CmaCh07G012650 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh07G012650
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	thioredoxin-like 3-1, chloroplastic
Location	Cma_Chr07: 7018170 .. 7020535 (-)
RNA-Seq Expression	CmaCh07G012650
Synteny	CmaCh07G012650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATAGAGGTTTTCTTACCGCTTAACTTGCTTCTAAACTTAGGGCTGCTTTCCTCCCACCGTGTCCTTCCTATGTGTCGGAGAATTGGGGCTGCCACCCCCCTGATAGAGGCAAAAGCTAGGGCTACCACCCCGGGGGGGTTGGTACCTTTCTTTTACAACCTAAATTCCTATTATTTGGTCGAACTCACAGACAAAATCGAAAGCTGCTATGCGACCTCGATTCAAAGATTGAAATACGATCCACTAGCGAATATCTACTAGAATAATATTTTTTTAAAAAGAATTAAATCTCCATATTATTTAAATTTATAATACTAAGAAATAGTGACAAAAATAAATTTGATTGGATGGATATGCCTTCCCCTCCTCCCACGTGTGGCCCCCAATTCACCCTATGGATAAGCCAAGCCCTTCCCAAAACGCTCCCATTTCAATCCCAAACCCCAAAAAACATCAAAAAAGTAAAAGAAAAACCCCCTCTTCACAGATCGAAGCCATGACCTCGTAGAGAAGAAGAAGAGAGGATCTAGAGATATGTCTGTGTTGGCTGCGAGCACTGCTCAGATTCTGTACAGCGAAGTTCATCATAATCAACACCAAATTGCGAGCAATGGGGCGAGGCGGTGTTTTGTGAACAGAGATTTTGGGTCTGTTTTATTTGGCCGGAGAAATGGAGAGCAGCGGAGGCTGCGGAGGAGGGAGTTCAGGATGGGGACGGAAGCTGGGTTTTGGCCGGATCTGTCCCGGCCGGCTATGGTGGAGATGGAGTCCATTGAGGATTCCGAGCAGCTTGATCGGATTTTGGCTCACGCCCAGGAACTGTCTCAGCCGGTTCTTATCGACTGGTTCGCATCTCTTCCTTCTTTTATCTCGAAAGGATTTAATCGTCATTTCACCCCATTAGCTTAATTAGCTTATTATTATTATTTTTAACTAAATTACTAAAATACCCTTAATTTTTTTAAAAAGTTTGAATAATATCATTTAATATTAAAAAAAATCTAAAAAAAATTTAATATTAATTTTAGATTAAAACTTTGTTTCAAATTAAAAAATATTTATTAAATTTTAAAAATAGGATTAATACTCTTTAGATTTATAAAAAAGTCTTATATAAATGAAAACTATCTATTTAAATTTTTAATATTATTTTTGAAAGTGGTATTAAAAAAAAAAAAAAAAAAAGGTGTGAGTACCTGGTTTCGTCCAAAAACCTAGAAGAAAGCGTTCTCTTTATAAGGGTGTGAAACGTTCGCCTTAGCAGAAACCCAGAAGAAGATAGTATATGCTAGCGGTGGGATTGACAAATTACAAATATACCCTTGTTCGTGGAATTAAATTAGAGTGTGTTAGTTATTTATGTAATTAAATTGAAATAAAATAAGGGTGTATAAATATTATTAATGGAATATTTGGAATGAATGGGGAATAGGATGGCAACGTGGTGTAGGAAATGCATCTACTTGAAGCCTAAATTGGAGAAACTTGGTGCTGATTATCTTACCAAGTAACATTTATTATTTATTTTATTTTAACATTTTATTTATTTAATTTAATTATTTTAATTATTTACTAACTTTTCTCAATAAAATTAAATATTTTTGCAGAGTGAAATTTTACTATGTGGATGTGAATAAGGTCCCTCAATCTCTAGTTAAACGTGGAAACATCTCTGTAAGTATTTTTATATTTTTTTTTTTTACTTATCCTTTTCATTTTTTAAGCTATTAATTTATATATTTTCTATTATGCAGAAAATGCCAACAATTCAGGTGATCTATTTTATTTTTTAAATTTTAGATTATCGATGTCATTTCAACCTTAAATAGTTTCGGGTGTTGGTTTTACGTTCTTAAAATCGTTTGAAAGTGTTTTTTGATGAAACTCTCGGGTCAAAAGCTTTTCTAGAAGTGCTTTCTCGCGAAACATTTTGAATATTTGACTCTCGTTGAGTAGTTCTTTATTATTTTCGAGTCTTGTTGAGTAACTTGAAACGCTGTTCGACTTTTTACGTCGAGAGAGGGACAAATAAGGTGTTTGAAATTTGTTGTAAAATTACTTTTTTTTAGCTTTGGAAGGATGGAGAAATGAAAGCGGAAGTGATTGGAGGGCATAAAGCTTGGCTTGTGATCGAAGAAGTTAGAGAAATGATTCATAAGTTTATTTTATAATCGAGTTCGAGTTCCACACGAGAAGCACGTTCCTCATTCTGTTCGGTTGTTCAATCTCTAGGCAATGGTTCTTAAGACTTCATGATTTTCGTTTATATGTTTTTATCTTCTGAAAATTTAATGTACATATATTATAAAAAAAAATGTCAATATTGATGAAAATGTTATATGCAAATATATGATATGCTGAC

