CmaCh07G013340 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G013340
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Transcription initiation factor IIB
Location	Cma_Chr07: 7569733 .. 7573559 (+)
RNA-Seq Expression	CmaCh07G013340
Synteny	CmaCh07G013340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGATGCGTTCTGCTCCGACTGCAAGCGTCAGACGGAGGTTGTCTTCGATCACTCTCCCGGAGACACCATGCGCTCTGAGTGCGGCCTTGTGCTCGAGTCGCACTCCATCGATGAGACCTCCGAGTGGAGGACTTTTGCCAATGAGTCTGGGGATAACGACCCGGTTCGTGTTGGTGGACCGTCCAACCCGCTTTTGGCTGACGGTGGCCTTTCCACGGTGATTGCCAAGCCTAATGGTACGGCCGGGGAGTTCTTGTCCTCGTCATTAGGTCGGTGGCAGAATCGTGGGTCTAATCCAGATCGAGGGTTGATTCTTGCATTCAAGACAATTGCTACTATGTCTGATAGGTAAGGGGGTTGGTTGTTTTGATCGTTTTTTGGATGCTGAGGAAACATGGAATTAGTTAAATTTCTTTGTATTTAACTAAATCGTAATGTTAAACCGATCGAATTGGAATGGTGGAAGGTGGGAATTGGAAACTCTTAGTAGTTTGATGATTTTTGTGTTCGTGGGGGAACTTTTGATGATGGATACTAAATTAGGGTATTTCAACTCTCAAGTCTGGATTCAATTAGGTCAATTTTTCTTGTTGCTTTGGAATTTGAAGGGTTTCTTCATTATGGGGGCAGCCTCTTCTCTCTAATGGGATTTTAAAACTGATAAACTTAATGCTAATCATTCCATCTAGTGTTTGATAGTTTTATAATTGGCCTTGCCTCATGATCATGATTCTTTTTATGATTTTGTTTTCTTATTTTCATGCATTTTGTGATTGAGCTGCTTGTTTACAAGTGTCCTAGCTTTGATGATAACAATCTGAGACTAATATATAATGCTTAATGAAGTCATTGTTGTACCCAAAGCTCAGATGCTACTTGTTGTGTCATAATGCCATGATATCCAATTGTTGTACCGGAAGCCATAACCAAAATGCTTTGATACCCAATTGTTGTAGCGTAATACCGAAACCAAAAATGCTTTGATACCCAATTGTTGTAGCGAAATACCGGAACAAAAAATGTTTGATACCCAATTGTTGTAGCGAAATATCAAAACCAAAAATGCTTTGATACCCATTGTTGTAGCGAAATACCGAAACAAAAAATGATTTGATACCCAATTGTTGTAGTGAAATAACGAAACCAGATACCCAATTGTTGTAACGAAATACCGAAACCAAAAATGCTCTGATACCCCGTTGTTGTACCAAAAGCAGAAGCAAGATTGATCGCACTCACACATCCACAAACAGAAATTAAACAAAGAGATATAAAGATTTACGTGGTTCGGAGAGAAGAAATTCCCTTAACCAAAGTGTTTACAAAGTGTATTTTTCACACTCTCACACTACAAGACAATAGTTTTTTTAGCTAGAGTGCTATTTGTTTGGTTGTGGCTTTCGCTACACCAGTTGGGTATCAAAGCATTTTTTGATTGTGGCATTCCGCTACAACACTTGGATATCAGAACATCTTTTGTTGTGGCATTATGGCACAACAAGTGGTATCAGAGCTGGTACAGCTGGTACAACAGTCATGAGTTTGCATATTTTGTTAAATTGTGCCTTTTGTTTTAGTTCAGCTCCTCTTCATGGGCCATTTTCTTTTTATGCCCTTTGTTTTCTTTCATCTTTCTCAACAAAACTTGGCATTTAATCAACAAAAGAAAGAAAAAGAAAAGGTCACGCATGACTAATGTTAGCTGTAATGTGTTTCAGGTTGGGCCTTGTTGCAACCATTAAGGTATGCAATTTTCCATCCATTATGACAAAATGACACGAGTTACCATTTCTTGTATTTTCTCAAAGCATTCAGGTTAGTTGTCAGTATAGAATGATCATGCTGTATTGTCAAGGTTGTAAATAATGTATTTTTCACCGTTTGCGTTATACTTTGGTTCTGGAATTGATGCACGATGAATAATTCTAAGAACAAAATAGTTTTAGATTCGAAGACCACAATAGTTTTAGATTTTGTTTTTGAGTTCCATTCATTTCACTAGCATTGAGCCTTGGTATTTTGTAAATGTTTTGTTCATAGGATCGGGCGAATGAGATATATAAAAGAGTTGAAGATCAAAAGTCTAGTAGAGGAAGAAATCAAGATGCTTTATTGGCTGCTTGCTTATACATTGCTTGTCGACAAGAAGACAAACCCCGCACAGTTAAGGGTACTGCTTGTAAATCATTTGATATCTGGAGCATTTGTAGTTAAGATTTCTCTTCTTTACCTAATCATGCTGGTTTTGAGTAGAAATTTGCTCTGTTGCTAATGGGGCAACAAAGAAGGAGATTGGCCGAGCAAAAGAATACATCGTGAAACAGTTGGGGTTGGAGACGGGTCAGTCTGTGGAGATGGGAACGATACATGCTGGAAACTTTATGGTGAGAATATCAACTTAATTATTTTAAAGTTCGATCACGGATAATGTTGTGTTATTCTTCTGACATCAAGTTTCTTTCCTAAATGAACATAGAGGCGTTTTTGTTCTAATCTTGGCATGAATAATCAAGCTGTTAAAGCTGCCCAAGAAGCTGTACAGAAATCTGAAGAGTTCGATATTAGGTAACGATTTGGACATGATGAATTTCTTTCTTTGCTTTTATAGTTATTTGTTTGGCTGGTTTGATAAGTGTTCACTCAACTTCGATGACATCTGCCCCGTACACATACCTCTTCTGGCCAACTTCGACGAAATCTGCAGTGCCTAAGTAGTATTGATATCCACTGGCCTAGCTAAGTAACTGCTTGGTTGAATCCCTTGTTCTTTAACATATAATTTGATTGATCGATTTATCCTCAGCTTATCAAACTGTTTGAATGTATGCTTAGATTAGAAAACATTGGATAAAGTTTTGAATAAGCTTGGGGACAGGATTATTGTTGGTTCACTTTTTTCTTAAAGAGGATTTTCTTCCCTCATTTCAGGAGAAGCCCAATATCCATTGCTGCAGCAGTTATTTACATTATTACTCAGCTTTCAGATGATAAGAAGCCTCTAAAAGGTAATGTTTGACTGTGGCTATAATCTTCACTACATCATATATGTTCATAATCTGTTCATTTGGGCATGTTTGTTTGATAATGACTCTGTTATTTGATTATGAAAGTTATGGTTTTCTCCTTGAAACAAAACTAGACCCGTTCTCCCGAGCATTGTTGTCGTCAGTCTTGATATGAAATTTAATCAAGGGATTTGAGTTTTACAGACATATCGGTAGCTACCGGTGTTGCGGAAGGGACGATCAGAAACTCGTATAAAGATCTGTACCCGCATGTTTCGAAGATAATACCGGGGTGGTATGCTAAAGAGGAGGATCTTAAGAACCTGTGCAGTCCTTGAAATGTAACTGAAGTTGGAATTAGTTTTTTTGAGGCTTGTGTATTTAAACTCTTTGAGATTACAAAGAGAGGTAGAATGAAAATGTCCCCCTTCCCTGCTTTTTTCTCTTTTTCCTTAATATGCTATGACCTAGGTCATGTGGAATTGTTGTTCAATGAGTAGATAGATGCGTTTTAAAAACTTTTGAGGAGAATGTCCGAAAGGGAAAGTCCGAAGAGGACCGTATCTGTTAGCGGTGGGTTTGAGTTGCTATAATATGCTTGCATGTTCCAGTAGGTGGGTGGACACGAGGTGGTGTGCCAGCAAGAATGTTGACTTCCAAAGGGGGTTCCCACATTTGCTAGAGAGGATGCTGAGCTCTGAAAGGGAGTAGACACGAGGCAGTGTGCCAACAAGGACGCTGGGTCTTGAAGGGTGGACGAGTGCCAGCGAGGATATTGGACTCCCGAAACGGGATAGACACGAGGCAGTGTGCCAAC

