), Query Frame = 0


Query: 78  MTKRELRLVRKRRQSLNSEEEDD-GANDYYGTHATEERYRQMLGEHIKNYKRRSKHSSSP 137
           MTKREL LVRKRRQSLNSEEE+D GANDYYGTH TEERYRQMLGEHIKNYKRRSKH  SP
Sbjct: 1   MTKRELSLVRKRRQSLNSEEEEDHGANDYYGTHVTEERYRQMLGEHIKNYKRRSKH-PSP 60

Query: 138 MPARMGNSVSKAN-------------------EWLNDYNPHRPGIHHDPDFDPLRTPN 176
           MPARMGNSVSK N                   E  NDYNPHRPGIHHDPDF  L TPN
Sbjct: 61  MPARMGNSVSKGNSSLRARRSGSEQHEGFLEMETANDYNPHRPGIHHDPDFASLLTPN 117

HSP 2 Score: 129.0 bits (323), Expect = 1.0e-25
Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 177 STMPVTSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH 236
           STMPVTSTVQTPELFKGSLK YQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH
Sbjct: 506 STMPVTSTVQTPELFKGSLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAH 565

Query: 237 LAEER 242
           LAE++
Sbjct: 566 LAEDK 570

HSP 3 Score: 305.4 bits (781), Expect = 7.8e-79
Identity = 171/232 (73.71%), Postives = 178/232 (76.72%), Query Frame = 0


Query: 240  ERLQSNVGLLHTAYTFIPRIRAPPV--------FTAK-IEAL---LTKRLNNCMTLGSDF 299
            ERLQSNVGLLH AYTFIPRIRAPP+        FT + +E L     KRL       SDF
Sbjct: 1087 ERLQSNVGLLHAAYTFIPRIRAPPIGIHCSDRSFTYRTVEQLHDPWVKRLFIGFARTSDF 1146

Query: 300  NGPGKPNEPHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQSFDPAKLLTDSGKLQTLDI 359
            NGPGKPNEPHPLIQEIDSEIPVSQPALQLTY IFGSSPPMQSFDPAKLLTDSGKLQTLDI
Sbjct: 1147 NGPGKPNEPHPLIQEIDSEIPVSQPALQLTYGIFGSSPPMQSFDPAKLLTDSGKLQTLDI 1206

Query: 360  LLKHLRAENHRVLLFAQMTKMLNILEVFI-------LR-------------------RND 419
            LLK LRAENHR+LLFAQMTKMLNILE ++       LR                   RND
Sbjct: 1207 LLKRLRAENHRILLFAQMTKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVREFQLRND 1266

Query: 420  IFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVS 434
            IFVFLLSTRAGG GINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDV+
Sbjct: 1267 IFVFLLSTRAGGLGINLTAADTVIFYENDWNPTLDLQAMDRAHRLGQTKDVT 1318

[Close]

BLAST of CmaCh07G013400 vs. TAIR 10
Match: AT3G57300.1 (INO80 ortholog )

HSP 1 Score: 264.6 bits (675), Expect = 1.4e-70
Identity = 151/251 (60.16%), Postives = 170/251 (67.73%), Query Frame = 0


Query: 222  MGLGKTIQAMVFLAHLAEERLQSNVGLLHTAYTFIPRIRAPPV------------FTAKI 281
            +  G T  +   L    ++R  S++ LLH+AYT+IP+ RAPPV             T ++
Sbjct: 1075 LSTGPTRPSFEALVISHQDRFLSSIKLLHSAYTYIPKARAPPVSIHCSDRNSAYRVTEEL 1134

Query: 282  EALLTKRLNNCMTLGSDFNGPGKPNE-PHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQ 341
                 KRL       S+ NGP KPN  PHPLIQEIDSE+PV QPALQLT+ IFGS PPMQ
Sbjct: 1135 HQPWLKRLLIGFARTSEANGPRKPNSFPHPLIQEIDSELPVVQPALQLTHRIFGSCPPMQ 1194

Query: 342  SFDPAKLLTDSGKLQTLDILLKHLRAENHRVLLFAQMTKMLNILEVFI------------ 401
            SFDPAKLLTDSGKLQTLDILLK LRA NHRVLLFAQMTKMLNILE ++            
Sbjct: 1195 SFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDG 1254

Query: 402  --------------LRRNDIFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDR 434
                            R+DIFVFLLSTRAGG GINLTAADTVIFYE+DWNPTLDLQAMDR
Sbjct: 1255 SSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDR 1314