mRNA sequence

ATGGATAGAGATCGAAGCCATGACCTCGTAGAGAAGAAGAAGAGAGGATCTAGAGATATGTCTGTGTTGGCTGCGAGCACTGCTCAGATTCTGTACAGCGAAGTTCATCATAATCAACACCAAATTGCGAGCAATGGGGCGAGGCGGTGTTTTGTGAACAGAGATTTTGGGTCTGTTTTATTTGGCCGGAGAAATGGAGAGCAGCGGAGGCTGCGGAGGAGGGAGTTCAGGATGGGGACGGAAGCTGGGTTTTGGCCGGATCTGTCCCGGCCGGCTATGGTGGAGATGGAGTCCATTGAGGATTCCGAGCAGCTTGATCGGATTTTGGCTCACGCCCAGGAACTGTCTCAGCCGGTTCTTATCGACTGGATGGCAACGTGGTGTAGGAAATGCATCTACTTGAAGCCTAAATTGGAGAAACTTGGTGCTGATTATCTTACCAAAGTGAAATTTTACTATGTGGATGTGAATAAGGTCCCTCAATCTCTAGTTAAACGTGGAAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAGGATGGAGAAATGAAAGCGGAAGTGATTGGAGGGCATAAAGCTTGGCTTGTGATCGAAGAAGTTAGAGAAATGATTCATAAGTTTATTTTATAATCGAGTTCGAGTTCCACACGAGAAGCACGTTCCTCATTCTGTTCGGTTGTTCAATCTCTAGGCAATGGTTCTTAAGACTTCATGATTTTCGTTTATATGTTTTTATCTTCTGAAAATTTAATGTACATATATTATAAAAAAAAATGTCAATATTGATGAAAATGTTATATGCAAATATATGATATGCTGAC

Coding sequence (CDS)

ATGGATAGAGATCGAAGCCATGACCTCGTAGAGAAGAAGAAGAGAGGATCTAGAGATATGTCTGTGTTGGCTGCGAGCACTGCTCAGATTCTGTACAGCGAAGTTCATCATAATCAACACCAAATTGCGAGCAATGGGGCGAGGCGGTGTTTTGTGAACAGAGATTTTGGGTCTGTTTTATTTGGCCGGAGAAATGGAGAGCAGCGGAGGCTGCGGAGGAGGGAGTTCAGGATGGGGACGGAAGCTGGGTTTTGGCCGGATCTGTCCCGGCCGGCTATGGTGGAGATGGAGTCCATTGAGGATTCCGAGCAGCTTGATCGGATTTTGGCTCACGCCCAGGAACTGTCTCAGCCGGTTCTTATCGACTGGATGGCAACGTGGTGTAGGAAATGCATCTACTTGAAGCCTAAATTGGAGAAACTTGGTGCTGATTATCTTACCAAAGTGAAATTTTACTATGTGGATGTGAATAAGGTCCCTCAATCTCTAGTTAAACGTGGAAACATCTCTAAAATGCCAACAATTCAGCTTTGGAAGGATGGAGAAATGAAAGCGGAAGTGATTGGAGGGCATAAAGCTTGGCTTGTGATCGAAGAAGTTAGAGAAATGATTCATAAGTTTATTTTATAA