mRNA sequence

ATGTCCGATGCGTTCTGCTCCGACTGCAAGCGTCAGACGGAGGTTGTCTTCGATCACTCTCCCGGAGACACCATGCGCTCTGAGTGCGGCCTTGTGCTCGAGTCGCACTCCATCGATGAGACCTCCGAGTGGAGGACTTTTGCCAATGAGTCTGGGGATAACGACCCGGTTCGTGTTGGTGGACCGTCCAACCCGCTTTTGGCTGACGGTGGCCTTTCCACGGTGATTGCCAAGCCTAATGGTACGGCCGGGGAGTTCTTGTCCTCGTCATTAGGTCGGTGGCAGAATCGTGGGTCTAATCCAGATCGAGGGTTGATTCTTGCATTCAAGACAATTGCTACTATGTCTGATAGGTTGGGCCTTGTTGCAACCATTAAGGATCGGGCGAATGAGATATATAAAAGAGTTGAAGATCAAAAGTCTAGTAGAGGAAGAAATCAAGATGCTTTATTGGCTGCTTGCTTATACATTGCTTGTCGACAAGAAGACAAACCCCGCACAGTTAAGGAAATTTGCTCTGTTGCTAATGGGGCAACAAAGAAGGAGATTGGCCGAGCAAAAGAATACATCGTGAAACAGTTGGGGTTGGAGACGGGTCAGTCTGTGGAGATGGGAACGATACATGCTGGAAACTTTATGAGGCGTTTTTGTTCTAATCTTGGCATGAATAATCAAGCTGTTAAAGCTGCCCAAGAAGCTGTACAGAAATCTGAAGAGTTCGATATTAGGAGAAGCCCAATATCCATTGCTGCAGCAGTTATTTACATTATTACTCAGCTTTCAGATGATAAGAAGCCTCTAAAAGACATATCGGTAGCTACCGGTGTTGCGGAAGGGACGATCAGAAACTCGTATAAAGATCTGTACCCGCATGTTTCGAAGATAATACCGGGGTGGTATGCTAAAGAGGAGGATCTTAAGAACCTGTGCAGTCCTTGAAATGTAACTGAAGTTGGAATTAGTTTTTTTGAGGCTTGTGTATTTAAACTCTTTGAGATTACAAAGAGAGGTAGAATGAAAATGTCCCCCTTCCCTGCTTTTTTCTCTTTTTCCTTAATATGCTATGACCTAGGTCATGTGGAATTGTTGTTCAATGAGTAGATAGATGCGTTTTAAAAACTTTTGAGGAGAATGTCCGAAAGGGAAAGTCCGAAGAGGACCGTATCTGTTAGCGGTGGGTTTGAGTTGCTATAATATGCTTGCATGTTCCAGTAGGTGGGTGGACACGAGGTGGTGTGCCAGCAAGAATGTTGACTTCCAAAGGGGGTTCCCACATTTGCTAGAGAGGATGCTGAGCTCTGAAAGGGAGTAGACACGAGGCAGTGTGCCAACAAGGACGCTGGGTCTTGAAGGGTGGACGAGTGCCAGCGAGGATATTGGACTCCCGAAACGGGATAGACACGAGGCAGTGTGCCAAC