HSP 2 Score: 128.6 bits (322), Expect = 1.2e-29
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 175 NSSTMPVTSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFL 234
           N STMPVTSTVQTPELFKG+LK YQ+KGLQWLVNCYEQGLNGILADEMGLGKTIQAM FL
Sbjct: 566 NPSTMPVTSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFL 625

Query: 235 AHLAEER 242
           AHLAEE+
Sbjct: 626 AHLAEEK 632

HSP 3 Score: 70.1 bits (170), Expect = 5.1e-12
Identity = 51/178 (28.65%), Postives = 75/178 (42.13%), Query Frame = 0


Query: 17  LQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTSTTQGNG 76
           L+PL+ F++P+PED+  YY                    S   D S + +        NG
Sbjct: 19  LEPLMKFRIPKPEDEVDYYG-------------------SSSQDESRSTQGGVVANYSNG 78

Query: 77  TMTKRELRLVRKRRQSLNSEEEDDGANDYYGTHATEERYRQMLGEHIKNYKRRSKHSSSP 136
           + ++      +++R +   + EDD  +D Y  H TEE YR MLGEH++ +K RSK +   
Sbjct: 79  SKSRMNASSKKRKRWTEAEDAEDD--DDLYNQHVTEEHYRSMLGEHVQKFKNRSKETQGN 138

Query: 137 MPARMGNSVSKAN------------------------EWLNDYNPHRPGIHHDPDFDP 171
            P  MG  V K+N                         +  D  PHR G +HD D  P
Sbjct: 139 PPHLMGFPVLKSNVGSYRGRKPGNDYHGRFYDMDNSPNFAADVTPHRRGSYHDRDITP 175

[Close]

BLAST of CmaCh07G013400 vs. TAIR 10
Match: AT3G57300.2 (INO80 ortholog )

HSP 1 Score: 264.6 bits (675), Expect = 1.4e-70
Identity = 151/251 (60.16%), Postives = 170/251 (67.73%), Query Frame = 0


Query: 222  MGLGKTIQAMVFLAHLAEERLQSNVGLLHTAYTFIPRIRAPPV------------FTAKI 281
            +  G T  +   L    ++R  S++ LLH+AYT+IP+ RAPPV             T ++
Sbjct: 1108 LSTGPTRPSFEALVISHQDRFLSSIKLLHSAYTYIPKARAPPVSIHCSDRNSAYRVTEEL 1167

Query: 282  EALLTKRLNNCMTLGSDFNGPGKPNE-PHPLIQEIDSEIPVSQPALQLTYSIFGSSPPMQ 341
                 KRL       S+ NGP KPN  PHPLIQEIDSE+PV QPALQLT+ IFGS PPMQ
Sbjct: 1168 HQPWLKRLLIGFARTSEANGPRKPNSFPHPLIQEIDSELPVVQPALQLTHRIFGSCPPMQ 1227

Query: 342  SFDPAKLLTDSGKLQTLDILLKHLRAENHRVLLFAQMTKMLNILEVFI------------ 401
            SFDPAKLLTDSGKLQTLDILLK LRA NHRVLLFAQMTKMLNILE ++            
Sbjct: 1228 SFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQMTKMLNILEDYMNYRKYKYLRLDG 1287

Query: 402  --------------LRRNDIFVFLLSTRAGGFGINLTAADTVIFYENDWNPTLDLQAMDR 434
                            R+DIFVFLLSTRAGG GINLTAADTVIFYE+DWNPTLDLQAMDR
Sbjct: 1288 SSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDR 1347

HSP 2 Score: 128.6 bits (322), Expect = 1.2e-29
Identity = 61/67 (91.04%), Postives = 64/67 (95.52%), Query Frame = 0


Query: 175 NSSTMPVTSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFL 234
           N STMPVTSTVQTPELFKG+LK YQ+KGLQWLVNCYEQGLNGILADEMGLGKTIQAM FL
Sbjct: 566 NPSTMPVTSTVQTPELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFL 625

Query: 235 AHLAEER 242
           AHLAEE+
Sbjct: 626 AHLAEEK 632

HSP 3 Score: 70.1 bits (170), Expect = 5.1e-12
Identity = 51/178 (28.65%), Postives = 75/178 (42.13%), Query Frame = 0


Query: 17  LQPLVNFQLPQPEDDFHYYALIVVMMRAEVAQVHVFVIKSVISDSSPTCKCRTSTTQGNG 76
           L+PL+ F++P+PED+  YY                    S   D S + +        NG
Sbjct: 19  LEPLMKFRIPKPEDEVDYYG-------------------SSSQDESRSTQGGVVANYSNG 78