Protein sequence

MDRDRSHDLVEKKKRGSRDMSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMGTEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIHKFIL

Homology

[Close]

BLAST of CmaCh07G012650 vs. ExPASy Swiss-Prot
Match: Q9FG36 (Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE=2 SV=3)

HSP 1 Score: 204.5 bits (519), Expect = 1.2e-51
Identity = 103/190 (54.21%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 25  ASTAQILYSEVHHNQ-----HQIASNGARRC-FVNRDFGSVLFGRRNGEQRRLRRREFRM 84
           AS  Q+L  + H N+      + + N  ++C F    + +   GR + E      +E+R+
Sbjct: 30  ASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEKLGRSHME------KEWRL 89

Query: 85  GTEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKL 144
                FW ++++P  +EME I + E+LD +L+HA++LSQP++I+WMA+WCRKCIYLKPKL
Sbjct: 90  ---KAFWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKL 149

Query: 145 EKLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIE 204
           EKL A+Y  + KFYYVDVNKVPQ+LVKRGNISKMPTIQLWK+ EMK EVIGGHK WLVIE
Sbjct: 150 EKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIE 209

Query: 205 EVREMIHKFI 209
           EVRE+I+KF+
Sbjct: 210 EVRELINKFV 210

[Close]

BLAST of CmaCh07G012650 vs. ExPASy Swiss-Prot
Match: Q6Z7L3 (Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0774100 PE=3 SV=2)

HSP 1 Score: 179.9 bits (455), Expect = 3.0e-44
Identity = 90/145 (62.07%), Postives = 112/145 (77.24%), Query Frame = 0


Query: 62  GRRNGEQRRLRRREFRMGTEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLI 121
           G   G+ RR  R +  +  EA FW D+S+P  VEME I+  E+LD  L  + E  QP++I
Sbjct: 51  GGGGGKGRRRERGDGMLRAEAYFW-DVSKP--VEMEEIDSMEKLDDALRWSVENKQPIII 110

Query: 122 DWMATWCRKCIYLKPKLEKLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDG 181
           DWMA+WCRKCIYLKP+LEK+  ++   V+FY+VDVNKVPQ++VKRGNI+KMPTIQLWKDG
Sbjct: 111 DWMASWCRKCIYLKPRLEKIAGEF-PGVRFYFVDVNKVPQTVVKRGNITKMPTIQLWKDG 170

Query: 182 EMKAEVIGGHKAWLVIEEVREMIHK 207
           E  AEVIGGHKAWLV++EVREMI K
Sbjct: 171 EWAAEVIGGHKAWLVMDEVREMIQK 191

[Close]

BLAST of CmaCh07G012650 vs. ExPASy Swiss-Prot
Match: Q8VZT6 (Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE=2 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 4.9e-34
Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 91  PAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLGADYLTKVK 150
           P  VE+  I      D+++  AQ+L + V+I WMA WCRKCIYLKPKLEKL A++  +++
Sbjct: 73  PVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLR 132

Query: 151 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI 205
           FY+VDVN VP  LV R  ++KMPTIQLW+DG+ +AEVIGGHKA  V+ EVREMI
Sbjct: 133 FYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMI 186

[Close]

BLAST of CmaCh07G012650 vs. ExPASy Swiss-Prot
Match: Q9SEU6 (Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 SV=2)

HSP 1 Score: 64.3 bits (155), Expect = 1.9e-09
Identity = 36/118 (30.51%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 92  AMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLGADYLTKVKF 151
           A VE+ ++ DSE   ++L    E   PVL+++ A WC  C  + P +++L  D+  K KF
Sbjct: 84  AAVEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKF 143

Query: 152 YYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIHKFIL 210
           Y ++ ++ P +   R  I  +PT+ ++K GE K  +IG     +  E + + I +F++
Sbjct: 144 YKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIGA----VPRETLEKTIERFLV 192

[Close]

BLAST of CmaCh07G012650 vs. ExPASy Swiss-Prot
Match: P80028 (Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3)

HSP 1 Score: 63.2 bits (152), Expect = 4.1e-09
Identity = 32/91 (35.16%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 99  IEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLGADYLTKVKFYYVDVNK 158
           I+     D  LA  +E  +P+++D+ ATWC  C  + P  E L  DY  KV F  VDV+ 
Sbjct: 8   IDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYAGKVIFLKVDVDA 67

Query: 159 VPQSLVKRGNISKMPTIQLWKDGEMKAEVIG 190
           V  ++ +   I+ MPT  ++KDG    +++G
Sbjct: 68  V-AAVAEAAGITAMPTFHVYKDGVKADDLVG 97

[Close]

BLAST of CmaCh07G012650 vs. ExPASy TrEMBL
Match: A0A6J1HTV8 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.5e-104
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 20  MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 79
           MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 80  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 139
           TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 140 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 199
           KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 200 VREMIHKFIL 210
           VREMIHKFIL
Sbjct: 181 VREMIHKFIL 190

[Close]

BLAST of CmaCh07G012650 vs. ExPASy TrEMBL
Match: A0A6J1EDU4 (thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111432326 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 2.0e-99
Identity = 181/190 (95.26%), Postives = 184/190 (96.84%), Query Frame = 0


Query: 20  MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 79
           MSVLAA+TAQILYSE HHNQHQI SNG RRCFVNRDFGSVLFGRRNGE+RRLRRRE +MG
Sbjct: 1   MSVLAATTAQILYSEAHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 80  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 139
            EAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 140 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 199
           KL ADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 200 VREMIHKFIL 210
           VREMIHKFIL
Sbjct: 181 VREMIHKFIL 190

[Close]

BLAST of CmaCh07G012650 vs. ExPASy TrEMBL
Match: A0A1S3B504 (thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.1e-73
Identity = 144/188 (76.60%), Postives = 156/188 (82.98%), Query Frame = 0


Query: 20  MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 79
           M VL AS++ ILY+++H  QHQ  SNG R  F+N DFG              RRRE R+ 
Sbjct: 1   MYVLGASSSHILYAQLH--QHQFLSNGKRCGFLNTDFGD------------HRRRELRIK 60

Query: 80  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 139
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ+LSQP+LIDWMATWCRKCIYLKPKLE
Sbjct: 61  AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQQLSQPILIDWMATWCRKCIYLKPKLE 120

Query: 140 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 199
           KL ADY+TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 174

Query: 200 VREMIHKF 208
           VREMI KF
Sbjct: 181 VREMIQKF 174

[Close]

BLAST of CmaCh07G012650 vs. ExPASy TrEMBL
Match: A0A0A0KZ53 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496780 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.4e-71
Identity = 141/188 (75.00%), Postives = 151/188 (80.32%), Query Frame = 0


Query: 20  MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 79
           MSVL AST+ ILY  +H  QH   +N  R  F++ DFG              RRRE R+ 
Sbjct: 1   MSVLGASTSHILYPPLH--QHHFLTNAKRCSFLSTDFGD------------HRRRELRIK 60

Query: 80  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 139
            EAGFWPDLSRPA VEMESI+DS+QLDRIL HAQ LSQP+LIDWMATWCRKCIYLKPKLE
Sbjct: 61  AEAGFWPDLSRPASVEMESIDDSDQLDRILIHAQHLSQPILIDWMATWCRKCIYLKPKLE 120

Query: 140 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 199
           KL ADY+TK KFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYVTKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 174

Query: 200 VREMIHKF 208
           VREMI KF
Sbjct: 181 VREMIQKF 174

[Close]

BLAST of CmaCh07G012650 vs. ExPASy TrEMBL
Match: A0A6J1E1K1 (thioredoxin-like 3-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111025584 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.8e-68
Identity = 143/191 (74.87%), Postives = 155/191 (81.15%), Query Frame = 0


Query: 20  MSVLAASTAQILYSEVHH-NQHQIASNGARR-CFVNRDFGSVLFGRRNGEQRRLRRREFR 79
           MS+LAAS +QI+Y EVHH +  QIAS G+   CFVN + GS LF RR  +    RRRE R
Sbjct: 1   MSILAAS-SQIVYREVHHRDPQQIASTGSGNCCFVNTNCGSPLFHRRIQD----RRRELR 60

Query: 80  MGTEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPK 139
              EAGFWPDLSRPA  EM  I DS+ LDRIL  A++ SQPVLIDWMATWCRKCIYLKPK
Sbjct: 61  --AEAGFWPDLSRPAAEEMAPIHDSDHLDRILLQARDQSQPVLIDWMATWCRKCIYLKPK 120