Coding sequence (CDS)

ATGTCCGATGCGTTCTGCTCCGACTGCAAGCGTCAGACGGAGGTTGTCTTCGATCACTCTCCCGGAGACACCATGCGCTCTGAGTGCGGCCTTGTGCTCGAGTCGCACTCCATCGATGAGACCTCCGAGTGGAGGACTTTTGCCAATGAGTCTGGGGATAACGACCCGGTTCGTGTTGGTGGACCGTCCAACCCGCTTTTGGCTGACGGTGGCCTTTCCACGGTGATTGCCAAGCCTAATGGTACGGCCGGGGAGTTCTTGTCCTCGTCATTAGGTCGGTGGCAGAATCGTGGGTCTAATCCAGATCGAGGGTTGATTCTTGCATTCAAGACAATTGCTACTATGTCTGATAGGTTGGGCCTTGTTGCAACCATTAAGGATCGGGCGAATGAGATATATAAAAGAGTTGAAGATCAAAAGTCTAGTAGAGGAAGAAATCAAGATGCTTTATTGGCTGCTTGCTTATACATTGCTTGTCGACAAGAAGACAAACCCCGCACAGTTAAGGAAATTTGCTCTGTTGCTAATGGGGCAACAAAGAAGGAGATTGGCCGAGCAAAAGAATACATCGTGAAACAGTTGGGGTTGGAGACGGGTCAGTCTGTGGAGATGGGAACGATACATGCTGGAAACTTTATGAGGCGTTTTTGTTCTAATCTTGGCATGAATAATCAAGCTGTTAAAGCTGCCCAAGAAGCTGTACAGAAATCTGAAGAGTTCGATATTAGGAGAAGCCCAATATCCATTGCTGCAGCAGTTATTTACATTATTACTCAGCTTTCAGATGATAAGAAGCCTCTAAAAGACATATCGGTAGCTACCGGTGTTGCGGAAGGGACGATCAGAAACTCGTATAAAGATCTGTACCCGCATGTTTCGAAGATAATACCGGGGTGGTATGCTAAAGAGGAGGATCTTAAGAACCTGTGCAGTCCTTGA

Protein sequence

MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWYAKEEDLKNLCSP

Homology

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BLAST of CmaCh07G013340 vs. ExPASy Swiss-Prot
Match: Q9SS44 (Transcription initiation factor IIB-2 OS=Arabidopsis thaliana OX=3702 GN=TFIIB2 PE=2 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 2.1e-166
Identity = 290/312 (92.95%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKR TEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLLADGGL+TVI+KPNG++G+FLSSSLGRWQNRGSNPDRGLI+AFKTIATM+DRLG
Sbjct: 61  GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQ VEMGTIHAG+FMRRFCSNLGM NQ VKAAQE+VQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSD+KKPL+DISVATGVAEGTIRNSYKDLYPH+SKIIP WY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNL SP
Sbjct: 301 AKEEDLKNLQSP 312

[Close]

BLAST of CmaCh07G013340 vs. ExPASy Swiss-Prot
Match: P48513 (Transcription initiation factor IIB OS=Glycine max OX=3847 GN=TFIIB1 PE=2 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 2.1e-166
Identity = 296/313 (94.57%), Postives = 300/313 (95.85%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDP RVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPN-GTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRL 120
           GPSNPLL DGGLSTVIAKPN G  GEFLSSSLGRWQNRGSNPDR LI AFKTIATMSDRL
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGGGGGEFLSSSLGRWQNRGSNPDRALIQAFKTIATMSDRL 120

Query: 121 GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 180
           GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT
Sbjct: 121 GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT 180