Query: 77  TMTKRELRLVRKRRQSLNSEEEDDGANDYYGTHATEERYRQMLGEHIKNYKRRSKHSSSP 136
           + ++      +++R +   + EDD  +D Y  H TEE YR MLGEH++ +K RSK +   
Sbjct: 79  SKSRMNASSKKRKRWTEAEDAEDD--DDLYNQHVTEEHYRSMLGEHVQKFKNRSKETQGN 138

Query: 137 MPARMGNSVSKAN------------------------EWLNDYNPHRPGIHHDPDFDP 171
            P  MG  V K+N                         +  D  PHR G +HD D  P
Sbjct: 139 PPHLMGFPVLKSNVGSYRGRKPGNDYHGRFYDMDNSPNFAADVTPHRRGSYHDRDITP 175

[Close]

BLAST of CmaCh07G013400 vs. TAIR 10
Match: AT3G06400.1 (chromatin-remodeling protein 11 )

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-25
Identity = 111/436 (25.46%), Postives = 158/436 (36.24%), Query Frame = 0


Query: 182 TSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAEER 241
           T  +  P   +G ++ YQL GL WL+  YE G+NGILADEMGLGKT+Q +  LA+L E R
Sbjct: 176 TRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235

Query: 242 ------------------------------------------------------------ 301
                                                                       
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTS 295

Query: 302 ---------------------------------LQSNVGLLHTAYTFIPRIRAPPV---- 361
                                            L   + L  T Y  +  I   P+    
Sbjct: 296 FEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL--ITGTPLQNNL 355

Query: 362 --FTAKIEALLTKRLNNCMTLGSDFNGPGKPNEPHP-----------LIQEIDSEIPVSQ 421
               A +  LL +  ++  T    F   G+ ++              L++ + S++    
Sbjct: 356 HELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGL 415

Query: 422 P------------------------------------------ALQL------TYSIFGS 433
           P                                          A+QL       Y   G+
Sbjct: 416 PPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGA 475

[Close]

BLAST of CmaCh07G013400 vs. TAIR 10
Match: AT3G06400.3 (chromatin-remodeling protein 11 )

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-25
Identity = 111/436 (25.46%), Postives = 158/436 (36.24%), Query Frame = 0


Query: 182 TSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAEER 241
           T  +  P   +G ++ YQL GL WL+  YE G+NGILADEMGLGKT+Q +  LA+L E R
Sbjct: 176 TRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235

Query: 242 ------------------------------------------------------------ 301
                                                                       
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTS 295

Query: 302 ---------------------------------LQSNVGLLHTAYTFIPRIRAPPV---- 361
                                            L   + L  T Y  +  I   P+    
Sbjct: 296 FEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL--ITGTPLQNNL 355

Query: 362 --FTAKIEALLTKRLNNCMTLGSDFNGPGKPNEPHP-----------LIQEIDSEIPVSQ 421
               A +  LL +  ++  T    F   G+ ++              L++ + S++    
Sbjct: 356 HELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGL 415

Query: 422 P------------------------------------------ALQL------TYSIFGS 433
           P                                          A+QL       Y   G+
Sbjct: 416 PPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGA 475

[Close]

BLAST of CmaCh07G013400 vs. TAIR 10
Match: AT3G06400.2 (chromatin-remodeling protein 11 )

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-25
Identity = 111/436 (25.46%), Postives = 158/436 (36.24%), Query Frame = 0


Query: 182 TSTVQTPELFKGSLKAYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMVFLAHLAEER 241
           T  +  P   +G ++ YQL GL WL+  YE G+NGILADEMGLGKT+Q +  LA+L E R
Sbjct: 176 TRLLTQPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYR 235

Query: 242 ------------------------------------------------------------ 301
                                                                       
Sbjct: 236 GINGPHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIREDLLVAGKFDICVTS 295

Query: 302 ---------------------------------LQSNVGLLHTAYTFIPRIRAPPV---- 361
                                            L   + L  T Y  +  I   P+    
Sbjct: 296 FEMAIKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLL--ITGTPLQNNL 355

Query: 362 --FTAKIEALLTKRLNNCMTLGSDFNGPGKPNEPHP-----------LIQEIDSEIPVSQ 421
               A +  LL +  ++  T    F   G+ ++              L++ + S++    
Sbjct: 356 HELWALLNFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGL 415

Query: 422 P------------------------------------------ALQL------TYSIFGS 433
           P                                          A+QL       Y   G+
Sbjct: 416 PPKKETILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGA 475