Query: 140 LEKLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 199
           LEKL ADY+ K KFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI
Sbjct: 121 LEKLAADYVAKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVI 180

Query: 200 EEVREMIHKFI 209
           EEVREMI KF+
Sbjct: 181 EEVREMIQKFV 184

[Close]

BLAST of CmaCh07G012650 vs. NCBI nr
Match: XP_022966464.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita maxima])

HSP 1 Score: 387.5 bits (994), Expect = 7.3e-104
Identity = 190/190 (100.00%), Postives = 190/190 (100.00%), Query Frame = 0


Query: 20  MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 79
           MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG
Sbjct: 1   MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 60

Query: 80  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 139
           TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 140 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 199
           KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 200 VREMIHKFIL 210
           VREMIHKFIL
Sbjct: 181 VREMIHKFIL 190

[Close]

BLAST of CmaCh07G012650 vs. NCBI nr
Match: KAG6595600.1 (Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 373.2 bits (957), Expect = 1.4e-99
Identity = 182/190 (95.79%), Postives = 185/190 (97.37%), Query Frame = 0


Query: 20  MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 79
           MSVLAA+TAQILYSEVHHNQHQI SNG RRCFVNRDFGSVLFGRRNGE+RRLRRRE +MG
Sbjct: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 80  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 139
            EAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 140 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 199
           KL ADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 200 VREMIHKFIL 210
           VREMIHKFIL
Sbjct: 181 VREMIHKFIL 190

[Close]

BLAST of CmaCh07G012650 vs. NCBI nr
Match: XP_022924923.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita moschata])

HSP 1 Score: 371.7 bits (953), Expect = 4.1e-99
Identity = 181/190 (95.26%), Postives = 184/190 (96.84%), Query Frame = 0


Query: 20  MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 79
           MSVLAA+TAQILYSE HHNQHQI SNG RRCFVNRDFGSVLFGRRNGE+RRLRRRE +MG
Sbjct: 1   MSVLAATTAQILYSEAHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRRELKMG 60

Query: 80  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 139
            EAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  PEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 140 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 199
           KL ADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 200 VREMIHKFIL 210
           VREMIHKFIL
Sbjct: 181 VREMIHKFIL 190

[Close]

BLAST of CmaCh07G012650 vs. NCBI nr
Match: XP_023517975.1 (thioredoxin-like 3-1, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.3 bits (952), Expect = 5.4e-99
Identity = 180/189 (95.24%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 20  MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 79
           MSVLAA+TAQILYSEVHHNQHQI SNG RRCFVNRDFGSVLFGRRNGE+RRLRRREFRMG
Sbjct: 1   MSVLAATTAQILYSEVHHNQHQIPSNGGRRCFVNRDFGSVLFGRRNGERRRLRRREFRMG 60

Query: 80  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 139
           TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE
Sbjct: 61  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 120

Query: 140 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 199
           KL ADYLTK KFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYLTKAKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 180

Query: 200 VREMIHKFI 209
           V+EMI KF+
Sbjct: 181 VKEMIQKFV 189

[Close]

BLAST of CmaCh07G012650 vs. NCBI nr
Match: XP_038883417.1 (thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 290.8 bits (743), Expect = 9.3e-75
Identity = 146/189 (77.25%), Postives = 163/189 (86.24%), Query Frame = 0


Query: 20  MSVLAASTAQILYSEVHHNQHQIASNGARRCFVNRDFGSVLFGRRNGEQRRLRRREFRMG 79
           MSVL A+++QILY ++H  QHQI S G +RCF+N DFG +      G+Q   RRRE R+ 
Sbjct: 1   MSVLGANSSQILYRQLH--QHQILSTG-KRCFLNTDFGLL------GDQ---RRRELRIK 60

Query: 80  TEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLE 139
            EAGFWPDLSRPA VEMESI+DS+ LDRIL H+Q+LSQP+LIDWMATWCRKCIYLKPKLE
Sbjct: 61  AEAGFWPDLSRPAAVEMESIDDSDHLDRILIHSQQLSQPILIDWMATWCRKCIYLKPKLE 120

Query: 140 KLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 199
           KL ADY+TKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE
Sbjct: 121 KLAADYVTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEE 177

Query: 200 VREMIHKFI 209
           VREMI KF+
Sbjct: 181 VREMIQKFV 177

[Close]