Query: 181 KKEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEE 240
           KKEIGRAKEYIVKQLGLE G +VEMGTIHAG+FMRRFCSNL MNNQAVKAAQEAVQKSEE
Sbjct: 181 KKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEAVQKSEE 240

Query: 241 FDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGW 300
           FDIRRSPISIAAAVIYIITQLSDDKKPLKDIS+ATGVAEGTIRNSYKDLYPHVSKIIP W
Sbjct: 241 FDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNW 300

Query: 301 YAKEEDLKNLCSP 313
           YAKEEDLKNLCSP
Sbjct: 301 YAKEEDLKNLCSP 313

[Close]

BLAST of CmaCh07G013340 vs. ExPASy Swiss-Prot
Match: Q8W0W3 (Transcription initiation factor IIB OS=Oryza sativa subsp. japonica OX=39947 GN=TFIIB PE=1 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 2.8e-155
Identity = 268/312 (85.90%), Postives = 292/312 (93.59%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSD+FC DCK+ TEV FDHS GDT+ +ECGLVLE+HS+DETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLL DGGLSTVIAKPNG  GEFLSSSLGRWQNRGSNPDR LILAF+TIA M+DRLG
Sbjct: 61  GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYK+VED KS RGRNQDA+LAACLYIACRQED+PRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKE+IVKQL +E GQS+EMGTIHAG+F+RRFCS LGMNNQAVKAAQEAVQ+SEE 
Sbjct: 181 KEIGRAKEFIVKQLEVEMGQSMEMGTIHAGDFLRRFCSTLGMNNQAVKAAQEAVQRSEEL 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIY+ITQLSDDKKPLKDIS+ATGVAEGTIRNSYKDLYP+ S++IP  Y
Sbjct: 241 DIRRSPISIAAAVIYMITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPYASRLIPNTY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLC+P
Sbjct: 301 AKEEDLKNLCTP 312

[Close]

BLAST of CmaCh07G013340 vs. ExPASy Swiss-Prot
Match: P48512 (Transcription initiation factor IIB-1 OS=Arabidopsis thaliana OX=3702 GN=TFIIB1 PE=1 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 7.7e-153
Identity = 266/312 (85.26%), Postives = 290/312 (92.95%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDA+C+DCK++TE+V DHS GDT+ SECGLVLESHSIDETSEWRTFANES ++DP RVG
Sbjct: 1   MSDAYCTDCKKETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLLAD  L+TVIAKPNG++G+FLSSSLGRWQNR SN DRGLI AFKTIATMS+RLG
Sbjct: 61  GPTNPLLADSALTTVIAKPNGSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANE+YKR+EDQKSSRGRNQDAL AACLYIACRQEDKPRT+KEIC +ANGATK
Sbjct: 121 LVATIKDRANELYKRLEDQKSSRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAK+YIVK LGLE GQSV++GTIHAG+FMRRFCSNL M+N AVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKDYIVKTLGLEPGQSVDLGTIHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAA VIYIITQLSDDKK LKDIS ATGVAEGTIRNSYKDLYPH+SKI P WY
Sbjct: 241 DIRRSPISIAAVVIYIITQLSDDKKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNL SP
Sbjct: 301 AKEEDLKNLSSP 312

[Close]

BLAST of CmaCh07G013340 vs. ExPASy Swiss-Prot
Match: Q9LIA6 (Plant-specific TFIIB-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=PBRP2 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.4e-64
Identity = 141/319 (44.20%), Postives = 197/319 (61.76%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANES--GDNDPVR 60
           M +  C DCKR T +V DHS GDT+ SECGLVLE+H I+ + EWRTFA++    D DP R
Sbjct: 1   MEEETCLDCKRPTIMVVDHSSGDTICSECGLVLEAHIIEYSQEWRTFASDDNHSDRDPNR 60

Query: 61  VGGPSNPLLADGGLSTVIAKPNGTAGEFLS----SSLGRWQNRGSNPDRGLI-LAFKTIA 120
           VG  +NP L  G L T+I KP  TA   LS    S+L R  N+  N +  LI  AF+ I 
Sbjct: 61  VGAATNPFLKSGDLVTIIEKPKETASSVLSKDDISTLFRAHNQVKNHEEDLIKQAFEEIQ 120

Query: 121 TMSDRLGLVATIKDRANEIYKRVE---DQKSSRGRNQDALLAACLYIACRQEDKPRTVKE 180
            M+D L L   I  RA EI  + +   + K  RG+  +A+ AA +  ACR+    RT+KE
Sbjct: 121 RMTDALDLDIVINSRACEIVSKYDGHANTKLRRGKKLNAICAASVSTACRELQLSRTLKE 180

Query: 181 ICSVANGATKKEIGRAKEYIVKQL--GLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVK 240
           I  VANG  KK+I R +  ++K++    +T  S     I+ G  +RRFCS L ++ + + 
Sbjct: 181 IAEVANGVDKKDI-RKESLVIKRVLESHQTSVSASQAIINTGELVRRFCSKLDISQREIM 240