The following BLAST results are available for this feature:

BLAST of CmaCh07G013400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8RXS6	2.0e-69	60.16	Chromatin-remodeling ATPase INO80 OS=Arabidopsis thaliana OX=3702 GN=INO80 PE=2 ...	[more]
Q2UTQ9	1.7e-31	42.31	Chromatin-remodeling ATPase INO80 OS=Aspergillus oryzae (strain ATCC 42149 / RIB...	[more]
Q5BAZ5	1.7e-31	42.51	Chromatin-remodeling ATPase INO80 OS=Emericella nidulans (strain FGSC A4 / ATCC ...	[more]
Q9ULG1	3.7e-31	56.00	Chromatin-remodeling ATPase INO80 OS=Homo sapiens OX=9606 GN=INO80 PE=1 SV=2	[more]
Q6ZPV2	4.8e-31	56.00	Chromatin-remodeling ATPase INO80 OS=Mus musculus OX=10090 GN=Ino80 PE=1 SV=2	[more]

BLAST of CmaCh07G013400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EH30	3.8e-79	73.71	Chromatin-remodeling ATPase INO80 OS=Cucurbita moschata OX=3662 GN=LOC111432477 ...	[more]
A0A6J1EH30	2.9e-47	64.80	Chromatin-remodeling ATPase INO80 OS=Cucurbita moschata OX=3662 GN=LOC111432477 ...	[more]
A0A6J1EBE0	2.2e-34	73.73	Chromatin-remodeling ATPase INO80 OS=Cucurbita moschata OX=3662 GN=LOC111432477 ...	[more]
A0A6J1EEE8	2.9e-47	64.80	Chromatin-remodeling ATPase INO80 OS=Cucurbita moschata OX=3662 GN=LOC111432477 ...	[more]
A0A6J1EAZ7	1.2e-77	26.75	Chromatin-remodeling ATPase INO80 OS=Cucurbita moschata OX=3662 GN=LOC111432477 ...	[more]

BLAST of CmaCh07G013400 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7027645.1	4.7e-100	31.06	DNA helicase INO80, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023517690.1	8.3e-81	27.00	DNA helicase INO80-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG6595683.1	6.0e-79	73.82	Chromatin-remodeling ATPase INO80, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6595683.1	4.5e-50	66.85	Chromatin-remodeling ATPase INO80, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022925146.1	4.5e-34	73.73	DNA helicase INO80-like isoform X5 [Cucurbita moschata]	[more]

Pages

BLAST of CmaCh07G013400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57300.1	1.4e-70	60.16	INO80 ortholog	[more]
AT3G57300.2	1.4e-70	60.16	INO80 ortholog	[more]
AT3G06400.1	1.4e-25	25.46	chromatin-remodeling protein 11	[more]
AT3G06400.3	1.4e-25	25.46	chromatin-remodeling protein 11	[more]
AT3G06400.2	1.4e-25	25.46	chromatin-remodeling protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 346..427 e-value: 3.8E-14 score: 63.0
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 379..427 e-value: 6.5E-8 score: 32.9
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 325..447 score: 10.553744
IPR000330	SNF2, N-terminal	PFAM	PF00176	SNF2_N	coord: 204..238 e-value: 1.8E-7 score: 30.2
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 379..438 e-value: 7.8E-29 score: 102.6 coord: 311..378 e-value: 5.7E-12 score: 47.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 174..245
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 332..434
IPR038718	SNF2-like, N-terminal domain superfamily	GENE3D	3.40.50.10810		coord: 172..258 e-value: 3.5E-22 score: 80.4
IPR031047	DNA helicase Ino80	PANTHER	PTHR45685:SF2	CHROMATIN-REMODELING ATPASE INO80	coord: 174..240
IPR031047	DNA helicase Ino80	PANTHER	PTHR45685:SF2	CHROMATIN-REMODELING ATPASE INO80	coord: 240..433
None	No IPR available	PANTHER	PTHR45685	HELICASE SRCAP-RELATED	coord: 174..240 coord: 240..433
None	No IPR available	CDD	cd18793	SF2_C_SNF	coord: 332..432 e-value: 3.40507E-44 score: 149.164

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G013400.1	CmaCh07G013400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0042766	nucleosome mobilization
biological_process	GO:0043618	regulation of transcription from RNA polymerase II promoter in response to stress
biological_process	GO:0006338	chromatin remodeling
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0031011	Ino80 complex
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0140658	ATP-dependent chromatin remodeler activity
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0042393	histone binding