BLAST of CmaCh07G012650 vs. TAIR 10
Match: AT5G06690.1 (WCRKC thioredoxin 1 )

HSP 1 Score: 204.5 bits (519), Expect = 8.2e-53
Identity = 103/190 (54.21%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 25  ASTAQILYSEVHHNQ-----HQIASNGARRC-FVNRDFGSVLFGRRNGEQRRLRRREFRM 84
           AS  Q+L  + H N+      + + N  ++C F    + +   GR + E      +E+R+
Sbjct: 30  ASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEKLGRSHME------KEWRL 89

Query: 85  GTEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKL 144
                FW ++++P  +EME I + E+LD +L+HA++LSQP++I+WMA+WCRKCIYLKPKL
Sbjct: 90  ---KAFWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKL 149

Query: 145 EKLGADYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIE 204
           EKL A+Y  + KFYYVDVNKVPQ+LVKRGNISKMPTIQLWK+ EMK EVIGGHK WLVIE
Sbjct: 150 EKLAAEYNNRAKFYYVDVNKVPQTLVKRGNISKMPTIQLWKEDEMKEEVIGGHKGWLVIE 209

Query: 205 EVREMIHKFI 209
           EVRE+I+KF+
Sbjct: 210 EVRELINKFV 210

[Close]

BLAST of CmaCh07G012650 vs. TAIR 10
Match: AT5G04260.1 (WCRKC thioredoxin 2 )

HSP 1 Score: 146.0 bits (367), Expect = 3.4e-35
Identity = 66/114 (57.89%), Postives = 85/114 (74.56%), Query Frame = 0


Query: 91  PAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLGADYLTKVK 150
           P  VE+  I      D+++  AQ+L + V+I WMA WCRKCIYLKPKLEKL A++  +++
Sbjct: 73  PVSVELGPICGESHFDQVMEDAQKLGESVVIVWMAAWCRKCIYLKPKLEKLAAEFYPRLR 132

Query: 151 FYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMI 205
           FY+VDVN VP  LV R  ++KMPTIQLW+DG+ +AEVIGGHKA  V+ EVREMI
Sbjct: 133 FYHVDVNAVPYRLVSRAGVTKMPTIQLWRDGQKQAEVIGGHKAHFVVNEVREMI 186

[Close]

BLAST of CmaCh07G012650 vs. TAIR 10
Match: AT5G06690.2 (WCRKC thioredoxin 1 )

HSP 1 Score: 137.9 bits (346), Expect = 9.4e-33
Identity = 72/152 (47.37%), Postives = 103/152 (67.76%), Query Frame = 0


Query: 25  ASTAQILYSEVHHNQ-----HQIASNGARRC-FVNRDFGSVLFGRRNGEQRRLRRREFRM 84
           AS  Q+L  + H N+      + + N  ++C F    + +   GR + E      +E+R+
Sbjct: 30  ASNPQMLTRQAHGNKKEQLWRKESLNLEKKCGFCVSVYSNEKLGRSHME------KEWRL 89

Query: 85  GTEAGFWPDLSRPAMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKL 144
                FW ++++P  +EME I + E+LD +L+HA++LSQP++I+WMA+WCRKCIYLKPKL
Sbjct: 90  ---KAFWSNIAQPTTLEMEPINNVEELDAVLSHARQLSQPIIIEWMASWCRKCIYLKPKL 149

Query: 145 EKLGADYLTKVKFYYVDVNKVPQSLVKRGNIS 171
           EKL A+Y  + KFYYVDVNKVPQ+LVKRGNIS
Sbjct: 150 EKLAAEYNNRAKFYYVDVNKVPQTLVKRGNIS 172

[Close]

BLAST of CmaCh07G012650 vs. TAIR 10
Match: AT3G15360.1 (thioredoxin M-type 4 )

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-10
Identity = 36/118 (30.51%), Postives = 65/118 (55.08%), Query Frame = 0


Query: 92  AMVEMESIEDSEQLDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLGADYLTKVKF 151
           A VE+ ++ DSE   ++L    E   PVL+++ A WC  C  + P +++L  D+  K KF
Sbjct: 84  AAVEVPNLSDSEWQTKVL----ESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDFAGKFKF 143

Query: 152 YYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREMIHKFIL 210
           Y ++ ++ P +   R  I  +PT+ ++K GE K  +IG     +  E + + I +F++
Sbjct: 144 YKINTDESPNT-ANRYGIRSVPTVIIFKGGEKKDSIIGA----VPRETLEKTIERFLV 192