Query: 241 AAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSD-DKKPLKDISVATGVAEGTIRNSYKD 300
           A  EAV+K+E FDIRR+P S+ AA+I++I+ +S  ++KP+++I +   V E TI+NS KD
Sbjct: 241 AIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPIREIGIVAEVVENTIKNSVKD 300

Query: 301 LYPHVSKIIPGWYAKEEDL 307
           +YP+  KIIP WYA E D+
Sbjct: 301 MYPYALKIIPNWYACESDI 318

[Close]

BLAST of CmaCh07G013340 vs. ExPASy TrEMBL
Match: A0A6J1HTP5 (transcription initiation factor IIB-2-like OS=Cucurbita maxima OX=3661 GN=LOC111466060 PE=3 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 1.2e-175
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLCSP
Sbjct: 301 AKEEDLKNLCSP 312

[Close]

BLAST of CmaCh07G013340 vs. ExPASy TrEMBL
Match: A0A6J1EAJ6 (transcription initiation factor IIB-2-like OS=Cucurbita moschata OX=3662 GN=LOC111432315 PE=3 SV=1)

HSP 1 Score: 615.9 bits (1587), Expect = 9.1e-173
Identity = 308/312 (98.72%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQSVEMGTIHAG+FMRRFCSNLGMNNQAVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLCSP
Sbjct: 301 AKEEDLKNLCSP 312

[Close]

BLAST of CmaCh07G013340 vs. ExPASy TrEMBL
Match: A0A6J1HVL0 (transcription initiation factor IIB-2 OS=Cucurbita maxima OX=3661 GN=LOC111467238 PE=3 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 4.5e-172
Identity = 306/312 (98.08%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLLADGGLSTVIAKPNGT+GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGTSGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQSVEMGTIHAG+FMRRFCSNLGMNNQAVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLCSP
Sbjct: 301 AKEEDLKNLCSP 312

[Close]

BLAST of CmaCh07G013340 vs. ExPASy TrEMBL
Match: A0A6J1DFL4 (transcription initiation factor IIB-2 OS=Momordica charantia OX=3673 GN=LOC111019998 PE=3 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 4.5e-172
Identity = 306/312 (98.08%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLLADGGLSTVIAKPNGT+GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGTSGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQSVEMGTIHAG+FMRRFCSNLGMNNQAVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLCSP
Sbjct: 301 AKEEDLKNLCSP 312

[Close]

BLAST of CmaCh07G013340 vs. ExPASy TrEMBL
Match: A0A6J1EKQ3 (transcription initiation factor IIB-2 OS=Cucurbita moschata OX=3662 GN=LOC111435544 PE=3 SV=1)

HSP 1 Score: 613.6 bits (1581), Expect = 4.5e-172
Identity = 306/312 (98.08%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLLADGGLSTVIAKPNGT+GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGTSGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQSVEMGTIHAG+FMRRFCSNLGMNNQAVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLCSP
Sbjct: 301 AKEEDLKNLCSP 312

[Close]

BLAST of CmaCh07G013340 vs. NCBI nr
Match: XP_022966399.1 (transcription initiation factor IIB-2-like [Cucurbita maxima])

HSP 1 Score: 625.5 bits (1612), Expect = 2.4e-175
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLCSP
Sbjct: 301 AKEEDLKNLCSP 312

[Close]

BLAST of CmaCh07G013340 vs. NCBI nr
Match: XP_022924909.1 (transcription initiation factor IIB-2-like [Cucurbita moschata] >XP_023518635.1 transcription initiation factor IIB-2-like [Cucurbita pepo subsp. pepo] >KAG6595678.1 Transcription initiation factor IIB-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 615.9 bits (1587), Expect = 1.9e-172
Identity = 308/312 (98.72%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQSVEMGTIHAG+FMRRFCSNLGMNNQAVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLCSP
Sbjct: 301 AKEEDLKNLCSP 312

[Close]

BLAST of CmaCh07G013340 vs. NCBI nr
Match: XP_022152227.1 (transcription initiation factor IIB-2 [Momordica charantia] >XP_022928717.1 transcription initiation factor IIB-2 [Cucurbita moschata] >XP_022967855.1 transcription initiation factor IIB-2 [Cucurbita maxima] >XP_023544538.1 transcription initiation factor IIB-2 [Cucurbita pepo subsp. pepo] >KAG6603201.1 Transcription initiation factor IIB-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 613.6 bits (1581), Expect = 9.4e-172
Identity = 306/312 (98.08%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLLADGGLSTVIAKPNGT+GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGTSGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQSVEMGTIHAG+FMRRFCSNLGMNNQAVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLCSP
Sbjct: 301 AKEEDLKNLCSP 312

[Close]

BLAST of CmaCh07G013340 vs. NCBI nr
Match: XP_004150610.1 (transcription initiation factor IIB-2 [Cucumis sativus] >XP_008455781.1 PREDICTED: transcription initiation factor IIB-2 [Cucumis melo] >KAA0043603.1 transcription initiation factor IIB-2-like [Cucumis melo var. makuwa] >KGN54643.1 hypothetical protein Csa_012330 [Cucumis sativus] >TYK29758.1 transcription initiation factor IIB-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 612.5 bits (1578), Expect = 2.1e-171
Identity = 305/312 (97.76%), Postives = 309/312 (99.04%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLLADGGLSTVIAKPNGT GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQSVEMGTIHAG+FMRRFCSNLGMNNQAVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKI+PGWY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKILPGWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLCSP
Sbjct: 301 AKEEDLKNLCSP 312

[Close]

BLAST of CmaCh07G013340 vs. NCBI nr
Match: XP_028766652.1 (transcription initiation factor IIB-2 [Prosopis alba])

HSP 1 Score: 607.1 bits (1564), Expect = 8.8e-170
Identity = 303/312 (97.12%), Postives = 306/312 (98.08%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLLADGGLSTVIAKPNG  GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGATGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLE GQSVEMGTIHAG+FMRRFCSNLGMNNQAVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLENGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIP WY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPAWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNLCSP
Sbjct: 301 AKEEDLKNLCSP 312

[Close]

BLAST of CmaCh07G013340 vs. TAIR 10
Match: AT3G10330.1 (Cyclin-like family protein )

HSP 1 Score: 586.3 bits (1510), Expect = 1.5e-167
Identity = 290/312 (92.95%), Postives = 304/312 (97.44%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKR TEVVFDHS GDT+ SECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLLADGGL+TVI+KPNG++G+FLSSSLGRWQNRGSNPDRGLI+AFKTIATM+DRLG
Sbjct: 61  GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAKEYIVKQLGLETGQ VEMGTIHAG+FMRRFCSNLGM NQ VKAAQE+VQKSEEF
Sbjct: 181 KEIGRAKEYIVKQLGLETGQLVEMGTIHAGDFMRRFCSNLGMTNQTVKAAQESVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAAAVIYIITQLSD+KKPL+DISVATGVAEGTIRNSYKDLYPH+SKIIP WY
Sbjct: 241 DIRRSPISIAAAVIYIITQLSDEKKPLRDISVATGVAEGTIRNSYKDLYPHLSKIIPAWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNL SP
Sbjct: 301 AKEEDLKNLQSP 312

[Close]

BLAST of CmaCh07G013340 vs. TAIR 10
Match: AT2G41630.1 (transcription factor IIB )

HSP 1 Score: 541.2 bits (1393), Expect = 5.5e-154
Identity = 266/312 (85.26%), Postives = 290/312 (92.95%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDA+C+DCK++TE+V DHS GDT+ SECGLVLESHSIDETSEWRTFANES ++DP RVG
Sbjct: 1   MSDAYCTDCKKETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVG 60

Query: 61  GPSNPLLADGGLSTVIAKPNGTAGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GP+NPLLAD  L+TVIAKPNG++G+FLSSSLGRWQNR SN DRGLI AFKTIATMS+RLG
Sbjct: 61  GPTNPLLADSALTTVIAKPNGSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATK 180
           LVATIKDRANE+YKR+EDQKSSRGRNQDAL AACLYIACRQEDKPRT+KEIC +ANGATK
Sbjct: 121 LVATIKDRANELYKRLEDQKSSRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGATK 180

Query: 181 KEIGRAKEYIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF 240
           KEIGRAK+YIVK LGLE GQSV++GTIHAG+FMRRFCSNL M+N AVKAAQEAVQKSEEF
Sbjct: 181 KEIGRAKDYIVKTLGLEPGQSVDLGTIHAGDFMRRFCSNLAMSNHAVKAAQEAVQKSEEF 240

Query: 241 DIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWY 300
           DIRRSPISIAA VIYIITQLSDDKK LKDIS ATGVAEGTIRNSYKDLYPH+SKI P WY
Sbjct: 241 DIRRSPISIAAVVIYIITQLSDDKKTLKDISHATGVAEGTIRNSYKDLYPHLSKIAPSWY 300

Query: 301 AKEEDLKNLCSP 313
           AKEEDLKNL SP
Sbjct: 301 AKEEDLKNLSSP 312

[Close]

BLAST of CmaCh07G013340 vs. TAIR 10
Match: AT3G29380.1 (Cyclin-like family protein )

HSP 1 Score: 248.1 bits (632), Expect = 9.6e-66
Identity = 141/319 (44.20%), Postives = 197/319 (61.76%), Query Frame = 0


Query: 1   MSDAFCSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANES--GDNDPVR 60
           M +  C DCKR T +V DHS GDT+ SECGLVLE+H I+ + EWRTFA++    D DP R
Sbjct: 1   MEEETCLDCKRPTIMVVDHSSGDTICSECGLVLEAHIIEYSQEWRTFASDDNHSDRDPNR 60

Query: 61  VGGPSNPLLADGGLSTVIAKPNGTAGEFLS----SSLGRWQNRGSNPDRGLI-LAFKTIA 120
           VG  +NP L  G L T+I KP  TA   LS    S+L R  N+  N +  LI  AF+ I 
Sbjct: 61  VGAATNPFLKSGDLVTIIEKPKETASSVLSKDDISTLFRAHNQVKNHEEDLIKQAFEEIQ 120