[Close]

BLAST of CmaCh07G012650 vs. TAIR 10
Match: AT1G76760.1 (thioredoxin Y1 )

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-07
Identity = 34/121 (28.10%), Postives = 55/121 (45.45%), Query Frame = 0


Query: 85  WPDLSRPAMVEMESIEDSEQ-LDRILAHAQELSQPVLIDWMATWCRKCIYLKPKLEKLGA 144
           +P LS         IE  +Q  D          +PVL+D+ ATWC  C ++ P L ++  
Sbjct: 49  FPSLSSTTRCTPRRIEAKKQTFDSFEDLLVNSDKPVLVDYYATWCGPCQFMVPILNEVSE 108

Query: 145 DYLTKVKFYYVDVNKVPQSLVKRGNISKMPTIQLWKDGEMKAEVIGGHKAWLVIEEVREM 204
               K++   +D  K P S+  +  I  +PT  L+KDGE      G   A  +I+ + + 
Sbjct: 109 TLKDKIQVVKIDTEKYP-SIANKYKIEALPTFILFKDGEPCDRFEGALTAKQLIQRIEDS 168

The following BLAST results are available for this feature:

BLAST of CmaCh07G012650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FG36	1.2e-51	54.21	Thioredoxin-like 3-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC1 PE...	[more]
Q6Z7L3	3.0e-44	62.07	Thioredoxin-like 3-1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q8VZT6	4.9e-34	57.89	Thioredoxin-like 3-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WCRKC2 PE...	[more]
Q9SEU6	1.9e-09	30.51	Thioredoxin M4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g15360 PE=2 ...	[more]
P80028	4.1e-09	35.16	Thioredoxin H-type OS=Chlamydomonas reinhardtii OX=3055 GN=TRXH PE=1 SV=3	[more]

BLAST of CmaCh07G012650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HTV8	3.5e-104	100.00	thioredoxin-like 3-1, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466111 ...	[more]
A0A6J1EDU4	2.0e-99	95.26	thioredoxin-like 3-1, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC11143232...	[more]
A0A1S3B504	1.1e-73	76.60	thioredoxin-like 3-1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103486084 PE=4...	[more]
A0A0A0KZ53	1.4e-71	75.00	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G496780...	[more]
A0A6J1E1K1	1.8e-68	74.87	thioredoxin-like 3-1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110255...	[more]

BLAST of CmaCh07G012650 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966464.1	7.3e-104	100.00	thioredoxin-like 3-1, chloroplastic [Cucurbita maxima]	[more]
KAG6595600.1	1.4e-99	95.79	Thioredoxin-like 3-1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022924923.1	4.1e-99	95.26	thioredoxin-like 3-1, chloroplastic [Cucurbita moschata]	[more]
XP_023517975.1	5.4e-99	95.24	thioredoxin-like 3-1, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_038883417.1	9.3e-75	77.25	thioredoxin-like 3-1, chloroplastic isoform X1 [Benincasa hispida]	[more]

BLAST of CmaCh07G012650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06690.1	8.2e-53	54.21	WCRKC thioredoxin 1	[more]
AT5G04260.1	3.4e-35	57.89	WCRKC thioredoxin 2	[more]
AT5G06690.2	9.4e-33	47.37	WCRKC thioredoxin 1	[more]
AT3G15360.1	1.3e-10	30.51	thioredoxin M-type 4	[more]
AT1G76760.1	1.4e-07	28.10	thioredoxin Y1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 89..207 e-value: 9.8E-21 score: 75.7
None	No IPR available	PANTHER	PTHR47192:SF3	THIOREDOXIN-LIKE 3-1, CHLOROPLASTIC	coord: 20..207
None	No IPR available	CDD	cd02947	TRX_family	coord: 116..204 e-value: 5.00088E-20 score: 78.754
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 115..193 e-value: 3.1E-16 score: 59.2
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 84..209 score: 9.662489
IPR044253	Thioredoxin-like 3-1/3-2	PANTHER	PTHR47192	THIOREDOXIN-LIKE 3-2, CHLOROPLASTIC	coord: 20..207
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 95..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh07G012650.1	CmaCh07G012650.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009570	chloroplast stroma