Query: 121 TMSDRLGLVATIKDRANEIYKRVE---DQKSSRGRNQDALLAACLYIACRQEDKPRTVKE 180
            M+D L L   I  RA EI  + +   + K  RG+  +A+ AA +  ACR+    RT+KE
Sbjct: 121 RMTDALDLDIVINSRACEIVSKYDGHANTKLRRGKKLNAICAASVSTACRELQLSRTLKE 180

Query: 181 ICSVANGATKKEIGRAKEYIVKQL--GLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVK 240
           I  VANG  KK+I R +  ++K++    +T  S     I+ G  +RRFCS L ++ + + 
Sbjct: 181 IAEVANGVDKKDI-RKESLVIKRVLESHQTSVSASQAIINTGELVRRFCSKLDISQREIM 240

Query: 241 AAQEAVQKSEEFDIRRSPISIAAAVIYIITQLSD-DKKPLKDISVATGVAEGTIRNSYKD 300
           A  EAV+K+E FDIRR+P S+ AA+I++I+ +S  ++KP+++I +   V E TI+NS KD
Sbjct: 241 AIPEAVEKAENFDIRRNPKSVLAAIIFMISHISQTNRKPIREIGIVAEVVENTIKNSVKD 300

Query: 301 LYPHVSKIIPGWYAKEEDL 307
           +YP+  KIIP WYA E D+
Sbjct: 301 MYPYALKIIPNWYACESDI 318

[Close]

BLAST of CmaCh07G013340 vs. TAIR 10
Match: AT3G57370.1 (Cyclin family protein )

HSP 1 Score: 171.0 bits (432), Expect = 1.5e-42
Identity = 124/365 (33.97%), Postives = 182/365 (49.86%), Query Frame = 0


Query: 6   CSDCKRQTEVVFDHSPGDTMRSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPSNP 65
           C  CK Q  VV DH    T    CGL  +   I + S          +ND VR+  P+N 
Sbjct: 9   CRRCK-QINVVTDHVTRRTRCFGCGLEFKYRPIGDLS-------PVAENDTVRLPDPTNT 68

Query: 66  LLADGGLSTVI-------------------AKP-------------NGTAGEFLS----- 125
           LL++  LS V                    +KP             NG++ +FLS     
Sbjct: 69  LLSNTDLSIVTTEHKNGSFDDSLSLNLGNSSKPRLDPVSIATAKLMNGSSNDFLSLGTSQ 128

Query: 126 --------------SSLGRWQNRGSNP------DRGLILAFKTIATMSDRLGLVATIKDR 185
                         S LG  Q    +P           L+  +I  +S+ L L ATIK +
Sbjct: 129 NSETITASSDEFLFSDLGHLQKFSFDPLSMASTKPNKALSIVSIEAISNGLKLPATIKGQ 188

Query: 186 ANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGATKKEIGRAKE 245
           ANEI+K VE    +RG+ ++ L AAC+YIACR  D  RT++EI   AN A+  +I     
Sbjct: 189 ANEIFKVVESY--ARGKERNVLFAACIYIACRDNDMTRTMREISRFANKASISDISETVG 248

Query: 246 YIVKQLGLETGQSVEMGTIHAGNFMRRFCSNLGMNNQAVKAAQEAVQKSEEF-DIRRSPI 305
           +I ++L +     +   +I   NF++RFCS   ++ +AV+AA EA +  +   + RR+P+
Sbjct: 249 FIAEKLEINKNWYM---SIETANFIKRFCSIFRLDKEAVEAALEAAESYDYMTNGRRAPV 308

Query: 306 SIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRNSYKDLYPHVSKIIPGWYAKEEDLK 313
           S+AA ++Y+I +LS +K  LK +  ATGVAE TI+ +Y DLYP++  I+P W+A   DLK
Sbjct: 309 SVAAGIVYVIARLSYEKHLLKGLIEATGVAENTIKGTYGDLYPNLPTIVPTWFANANDLK 360

[Close]

BLAST of CmaCh07G013340 vs. TAIR 10
Match: AT4G36650.1 (plant-specific TFIIB-related protein )

HSP 1 Score: 96.7 bits (239), Expect = 3.6e-20
Identity = 68/197 (34.52%), Postives = 105/197 (53.30%), Query Frame = 0


Query: 108 AFKTIATMSDRLGLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRT 167
           A+  I  ++  LGL   I + A ++++        R R+ +AL  ACL  A R+  +PRT
Sbjct: 133 AYMQIIDVASILGLDCDISEHAFQLFRDCCSATCLRNRSVEALATACLVQAIREAQEPRT 192

Query: 168 VKEICSVANGATKKEIGRAKEYIVKQLG--LETGQSVEMGTIHAGNFMRRFCSNLGMNNQ 227
           ++EI S+A    +KEIG+     +K LG  L+  Q +   +I     M RFC+ L +N  
Sbjct: 193 LQEI-SIAANVQQKEIGK----YIKILGEALQLSQPINSNSISV--HMPRFCTLLQLNKS 252

Query: 228 AVKAAQE--AVQKSEEFDIRRSPISIAAAVIYIITQLSDDKKPLKDISVATGVAEGTIRN 287
           A + A     V  ++ F  RR+PISI+AA IY+  QL D +K   +I   TG+ E T+R 
Sbjct: 253 AQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKITGLTEVTLRK 312

Query: 288 SYKDLYPHVSKIIPGWY 301
            YK+L  +   ++P  Y
Sbjct: 313 VYKELLENWDDLLPSNY 322

The following BLAST results are available for this feature:

BLAST of CmaCh07G013340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SS44	2.1e-166	92.95	Transcription initiation factor IIB-2 OS=Arabidopsis thaliana OX=3702 GN=TFIIB2 ...	[more]
P48513	2.1e-166	94.57	Transcription initiation factor IIB OS=Glycine max OX=3847 GN=TFIIB1 PE=2 SV=1	[more]
Q8W0W3	2.8e-155	85.90	Transcription initiation factor IIB OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
P48512	7.7e-153	85.26	Transcription initiation factor IIB-1 OS=Arabidopsis thaliana OX=3702 GN=TFIIB1 ...	[more]
Q9LIA6	1.4e-64	44.20	Plant-specific TFIIB-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=PBRP2 ...	[more]

BLAST of CmaCh07G013340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTP5	1.2e-175	100.00	transcription initiation factor IIB-2-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1EAJ6	9.1e-173	98.72	transcription initiation factor IIB-2-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HVL0	4.5e-172	98.08	transcription initiation factor IIB-2 OS=Cucurbita maxima OX=3661 GN=LOC11146723...	[more]
A0A6J1DFL4	4.5e-172	98.08	transcription initiation factor IIB-2 OS=Momordica charantia OX=3673 GN=LOC11101...	[more]
A0A6J1EKQ3	4.5e-172	98.08	transcription initiation factor IIB-2 OS=Cucurbita moschata OX=3662 GN=LOC111435...	[more]

BLAST of CmaCh07G013340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966399.1	2.4e-175	100.00	transcription initiation factor IIB-2-like [Cucurbita maxima]	[more]
XP_022924909.1	1.9e-172	98.72	transcription initiation factor IIB-2-like [Cucurbita moschata] >XP_023518635.1 ...	[more]
XP_022152227.1	9.4e-172	98.08	transcription initiation factor IIB-2 [Momordica charantia] >XP_022928717.1 tran...	[more]
XP_004150610.1	2.1e-171	97.76	transcription initiation factor IIB-2 [Cucumis sativus] >XP_008455781.1 PREDICTE...	[more]
XP_028766652.1	8.8e-170	97.12	transcription initiation factor IIB-2 [Prosopis alba]	[more]

BLAST of CmaCh07G013340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G10330.1	1.5e-167	92.95	Cyclin-like family protein	[more]
AT2G41630.1	5.5e-154	85.26	transcription factor IIB	[more]
AT3G29380.1	9.6e-66	44.20	Cyclin-like family protein	[more]
AT3G57370.1	1.5e-42	33.97	Cyclin family protein	[more]
AT4G36650.1	3.6e-20	34.52	plant-specific TFIIB-related protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000812	Transcription factor TFIIB	PRINTS	PR00685	TIFACTORIIB	coord: 19..39 score: 45.4 coord: 41..54 score: 50.0 coord: 212..230 score: 47.37 coord: 55..76 score: 59.7 coord: 179..194 score: 50.83 coord: 244..260 score: 60.78 coord: 152..171 score: 68.0 coord: 276..290 score: 63.11
IPR000812	Transcription factor TFIIB	PANTHER	PTHR11618	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	coord: 3..312
IPR013763	Cyclin-like	SMART	SM00385	cyclin_7	coord: 211..290 e-value: 7.6E-7 score: 38.7 coord: 110..192 e-value: 1.3E-8 score: 44.6
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 104..185 e-value: 2.47951E-13 score: 62.6412
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 207..289 e-value: 4.56996E-9 score: 50.7001
IPR013137	Zinc finger, TFIIB-type	PFAM	PF08271	TF_Zn_Ribbon	coord: 6..47 e-value: 2.6E-9 score: 36.4
None	No IPR available	GENE3D	1.10.472.170		coord: 5..193 e-value: 2.3E-61 score: 209.1
None	No IPR available	GENE3D	1.10.472.10		coord: 209..311 e-value: 3.2E-32 score: 112.7
None	No IPR available	PANTHER	PTHR11618:SF69	TRANSCRIPTION INITIATION FACTOR IIB-RELATED	coord: 3..312
None	No IPR available	SUPERFAMILY	57783	Zinc beta-ribbon	coord: 4..50
IPR013150	Transcription factor TFIIB, cyclin-like domain	PFAM	PF00382	TFIIB	coord: 213..281 e-value: 4.5E-9 score: 36.2 coord: 112..176 e-value: 2.3E-19 score: 69.2
IPR023486	Transcription factor TFIIB, conserved site	PROSITE	PS00782	TFIIB	coord: 144..159
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 105..196
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 207..308

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G013340.1	CmaCh07G013340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070897	transcription preinitiation complex assembly
biological_process	GO:0006352	DNA-templated transcription, initiation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0097550	transcription preinitiation complex
molecular_function	GO:0017025	TBP-class protein binding